Miyakogusa Predicted Gene
- Lj2g3v1467700.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1467700.1 tr|Q9AXW4|Q9AXW4_BRACM Eli3 product (Fragment)
OS=Brassica campestris GN=ELI3-BR-1 PE=4
SV=1,65.28,2e-19,NAD(P)-binding Rossmann-fold domains,NULL; seg,NULL;
no description,NAD(P)-binding domain; ADH_zinc_,CUFF.37172.1
(76 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G37980.1 | Symbols: ELI3-1, ELI3, ATCAD7, CAD7 | elicitor-act... 70 3e-13
AT4G37980.2 | Symbols: ELI3-1, ELI3, ATCAD7, CAD7 | elicitor-act... 70 3e-13
AT4G37990.1 | Symbols: ELI3-2, ELI3, ATCAD8, CAD-B2 | elicitor-a... 65 7e-12
AT4G37970.1 | Symbols: ATCAD6, CAD6 | cinnamyl alcohol dehydroge... 64 2e-11
AT1G72680.1 | Symbols: ATCAD1, CAD1 | cinnamyl-alcohol dehydroge... 59 7e-10
AT4G39330.2 | Symbols: ATCAD9, CAD9 | cinnamyl alcohol dehydroge... 55 8e-09
AT4G39330.1 | Symbols: ATCAD9, CAD9 | cinnamyl alcohol dehydroge... 55 8e-09
AT2G21890.1 | Symbols: CAD3, ATCAD3 | cinnamyl alcohol dehydroge... 55 1e-08
AT2G21730.1 | Symbols: CAD2, ATCAD2 | cinnamyl alcohol dehydroge... 54 2e-08
AT3G19450.1 | Symbols: CAD4, ATCAD4, CAD, CAD-C | GroES-like zin... 51 1e-07
AT4G34230.2 | Symbols: CAD5, CAD-5 | cinnamyl alcohol dehydrogen... 48 2e-06
AT4G34230.1 | Symbols: CAD5, ATCAD5, CAD-5 | cinnamyl alcohol de... 48 2e-06
>AT4G37980.1 | Symbols: ELI3-1, ELI3, ATCAD7, CAD7 |
elicitor-activated gene 3-1 | chr4:17852670-17854302
FORWARD LENGTH=357
Length = 357
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 46/72 (63%)
Query: 3 FDKPXXXXXXXXXXXXXXMAVKFAKALGAKVTVISTSPNKKTEAIEKLGAVSFVVSREQD 62
DKP +AVKFAKA+G KVTVISTS K+ EA+ +LGA +F+VSR+
Sbjct: 176 LDKPGMHIGVVGLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPK 235
Query: 63 QMKAVMGTFDGM 74
QMK MGT DG+
Sbjct: 236 QMKDAMGTMDGI 247
>AT4G37980.2 | Symbols: ELI3-1, ELI3, ATCAD7, CAD7 |
elicitor-activated gene 3-1 | chr4:17852670-17853914
FORWARD LENGTH=298
Length = 298
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 46/72 (63%)
Query: 3 FDKPXXXXXXXXXXXXXXMAVKFAKALGAKVTVISTSPNKKTEAIEKLGAVSFVVSREQD 62
DKP +AVKFAKA+G KVTVISTS K+ EA+ +LGA +F+VSR+
Sbjct: 176 LDKPGMHIGVVGLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPK 235
Query: 63 QMKAVMGTFDGM 74
QMK MGT DG+
Sbjct: 236 QMKDAMGTMDGI 247
>AT4G37990.1 | Symbols: ELI3-2, ELI3, ATCAD8, CAD-B2 |
elicitor-activated gene 3-2 | chr4:17855964-17857388
FORWARD LENGTH=359
Length = 359
Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 45/72 (62%)
Query: 3 FDKPXXXXXXXXXXXXXXMAVKFAKALGAKVTVISTSPNKKTEAIEKLGAVSFVVSREQD 62
DKP + VKFAKA+G KVTVISTS K+ EAI +LGA +F+VSR+
Sbjct: 176 LDKPGMHIGVVGLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPK 235
Query: 63 QMKAVMGTFDGM 74
Q+K MGT DG+
Sbjct: 236 QIKDAMGTMDGI 247
>AT4G37970.1 | Symbols: ATCAD6, CAD6 | cinnamyl alcohol
dehydrogenase 6 | chr4:17849672-17852145 FORWARD
LENGTH=363
Length = 363
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 41/54 (75%)
Query: 21 MAVKFAKALGAKVTVISTSPNKKTEAIEKLGAVSFVVSREQDQMKAVMGTFDGM 74
+ V+FAKA G KVTV+S++ K +A++ LGA F+VS ++DQMKA MGT DG+
