Miyakogusa Predicted Gene
- Lj2g3v1451720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1451720.1 Non Chatacterized Hit- tr|I1K1I4|I1K1I4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37242
PE,73.21,0,WW_DOMAIN_2,WW/Rsp5/WWP; HELICASE_ATP_BIND_1,Helicase,
superfamily 1/2, ATP-binding domain; HELICASE,CUFF.37116.1
(750 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 760 0.0
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 694 0.0
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 694 0.0
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 694 0.0
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 693 0.0
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 645 0.0
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 640 0.0
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 443 e-124
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 438 e-123
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 369 e-102
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 332 7e-91
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 331 1e-90
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 330 2e-90
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 330 2e-90
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 330 2e-90
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 330 2e-90
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 330 3e-90
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 329 4e-90
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 315 6e-86
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 295 6e-80
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 287 2e-77
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 270 3e-72
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 266 5e-71
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 246 3e-65
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 246 3e-65
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 245 9e-65
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 242 8e-64
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 236 6e-62
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 236 6e-62
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 235 7e-62
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 228 9e-60
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 208 9e-54
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 203 3e-52
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 203 4e-52
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 201 2e-51
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 201 2e-51
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 201 2e-51
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 196 3e-50
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 196 5e-50
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 194 3e-49
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 193 3e-49
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 189 4e-48
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 185 1e-46
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 183 5e-46
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 182 7e-46
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 182 7e-46
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 182 7e-46
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 181 2e-45
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 179 6e-45
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 179 8e-45
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 176 6e-44
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 176 6e-44
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 175 1e-43
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 174 2e-43
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 173 3e-43
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 173 3e-43
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 173 4e-43
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 173 5e-43
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 171 2e-42
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 169 8e-42
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 168 1e-41
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 167 2e-41
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 163 4e-40
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 159 8e-39
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 159 8e-39
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 156 5e-38
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 156 6e-38
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 149 8e-36
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 145 7e-35
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 145 7e-35
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 145 9e-35
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 145 1e-34
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 142 7e-34
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 142 1e-33
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 110 3e-24
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 108 1e-23
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 101 2e-21
AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosph... 89 1e-17
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 76 1e-13
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 64 4e-10
AT3G05740.1 | Symbols: RECQI1 | RECQ helicase l1 | chr3:1698180-... 59 1e-08
AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase (... 59 1e-08
AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase... 59 1e-08
AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 58 2e-08
AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2... 54 3e-07
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 51 3e-06
AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 50 4e-06
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/543 (69%), Positives = 427/543 (78%), Gaps = 8/543 (1%)
Query: 1 MAATATATVGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYEXXXXXXXXXXXX 60
MAATA+A RYAP DP LPKPW+GLVD +TGYLYFWNPETNVTQYE
Sbjct: 1 MAATASAI---RYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAPPKLAA 57
Query: 61 XXXXXXXXXXXXXXXXXXDLKXXXXXXXXXX--XXXXXXXXHQSSKEGSFSSHPNGT--- 115
K +++ + G SS+ +
Sbjct: 58 IPVSSSVQTNQQSSSGFNSGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDAASGLG 117
Query: 116 HATGNVSSVKDQGASDAGAGLSPESYRRRHEITVSGDNVPPPFTSFGSTGLPPEILKEVQ 175
+A+ SS + +S AG LSPE+Y R+HEITVSG VPPP SF +TGLP E+L+EV
Sbjct: 118 NASSGGSSARGPPSSAAGNELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVY 177
Query: 176 NAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVL 235
+AGFSAP+PIQAQSWPIA+Q+RDIVAIAKTGSGKTLGYLIP F HL+R N+S+MGPT+L
Sbjct: 178 SAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMGPTIL 237
Query: 236 VLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDI 295
VLSPTRELATQIQ EA+KFGKSS+ISC CLYGGAPKGPQL++IERG DIVVATPGRLNDI
Sbjct: 238 VLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDI 297
Query: 296 LEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAA 355
LEM+RISLHQ+SYLVLDEADRMLDMGFEPQIRKIVNEVP +RQTLMYTATWPKEVRKIAA
Sbjct: 298 LEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAA 357
Query: 356 DLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKK 415
DLLVNP QVNIGNVDELVANKSITQ IEVL P +KH RLEQILRSQ+ GSKIIIFCSTK+
Sbjct: 358 DLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKR 417
Query: 416 MCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVV 475
MCDQLARNLTR FGAAAIHGDKSQAERD VL+QFR+GR+PVLVATDVAARGLD+KDIRVV
Sbjct: 418 MCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVV 477
Query: 476 VNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSELRD 535
VNYDFP GVEDYVHRI LAYTFF +QDAK+ASDLIK+LEGANQ+VP ++R+
Sbjct: 478 VNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVRE 537
Query: 536 MST 538
M+T
Sbjct: 538 MAT 540
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/425 (78%), Positives = 371/425 (87%)
Query: 114 GTHATGNVSSVKDQGASDAGAGLSPESYRRRHEITVSGDNVPPPFTSFGSTGLPPEILKE 173
G A G S+ +S + LSPE+Y RRHEITVSG VPPP SF +TG PPE+L+E
Sbjct: 113 GDSAYGAASTRVPLPSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLRE 172
Query: 174 VQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPT 233
V +AGFSAPTPIQAQSWPIA+Q RDIVAIAKTGSGKTLGYLIP F HL+R N+S+MGPT
Sbjct: 173 VLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPT 232
Query: 234 VLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLN 293
+LVLSPTRELATQIQ+EAVKFG+SSRISC CLYGGAPKGPQLRD+ERGADIVVATPGRLN
Sbjct: 233 ILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLN 292
Query: 294 DILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKI 353
DILEMRRISL QISYLVLDEADRMLDMGFEPQIRKIV E+P +RQTLMYTATWPK VRKI
Sbjct: 293 DILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKI 352
Query: 354 AADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCST 413
AADLLVNP QVNIGNVDELVANKSITQHIEV+ P +K RRLEQILRSQ+ GSK+IIFCST
Sbjct: 353 AADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCST 412
Query: 414 KKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIR 473
K+MCDQL RNLTRQFGAAAIHGDKSQ ERD+VL+QFR+GR+PVLVATDVAARGLD+KDIR
Sbjct: 413 KRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIR 472
Query: 474 VVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSEL 533
VVNYDFP GVEDYVHRI A+TFF +QD+K+ASDLIK+LEGANQRVP ++
Sbjct: 473 AVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQI 532
Query: 534 RDMST 538
R+M+T
Sbjct: 533 REMAT 537
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 1 MAATATATVGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYE 48
MAATA A+V RYAP D TLPKPW+GL+D +TGYLYFWNPETNVTQYE
Sbjct: 1 MAATAAASV-VRYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYE 47
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/425 (78%), Positives = 371/425 (87%)
Query: 114 GTHATGNVSSVKDQGASDAGAGLSPESYRRRHEITVSGDNVPPPFTSFGSTGLPPEILKE 173
G A G S+ +S + LSPE+Y RRHEITVSG VPPP SF +TG PPE+L+E
Sbjct: 113 GDSAYGAASTRVPLPSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLRE 172
Query: 174 VQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPT 233
V +AGFSAPTPIQAQSWPIA+Q RDIVAIAKTGSGKTLGYLIP F HL+R N+S+MGPT
Sbjct: 173 VLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPT 232
Query: 234 VLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLN 293
+LVLSPTRELATQIQ+EAVKFG+SSRISC CLYGGAPKGPQLRD+ERGADIVVATPGRLN
Sbjct: 233 ILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLN 292
Query: 294 DILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKI 353
DILEMRRISL QISYLVLDEADRMLDMGFEPQIRKIV E+P +RQTLMYTATWPK VRKI
Sbjct: 293 DILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKI 352
Query: 354 AADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCST 413
AADLLVNP QVNIGNVDELVANKSITQHIEV+ P +K RRLEQILRSQ+ GSK+IIFCST
Sbjct: 353 AADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCST 412
Query: 414 KKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIR 473
K+MCDQL RNLTRQFGAAAIHGDKSQ ERD+VL+QFR+GR+PVLVATDVAARGLD+KDIR
Sbjct: 413 KRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIR 472
Query: 474 VVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSEL 533
VVNYDFP GVEDYVHRI A+TFF +QD+K+ASDLIK+LEGANQRVP ++
Sbjct: 473 AVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQI 532
Query: 534 RDMST 538
R+M+T
Sbjct: 533 REMAT 537
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 1 MAATATATVGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYE 48
MAATA A+V RYAP D TLPKPW+GL+D +TGYLYFWNPETNVTQYE
Sbjct: 1 MAATAAASV-VRYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYE 47
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/425 (78%), Positives = 371/425 (87%)
Query: 114 GTHATGNVSSVKDQGASDAGAGLSPESYRRRHEITVSGDNVPPPFTSFGSTGLPPEILKE 173
G A G S+ +S + LSPE+Y RRHEITVSG VPPP SF +TG PPE+L+E
Sbjct: 113 GDSAYGAASTRVPLPSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLRE 172
Query: 174 VQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPT 233
V +AGFSAPTPIQAQSWPIA+Q RDIVAIAKTGSGKTLGYLIP F HL+R N+S+MGPT
Sbjct: 173 VLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPT 232
Query: 234 VLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLN 293
+LVLSPTRELATQIQ+EAVKFG+SSRISC CLYGGAPKGPQLRD+ERGADIVVATPGRLN
Sbjct: 233 ILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLN 292
Query: 294 DILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKI 353
DILEMRRISL QISYLVLDEADRMLDMGFEPQIRKIV E+P +RQTLMYTATWPK VRKI
Sbjct: 293 DILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKI 352
Query: 354 AADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCST 413
AADLLVNP QVNIGNVDELVANKSITQHIEV+ P +K RRLEQILRSQ+ GSK+IIFCST
