Miyakogusa Predicted Gene
- Lj2g3v1468080.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1468080.2 Non Chatacterized Hit- tr|I1J4X0|I1J4X0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.12503 PE,83.95,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain; helix,CUFF.37195.2
(350 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 235 4e-62
AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 204 8e-53
AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 133 2e-31
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL... 118 8e-27
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 110 1e-24
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 110 1e-24
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 110 1e-24
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 77 2e-14
AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHL... 72 5e-13
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 6e-11
AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 63 3e-10
AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 62 4e-10
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 62 7e-10
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 3e-09
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 3e-09
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 4e-09
AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 4e-09
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-... 59 6e-09
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 59 6e-09
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 59 6e-09
AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 | ch... 54 1e-07
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 2e-07
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 53 3e-07
AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 5e-07
AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 1e-06
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 1e-06
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 1e-06
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ... 50 2e-06
AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 2e-06
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 3e-06
AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHL... 50 3e-06
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 3e-06
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 3e-06
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 5e-06
AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 6e-06
AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 6e-06
>AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238904 FORWARD LENGTH=351
Length = 351
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/181 (66%), Positives = 140/181 (77%), Gaps = 6/181 (3%)
Query: 176 FNMGMCG--EKKAKSKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILG 233
F++G CG K KSKKLEGQPSKNLMAE LNDRLSMLRSIVPKISKMDRTSILG
Sbjct: 155 FSVGYCGGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILG 214
Query: 234 DTIDYMKELLERIGNLQEEETEEGK----NQIDLLGISKEQKPNEAMVRNSPKFDVERKD 289
D IDYMKELL++I LQ+EE E G + L G K+ NE +VRNSPKF+++R+D
Sbjct: 215 DAIDYMKELLDKINKLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRD 274
Query: 290 QDTRISICCATKPGLLLSTVNTLEALGLEIHQCVISSFSDFSLQASCSEAAGQRNCMSPE 349
+DTR+ ICC+ KPGLLLSTVNTLE LGLEI QCVIS FSDFSLQASCSE A QR+ ++ E
Sbjct: 275 EDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQASCSEGAEQRDFITSE 334
Query: 350 E 350
+
Sbjct: 335 D 335
>AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:3341357-3342877 FORWARD
LENGTH=315
Length = 315
Score = 204 bits (519), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 126/166 (75%), Gaps = 5/166 (3%)
Query: 184 KKAKSKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELL 243
KK +KKLEGQPSKNLMAE LNDRLS+LRSIVPKI+KMDRTSILGD IDYMKELL
Sbjct: 138 KKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELL 197
Query: 244 ERIGNLQEEETEEGKNQIDLLGISKEQKPNEAMVRNSPKFDVERKDQDTRISICCATKPG 303
++I LQE+E E G N I+ NE+MVRNS KF+V++++ +T I ICC TKPG
Sbjct: 198 DKINKLQEDEQELGSNSHLSTLIT-----NESMVRNSLKFEVDQREVNTHIDICCPTKPG 252
Query: 304 LLLSTVNTLEALGLEIHQCVISSFSDFSLQASCSEAAGQRNCMSPE 349
L++STV+TLE LGLEI QCVIS FSDFSLQASC E QR ++ E