Sbjct: 199 IGVRFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAMGTMDGI 252
>AT1G72680.1 | Symbols: ATCAD1, CAD1 | cinnamyl-alcohol
dehydrogenase | chr1:27359346-27360876 REVERSE
LENGTH=355
Length = 355
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 21 MAVKFAKALGAKVTVISTSPNKKTEAIEKLGAVSFVVSREQDQMKAVMGTFD 72
MAVKF KA G VTV STS +KK EA+ LGA +FV+S + DQMKA+ + D
Sbjct: 196 MAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMKALEKSLD 247
>AT4G39330.2 | Symbols: ATCAD9, CAD9 | cinnamyl alcohol
dehydrogenase 9 | chr4:18291268-18292740 FORWARD
LENGTH=311
Length = 311
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%)
Query: 21 MAVKFAKALGAKVTVISTSPNKKTEAIEKLGAVSFVVSREQDQMKAVMGTFD 72
+AVK KA G KVTVIS+S K EAI LGA SF+V+ + +MKA +GT D
Sbjct: 198 VAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIGTMD 249
>AT4G39330.1 | Symbols: ATCAD9, CAD9 | cinnamyl alcohol
dehydrogenase 9 | chr4:18291268-18292772 FORWARD
LENGTH=360
Length = 360
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%)
Query: 21 MAVKFAKALGAKVTVISTSPNKKTEAIEKLGAVSFVVSREQDQMKAVMGTFD 72
+AVK KA G KVTVIS+S K EAI LGA SF+V+ + +MKA +GT D
Sbjct: 198 VAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIGTMD 249
>AT2G21890.1 | Symbols: CAD3, ATCAD3 | cinnamyl alcohol
dehydrogenase homolog 3 | chr2:9331089-9332646 FORWARD
LENGTH=375
Length = 375
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 21 MAVKFAKALGAKVTVISTSPNKKTEAIEKLGAVSFVVSREQDQMKAVMGTFD 72
+AVK KA G +VTVIS S K+ EAI++LGA SF+V+ + +MK +GT D
Sbjct: 193 IAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMD 244
>AT2G21730.1 | Symbols: CAD2, ATCAD2 | cinnamyl alcohol
dehydrogenase homolog 2 | chr2:9280054-9281623 FORWARD
LENGTH=376
Length = 376
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 21 MAVKFAKALGAKVTVISTSPNKKTEAIEKLGAVSFVVSREQDQMKAVMGTFD 72
+AVK KA G +VTVIS S K+ EAI++LGA SF+V+ + +MK +GT D
Sbjct: 194 IAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMD 245
>AT3G19450.1 | Symbols: CAD4, ATCAD4, CAD, CAD-C | GroES-like
zinc-binding alcohol dehydrogenase family protein |
chr3:6744859-6747005 FORWARD LENGTH=365
Length = 365
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 21 MAVKFAKALGAKVTVISTSPNKKTEAIEKLGAVSFVVSREQDQMKAVMGTFD 72
M VK AKA+G VTVIS+S KK EAIE LGA +VVS + +M+ + + D
Sbjct: 196 MGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAEMQRLADSLD 247
>AT4G34230.2 | Symbols: CAD5, CAD-5 | cinnamyl alcohol dehydrogenase
5 | chr4:16386898-16388666 REVERSE LENGTH=357
Length = 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 21 MAVKFAKALGAKVTVISTSPNKKTEAIEKLGAVSFVVSREQDQMKAVMGTFD 72
M VK AKA+G VTVIS+S K+ EA++ LGA +V+ +Q +M + + D
Sbjct: 195 MGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLD 246
>AT4G34230.1 | Symbols: CAD5, ATCAD5, CAD-5 | cinnamyl alcohol
dehydrogenase 5 | chr4:16386898-16388666 REVERSE
LENGTH=357
Length = 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 21 MAVKFAKALGAKVTVISTSPNKKTEAIEKLGAVSFVVSREQDQMKAVMGTFD 72
M VK AKA+G VTVIS+S K+ EA++ LGA +V+ +Q +M + + D
Sbjct: 195 MGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLD 246