Sbjct: 353 AADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCST 412
Query: 414 KKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIR 473
K+MCDQL RNLTRQFGAAAIHGDKSQ ERD+VL+QFR+GR+PVLVATDVAARGLD+KDIR
Sbjct: 413 KRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIR 472
Query: 474 VVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSEL 533
VVNYDFP GVEDYVHRI A+TFF +QD+K+ASDLIK+LEGANQRVP ++
Sbjct: 473 AVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQI 532
Query: 534 RDMST 538
R+M+T
Sbjct: 533 REMAT 537
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 1 MAATATATVGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYE 48
MAATA A+V RYAP D TLPKPW+GL+D +TGYLYFWNPETNVTQYE
Sbjct: 1 MAATAAASV-VRYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYE 47
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/425 (78%), Positives = 371/425 (87%)
Query: 114 GTHATGNVSSVKDQGASDAGAGLSPESYRRRHEITVSGDNVPPPFTSFGSTGLPPEILKE 173
G A G S+ +S + LSPE+Y RRHEITVSG VPPP SF +TG PPE+L+E
Sbjct: 113 GDSAYGAASTRVPLPSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLRE 172
Query: 174 VQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPT 233
V +AGFSAPTPIQAQSWPIA+Q RDIVAIAKTGSGKTLGYLIP F HL+R N+S+MGPT
Sbjct: 173 VLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPT 232
Query: 234 VLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLN 293
+LVLSPTRELATQIQ+EAVKFG+SSRISC CLYGGAPKGPQLRD+ERGADIVVATPGRLN
Sbjct: 233 ILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLN 292
Query: 294 DILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKI 353
DILEMRRISL QISYLVLDEADRMLDMGFEPQIRKIV E+P +RQTLMYTATWPK VRKI
Sbjct: 293 DILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKI 352
Query: 354 AADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCST 413
AADLLVNP QVNIGNVDELVANKSITQHIEV+ P +K RRLEQILRSQ+ GSK+IIFCST
Sbjct: 353 AADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCST 412
Query: 414 KKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIR 473
K+MCDQL RNLTRQFGAAAIHGDKSQ ERD+VL+QFR+GR+PVLVATDVAARGLD+KDIR
Sbjct: 413 KRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIR 472
Query: 474 VVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSEL 533
VVNYDFP GVEDYVHRI A+TFF +QD+K+ASDLIK+LEGANQRVP ++
Sbjct: 473 AVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQI 532
Query: 534 RDMST 538
R+M+T
Sbjct: 533 REMAT 537
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 1 MAATATATVGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYE 48
MAATA A+V RYAP D TLPKPW+GL+D +TGYLYFWNPETNVTQYE
Sbjct: 1 MAATAAASV-VRYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYE 47
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/383 (80%), Positives = 342/383 (89%)
Query: 156 PPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLI 215
PP F S + P + V +AGFSAP+PIQAQSWPIA+Q+RDIVAIAKTGSGKTLGYLI
Sbjct: 226 PPAAGFNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLI 285
Query: 216 PAFFHLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQL 275
P F HL+R N+S+MGPT+LVLSPTRELATQIQ EA+KFGKSS+ISC CLYGGAPKGPQL
Sbjct: 286 PGFMHLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQL 345
Query: 276 RDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPA 335
++IERG DIVVATPGRLNDILEM+RISLHQ+SYLVLDEADRMLDMGFEPQIRKIVNEVP
Sbjct: 346 KEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPT 405
Query: 336 RRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLE 395
+RQTLMYTATWPKEVRKIAADLLVNP QVNIGNVDELVANKSITQ IEVL P +KH RLE
Sbjct: 406 KRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLE 465
Query: 396 QILRSQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSP 455
QILRSQ+ GSKIIIFCSTK+MCDQLARNLTR FGAAAIHGDKSQAERD VL+QFR+GR+P
Sbjct: 466 QILRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTP 525
Query: 456 VLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYA 515
VLVATDVAARGLD+KDIRVVVNYDFP GVEDYVHRI LAYTFF +QDAK+A
Sbjct: 526 VLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHA 585
Query: 516 SDLIKVLEGANQRVPSELRDMST 538
SDLIK+LEGANQ+VP ++R+M+T
Sbjct: 586 SDLIKILEGANQKVPPQVREMAT 608
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 93/181 (51%), Gaps = 8/181 (4%)
Query: 1 MAATATATVGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYEXXXXXXXXXXXX 60
MAATA+A RYAP DP LPKPW+GLVD +TGYLYFWNPETNVTQYE
Sbjct: 1 MAATASAI---RYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAPPKLAA 57
Query: 61 XXXXXXXXXXXXXXXXXXDLKXXXXXXXXXX--XXXXXXXXHQSSKEGSFSSHPNGT--- 115
K +++ + G SS+ +
Sbjct: 58 IPVSSSVQTNQQSSSGFNSGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDAASGLG 117
Query: 116 HATGNVSSVKDQGASDAGAGLSPESYRRRHEITVSGDNVPPPFTSFGSTGLPPEILKEVQ 175
+A+ SS + +S AG LSPE+Y R+HEITVSG VPPP SF +TGLP E+L+E
Sbjct: 118 NASSGGSSARGPPSSAAGNELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNELLRECP 177
Query: 176 N 176
N
Sbjct: 178 N 178
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/403 (74%), Positives = 355/403 (88%), Gaps = 1/403 (0%)
Query: 136 LSP-ESYRRRHEITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIAL 194
LSP E YR++HE+T +G+N+P P+ +F S+GLPPEIL+E+ +AGF +PTPIQAQ+WPIAL
Sbjct: 411 LSPVEIYRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIAL 470
Query: 195 QSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKF 254
QSRDIVAIAKTGSGKTLGYLIPAF L+ N+S+ GPTVL+L+PTRELATQIQDEA++F
Sbjct: 471 QSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSRNGPTVLILAPTRELATQIQDEALRF 530
Query: 255 GKSSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEA 314
G+SSRISC CLYGGAPKGPQL+++ERGADIVVATPGRLNDILEM+ I Q+S LVLDEA
Sbjct: 531 GRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEA 590
Query: 315 DRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVA 374
DRMLDMGFEPQIRKIVNE+P RRQTLMYTATWPKEVRKIA+DLLVNPVQVNIG VDEL A
Sbjct: 591 DRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAA 650
Query: 375 NKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIH 434
NK+ITQ++EV+P +K RRLEQILRSQ++GSK+IIFCSTK++CD LAR++ R FGA IH
Sbjct: 651 NKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGRHFGAVVIH 710
Query: 435 GDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXX 494
GDK+Q ERD VL+QFR+G+S VL+ATDVAARGLDIKDIRVV+NYDFPTGVEDYVHRI
Sbjct: 711 GDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRT 770
Query: 495 XXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSELRDMS 537
+A+TFF EQD KYA DLIKVLEGANQ+VP ++RD++
Sbjct: 771 GRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIA 813
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 41/50 (82%), Gaps = 2/50 (4%)
Query: 1 MAAT--ATATVGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYE 48
MA T A+ GPRYAP DPTLP+PW+GL+DG TG LY+WNPETNVTQYE
Sbjct: 1 MATTEDTPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYE 50
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 443 bits (1139), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/404 (52%), Positives = 288/404 (71%), Gaps = 11/404 (2%)
Query: 139 ESYRRRHEITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRD 198
E YR+ EITV G ++P P SF G P +L+EV+ AGF+ PTPIQ+Q WP+A++ RD
Sbjct: 79 EEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRD 138
Query: 199 IVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKM-----GPTVLVLSPTRELATQIQDEAVK 253
++ IA+TGSGKTL YL+PA H+ N M GP VLVL+PTRELA QIQ EA K
Sbjct: 139 LIGIAETGSGKTLSYLLPAIVHV----NAQPMLAHGDGPIVLVLAPTRELAVQIQQEASK 194
Query: 254 FGKSSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDE 313
FG SS+I C+YGG PKGPQ+RD+++G +IV+ATPGRL D++E +L +++YLVLDE
Sbjct: 195 FGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDE 254
Query: 314 ADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELV 373
ADRMLDMGF+PQIRKIV+ + RQTL ++ATWPKEV +++ L NP +V IG+ D L
Sbjct: 255 ADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSD-LK 313
Query: 374 ANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FGAAA 432
AN++I Q ++V+ + K+ +L ++L GS+I++F TKK CDQ+ R L + A +
Sbjct: 314 ANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALS 373
Query: 433 IHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIX 492
IHGDKSQAERD VLS+FR+G+SP++ ATDVAARGLD+KD++ V+NYDFP +EDYVHRI
Sbjct: 374 IHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIG 433
Query: 493 XXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSELRDM 536
AYTFF +A++A +L +L+ A Q+V EL M
Sbjct: 434 RTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSPELASM 477
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/397 (53%), Positives = 284/397 (71%), Gaps = 7/397 (1%)
Query: 141 YRRRHEITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIV 200
YR +I+V G +VP P F P IL+ + GF+ PTPIQAQ WP+AL+ RD++
Sbjct: 147 YRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLI 206
Query: 201 AIAKTGSGKTLGYLIPAFFHLK---RTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKS 257
IA+TGSGKTL YL+PA H+ R G + GP VL+L+PTRELA QIQ+E+ KFG
Sbjct: 207 GIAETGSGKTLAYLLPALVHVSAQPRLGQDD--GPIVLILAPTRELAVQIQEESRKFGLR 264
Query: 258 SRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRM 317
S + C+YGGAPKGPQ+RD+ RG +IV+ATPGRL D+LE + +L +++YLVLDEADRM
Sbjct: 265 SGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRM 324
Query: 318 LDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKS 377
LDMGFEPQIRKIV+++ RQTL+++ATWP+EV +A L +P + IG+ D L AN+S
Sbjct: 325 LDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTD-LKANQS 383
Query: 378 ITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FGAAAIHGD 436
I Q IE++P +K+ RL +L+ GSKI+IF TK+ CDQ+ R L + A AIHGD
Sbjct: 384 INQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGD 443
Query: 437 KSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXX 496
K+Q+ERD VL++F++GRSP++ ATDVAARGLD+KDI+ VVNYDFP +EDY+HRI
Sbjct: 444 KTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGR 503
Query: 497 XXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSEL 533
+A+TFF +AK+A +L+K+L+ A Q VP L
Sbjct: 504 AGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTL 540
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/337 (54%), Positives = 242/337 (71%), Gaps = 7/337 (2%)
Query: 141 YRRRHEITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIV 200
YR +I+V G +VP P F P IL+ + GF+ PTPIQAQ WP+AL+ RD++
Sbjct: 147 YRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLI 206
Query: 201 AIAKTGSGKTLGYLIPAFFHLK---RTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKS 257
IA+TGSGKTL YL+PA H+ R G + GP VL+L+PTRELA QIQ+E+ KFG
Sbjct: 207 GIAETGSGKTLAYLLPALVHVSAQPRLGQDD--GPIVLILAPTRELAVQIQEESRKFGLR 264
Query: 258 SRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRM 317
S + C+YGGAPKGPQ+RD+ RG +IV+ATPGRL D+LE + +L +++YLVLDEADRM
Sbjct: 265 SGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRM 324
Query: 318 LDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKS 377
LDMGFEPQIRKIV+++ RQTL+++ATWP+EV +A L +P + IG+ D L AN+S
Sbjct: 325 LDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTD-LKANQS 383
Query: 378 ITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FGAAAIHGD 436
I Q IE++P +K+ RL +L+ GSKI+IF TK+ CDQ+ R L + A AIHGD
Sbjct: 384 INQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGD 443
Query: 437 KSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIR 473
K+Q+ERD VL++F++GRSP++ ATDVAARGL IR
Sbjct: 444 KTQSERDRVLAEFKSGRSPIMTATDVAARGLVSSGIR 480
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 332 bits (851), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 165/403 (40%), Positives = 253/403 (62%), Gaps = 7/403 (1%)
Query: 140 SYRRRHEITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDI 199
+YR+ E+ V G +VP P + TGL +IL ++ + P PIQ Q+ PI + RD
Sbjct: 510 TYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDC 569
Query: 200 VAIAKTGSGKTLGYLIPAFFHLK-RTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSS 258
+ +AKTGSGKTLG+++P H+K + + GP LV++PTREL QI + KF K
Sbjct: 570 IGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPL 629
Query: 259 RISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDIL---EMRRISLHQISYLVLDEAD 315
I CV +YGG+ Q+ +++RG +IVV TPGR+ DIL + +L ++++LV+DEAD
Sbjct: 630 GIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEAD 689
Query: 316 RMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVAN 375
RM DMGFEPQI +I+ + RQT++++AT+P++V +A +L PV++ +G V N
Sbjct: 690 RMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGG--RSVVN 747
Query: 376 KSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FGAAAIH 434
K ITQ +EV P +D+ RL ++L + KI++F +++ CD L R++ + + ++H
Sbjct: 748 KDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLH 807
Query: 435 GDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXX 494
G K Q +R+ +S F+ +L+AT VAARGLD+K++ +VVN+D P EDYVHR+
Sbjct: 808 GGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRT 867
Query: 495 XXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSELRDMS 537
A TF +E DAKYA DL+K LE + Q VP +L+ ++