Sbjct: 253 LVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSE 298
>AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238635 FORWARD LENGTH=290
Length = 290
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/114 (64%), Positives = 81/114 (71%), Gaps = 6/114 (5%)
Query: 176 FNMGMCG--EKKAKSKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILG 233
F++G CG K KSKKLEGQPSKNLMAE LNDRLSMLRSIVPKISKMDRTSILG
Sbjct: 155 FSVGYCGGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILG 214
Query: 234 DTIDYMKELLERIGNLQEEETEEGK----NQIDLLGISKEQKPNEAMVRNSPKF 283
D IDYMKELL++I LQ+EE E G + L G K+ NE +VRNSPK
Sbjct: 215 DAIDYMKELLDKINKLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKI 268
>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:4384758-4386392
FORWARD LENGTH=450
Length = 450
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 100/171 (58%), Gaps = 15/171 (8%)
Query: 195 PSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQE--E 252
P+KNLMAE LNDRL MLRS+VPKISKMDR SILGD IDY+KELL+RI +L E
Sbjct: 265 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELE 324
Query: 253 ETEEGKNQIDLLG---------ISKEQKPNEAMVR---NSPKFDVE-RKDQDTRISICCA 299
T + + L + +E P+ ++ P+ +V R+ + I + C
Sbjct: 325 STPPSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFCG 384
Query: 300 TKPGLLLSTVNTLEALGLEIHQCVISSFSDFSLQASCSEAAGQRNCMSPEE 350
+PGLLLST+ L+ LGL++ Q VIS F+ F+L +E + + + PE+
Sbjct: 385 RRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDVLPEQ 435
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 88/157 (56%), Gaps = 19/157 (12%)
Query: 195 PSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEE-- 252
P+KNLMAE LNDRL MLRS+VPKISKMDR SILGD IDY+KELL+RI +L E
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
Query: 253 ETEEGK--------------NQIDLLGISKEQKPNEAMVRNSPKFDVE---RKDQDTRIS 295
T G Q + +E P+ + VE R+ + I
Sbjct: 365 STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIH 424
Query: 296 ICCATKPGLLLSTVNTLEALGLEIHQCVISSFSDFSL 332
+ C +PGLLL+T+ L+ LGL++ Q VIS F+ F+L
Sbjct: 425 MFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFAL 461
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 88/157 (56%), Gaps = 19/157 (12%)
Query: 195 PSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEE-- 252
P+KNLMAE LNDRL MLRS+VPKISKMDR SILGD IDY+KELL+RI +L E
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
Query: 253 ETEEGK--------------NQIDLLGISKEQKPNEAMVRNSPKFDVE---RKDQDTRIS 295
T G Q + +E P+ + VE R+ + I
Sbjct: 365 STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIH 424
Query: 296 ICCATKPGLLLSTVNTLEALGLEIHQCVISSFSDFSL 332
+ C +PGLLL+T+ L+ LGL++ Q VIS F+ F+L
Sbjct: 425 MFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFAL 461
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 88/157 (56%), Gaps = 19/157 (12%)
Query: 195 PSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEE-- 252
P+KNLMAE LNDRL MLRS+VPKISKMDR SILGD IDY+KELL+RI +L E
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
Query: 253 ETEEGK--------------NQIDLLGISKEQKPNEAMVRNSPKFDVE---RKDQDTRIS 295
T G Q + +E P+ + VE R+ + I
Sbjct: 365 STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIH 424
Query: 296 ICCATKPGLLLSTVNTLEALGLEIHQCVISSFSDFSL 332
+ C +PGLLL+T+ L+ LGL++ Q VIS F+ F+L
Sbjct: 425 MFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFAL 461
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 77/155 (49%), Gaps = 31/155 (20%)
Query: 196 SKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEE--- 252
+KNLMAE LNDRL LRS+VP+I+K+DR SILGD I+Y+KEL LQ+E
Sbjct: 313 AKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEE 372
Query: 253 --ETEEGKNQ----IDLLGISKE---------------------QKPNEAMVRNSPKFDV 285
ETE+G N+ + L G + N+ P+ DV
Sbjct: 373 NSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDV 432
Query: 286 ERKD-QDTRISICCATKPGLLLSTVNTLEALGLEI 319
+ D ++ + + C KPG + L++LGLE+
Sbjct: 433 AQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEV 467
>AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:6182067-6186261
FORWARD LENGTH=518
Length = 518
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 127 SAPPPLLPQEDNQS--LDEEFGFLGSDNNQGLEQIKDS----CKIEEQVSEVPMVFNMGM 180
S P LL + S + F +N + +Q+K + +++ + VP + +
Sbjct: 294 SHPTSLLSDSVSTSSYIQSSFATWRVENGKEHQQVKTAPSSQWVLKQMIFRVPFLHD--- 350