Sbjct: 868 GRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKALA 910
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 165/403 (40%), Positives = 253/403 (62%), Gaps = 7/403 (1%)
Query: 140 SYRRRHEITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDI 199
+YR+ E+ V G +VP P + TGL +IL ++ + P PIQ Q+ PI + RD
Sbjct: 172 TYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDC 231
Query: 200 VAIAKTGSGKTLGYLIPAFFHLK-RTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSS 258
+ +AKTGSGKTLG+++P H+K + + GP LV++PTREL QI + KF K
Sbjct: 232 IGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPL 291
Query: 259 RISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDIL---EMRRISLHQISYLVLDEAD 315
I CV +YGG+ Q+ +++RG +IVV TPGR+ DIL + +L ++++LV+DEAD
Sbjct: 292 GIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEAD 351
Query: 316 RMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVAN 375
RM DMGFEPQI +I+ + RQT++++AT+P++V +A +L PV++ +G V N
Sbjct: 352 RMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGG--RSVVN 409
Query: 376 KSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FGAAAIH 434
K ITQ +EV P +D+ RL ++L + KI++F +++ CD L R++ + + ++H
Sbjct: 410 KDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLH 469
Query: 435 GDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXX 494
G K Q +R+ +S F+ +L+AT VAARGLD+K++ +VVN+D P EDYVHR+
Sbjct: 470 GGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRT 529
Query: 495 XXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSELRDMS 537
A TF +E DAKYA DL+K LE + Q VP +L+ ++
Sbjct: 530 GRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKALA 572
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/404 (43%), Positives = 243/404 (60%), Gaps = 19/404 (4%)
Query: 147 ITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTG 206
I SGDNVPPP +F L + +Q + PTP+Q + PI RD++A A+TG
Sbjct: 134 IETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTG 193
Query: 207 SGKTLGYLIPAFF------HLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRI 260
SGKT + P H++R + P ++LSPTRELA QI DEA KF + +
Sbjct: 194 SGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGV 253
Query: 261 SCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDM 320
V YGG P Q+R++ERG DI+VATPGRLND+LE R+SL + +L LDEADRMLDM
Sbjct: 254 KVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDM 313
Query: 321 GFEPQIRKIVNEV----PARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANK 376
GFEPQIRKIV ++ P RQT++++AT+P+E++++A+D L N + + +G V +
Sbjct: 314 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGS--STD 371
Query: 377 SITQHIEVLPPTDKHRRLEQILRSQ----DQGSK--IIIFCSTKKMCDQLARNLT-RQFG 429
I Q +E + +DK L +L +Q +QG + ++F TKK D L L F
Sbjct: 372 LIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFP 431
Query: 430 AAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVH 489
A IHGD+SQ ER+ L F+TGR+P+LVATDVAARGLDI + VVN+D P ++DYVH
Sbjct: 432 ATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 491
Query: 490 RIXXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSEL 533
RI LA FF + + A L ++++ ANQ VP L
Sbjct: 492 RIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWL 535
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/402 (43%), Positives = 248/402 (61%), Gaps = 17/402 (4%)
Query: 147 ITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTG 206
+ SG +VPPP +F L + ++ + PTP+Q + PI L RD++A A+TG
Sbjct: 139 VETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTG 198
Query: 207 SGKTLGYLIPAFF------HLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRI 260
SGKT + P H++R + + P ++LSPTRELA QI DEA KF + +
Sbjct: 199 SGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGV 258
Query: 261 SCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDM 320
V YGG P QLR++ERG DI+VATPGRLND+LE R+S+ I +L LDEADRMLDM
Sbjct: 259 KVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 318
Query: 321 GFEPQIRKIVNE--VPAR--RQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANK 376
GFEPQIRKIV + +P R RQT++++AT+P +++++AAD + N + + +G V +
Sbjct: 319 GFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGS--STD 376
Query: 377 SITQHIEVLPPTDKHRRLEQIL----RSQDQGSKIIIFCSTKKMCDQLARNLT-RQFGAA 431
ITQ +E + +DK L +L +QD+ S ++F TK+ D L L +F A
Sbjct: 377 LITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPAT 436
Query: 432 AIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 491
+IHGD++Q ER+ L F+TGR+P+LVATDVAARGLDI + VVN+D P ++DYVHRI
Sbjct: 437 SIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 496
Query: 492 XXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSEL 533
+A FF E +A+ A L ++++ ANQ VP L
Sbjct: 497 GRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWL 538
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/402 (43%), Positives = 248/402 (61%), Gaps = 17/402 (4%)
Query: 147 ITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTG 206
+ SG +VPPP +F L + ++ + PTP+Q + PI L RD++A A+TG
Sbjct: 139 VETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTG 198
Query: 207 SGKTLGYLIPAFF------HLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRI 260
SGKT + P H++R + + P ++LSPTRELA QI DEA KF + +
Sbjct: 199 SGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGV 258
Query: 261 SCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDM 320
V YGG P QLR++ERG DI+VATPGRLND+LE R+S+ I +L LDEADRMLDM
Sbjct: 259 KVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 318
Query: 321 GFEPQIRKIVNE--VPAR--RQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANK 376
GFEPQIRKIV + +P R RQT++++AT+P +++++AAD + N + + +G V +
Sbjct: 319 GFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGS--STD 376
Query: 377 SITQHIEVLPPTDKHRRLEQIL----RSQDQGSKIIIFCSTKKMCDQLARNLT-RQFGAA 431
ITQ +E + +DK L +L +QD+ S ++F TK+ D L L +F A
Sbjct: 377 LITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPAT 436
Query: 432 AIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 491
+IHGD++Q ER+ L F+TGR+P+LVATDVAARGLDI + VVN+D P ++DYVHRI
Sbjct: 437 SIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 496
Query: 492 XXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSEL 533
+A FF E +A+ A L ++++ ANQ VP L
Sbjct: 497 GRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWL 538
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/402 (43%), Positives = 248/402 (61%), Gaps = 17/402 (4%)
Query: 147 ITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTG 206
+ SG +VPPP +F L + ++ + PTP+Q + PI L RD++A A+TG
Sbjct: 139 VETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTG 198
Query: 207 SGKTLGYLIPAFF------HLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRI 260
SGKT + P H++R + + P ++LSPTRELA QI DEA KF + +
Sbjct: 199 SGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGV 258
Query: 261 SCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDM 320
V YGG P QLR++ERG DI+VATPGRLND+LE R+S+ I +L LDEADRMLDM
Sbjct: 259 KVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 318
Query: 321 GFEPQIRKIVNE--VPAR--RQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANK 376
GFEPQIRKIV + +P R RQT++++AT+P +++++AAD + N + + +G V +
Sbjct: 319 GFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGS--STD 376
Query: 377 SITQHIEVLPPTDKHRRLEQIL----RSQDQGSKIIIFCSTKKMCDQLARNLT-RQFGAA 431
ITQ +E + +DK L +L +QD+ S ++F TK+ D L L +F A
Sbjct: 377 LITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPAT 436
Query: 432 AIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 491
+IHGD++Q ER+ L F+TGR+P+LVATDVAARGLDI + VVN+D P ++DYVHRI
Sbjct: 437 SIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 496
Query: 492 XXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSEL 533
+A FF E +A+ A L ++++ ANQ VP L
Sbjct: 497 GRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWL 538
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 178/404 (44%), Positives = 248/404 (61%), Gaps = 19/404 (4%)
Query: 147 ITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTG 206
I SGDNVPPP +F L + ++ + PTP+Q + PI L+ RD++A A+TG
Sbjct: 147 IETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTG 206
Query: 207 SGKTLGYLIPAFF------HLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRI 260
SGKT + P H++R + + P ++LSPTRELA+QI DEA KF + +
Sbjct: 207 SGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGV 266
Query: 261 SCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDM 320
V YGG P QLR++ERG DI+VATPGRLND+LE R+S+ I +L LDEADRMLDM
Sbjct: 267 KVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 326
Query: 321 GFEPQIRKIVNE--VPAR--RQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANK 376
GFEPQIRKIV + +P R RQTL+++AT+P+E++++AAD L N + + +G V +
Sbjct: 327 GFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGS--STD 384
Query: 377 SITQHIEVLPPTDKHRRLEQILRSQD----QGSK--IIIFCSTKKMCDQLARNLT-RQFG 429
I Q +E + +DK L +L +Q QG + ++F TK+ D L L F
Sbjct: 385 LIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFP 444
Query: 430 AAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVH 489
A +IHGD++Q ER+ L F++GR+P+LVATDVAARGLDI + VVN+D P ++DYVH
Sbjct: 445 ATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 504
Query: 490 RIXXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSEL 533
RI LA FF + + A L ++++ ANQ VP L
Sbjct: 505 RIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEVPEWL 548
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 182/423 (43%), Positives = 254/423 (60%), Gaps = 21/423 (4%)
Query: 129 ASDAGAGLSPESYRRRHEITVSGDNVP----PPFTSFGSTGLPPEILKEVQNAGFSAPTP 184
A D G G S + ++ V+G V +F + LP +L + F P+P
Sbjct: 87 AEDLGEGES-----EQQKVVVTGKGVEEAKYAALKTFAESNLPENVLDCCKT--FEKPSP 139
Query: 185 IQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHL-----KRTGNNSKMGPTVLVLSP 239
IQ+ +WP L RD++ IAKTGSGKTL + IPA H+ K G + K+ PT LVLSP
Sbjct: 140 IQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSP 199
Query: 240 TRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMR 299
TRELA QI D + G+ + +C+YGG+ KGPQ+ I G DIV+ TPGRL D++E
Sbjct: 200 TRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESN 259
Query: 300 RISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLL- 358
+ L +S++VLDEADRMLDMGFE +R I++ RQ +M++ATWP +V K+A + +
Sbjct: 260 VLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQEFMD 319
Query: 359 VNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRS--QDQGSKIIIFCSTKKM 416
NP++V IG+VD L AN + Q IEVL + +RL +L + Q +++++F K
Sbjct: 320 PNPIKVIIGSVD-LAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLVFALYKVE 378
Query: 417 CDQLARNL-TRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVV 475
++L R L R + A +IHG+K+Q+ER LS F+ G P+LVATDVAARGLDI D+ VV
Sbjct: 379 AERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVV 438
Query: 476 VNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSELRD 535
+NY FP EDYVHRI +A+TFF + A +L+ VL A Q VP++L
Sbjct: 439 INYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLAGELVNVLREAGQVVPADLLK 498
Query: 536 MST 538
T
Sbjct: 499 FGT 501
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 315 bits (808), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 169/403 (41%), Positives = 252/403 (62%), Gaps = 10/403 (2%)
Query: 141 YRRRHEITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIV 200
YR+R I VSG +V P +F G +I+ ++ + PT IQ Q+ PI L RD++
Sbjct: 210 YRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVI 269
Query: 201 AIAKTGSGKTLGYLIPAFFHLKRTGNNSK-MGPTVLVLSPTRELATQIQDEAVKFGKSSR 259
IAKTGSGKT +++P H+ + GP ++ +PTRELA QI EA KF K+
Sbjct: 270 GIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYG 329
Query: 260 ISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLD 319
+ +YGG K Q ++++ G +IVVATPGRL D+L+M+ +++ + SYLVLDEADRM D
Sbjct: 330 LRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFD 389
Query: 320 MGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSIT 379
+GFEPQ+R IV ++ RQTL+++AT P +V K+A ++L +P++V +G V +AN+ IT
Sbjct: 390 LGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVG--MANEDIT 447
Query: 380 QHIEVLPPTDKHR---RLEQILRSQDQGSKIIIFCSTKKMCDQLARNLT-RQFGAAAIHG 435
Q + V+ P+D + LE++ D+G +++F S K D++ LT F AA+HG
Sbjct: 448 QVVNVI-PSDAEKLPWLLEKLPGMIDEGD-VLVFASKKATVDEIEAQLTLNSFKVAALHG 505
Query: 436 DKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI-XXX 494
DK QA R L +F++G VL+ATDVAARGLDIK ++ VVNYD ++ +VHRI
Sbjct: 506 DKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTG 565
Query: 495 XXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSELRDMS 537
+AYT +++A++A +L+ L A Q VP EL D++
Sbjct: 566 RAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTDLA 608
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 295 bits (756), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 155/399 (38%), Positives = 237/399 (59%), Gaps = 34/399 (8%)
Query: 140 SYRRRHEITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDI 199
+YR+ E+ V G +VP P + TGL +IL ++ + P PIQAQ+ PI + RD
Sbjct: 377 AYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDC 436