Query: 181 CGEKKAKSKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMK 240
K K+L + +++AE LN++ LRS+VP ++KMD+ SILGDTI Y+
Sbjct: 351 ----NTKDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVN 406
Query: 241 ELLERIGNLQEEETEEGKNQIDLLGISKEQKPNEAMVRNSPKFDVERKDQDTRISICCAT 300
L +R+ L+ E+ + ++ + S + +V + D + + C
Sbjct: 407 HLRKRVHELENTHHEQ-----------QHKRTRTCKRKTSEEVEVSIIENDVLLEMRCEY 455
Query: 301 KPGLLLSTVNTLEALGLEIHQCVISSFSDFSLQA 334
+ GLLL + L LG+E V +S +D +A
Sbjct: 456 RDGLLLDILQVLHELGIET-TAVHTSVNDHDFEA 488
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=225
Length = 225
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 13/140 (9%)
Query: 196 SKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEEETE 255
SKN+++E LN RL LRS+VP ISK+D+ S++ D+IDYM+EL+++ L E E
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTL-EAEIR 111
Query: 256 EGKNQIDLLGISKEQKPNE--AMVRNSPKFDVERK-----DQDTRISICCATKPGLLLST 308
E +++ LL + P + V++ P +E K ++ + I C+ K ++
Sbjct: 112 ELESRSTLL-----ENPMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQL 166
Query: 309 VNTLEALGLEIHQCVISSFS 328
LE+L L I SSF+
Sbjct: 167 CKVLESLNLNILTTNFSSFT 186
>AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr4:9933702-9935471 REVERSE LENGTH=589
Length = 589
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 194 QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEEE 253
+P ++ AE LN R LR++VP +SKMD+ S+LGD I Y+ EL ++ E +
Sbjct: 413 EPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKL-QKAESD 471
Query: 254 TEEGKNQIDLLGISKEQKPNEAMVRNSP------------KFDVERKDQDTRISICCATK 301
EE + QID++ +KE ++ V++ + DV+ D I I C+ +
Sbjct: 472 KEELQKQIDVM--NKEAGNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQCSKR 529
Query: 302 PGLLLSTVNTLEALGLEIHQCVISSFSDFSLQASCSEAAGQ 342
+ L+ L LE++ +S +D +Q + + Q
Sbjct: 530 NHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKMGNQ 570
>AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:18974231-18976009 FORWARD
LENGTH=592
Length = 592
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 23/167 (13%)
Query: 194 QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEEE 253
+P ++ AE LN R LR++VP +SKMD+ S+LGD I Y+ EL + LQ+ E
Sbjct: 412 EPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSK---LQQAE 468
Query: 254 TEEGKNQIDLLGISKE--------------QKPNEAMVRNSPKFDVERK--DQDTRISIC 297
+++ + Q L G+SKE + N+ +S + +++ K D I +
Sbjct: 469 SDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQ 528
Query: 298 CATK--PGLLLSTVNTLEALGLEIHQCVISSFSDFSLQASCSEAAGQ 342
C K PG + L+ L LE++ +S +D +Q + + Q
Sbjct: 529 CGKKDHPGARF--MEALKELDLEVNHASLSVVNDLMIQQATVKMGSQ 573
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 182 GEKKAKSKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKE 241
G K A ++ +P ++ AE LN R LRS+VP ISKMD+ S+LGD I Y+KE
Sbjct: 383 GRKPANGRE---EPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKE 439
Query: 242 LLERIGNLQEEETEEGKNQIDLLGISKEQKPNEAMVRNSPKFDVERKDQDTRISIC 297
L E++ +++E K+ + N V SP+ D++ +++ + +
Sbjct: 440 LQEKVKIMEDERVGTDKSL---------SESNTITVEESPEVDIQAMNEEVVVRVI 486
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645168 FORWARD
LENGTH=184
Length = 184
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 196 SKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEE 252
SKN+++E LN RL LRS+VP ISK+D+ S++ D+IDYM+EL+++ L+ E
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAE 109
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=254
Length = 254
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 196 SKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEE 252
SKN+++E LN RL LRS+VP ISK+D+ S++ D+IDYM+EL+++ L+ E
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAE 109
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17796362-17797647 REVERSE
LENGTH=328
Length = 328
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 198 NLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEEETEEG 257
+++AE L R L ++VP + KMD+ S+LGD + ++K L ER+G L+E++ E
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERR 212
Query: 258 KNQIDLLGISKEQKPNEAMVRNS-----------PKFDVERKDQDTRISICCATKPGLLL 306
+ L+ SK + +S P+ +V D+D I I C + G L
Sbjct: 213 LESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGHLA 272
Query: 307 STVNTLEALGLEIHQCVISSF 327