Query: 200 VAIAKTGSGKTLGYLIPAFFHLK-RTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSS 258
+ +AKTGSGKTLG+++P H+K + + GP LV++PTREL QI + KF K+
Sbjct: 437 IGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKAL 496
Query: 259 RISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDIL---EMRRISLHQISYLVLDEAD 315
I CV +YGG+ Q+ +++RG +IVV TPGR+ DIL + +L +++YLV+DEAD
Sbjct: 497 GIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEAD 556
Query: 316 RMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVAN 375
RM DMGFEPQI +IV + RQT++++AT+P++V +A +L PV++ +G V N
Sbjct: 557 RMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGG--RSVVN 614
Query: 376 KSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHG 435
K ITQ +E+ P +++ RL ++L + K+++F ++
Sbjct: 615 KDITQLVEIRPESERFSRLLELLGEWYEKGKVLVFVRSQ--------------------- 653
Query: 436 DKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXX 495
+ +S F++ +L+AT VAARGLD+K++ +VVN+D P EDYVHR+
Sbjct: 654 -------EKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTG 706
Query: 496 XXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSELR 534
A TF +E DAKYA DL+K LE + Q VP +++
Sbjct: 707 RAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDVK 745
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/416 (38%), Positives = 234/416 (56%), Gaps = 27/416 (6%)
Query: 141 YRRRHEITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIV 200
+R I+ G +P P S+ + L E+LK V+ AG+ P+PIQ + P+ LQ RD++
Sbjct: 295 FREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVI 354
Query: 201 AIAKTGSGKTLGYLIPAFFHLKR----TGNNSKMGPTVLVLSPTRELATQIQDEAVKFGK 256
IA+TGSGKT +++P ++ R + N GP +V++PTRELA QI++E VKF
Sbjct: 355 GIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAH 414
Query: 257 SSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADR 316
+ GG Q I +G +IV+ATPGRL D LE R L+Q +Y+VLDEADR
Sbjct: 415 YLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 474
Query: 317 MLDMGFEPQIRKIVNEVPAR-----------------RQTLMYTATWPKEVRKIAADLLV 359
M+DMGFEPQ+ +++ +P+ R T M++AT P V ++A L
Sbjct: 475 MIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLR 534
Query: 360 NPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKI-IIFCSTKKMCD 418
NPV V IG + I+QH+ ++ ++K RL+++L + G K I+F +TKK CD
Sbjct: 535 NPVVVTIGTAGK--TTDLISQHVIMMKESEKFFRLQKLL--DELGEKTAIVFVNTKKNCD 590
Query: 419 QLARNLTRQ-FGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVN 477
+A+NL + + +HG KSQ +R+ L FR R VLVATDV RG+DI D+ V+N
Sbjct: 591 SIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVIN 650
Query: 478 YDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSEL 533
YD P +E Y HRI +A +F D + DL ++L +N VP EL
Sbjct: 651 YDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVPPEL 706
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/408 (37%), Positives = 228/408 (55%), Gaps = 16/408 (3%)
Query: 142 RRRHEITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVA 201
R++ ITV+G+++PPP +F P +L+ +++ G PTPIQ Q P+ L RD++
Sbjct: 80 RKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIG 139
Query: 202 IAKTGSGKTLGYLIPAFFHLKRTGNNSKM----GPTVLVLSPTRELATQIQDEAVKFGKS 257
IA TGSGKTL +++P + + GP LV+ P+RELA Q D +F S
Sbjct: 140 IAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVAS 199
Query: 258 ------SRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQISYLVL 311
R+ + GG QL +++G IVVATPGRL DIL +++SL L L
Sbjct: 200 LVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTL 259
Query: 312 DEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDE 371
DEADR++D+GFE IR + + ++RQTL+++AT P +++ A LV PV VN+G
Sbjct: 260 DEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAG- 318
Query: 372 LVANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARN-LTRQFGA 430
AN + Q +E + K L + L Q ++IFC K D + L + A
Sbjct: 319 -AANLDVIQEVEYVKQEAKIVYLLECL--QKTTPPVLIFCENKADVDDIHEYLLLKGVEA 375
Query: 431 AAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHR 490
AIHG K Q +RD+ +S F+ G+ VLVATDVA++GLD DI+ V+NYD P +E+YVHR
Sbjct: 376 VAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHR 435
Query: 491 IXXXXXXXXXXLAYTFFAEQDAKYA-SDLIKVLEGANQRVPSELRDMS 537
I +A TF + ++ DL +L+ A QR+P L +++
Sbjct: 436 IGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELN 483
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 154/409 (37%), Positives = 227/409 (55%), Gaps = 18/409 (4%)
Query: 142 RRRHEITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVA 201
R++ I V+GD++PPP +F P +L ++ G PTPIQ Q P+ L RD++
Sbjct: 129 RKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIG 188
Query: 202 IAKTGSGKTLGYLIPAFFHLKRTGNNSKM----GPTVLVLSPTRELATQIQDEAVKF--- 254
IA TGSGKTL +++P + + GP L++ P+RELA Q + +F
Sbjct: 189 IAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAP 248
Query: 255 ----GKSSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQISYLV 310
G S +C+ GG QL ++RG IVVATPGRL D+L +++SL YL
Sbjct: 249 LVEAGYPPLRSLLCI-GGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLT 307
Query: 311 LDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVD 370
LDEADR++D+GFE IR++ + ++RQTL+++AT P +++ A LV PV VN+G
Sbjct: 308 LDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAG 367
Query: 371 ELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARN-LTRQFG 429
AN + Q +E + K L + L Q ++IFC K D + L +
Sbjct: 368 --AANLDVIQEVEYVKQEAKIVYLLECL--QKTSPPVLIFCENKADVDDIHEYLLLKGVE 423
Query: 430 AAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVH 489
A AIHG K Q +R++ +S F+ G+ VLVATDVA++GLD DI+ V+NYD P +E+YVH
Sbjct: 424 AVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVH 483
Query: 490 RIXXXXXXXXXXLAYTFFAE-QDAKYASDLIKVLEGANQRVPSELRDMS 537
RI +A TF + Q DL +L+ A QR+P L +++
Sbjct: 484 RIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELN 532
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 232/432 (53%), Gaps = 18/432 (4%)
Query: 117 ATGNVSSVKDQGASDAGAGLSPESYRRRHEITVSGDN--VPPPFTSFGSTGLPPEILKEV 174
AT V+D G+S A L RR+ +I V G VPPP +F S GLPP++L +
Sbjct: 70 ATDECFYVRDPGSSSHDAQL----LRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNL 125
Query: 175 QNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAF-----FHLKRTGNNSK 229
+ AG+ PTPIQ Q+ P AL + ++A A TGSGKT +L+P +H + + +
Sbjct: 126 ETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRR 185
Query: 230 MGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERGADIVVATP 289
P +VL+PTREL Q++D+A GK + GG P QL I++G ++++ TP
Sbjct: 186 -NPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTP 244
Query: 290 GRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKE 349
GR+ D+L I L I VLDE D ML GF Q+ +I + ++ Q L+++AT +E
Sbjct: 245 GRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISRE 303
Query: 350 VRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGS-KII 408
V K+ L + V+IGN ++ NK++ Q + K ++L ILRSQ+ +
Sbjct: 304 VEKVGGSLAKEIILVSIGNPNK--PNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAV 361
Query: 409 IFCSTKKMCDQLARNLTRQFG--AAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARG 466
++ S++ D LA +T G A +IHG+K ER V+ F G PVLV+T V RG
Sbjct: 362 VYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRG 421
Query: 467 LDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGAN 526
+D+ +R V+ +D P+ +++Y+H I A F E D DL+ L+ +
Sbjct: 422 VDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSG 481
Query: 527 QRVPSELRDMST 538
+P EL ++++
Sbjct: 482 AAIPKELINLTS 493
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 232/432 (53%), Gaps = 18/432 (4%)
Query: 117 ATGNVSSVKDQGASDAGAGLSPESYRRRHEITVSGDN--VPPPFTSFGSTGLPPEILKEV 174
AT V+D G+S A L RR+ +I V G VPPP +F S GLPP++L +
Sbjct: 70 ATDECFYVRDPGSSSHDAQL----LRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNL 125
Query: 175 QNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAF-----FHLKRTGNNSK 229
+ AG+ PTPIQ Q+ P AL + ++A A TGSGKT +L+P +H + + +
Sbjct: 126 ETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRR 185
Query: 230 MGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERGADIVVATP 289
P +VL+PTREL Q++D+A GK + GG P QL I++G ++++ TP
Sbjct: 186 -NPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTP 244
Query: 290 GRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKE 349
GR+ D+L I L I VLDE D ML GF Q+ +I + ++ Q L+++AT +E
Sbjct: 245 GRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISRE 303
Query: 350 VRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGS-KII 408
V K+ L + V+IGN ++ NK++ Q + K ++L ILRSQ+ +
Sbjct: 304 VEKVGGSLAKEIILVSIGNPNK--PNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAV 361
Query: 409 IFCSTKKMCDQLARNLTRQFG--AAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARG 466
++ S++ D LA +T G A +IHG+K ER V+ F G PVLV+T V RG
Sbjct: 362 VYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRG 421
Query: 467 LDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGAN 526
+D+ +R V+ +D P+ +++Y+H I A F E D DL+ L+ +
Sbjct: 422 VDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSG 481
Query: 527 QRVPSELRDMST 538
+P EL ++++
Sbjct: 482 AAIPKELINLTS 493
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 224/390 (57%), Gaps = 18/390 (4%)
Query: 108 FSSHPNGTHATGNVSSVKDQGASDAGAGLSPESYRRRHEI-TVSGDNVPPPFTSFGSTGL 166
F G H + S AG +S S RR + +V GD + + G+
Sbjct: 57 FGVEAKGIHFQSGPLDFRASMVSQAGFAISESSERRVGDSESVGGDGL-----AISELGI 111
Query: 167 PPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGN 226
PEI+K + + G PIQ A++ RD++ A+TG+GKTL + IP + +
Sbjct: 112 SPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKY-- 169
Query: 227 NSKMG----PTVLVLSPTRELATQIQDEAVKFGKSS-RISCVCLYGGAPKGPQLRDIERG 281
N+K G P LVL+PTRELA Q++ E F +S+ + +CLYGG P G Q+R ++ G
Sbjct: 170 NAKHGRGRNPLCLVLAPTRELARQVEKE---FRESAPSLDTICLYGGTPIGQQMRQLDYG 226
Query: 282 ADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLM 341
D+ V TPGR+ D+++ ++L ++ ++VLDEAD+ML +GF + I+ ++P +RQ++M
Sbjct: 227 VDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMM 286
Query: 342 YTATWPKEVRKIAADLLVNPVQVN-IGNVDELVANKSITQHIEVLPPTDKHRRLEQILRS 400
++AT P +R + L NP+ V+ +G+ D+ +A+ IT + + + + ++
Sbjct: 287 FSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLAD-GITTYSIIADSYGRASIIGPLVTE 345
Query: 401 QDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVAT 460
+G K I+F TK+ D+L+ L R F A+HGD SQ++R+ L+ FR G +LVAT
Sbjct: 346 HAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVAT 405
Query: 461 DVAARGLDIKDIRVVVNYDFPTGVEDYVHR 490
DVAARGLD+ ++ ++++Y+ P E +VHR
Sbjct: 406 DVAARGLDVPNVDLIIHYELPNNTETFVHR 435
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 242 bits (617), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 206/332 (62%), Gaps = 12/332 (3%)
Query: 165 GLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRT 224
G+ PEI+K ++ G PIQ A++ RD++ A+TG+GKTL + IP + +
Sbjct: 122 GISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKF 181
Query: 225 GNNSKMG----PTVLVLSPTRELATQIQDEAVKFGKSS-RISCVCLYGGAPKGPQLRDIE 279
N+K G P LVL+PTRELA Q++ E F +S+ + +CLYGG P G Q+R++
Sbjct: 182 --NAKHGRGKNPQCLVLAPTRELARQVEKE---FRESAPSLDTICLYGGTPIGQQMRELN 236
Query: 280 RGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQT 339
G D+ V TPGR+ D+++ ++L ++ ++VLDEAD+ML +GF + I+ ++PA+RQ+
Sbjct: 237 YGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQS 296
Query: 340 LMYTATWPKEVRKIAADLLVNPVQVN-IGNVDELVANKSITQHIEVLPPTDKHRRLEQIL 398
+M++AT P +R + L NP+ ++ +G+ D+ +A+ IT + + + ++
Sbjct: 297 MMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLAD-GITMYSIAADSYGRASIIGPLV 355
Query: 399 RSQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLV 458
+ +G K I+F TK+ D+LA L + + A+HGD SQA+R+ L+ FR G +LV
Sbjct: 356 KEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILV 415
Query: 459 ATDVAARGLDIKDIRVVVNYDFPTGVEDYVHR 490
ATDVAARGLD+ ++ +V++Y+ P E +VHR
Sbjct: 416 ATDVAARGLDVPNVDLVIHYELPNNTETFVHR 447
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 236 bits (601), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/332 (39%), Positives = 197/332 (59%), Gaps = 10/332 (3%)
Query: 166 LPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTG 225
LP + + ++ G + PIQ ALQ RDI+A AKTG+GKTL + IP L
Sbjct: 109 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 168
Query: 226 NN------SKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIE 279
+ S P LVL+PTRELA Q++ E + + +S VC+YGG Q +
Sbjct: 169 GDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVSYTIQQSALT 226
Query: 280 RGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQT 339
RG D+VV TPGR+ D++E R + L ++ YLVLDEAD+ML +GFE + I+ +P +RQ+
Sbjct: 227 RGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQS 286
Query: 340 LMYTATWPKEVRKIAADLLVNPVQVN-IGNVDELVANKSITQHIEVLPPTDKHRRLEQIL 398
++++AT P V+K+A L NP+ ++ +G+ DE +A + I + T K L ++
Sbjct: 287 MLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLA-EGIKLYAIATTSTSKRTILSDLI 345
Query: 399 RSQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLV 458
+G K I+F TK+ D+++ L+ A+HGD SQ +R+ L+ FR G+ VLV
Sbjct: 346 TVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLV 405
Query: 459 ATDVAARGLDIKDIRVVVNYDFPTGVEDYVHR 490
ATDVA+RGLDI ++ +V++Y+ P E +VHR
Sbjct: 406 ATDVASRGLDIPNVDLVIHYELPNDPETFVHR 437
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 236 bits (601), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/332 (39%), Positives = 197/332 (59%), Gaps = 10/332 (3%)
Query: 166 LPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTG 225
LP + + ++ G + PIQ ALQ RDI+A AKTG+GKTL + IP L
Sbjct: 109 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 168
Query: 226 NN------SKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIE 279
+ S P LVL+PTRELA Q++ E + + +S VC+YGG Q +
Sbjct: 169 GDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVSYTIQQSALT 226
Query: 280 RGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQT 339
RG D+VV TPGR+ D++E R + L ++ YLVLDEAD+ML +GFE + I+ +P +RQ+
Sbjct: 227 RGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQS 286
Query: 340 LMYTATWPKEVRKIAADLLVNPVQVN-IGNVDELVANKSITQHIEVLPPTDKHRRLEQIL 398
++++AT P V+K+A L NP+ ++ +G+ DE +A + I + T K L ++
Sbjct: 287 MLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLA-EGIKLYAIATTSTSKRTILSDLI 345
Query: 399 RSQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLV 458
+G K I+F TK+ D+++ L+ A+HGD SQ +R+ L+ FR G+ VLV
Sbjct: 346 TVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLV 405
Query: 459 ATDVAARGLDIKDIRVVVNYDFPTGVEDYVHR 490
ATDVA+RGLDI ++ +V++Y+ P E +VHR
Sbjct: 406 ATDVASRGLDIPNVDLVIHYELPNDPETFVHR 437
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 204/392 (52%), Gaps = 33/392 (8%)
Query: 170 ILKEVQNAGF---SAPTPIQ--AQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRT 224
I KE N + P P++ ++ P+ L+ RD++ I+ TGSGKT +++P ++ R
Sbjct: 208 IFKEDFNISYRGSKIPHPMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRL 267
Query: 225 ----GNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIER 280
N GP LV+ PTRELA QI++E VKF + V + G Q + +
Sbjct: 268 PPMREENQTEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQ 327
Query: 281 GADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPAR---- 336
G +IV+ATPGRL D LE R + L+Q +YLVLDEADRM+DM FEPQ+ ++++ +P
Sbjct: 328 GCEIVIATPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKP 387
Query: 337 -------------RQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIE 383
R T M++AT V ++A L NPV V IG K ITQ +
Sbjct: 388 EKEDEELEEKKIYRTTYMFSATMLLSVERLARKFLRNPVVVTIGE-----TTKFITQQVI 442
Query: 384 VLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTR--QFGAAAIHGDKSQAE 441
+ +DK RL++++ I+F +T+ D + +NL + + +H KSQ +
Sbjct: 443 MTKESDKFSRLKKLIDDLGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQ 502
Query: 442 RDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXX 501
RD+ L +F+ R VLV TDV RGLDI D+ V+NYD P ++ Y HRI
Sbjct: 503 RDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTG 562
Query: 502 LAYTFFAEQDAKYASDLIKVLEGANQRVPSEL 533
+A TF +D L + L N VP EL
Sbjct: 563 VATTFLTLEDKDVFYGLKQKLNECNSLVPPEL 594
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 228 bits (582), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 186/305 (60%), Gaps = 10/305 (3%)
Query: 193 ALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGNN------SKMGPTVLVLSPTRELATQ 246
ALQ RDI+A AKTG+GKTL + IP L + S P LVL+PTRELA Q
Sbjct: 43 ALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQ 102
Query: 247 IQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQI 306
++ E + + +S VC+YGG Q + RG D+VV TPGR+ D++E R + L ++
Sbjct: 103 VEKEIKE--SAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEV 160
Query: 307 SYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVN- 365
YLVLDEAD+ML +GFE + I+ +P +RQ+++++AT P V+K+A L NP+ ++
Sbjct: 161 EYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDL 220
Query: 366 IGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLT 425
+G+ DE +A + I + T K L ++ +G K I+F TK+ D+++ L+
Sbjct: 221 VGDQDEKLA-EGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALS 279
Query: 426 RQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVE 485
A+HGD SQ +R+ L+ FR G+ VLVATDVA+RGLDI ++ +V++Y+ P E
Sbjct: 280 NSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPE 339
Query: 486 DYVHR 490
+VHR
Sbjct: 340 TFVHR 344
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 204/400 (51%), Gaps = 21/400 (5%)
Query: 142 RRRHEITVSGDNVPPPFTSFGST----GLPPEILKEVQNAGFSAPTPIQAQSWPIALQSR 197
R+++ I VSG+N+PPP SF G IL+ + GF PTPIQ Q+ PI L R
Sbjct: 120 RKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGR 179
Query: 198 DIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKS 257
+ A A TGSGKT ++ P LKR + G ++LSP RELA Q E K K
Sbjct: 180 ECFACAPTGSGKTFAFICPMLIKLKRPSTD---GIRAVILSPARELAAQTAREGKKLIKG 236
Query: 258 SRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRM 317
S + K + D++++TP RL ++ ++I L ++ YLVLDE+D++
Sbjct: 237 SNFHIRLMTKPLVKTADFSKL--WCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKL 294
Query: 318 LDMGFEPQIRKIVNEV--PARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVAN 375
+ QI +V P+ ++L ++AT P V ++A ++ + V+V IG + A+
Sbjct: 295 FEQSLLKQIDCVVKACSNPSIIRSL-FSATLPDSVEELARSIMHDAVRVIIGRKN--TAS 351
Query: 376 KSITQHIEVLPPTDKHRRLEQILR---SQDQGSKIIIFCSTKKMCDQLARNL-TRQFGAA 431
+++ Q + V +++ + L LR ++ ++IF +K+ +L L A
Sbjct: 352 ETVKQKL-VFAGSEEGKLLA--LRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAG 408
Query: 432 AIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 491
IH D ER++ + QFR G VL+ATDV ARG+D K I V+NYDFP Y+HRI
Sbjct: 409 VIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRI 468
Query: 492 XXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPS 531
A TF+ EQD + ++ + + VPS
Sbjct: 469 GRSGRAGRSGEAITFYTEQDVPFLRNIANTMMSSGCEVPS 508
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 196/381 (51%), Gaps = 7/381 (1%)
Query: 157 PFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIP 216
P TSF G+ ++L+ V GF P+ IQ ++ LQ RD++A A++G+GKT +I
Sbjct: 33 PITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKT--SMIA 90
Query: 217 AFFHLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLR 276
+ + + S L+LSPTRELATQ + G + I GG G +R
Sbjct: 91 --LSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIR 148
Query: 277 DIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPAR 336
+E G +V TPGR+ D+++ R + I L+LDE+D ML GF+ QI + +P
Sbjct: 149 KLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPD 208
Query: 337 RQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQ 396
Q + +AT P E+ ++ + + PV++ + DEL + I Q + +
Sbjct: 209 LQVCLVSATLPHEILEMTSKFMTEPVKILVKR-DELTL-EGIKQFFVAVEKEEWKFDTLC 266
Query: 397 ILRSQDQGSKIIIFCSTKKMCDQLARNL-TRQFGAAAIHGDKSQAERDHVLSQFRTGRSP 455
L ++ +IFC+TK+ D L+ + + F +++HGD Q ERD ++++FR+G S
Sbjct: 267 DLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSR 326
Query: 456 VLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYA 515
VL+ TDV ARG+D++ + +V+NYD P E Y+HRI +A F D K
Sbjct: 327 VLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKIL 386
Query: 516 SDLIKVLEGANQRVPSELRDM 536
D+ + +P + D+
Sbjct: 387 RDIEQYYSTQIDEMPMNVADL 407
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 185/343 (53%), Gaps = 15/343 (4%)
Query: 160 SFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFF 219
+F G+ E++K + G+ P+ IQA++ P AL+ +D++ +A+TGSGKT + IP
Sbjct: 10 TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69
Query: 220 HLK--------RTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPK 271
L + G VLSPTRELA QI ++ G + C L GG +
Sbjct: 70 ALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDR 129
Query: 272 GPQLRDIERGADIVVATPGRLNDIL-EMRRISLHQISYLVLDEADRMLDMGFEPQIRKIV 330
Q + + ++VATPGRL D + + + SL + YLVLDEADR+L+ FE + +I+
Sbjct: 130 MQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQIL 189
Query: 331 NEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDK 390
E+P R+T +++AT K+VRK+ L NPV++ + V ++ Q + K
Sbjct: 190 EEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTV--DTLKQQYRFVAAKYK 247
Query: 391 HRRLEQILRSQDQGSKIIIF--CSTKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQ 448
L IL + + +I C + + R+L F A I G +Q++R L++
Sbjct: 248 DCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLG--FRAIPISGQMTQSKRLGALNK 305
Query: 449 FRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 491
F+ G +LV TDVA+RGLDI + VV+NYD PT +DY+HR+
Sbjct: 306 FKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRV 348
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 206/385 (53%), Gaps = 16/385 (4%)
Query: 161 FGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFH 220
F S L P + ++ G+ PTPIQ ++ P+ L D+VA+A+TGSGKT +LIP
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 221 LKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIER 280
LK+ + + G L+LSPTR+LA Q + GK + + L GG Q ++ +
Sbjct: 90 LKQ--HVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTK 147
Query: 281 GADIVVATPGRLNDIL-EMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQT 339
G D+++ATPGRL +L E+ ++L + Y+V DEAD + MGF Q+ +I+ ++ RQT
Sbjct: 148 GPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQT 207
Query: 340 LMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILR 399
L+++AT P + + A L P V + +++ + ++ + P +K+ L ++R
Sbjct: 208 LLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLS--FLTVRPEEKYSALLYLVR 265
Query: 400 ---SQDQGSKIIIFCSTKKMCDQLARNLTR--QFGAAAIHGDKSQAERDHVLSQFRTGRS 454
S DQ + +IF STK + +L + + +GD Q R +S+FR ++
Sbjct: 266 EHISSDQ--QTLIFVSTKHHV-EFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKT 322
Query: 455 PVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKY 514
+L+ TD+AARG+DI + V+N+DFP + +VHR+ AY+F +D Y
Sbjct: 323 MLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPEDMPY 382
Query: 515 ASDLIKVLEGANQRVPSE---LRDM 536
DL L + P+E L++M
Sbjct: 383 MLDLHLFLSKPVRPAPTEDEVLKNM 407
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 195/394 (49%), Gaps = 18/394 (4%)
Query: 122 SSVKDQGASDAGAGL---SPESYRRRHEITVSGDNVPPPFTSFGSTGLPPEILKEVQNAG 178
S V D + D A L +P++ R ++T + N F L E+L + G
Sbjct: 97 SEVIDPNSEDWKARLKLPAPDTRYRTEDVTATKGN------EFEDYFLKRELLMGIYEKG 150
Query: 179 FSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVLVLS 238
F P+PIQ +S PIAL RDI+A AK G+GKT + IP + + N + +++
Sbjct: 151 FERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQ----AVIIV 206
Query: 239 PTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEM 298
PTRELA Q + GK +I + GG + + + ++V TPGR+ D+ +
Sbjct: 207 PTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKK 266
Query: 299 RRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLL 358
L S LV+DEAD++L F+P + +++ +P RQ LM++AT+P V+ L
Sbjct: 267 GVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFL 326
Query: 359 VNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCD 418
NP +N+ +DEL K ITQ + K L + S+ Q ++ IIFC++ +
Sbjct: 327 TNPYVINL--MDELTL-KGITQFYAFVEERQKIHCLNTLF-SKLQINQSIIFCNSVNRVE 382
Query: 419 QLARNLTRQ-FGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVN 477
LA+ +T + IH Q R+ V FR G LV TD+ RG+DI+ + VV+N
Sbjct: 383 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 442
Query: 478 YDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQD 511
+DFP E Y+HR+ LA +D
Sbjct: 443 FDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 476
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 195/394 (49%), Gaps = 18/394 (4%)
Query: 122 SSVKDQGASDAGAGL---SPESYRRRHEITVSGDNVPPPFTSFGSTGLPPEILKEVQNAG 178
S V D + D A L +P++ R ++T + N F L E+L + G
Sbjct: 97 SEVIDPNSEDWKARLKLPAPDTRYRTEDVTATKGN------EFEDYFLKRELLMGIYEKG 150
Query: 179 FSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVLVLS 238
F P+PIQ +S PIAL RDI+A AK G+GKT + IP + + N + +++
Sbjct: 151 FERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQ----AVIIV 206
Query: 239 PTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEM 298
PTRELA Q + GK +I + GG + + + ++V TPGR+ D+ +
Sbjct: 207 PTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKK 266
Query: 299 RRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLL 358
L S LV+DEAD++L F+P + +++ +P RQ LM++AT+P V+ L
Sbjct: 267 GVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFL 326
Query: 359 VNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCD 418
NP +N+ +DEL K ITQ + K L + S+ Q ++ IIFC++ +
Sbjct: 327 TNPYVINL--MDELTL-KGITQFYAFVEERQKIHCLNTLF-SKLQINQSIIFCNSVNRVE 382
Query: 419 QLARNLTRQ-FGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVN 477
LA+ +T + IH Q R+ V FR G LV TD+ RG+DI+ + VV+N
Sbjct: 383 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 442
Query: 478 YDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQD 511
+DFP E Y+HR+ LA +D
Sbjct: 443 FDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 476
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 191/359 (53%), Gaps = 12/359 (3%)
Query: 188 QSWPIALQSRDIVAIAKTGSGKTLGYLIPAF-----FHLKRTGNNSKMGPTVLVLSPTRE 242
Q+ P AL + ++A A TGSGKT +L+P +H + + + P +VL+PTRE