+ +E L + I + +F
Sbjct: 273 KIMAEIEKLHILITNSSVLNF 293
>AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645505 FORWARD
LENGTH=263
Length = 263
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 196 SKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEE 252
SKN+++E LN RL LRS+VP ISK+D+ S++ D+IDYM+EL+++ L+ E
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAE 109
>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:23599809-23602734
FORWARD LENGTH=596
Length = 596
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 33/151 (21%)
Query: 200 MAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQE-EETEEGK 258
++E LN+R LRSI+P ISK+D+ SIL DTI+Y+++L +R+ L+ E+ + +
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
Query: 259 NQIDLLGISKEQKPNEAMVRNSPK-FDVERKDQDT-------------------RIS--- 295
+I ++ K +KP++ R S + +RK D RIS
Sbjct: 468 TRITMM---KRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLG 524
Query: 296 ------ICCATKPGLLLSTVNTLEALGLEIH 320
+ CA + G+LL ++ + L L+ H
Sbjct: 525 NEVVIELRCAWREGILLEIMDVISDLNLDSH 555
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 33/151 (21%)
Query: 200 MAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQE-EETEEGK 258
++E LN+R LRSI+P ISK+D+ SIL DTI+Y+++L +R+ L+ E+ + +
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
Query: 259 NQIDLLGISKEQKPNEAMVRNSPK-FDVERKDQDT-------------------RIS--- 295
+I ++ K +KP++ R S + +RK D RIS
Sbjct: 468 TRITMM---KRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLG 524
Query: 296 ------ICCATKPGLLLSTVNTLEALGLEIH 320
+ CA + G+LL ++ + L L+ H
Sbjct: 525 NEVVIELRCAWREGILLEIMDVISDLNLDSH 555
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 33/151 (21%)
Query: 200 MAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQE-EETEEGK 258
++E LN+R LRSI+P ISK+D+ SIL DTI+Y+++L +R+ L+ E+ + +
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
Query: 259 NQIDLLGISKEQKPNEAMVRNSPK-FDVERKDQDT-------------------RIS--- 295
+I ++ K +KP++ R S + +RK D RIS
Sbjct: 468 TRITMM---KRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLG 524
Query: 296 ------ICCATKPGLLLSTVNTLEALGLEIH 320
+ CA + G+LL ++ + L L+ H
Sbjct: 525 NEVVIELRCAWREGILLEIMDVISDLNLDSH 555
>AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 |
chr5:19002719-19004254 FORWARD LENGTH=511
Length = 511
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 194 QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEE- 252
+P ++ AE LN R LR++VP +SKMD+TS+L D + Y+ EL + N++ E
Sbjct: 340 KPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEK 399
Query: 253 --------ETEEGKNQIDLL-GISKEQKPNEAMVRNSPKFDVERKDQDTRISICCATKPG 303
E +E Q + + + K ++ M++ K +E D R+ PG
Sbjct: 400 HAIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKI-MESDDAMVRVESRKDHHPG 458
Query: 304 LLLSTVNTLEALGLEIHQCVISSFSDFSLQ 333
L +N L L LE++ IS +D +Q
Sbjct: 459 ARL--MNALMDLELEVNHASISVMNDLMIQ 486
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9678012-9679165 FORWARD
LENGTH=295
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 16/153 (10%)
Query: 198 NLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEEETEEG 257
+++AE L+++ L +++P + K D+ +IL D I MK+L E++ L+EE +E
Sbjct: 120 HVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEE--KEA 177
Query: 258 KNQIDLLGISKEQK------PNEA--------MVRNSPKFDVERKDQDTRISICCATKPG 303
Q++ + + K+ K PN + + P+ + + D I I C G
Sbjct: 178 TRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRILCEKSKG 237
Query: 304 LLLSTVNTLEALGLEIHQCVISSFSDFSLQASC 336
+++ +NT+E L I ++ F D +L +
Sbjct: 238 CMINILNTIENFQLRIENSIVLPFGDSTLDITV 270
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
Basic helix-loop-helix (bHLH) DNA-binding family protein
| chr1:11799042-11800913 REVERSE LENGTH=623
Length = 623
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 182 GEKKAKSKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKE 241
G K A ++ +P ++ AE LN R LR++VP +SKMD+ S+LGD I Y+ E
Sbjct: 440 GRKPANGRE---EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINE 496
Query: 242 LLERIGNLQEEETEEGKNQID 262
L ++ + E+ + KNQ++
Sbjct: 497 LKSKVVKTESEKLQI-KNQLE 516
>AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:9267599-9269002 FORWARD
LENGTH=467
Length = 467
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 198 NLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEEE---T 254