Sbjct: 2 QAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRR-NPLAMVLAPTRE 60
Query: 243 LATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILEMRRIS 302
L Q++D+A GK + GG P QL I++G ++++ TPGR+ D+L I
Sbjct: 61 LCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIE 120
Query: 303 LHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPV 362
L I VLDE D ML GF Q+ +I + ++ Q L+++AT +EV K+ L +
Sbjct: 121 LDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISREVEKVGGSLAKEII 179
Query: 363 QVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGS-KIIIFCSTKKMCDQLA 421
V+IGN ++ NK++ Q + K ++L ILRSQ+ +++ S++ D LA
Sbjct: 180 LVSIGNPNK--PNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLA 237
Query: 422 RNLTRQFG--AAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYD 479
+T G A +IHG+K ER V+ F G PVLV+T V RG+D+ +R V+ +D
Sbjct: 238 NAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFD 297
Query: 480 FPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSELRDMST 538
P+ +++Y+H I A F E D DL+ L+ + +P EL ++++
Sbjct: 298 MPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELINLTS 356
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 189/331 (57%), Gaps = 18/331 (5%)
Query: 172 KEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKR--TGNNSK 229
++++ G A PIQA ++ + L D+V A+TG GKTL +++P L + K
Sbjct: 109 EKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSKRK 168
Query: 230 MG----PTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERGADIV 285
MG P+VLVL PTRELA Q+ + +G S +S CLYGG Q ++RG DIV
Sbjct: 169 MGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVDIV 228
Query: 286 VATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEV--PARRQTLMYT 343
V TPGR+ D +E + + + + VLDEAD ML MGF + I+ +V + QTL+++
Sbjct: 229 VGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTKVQTLLFS 288
Query: 344 ATWPKEVRKIAADLLV-NPVQVNIGNVDELVANKSITQHIEVLPPTDK---HRRLEQILR 399
AT P V+ I+ L + +++ D++ A+ S+ +HI + P +K R + I+
Sbjct: 289 ATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSV-RHIAI--PCNKAAMARLIPDIIS 345
Query: 400 SQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVA 459
G + IIF TK +L+ L G+ A+HG+ Q++R+ L+ FR G+ LVA
Sbjct: 346 CYSSGGQTIIFAETKVQVSELSGLLD---GSRALHGEIPQSQREVTLAGFRNGKFATLVA 402
Query: 460 TDVAARGLDIKDIRVVVNYDFPTGVEDYVHR 490
T+VAARGLDI D+++++ + P VE Y+HR
Sbjct: 403 TNVAARGLDINDVQLIIQCEPPREVEAYIHR 433
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/403 (34%), Positives = 194/403 (48%), Gaps = 56/403 (13%)
Query: 152 DNVPPPFTS-----------FGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIV 200
D P PF S F L +L+ + G+ PTPIQA P+AL RD+
Sbjct: 149 DATPKPFFSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLC 208
Query: 201 AIAKTGSGKTLGYLIPAF----FHLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGK 256
A A TGSGKT + +P F KR VL+L+PTRELA QI +
Sbjct: 209 ASAITGSGKTAAFALPTLERLLFRPKRV-----FATRVLILTPTRELAVQIHSMIQNLAQ 263
Query: 257 SSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDILE-MRRISLHQISYLVLDEAD 315
+ I C + GG Q + DIVVATPGR+ D L + L ++ L+LDEAD
Sbjct: 264 FTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEAD 323
Query: 316 RMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNI--------G 367
R+L GF +I ++V P RRQT++++AT +EV+++ L P++++ G
Sbjct: 324 RLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPG 383
Query: 368 NVDELVA---NKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNL 424
+E+V + Q +L L ++ SK+IIF TK Q A L
Sbjct: 384 LTEEVVRIRRTREANQEAVLLS-----------LCTRTFKSKVIIFSGTK----QAAHRL 428
Query: 425 TRQFG-----AAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYD 479
FG AA +HG+ +QA+R L FR L+ATDVAARGLDI ++ V+NY
Sbjct: 429 KILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYA 488
Query: 480 FPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDLIKVL 522
P ++ YVHR+ A TF + D L+KV+
Sbjct: 489 CPREIDSYVHRVGRTARAGREGYAVTFVTDSD----RSLLKVI 527
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 197/378 (52%), Gaps = 7/378 (1%)
Query: 157 PFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIP 216
P SF G+ ++L+ V + G+ P+ IQ ++ L+ RD++A A++G+GKT I
Sbjct: 20 PIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAIS 79
Query: 217 AFFHLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLR 276
+ N S VLVLSP+RELA+Q + G + I GG G ++
Sbjct: 80 VC----QIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIK 135
Query: 277 DIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPAR 336
+ERG V TPGR+ D+++ + + LVLDE+D ML G + QI + +P
Sbjct: 136 KLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHD 195
Query: 337 RQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQ 396
Q + +AT P+E+ ++ + +PV++ + DEL +++V K L
Sbjct: 196 IQVCLISATLPQEILEMTEKFMTDPVRILV-KPDELTLEGIKQYYVDVDKEEWKFDTLCD 254
Query: 397 ILRSQDQGSKIIIFCSTKKMCDQLARNL-TRQFGAAAIHGDKSQAERDHVLSQFRTGRSP 455
L + ++ IIFC+T++ D L + + F +++HGDK Q ERD +++QFR+ +S
Sbjct: 255 -LYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSR 313
Query: 456 VLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYA 515
VL+A+DV ARG+D++ + V+NYD P E Y+HRI +A F D K
Sbjct: 314 VLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDL 373
Query: 516 SDLIKVLEGANQRVPSEL 533
D+ + + +P++L
Sbjct: 374 KDIERHYGTKIREMPADL 391
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 194/356 (54%), Gaps = 32/356 (8%)
Query: 159 TSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAF 218
T F L P LK +++AGF T +Q + PI LQ +D++A AKTG+GKT+ +L+PA
Sbjct: 382 TRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAI 441
Query: 219 FHLKRT---GNNSKMGPT-VLVLSPTRELATQIQDEA---VKFGKSSRISCVCLYGGAPK 271
+ ++ +S+ P VLV+ PTRELA+Q EA +K+ S I + GG
Sbjct: 442 EAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPS--IGVQVVIGGTKL 499
Query: 272 GPQLRDIERG-ADIVVATPGRLNDILEMRR---ISLHQISYLVLDEADRMLDMGFEPQIR 327
+ R ++ I+VATPGRL D +E L + LVLDEAD +LDMGF I
Sbjct: 500 PTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIE 559
Query: 328 KIVNEVPARRQTLMYTATWPKEVRKIAADLL------VNPVQVNIGNVDELVANKSITQH 381
+I+ VP +RQT +++AT P+EVR+I L +N VQ G ++ +TQ
Sbjct: 560 RIIAAVPKQRQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGET-----HQKVTQ- 613
Query: 382 IEVLPPTDKHRRLEQILRSQ----DQGSKIIIFCSTKKMCDQLARNLTRQ--FGAAAIHG 435
+ ++ D+H L +L + + K+IIFC+T M +L +L Q IH
Sbjct: 614 MYMIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTT-AMVTRLVADLLSQLSLNVREIHS 672
Query: 436 DKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 491
K Q+ R V +FR ++ +LV +DV+ARG+D D+ +VV P+ E Y+HR+
Sbjct: 673 RKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRL 728
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 176/336 (52%), Gaps = 6/336 (1%)
Query: 160 SFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFF 219
+F S L K ++ GF+ T IQA++ P + D++ A+TGSGKTL +LIPA
Sbjct: 155 TFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVE 214
Query: 220 HLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIE 279
L R + G VLV+ PTRELA Q A + K + + GG + + +
Sbjct: 215 LLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILA 274
Query: 280 RGADIVVATPGRLNDILEMRR-ISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQ 338
+G +++VATPGRL D LE + +LV+DEADR+L+ FE ++KI+N +P RQ
Sbjct: 275 KGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQ 334
Query: 339 TLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQIL 398
T +++AT +V +A L +PV +++ + V N+ + Q V+P + L L
Sbjct: 335 TSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFL 394
Query: 399 RSQDQGSKIIIF---CSTKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSP 455
+ KI++F C + K +L R + +F I G Q +R QF +
Sbjct: 395 KRFQGKKKIMVFFSTCKSTKFHAELFRYI--KFDCLEIRGGIDQNKRTPTFLQFIKAETG 452
Query: 456 VLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 491
+L+ T+VAARGLD + +V YD P DY+HR+
Sbjct: 453 ILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRV 488
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 183 bits (464), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 190/386 (49%), Gaps = 18/386 (4%)
Query: 110 SHPNGTHATGNVSSVKDQGASD--AGAGLSPESYRRRHE-ITVSGDNVPPPFTSFGSTGL 166
S+ + T ++ D D A L P R + E +T + N F L
Sbjct: 108 SYIDEVEKTVQSEAISDSNNEDWKATLKLPPRDNRYQTEDVTATKGN------EFEDYFL 161
Query: 167 PPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGN 226
++L+ + GF P+PIQ +S PIAL DI+A AK G+GKT + IP + N
Sbjct: 162 KRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENN 221
Query: 227 NSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERGADIVV 286
+ ++L PTRELA Q + K +I + GG + + + ++V
Sbjct: 222 VIQ----AVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHLLV 277
Query: 287 ATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATW 346
TPGR+ D+ + L + LV+DEAD++L + F+P I +++ +P RQ LM++AT+
Sbjct: 278 GTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILMFSATF 337
Query: 347 PKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGSK 406
P V+ L P +N+ +D+L +TQ+ + K L + S+ Q ++
Sbjct: 338 PVTVKSFKDRYLKKPYIINL--MDQLTL-MGVTQYYAFVEERQKVHCLNTLF-SKLQINQ 393
Query: 407 IIIFCSTKKMCDQLARNLTRQ-FGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAAR 465
IIFC++ + LA+ +T + IH Q R+ V FR G LV TD+ R
Sbjct: 394 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTR 453
Query: 466 GLDIKDIRVVVNYDFPTGVEDYVHRI 491
G+DI+ + VV+N+DFP E Y+HR+
Sbjct: 454 GIDIQAVNVVINFDFPRTSESYLHRV 479
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 193/388 (49%), Gaps = 24/388 (6%)
Query: 159 TSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAF 218
T+F GL ++ + G PTP+Q P L RD++ +A+TGSGKT + +P
Sbjct: 58 TNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPIL 117
Query: 219 FHLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDI 278
L G LV++PTRELA Q+ ++ G + C + GG Q +
Sbjct: 118 HRLA----EDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSL 173
Query: 279 ERGADIVVATPGRLNDILEMRRIS---LHQISYLVLDEADRMLDMGFEPQIRKIVNEVPA 335
IV+ TPGR+ +LE + +LVLDEADR+LD+GF+ ++R I +P
Sbjct: 174 VSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPK 233
Query: 336 RRQTLMYTATWPKEVRKI----AADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKH 391
RQTL+++AT ++ + + + VD ++TQ K
Sbjct: 234 SRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVD------TLTQQFIFEDKDAKE 287
Query: 392 RRLEQIL-RSQDQGSK-IIIFCSTKKMCDQLARNLTR-QFGAAAIHGDKSQAERDHVLSQ 448
L IL + +D+G + +IF ST + C +L+ L + A+H SQ+ R LS+
Sbjct: 288 LYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSK 347
Query: 449 FRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFA 508
F++G+ P+L+ATDVA+RGLDI + +V+NYD P DYVHR+ LA +
Sbjct: 348 FKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIIT 407
Query: 509 EQDAKYA----SDLIKVLEGANQRVPSE 532
E D K ++ K +E N++V ++
Sbjct: 408 ETDVKLIHKIEEEVGKKMEPYNKKVITD 435
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 173/332 (52%), Gaps = 9/332 (2%)
Query: 161 FGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFH 220
F L ++LK + GF P+PIQ +S PIAL DI+A AK G+GKT + IP
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVL-- 183
Query: 221 LKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIER 280
K NN+ + +LV PTRELA Q + K I + GG + + +
Sbjct: 184 EKIDPNNNVIQAMILV--PTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQ 241
Query: 281 GADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTL 340
++V TPGR+ D+ + L + LV+DEAD++L F+P + +++ +P RQ L
Sbjct: 242 PVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFL 301
Query: 341 MYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRS 400
M++AT+P V+ L P +N+ +D+L +TQ+ + K L + S
Sbjct: 302 MFSATFPVTVKAFKDRHLRKPYVINL--MDQLTL-MGVTQYYAFVEERQKVHCLNTLF-S 357
Query: 401 QDQGSKIIIFCSTKKMCDQLARNLTRQ-FGAAAIHGDKSQAERDHVLSQFRTGRSPVLVA 459
+ Q ++ IIFC++ + LA+ +T + IH Q R+ V +FR G LV
Sbjct: 358 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVC 417
Query: 460 TDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 491
TD+ RG+DI+ + VV+N+DFP E Y+HR+
Sbjct: 418 TDLFTRGIDIQAVNVVINFDFPRTSESYLHRV 449
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 173/332 (52%), Gaps = 9/332 (2%)
Query: 161 FGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFH 220
F L ++LK + GF P+PIQ +S PIAL DI+A AK G+GKT + IP
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVL-- 183
Query: 221 LKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIER 280
K NN+ + +LV PTRELA Q + K I + GG + + +
Sbjct: 184 EKIDPNNNVIQAMILV--PTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQ 241
Query: 281 GADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTL 340
++V TPGR+ D+ + L + LV+DEAD++L F+P + +++ +P RQ L
Sbjct: 242 PVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFL 301
Query: 341 MYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRS 400
M++AT+P V+ L P +N+ +D+L +TQ+ + K L + S
Sbjct: 302 MFSATFPVTVKAFKDRHLRKPYVINL--MDQLTL-MGVTQYYAFVEERQKVHCLNTLF-S 357
Query: 401 QDQGSKIIIFCSTKKMCDQLARNLTRQ-FGAAAIHGDKSQAERDHVLSQFRTGRSPVLVA 459
+ Q ++ IIFC++ + LA+ +T + IH Q R+ V +FR G LV
Sbjct: 358 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVC 417
Query: 460 TDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 491
TD+ RG+DI+ + VV+N+DFP E Y+HR+
Sbjct: 418 TDLFTRGIDIQAVNVVINFDFPRTSESYLHRV 449
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 184/353 (52%), Gaps = 26/353 (7%)
Query: 159 TSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAF 218
T F L P LK +++AGF T +Q + P+ LQ +DI+A AKTG+GKT+ +L+P+
Sbjct: 80 TRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSI 139
Query: 219 FHLKR----TGNNSKMGPTVLVLSPTRELATQIQDEA-VKFGKSSRISCVCLYGGAPKGP 273
+ + + +N VLV+ PTRELA Q EA + I + GG
Sbjct: 140 EAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTKLPT 199
Query: 274 QLRDIERG-ADIVVATPGRLNDILEMRR---ISLHQISYLVLDEADRMLDMGFEPQIRKI 329
+ R +++ I+VATPGRL D ++ L + LVLDEAD +LDMGF +I +I
Sbjct: 200 EQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERI 259
Query: 330 VNEVPARRQTLMYTATWPKEVRKIAADLL------VNPVQVNIG----NVDELVANKSIT 379
+ VP +RQT +++AT EVR+I L VN VQ G V ++ S+
Sbjct: 260 IAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMYMIASLD 319
Query: 380 QHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTR-QFGAAAIHGDKS 438
+H +L K + + G K+IIFC+T + +A L + IH K
Sbjct: 320 RHFSLLYGLLKKHITDNV------GYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKP 373
Query: 439 QAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 491
Q+ R V +FR +S +LV +DV+ARG+D D+ +VV P+ E Y+HR+
Sbjct: 374 QSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRL 426
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 190/349 (54%), Gaps = 18/349 (5%)
Query: 159 TSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAF 218
T F L P LK +++AG+ T +Q + PI L+ +D++A AKTG+GKT+ +L+P+
Sbjct: 320 TRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSI 379
Query: 219 FHLKR---TGNNSKMGPTV-LVLSPTRELATQIQDEAVKFGKSS-RISCVCLYGGAPKGP 273
+ + T ++K P + LV+ PTRELA Q EA K I + GG G
Sbjct: 380 EVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGL 439
Query: 274 QLRDIERG-ADIVVATPGRLNDILEMR---RISLHQISYLVLDEADRMLDMGFEPQIRKI 329
+ + ++ I+VATPGRL D +E L + LVLDEAD +LDMGF I +I
Sbjct: 440 EQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERI 499
Query: 330 VNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQ-VNIGNVDELVANKSITQHIEVLPPT 388
++ VP RQT +++AT P+EVR+I L + VN + + ++ + Q + ++
Sbjct: 500 ISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQ-MHMIASL 558
Query: 389 DKH-RRLEQILRSQDQGS---KIIIFCSTKKMCDQLARNLTRQFGAAA--IHGDKSQAER 442
D+H L +LR G+ K+I+FC+T M +L +L + IH K Q+ R
Sbjct: 559 DRHFSLLYTLLREHIMGNVDYKVIVFCTT-AMVTKLVADLLGELNLNVREIHSRKPQSYR 617
Query: 443 DHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 491
V ++FR + +LV +DV+ARG+D D+ +V+ P E Y+HR+
Sbjct: 618 TRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRL 666
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 192/381 (50%), Gaps = 13/381 (3%)
Query: 160 SFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFF 219
SF + L P++L+ + GF P+ IQ + + D++ A++G+GKT +
Sbjct: 42 SFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQ 101
Query: 220 HLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIE 279
L + S + LVL+PTRELA QI+ G + GG R ++
Sbjct: 102 QL----DISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQ 157
Query: 280 RGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQT 339
G +VV TPGR+ D+L + + I VLDEAD ML GF+ QI I +P++ Q
Sbjct: 158 SGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQV 217
Query: 340 LMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHR-RLEQI- 397
+++AT P E +I + PV++ + DEL ++ V DK +LE +
Sbjct: 218 GVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNV----DKEEWKLETLC 272
Query: 398 -LRSQDQGSKIIIFCSTKKMCDQLARNL-TRQFGAAAIHGDKSQAERDHVLSQFRTGRSP 455
L ++ +IF +T++ D L + +R +A HGD Q RD ++ +FR+G S
Sbjct: 273 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 332
Query: 456 VLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYA 515
VL+ TD+ ARG+D++ + +V+N+D PT E+Y+HRI +A F +D +
Sbjct: 333 VLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMM 392
Query: 516 SDLIKVLEGANQRVPSELRDM 536
+D+ + + +PS + D+
Sbjct: 393 ADIQRFYNVVVEELPSNVADL 413
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 176 bits (446), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 185/348 (53%), Gaps = 6/348 (1%)
Query: 147 ITVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTG 206
I + G + T F S L + ++ GF T IQA S L+ +D++ A+TG
Sbjct: 78 IVIVGKGIMTNVT-FDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTG 136
Query: 207 SGKTLGYLIPAFFHLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLY 266
SGKTL +LIPA L + + + G V+V+ PTRELA Q ++ A + K + +
Sbjct: 137 SGKTLAFLIPAVELLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVI 196
Query: 267 GGAPKGPQLRDIERGADIVVATPGRLNDILEMRRISLHQ-ISYLVLDEADRMLDMGFEPQ 325
GG + + + I G+++V+ATPGRL D L+ + +++ + LV+DEADR+L+ FE
Sbjct: 197 GGNNRRSEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEED 256
Query: 326 IRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVL 385
+ KI+ +P RQT +++AT +V+ +A L +PV V++ + V N+ + Q V+
Sbjct: 257 MNKILKILPKTRQTALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVV 316
Query: 386 PPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTR--QFGAAAIHGDKSQAERD 443
P + L L+ ++ KI++F ST K Q + + + IHG Q R
Sbjct: 317 PSKQRLILLISFLK-KNLNKKIMVFFSTCKSV-QFHTEIMKISDVDVSDIHGGMDQNRRT 374
Query: 444 HVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 491
F + +L+ TDVAARGLDI + ++ YD P +Y+HR+
Sbjct: 375 KTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRV 422
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 186/378 (49%), Gaps = 7/378 (1%)
Query: 160 SFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFF 219
SF + GL +L+ + GF P+ IQ + + D++ A++G+GKT +
Sbjct: 40 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 99
Query: 220 HLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIE 279
L + S + LVL+PTRELA QI+ G + GG R ++
Sbjct: 100 QL----DFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 155
Query: 280 RGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQT 339
G +VV TPGR+ D+L+ + + I VLDEAD ML GF+ QI I +P + Q
Sbjct: 156 AGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
Query: 340 LMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILR 399
+++AT P E +I + PV++ + DEL ++ V K L +
Sbjct: 216 GVFSATMPPEALEITRKFMSKPVRILVKR-DELTLEGIKQFYVNVEKEEWKLETLCDLYE 274
Query: 400 SQDQGSKIIIFCSTKKMCDQLARNL-TRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLV 458
+ ++ +IF +T++ D L + +R +A HGD Q RD ++ +FR+G S VL+
Sbjct: 275 TL-AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
Query: 459 ATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDL 518
TD+ ARG+D++ + +V+N+D PT E+Y+HRI +A F D + D+
Sbjct: 334 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 393
Query: 519 IKVLEGANQRVPSELRDM 536
K + +PS + D+
Sbjct: 394 QKFYNVVVEELPSNVADL 411
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 188/380 (49%), Gaps = 11/380 (2%)
Query: 160 SFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFF 219
SF + GL +L+ + GF P+ IQ + + D++ A++G+GKT +
Sbjct: 30 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 89
Query: 220 HLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIE 279
L + S + LVL+PTRELA QI+ G + GG R ++
Sbjct: 90 QL----DFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 145
Query: 280 RGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQT 339
G +VV TPGR+ D+L+ + + I VLDEAD ML GF+ QI I +P + Q
Sbjct: 146 AGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 205
Query: 340 LMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQI-- 397
+++AT P E +I + PV++ + DEL ++ V + +LE +
Sbjct: 206 GVFSATMPPEALEITRKFMSKPVRILVKR-DELTLEGIKQFYVNV---EKEEWKLETLCD 261
Query: 398 LRSQDQGSKIIIFCSTKKMCDQLARNL-TRQFGAAAIHGDKSQAERDHVLSQFRTGRSPV 456
L ++ +IF +T++ D L + +R +A HGD Q RD ++ +FR+G S V
Sbjct: 262 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 321
Query: 457 LVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYAS 516
L+ TD+ ARG+D++ + +V+N+D PT E+Y+HRI +A F D +
Sbjct: 322 LITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 381
Query: 517 DLIKVLEGANQRVPSELRDM 536
D+ K + +PS + D+
Sbjct: 382 DIQKFYNVVVEELPSNVADL 401
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/413 (30%), Positives = 207/413 (50%), Gaps = 34/413 (8%)
Query: 150 SGDNVPPPFTSFGSTGLPP----EILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKT 205
S N+ T + L P +I++ + + F TP+QA + P+ +D+ A T
Sbjct: 3 SSANINKALTETRFSDLEPPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAAT 62
Query: 206 GSGKTLGYLIPAFFHLKRTGN-----NSKMGPTVLVLSPTRELATQIQDEAVKFGKS-SR 259
GSGKTL +++P L+R+ + + MG +++SPTREL+TQI + A F + +
Sbjct: 63 GSGKTLAFVVPLVEILRRSTSFPPKPHQVMG---VIISPTRELSTQIYNVAQPFVSTLAN 119
Query: 260 ISCVCLYGGAPKGPQLRDIER-GADIVVATPGRLNDILE-MRRISLHQISYLVLDEADRM 317
++ V L GG ++ IE G ++++ TPGRL+DI+E M + + L+LDEADR+
Sbjct: 120 VNSVLLVGGREVKADMKIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRL 179
Query: 318 LDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKS 377
L+MGF+ Q+ I++ +P +R+T +++AT + V ++A L NPV+V + + +++
Sbjct: 180 LEMGFQRQVNYIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQ 239
Query: 378 ITQ-------HIEVLP-PTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLT---- 425
+T H+E + DK L ++ K+I+F T D L+
Sbjct: 240 LTNSKTPSGLHLEYMECEADKKSSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPA 299
Query: 426 -RQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGV 484
+ IHGD Q RD L+ F S L+ TDVAARGLDI I VV YD P
Sbjct: 300 LKSISLIPIHGDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDP 359
Query: 485 EDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSELRDMS 537
+ HR A F ++ Y + +++ +RVP E R S
Sbjct: 360 NMFNHRAGRTARLGRQGRAIVFLLPKEEAYV-EFMRI-----RRVPLEERKCS 406
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 204/397 (51%), Gaps = 21/397 (5%)
Query: 149 VSGDNVPPPFTSFGSTG-----LPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIA 203
V+G+ V + S+G L PE+L+ + ++GF P+ +Q + P A+ D++ A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 204 KTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCV 263
K+G GKT +++ ++ + + LVL TRELA QI +E V+F + V
Sbjct: 91 KSGMGKTAVFVLSTLQQIEPSPGQV----SALVLCHTRELAYQICNEFVRFSTYLPDTKV 146
Query: 264 CLYGGAPKGPQLRDIERGA--DIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLD-M 320
++ G +D+ + IVV TPGR+ + + +SL + + +LDE D+ML+ +
Sbjct: 147 SVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESL 206
Query: 321 GFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQ 380
+++I P +Q +M++AT KE+R + + +P+++ + + +L + + Q
Sbjct: 207 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH-GLVQ 265
Query: 381 HIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTR-QFGAAAIHGDKSQ 439
H L +K+R+L +L + D ++++IF + +L + L F + IH SQ
Sbjct: 266 HYIKLSEMEKNRKLNDLLDALD-FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 324
Query: 440 AERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXX 499
ER F+ G +LVATD+ RG+DI+ + +V+NYD P + Y+HR+
Sbjct: 325 EERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 384
Query: 500 XXLAYTFFAEQDAKYASDLIKVLEGANQRVPSELRDM 536
LA TF A ASD +VL +R +++++
Sbjct: 385 KGLAITFVAS-----ASD-SEVLNQVQERFEVDIKEL 415
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 204/397 (51%), Gaps = 21/397 (5%)
Query: 149 VSGDNVPPPFTSFGSTG-----LPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIA 203
V+G+ V + S+G L PE+L+ + ++GF P+ +Q + P A+ D++ A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 204 KTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCV 263
K+G GKT +++ ++ + + LVL TRELA QI +E V+F + V
Sbjct: 91 KSGMGKTAVFVLSTLQQIEPSPGQV----SALVLCHTRELAYQICNEFVRFSTYLPDTKV 146
Query: 264 CLYGGAPKGPQLRDIERGA--DIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLD-M 320
++ G +D+ + IVV TPGR+ + + +SL + + +LDE D+ML+ +
Sbjct: 147 SVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESL 206
Query: 321 GFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQ 380
+++I P +Q +M++AT KE+R + + +P+++ + + +L + + Q
Sbjct: 207 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH-GLVQ 265
Query: 381 HIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTR-QFGAAAIHGDKSQ 439
H L +K+R+L +L + D ++++IF + +L + L F + IH SQ
Sbjct: 266 HYIKLSEMEKNRKLNDLLDALD-FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 324
Query: 440 AERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXX 499
ER F+ G +LVATD+ RG+DI+ + +V+NYD P + Y+HR+
Sbjct: 325 EERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 384
Query: 500 XXLAYTFFAEQDAKYASDLIKVLEGANQRVPSELRDM 536
LA TF A ASD +VL +R +++++
Sbjct: 385 KGLAITFVAS-----ASD-SEVLNQVQERFEVDIKEL 415
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 197/384 (51%), Gaps = 21/384 (5%)
Query: 166 LPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTG 225
L +I++ + +GF TP+QA++ P +D+V A TGSGKTL +L+P F + R