++ AE LN R LR++VP ISKMD+ S+L D I Y+ ++ ++I + E+
Sbjct: 321 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQIMK 380
Query: 255 EEGKNQIDLLGISKEQKPNEAMVRNS 280
NQI + +Q+ ++A+VR S
Sbjct: 381 RRESNQITPAEVDYQQRHDDAVVRLS 406
>AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 201 AEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEEETEEG 257
AE LN R LRS+VP ISKMD+ S+LGD + Y+ EL ++ ++ E G
Sbjct: 437 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERLG 493
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 201 AEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEEETEEG 257
AE LN R LRS+VP ISKMD+ S+LGD + Y+ EL ++ ++ E G
Sbjct: 437 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERLG 493
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 201 AEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEEETEEG 257
AE LN R LRS+VP ISKMD+ S+LGD + Y+ EL ++ ++ E G
Sbjct: 437 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERLG 493
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29,
ATFIT1 | FER-like regulator of iron uptake |
chr2:12004713-12005908 FORWARD LENGTH=318
Length = 318
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 182 GEKKAKSKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKE 241
G +K K+ + S+ L++E + D+L LRS+VP I+KMD+ SI+GD + Y++E
Sbjct: 121 GTRKTKTDR-----SRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQE 175
Query: 242 L 242
L
Sbjct: 176 L 176
>AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:362230-363639 REVERSE
LENGTH=423
Length = 423
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 198 NLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQEE 252
++ AE LN R LR+IVPK+S+MD+ S+L D + Y++ L +I +L+ E
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETE 304
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 196 SKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKEL 242
SKN+++E LN RL LRS+VP I+KMD+ SI+ D I Y++ L
Sbjct: 53 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGL 99
>AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:16529457-16532866
FORWARD LENGTH=637
Length = 637
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 209 LNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGNLQ---EEETEEGKNQIDLLG 265
LN+R LR I+P I+K+D+ SIL DTI+Y++EL R+ L+ E E + + +
Sbjct: 453 LNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTDTETRGTMTM-- 510
Query: 266 ISKEQKPNEAMVRNS 280
K +KP +A R S
Sbjct: 511 --KRKKPCDAGERTS 523
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 196 SKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKEL 242
SKN+++E LN RL LRS+VP I+KMD+ SI+ D I Y++ L
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGL 100
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 196 SKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKEL 242
SKN+++E LN RL LRS+VP I+KMD+ SI+ D I Y++ L
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGL 100
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 196 SKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKEL 242
SKN+++E LN RL LRS+VP I+KMD+ SI+ D I Y++ L
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGL 100
>AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3506463-3508752 FORWARD
LENGTH=441
Length = 441
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 185 KAKSKKL--EGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKEL 242
KA K L E SKNL +E +N + LR++VPKI+K+++ I D +DY+ EL
Sbjct: 250 KANKKLLPTENFKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINEL 309
Query: 243 LERIGNLQEEETEEGKNQIDLLGISKEQK 271
L L++E +G N+++ I+ E++
Sbjct: 310 LVEKQKLEDE--LKGINEMECKEIAAEEQ 336
>AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13296655-13298139 FORWARD
LENGTH=428
Length = 428
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 130 PPLLPQEDNQSLDEEFGFLGSDNNQGLEQIKDSCKIEEQVSEVPMVFNMGMCGEKKAKSK 189
PPL+P D LG D N ++ + + E ++ F+ G+ K +
Sbjct: 155 PPLIPSNDYSGY-----LLGIDTNTTTQRDESNVGDENNNAQ----FDSGIIEFSKEIRR 205
Query: 190 KLEGQ-PSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGN 248
K G+ +K E LN+R L+ ++P SK DR SIL D IDY+ EL R+
Sbjct: 206 KGRGKRKNKPFTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSE 265
Query: 249 LQ 250
L+
Sbjct: 266 LK 267