Sbjct: 23 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLP-FIEIIRRS 81
Query: 226 NNSKMGP---TVLVLSPTRELATQIQDEAVKFGKS-SRISCVCLYGGAPKGPQLRDIER- 280
N+ P +++SPTREL+ QI A F + ++ V L GG + +E
Sbjct: 82 NSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEE 141
Query: 281 GADIVVATPGRLNDILE-MRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQT 339
GA++++ TPGRL+D+++ M + + L+LDEADR+LDMGF+ Q+ I++ +P +R+T
Sbjct: 142 GANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRT 201
Query: 340 LMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQI-L 398
+++AT + V +A L N ++V G E + S + E L + + + L
Sbjct: 202 GLFSATQTQAVADLAKAGLRNAMEVISGA--ESKSKTSSGLYCEYLKCEADQKSSQLVHL 259
Query: 399 RSQDQGSKIIIFCSTKKMCDQLARNLTR-----QFGAAAIHGDKSQAERDHVLSQFRTGR 453
+++ K+++F T D L++ + HG Q RD L+ F
Sbjct: 260 LIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTEAS 319
Query: 454 SPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAK 513
S VL+ TDVAARGLDI I VV YD P + ++HR+ A F ++
Sbjct: 320 SGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVFLMPKETD 379
Query: 514 YASDLIKVLEGANQRVPSELRDMS 537
Y + +++ +RVP + R S
Sbjct: 380 YV-EFMRI-----RRVPLQERKCS 397
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 185/378 (48%), Gaps = 7/378 (1%)
Query: 160 SFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFF 219
SF + GL +L+ + GF P+ IQ + + D++ A++G+GKT +
Sbjct: 40 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 99
Query: 220 HLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIE 279
L + + + LVL+PTRELA QI+ G + GG R ++
Sbjct: 100 QL----DYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQ 155
Query: 280 RGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQT 339
G +VV TPGR+ D+L + + I VLDEAD ML GF+ QI I +P + Q
Sbjct: 156 AGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
Query: 340 LMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILR 399
+++AT P E +I + PV++ + DEL ++ V K L +
Sbjct: 216 GVFSATMPPEALEITRKFMSKPVRILVKR-DELTLEGIKQFYVNVEKEDWKLETLCDLYE 274
Query: 400 SQDQGSKIIIFCSTKKMCDQLARNL-TRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLV 458
+ ++ +IF +T++ D L + +R +A HGD Q RD ++ +FR+G S VL+
Sbjct: 275 TL-AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
Query: 459 ATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDL 518
TD+ ARG+D++ + +V+N+D PT E+Y+HRI +A F D + D+
Sbjct: 334 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDI 393
Query: 519 IKVLEGANQRVPSELRDM 536
K + +PS + D+
Sbjct: 394 QKFYNVVVEELPSNVADL 411
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 185/378 (48%), Gaps = 12/378 (3%)
Query: 160 SFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFF 219
SF + GL +L+ GF P+ IQ + + D++ A++G+GKT +
Sbjct: 40 SFDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 94
Query: 220 HLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIE 279
L + S + LVL+PTRELA QI+ G + GG R ++
Sbjct: 95 QL----DFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 150
Query: 280 RGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQT 339
G +VV TPGR+ D+L+ + + I VLDEAD ML GF+ QI I +P + Q
Sbjct: 151 AGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 210
Query: 340 LMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILR 399
+++AT P E +I + PV++ + DEL ++ V K L +
Sbjct: 211 GVFSATMPPEALEITRKFMSKPVRILVKR-DELTLEGIKQFYVNVEKEEWKLETLCDLYE 269
Query: 400 SQDQGSKIIIFCSTKKMCDQLARNL-TRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLV 458
+ ++ +IF +T++ D L + +R +A HGD Q RD ++ +FR+G S VL+
Sbjct: 270 TL-AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 328
Query: 459 ATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDL 518
TD+ ARG+D++ + +V+N+D PT E+Y+HRI +A F D + D+
Sbjct: 329 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 388
Query: 519 IKVLEGANQRVPSELRDM 536
K + +PS + D+
Sbjct: 389 QKFYNVVVEELPSNVADL 406
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 176/355 (49%), Gaps = 7/355 (1%)
Query: 160 SFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFF 219
SF + GL +L+ + GF P+ IQ + + D++ A++G+GKT +
Sbjct: 40 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 99
Query: 220 HLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIE 279
L + S + LVL+PTRELA QI+ G + GG R ++
Sbjct: 100 QL----DFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 155
Query: 280 RGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQT 339
G +VV TPGR+ D+L+ + + I VLDEAD ML GF+ QI I +P + Q
Sbjct: 156 AGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
Query: 340 LMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILR 399
+++AT P E +I + PV++ + DEL ++ V K L +
Sbjct: 216 GVFSATMPPEALEITRKFMSKPVRILVKR-DELTLEGIKQFYVNVEKEEWKLETLCDLYE 274
Query: 400 SQDQGSKIIIFCSTKKMCDQLARNL-TRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLV 458
+ ++ +IF +T++ D L + +R +A HGD Q RD ++ +FR+G S VL+
Sbjct: 275 TL-AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
Query: 459 ATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAK 513
TD+ ARG+D++ + +V+N+D PT E+Y+HRI +A F D +
Sbjct: 334 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 388
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 184/378 (48%), Gaps = 12/378 (3%)
Query: 160 SFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFF 219
SF + GL +L+ GF P+ IQ + + D++ A++G+GKT +
Sbjct: 40 SFDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 94
Query: 220 HLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIE 279
L + + + LVL+PTRELA QI+ G + GG R ++
Sbjct: 95 QL----DYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQ 150
Query: 280 RGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQT 339
G +VV TPGR+ D+L + + I VLDEAD ML GF+ QI I +P + Q
Sbjct: 151 AGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 210
Query: 340 LMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILR 399
+++AT P E +I + PV++ + DEL ++ V K L +
Sbjct: 211 GVFSATMPPEALEITRKFMSKPVRILVKR-DELTLEGIKQFYVNVEKEDWKLETLCDLYE 269
Query: 400 SQDQGSKIIIFCSTKKMCDQLARNL-TRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLV 458
+ ++ +IF +T++ D L + +R +A HGD Q RD ++ +FR+G S VL+
Sbjct: 270 TL-AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 328
Query: 459 ATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDL 518
TD+ ARG+D++ + +V+N+D PT E+Y+HRI +A F D + D+
Sbjct: 329 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDI 388
Query: 519 IKVLEGANQRVPSELRDM 536
K + +PS + D+
Sbjct: 389 QKFYNVVVEELPSNVADL 406
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 173/348 (49%), Gaps = 19/348 (5%)
Query: 160 SFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFF 219
+F GL E++ +Q PT IQ P ++ + +V + TGSGKTL YL+P
Sbjct: 113 NFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQ 172
Query: 220 HLKR----TGNNSK-MGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQ 274
++ G +K P +VL PTREL+ Q+ A +R + + GG+ PQ
Sbjct: 173 LMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIRPQ 232
Query: 275 LRDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVP 334
+ D+VV TPGR+ +E + I+YLVLDEAD M D GF P+IRK + +
Sbjct: 233 EDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLN 292
Query: 335 ARR--------QTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLP 386
R QT++ TAT V+K+ + + + + +AN + I++
Sbjct: 293 QRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIAN-ARHDFIKLSG 351
Query: 387 PTDKHRRLEQILR-SQDQGSKIIIFCSTKKMCDQLARNLTR-QFGAAAIHGDKSQAERDH 444
DK L Q+L S +GSK+++FC+T + L+ Q HG+ +R
Sbjct: 352 GEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVE 411
Query: 445 VLSQFR--TGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHR 490
L +F+ G P LV TD+AARGLD+ D+ VV +DFP DY+HR
Sbjct: 412 NLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLHR 458
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 183/367 (49%), Gaps = 13/367 (3%)
Query: 174 VQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPT 233
+++A + T +Q+ + P AL RDI+ A+TGSGKTL ++IP L R + + G
Sbjct: 86 LKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLHRERWSPEDGVG 145
Query: 234 VLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERGADIVVATPGR-L 292
+++SPTRELA Q K GK + S L GG ++ +I+V PGR L
Sbjct: 146 CIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVHEMNILVCAPGRLL 205
Query: 293 NDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRK 352
+ E Q+ L+LDEADR+LD F+ Q+ I++++P RQTL+++AT K+V+
Sbjct: 206 QHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQTLLFSATQTKKVKD 265
Query: 353 IAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCS 412
+A L +P +++ S+ Q + ++P K L +++ S+I++F S
Sbjct: 266 LARLSLRDPEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWSFIKTH-LNSRILVFLS 324
Query: 413 TKKMCDQLARNLTRQ---FGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDI 469
TKK + + ++HG SQ +R V SQF R VL TDV ARGLD
Sbjct: 325 TKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQF-IERQSVLFCTDVLARGLDF 383
Query: 470 -KDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDL------IKVL 522
K + VV D P V Y+HR+ + F + K L IK++
Sbjct: 384 DKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPSEEKMIEKLQEAKVPIKLI 443
Query: 523 EGANQRV 529
+ NQ++
Sbjct: 444 KANNQKL 450
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 159 bits (402), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 179/355 (50%), Gaps = 33/355 (9%)
Query: 161 FGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFH 220
F + + P LK + +G T +Q + L +D + AKTG+GK++ +L+PA
Sbjct: 330 FDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 389
Query: 221 LKRTGNN----SKMGPT-VLVLSPTRELATQIQDEA---VKFGKSSRISCVCLYGGAP-K 271
+ + N+ +K+ P L+L PTRELA+QI E +KF I L GG K
Sbjct: 390 VLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDG--IGVQTLIGGTRFK 447
Query: 272 GPQLRDIERGADIVVATPGRLNDILEMRR---ISLHQISYLVLDEADRMLDMGFEPQIRK 328
Q R I++ATPGRL D +E + L + ++DEAD +LD+GF + K
Sbjct: 448 LDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEK 507
Query: 329 IVNEVPARRQTLMYTATWPKEVRKIAADLL------VNPVQVNIGNVDELVANKSIT--- 379
I++ +P +RQ+L+++AT PKEVR+++ +L ++ + + + V I
Sbjct: 508 IIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCIVAPH 567
Query: 380 -QHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ--FGAAAIHGD 436
H ++P H E I + D KII+FCST M L L R+ IH
Sbjct: 568 ESHFHLVP----HLLKEHINNTPDY--KIIVFCST-GMVTSLMYTLLREMKLNVREIHAR 620
Query: 437 KSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 491
K Q R V +F+ +LV +DV+ARG++ D+ +V+ P+ E Y+HR+
Sbjct: 621 KPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRL 675
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 178/353 (50%), Gaps = 29/353 (8%)
Query: 161 FGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFH 220
F + + P LK + +G T +Q + L +D + AKTG+GK++ +L+PA
Sbjct: 377 FDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 436
Query: 221 LKRTGNNSK----MGPT-VLVLSPTRELATQIQDEAVKFGKSSR-ISCVCLYGGAP-KGP 273
+ + N+ K + P VL+L PTRELA+QI E K+ I L GG +
Sbjct: 437 VLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLD 496
Query: 274 QLRDIERGADIVVATPGRLNDILEMRR---ISLHQISYLVLDEADRMLDMGFEPQIRKIV 330
Q R I++ATPGRL D +E + L + ++DEAD +LD+GF+ + KI+
Sbjct: 497 QQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEKII 556
Query: 331 NEVPARRQTLMYTATWPKEVRKIAADLL------VNPVQVNIGNVDELVANKSIT----Q 380
+ +P +RQ+L+++AT PKEVR+++ +L ++ + + + V I
Sbjct: 557 DCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCIVAPHES 616
Query: 381 HIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ--FGAAAIHGDKS 438
H ++P H E I D KII+FCST M L L R+ IH K
Sbjct: 617 HFHLVP----HLLKEHINNMPDY--KIIVFCST-GMVTSLMYTLLREMKLNVREIHARKP 669
Query: 439 QAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 491
Q R V +F+ +LV +DV+ARG++ D+ +V+ P+ E Y+HR+
Sbjct: 670 QLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRL 722
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 205/438 (46%), Gaps = 62/438 (14%)
Query: 149 VSGDNVPPPFTSFGSTG-----LPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIA 203
V+G+ V + S+G L PE+L+ + ++GF P+ +Q + P A+ D++ A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 204 KTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCV 263
K+G GKT +++ ++ + + LVL TRELA QI +E V+F + V
Sbjct: 91 KSGMGKTAVFVLSTLQQIEPSPGQV----SALVLCHTRELAYQICNEFVRFSTYLPDTKV 146
Query: 264 CLYGGAPKGPQLRDIERGA--DIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLD-M 320
++ G +D+ + IVV TPGR+ + + +SL + + +LDE D+ML+ +
Sbjct: 147 SVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESL 206
Query: 321 GFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLL---------------------- 358
+++I P +Q +M++AT KE+R + +
Sbjct: 207 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSG 266
Query: 359 -------------------VNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILR 399
++P+++ + + +L + + QH L +K+R+L +L
Sbjct: 267 YCVFPRFHRARMGLNVPSNIDPMEIYVDDEAKLTLH-GLVQHYIKLSEMEKNRKLNDLLD 325
Query: 400 SQDQGSKIIIFCSTKKMCDQLARNLTR-QFGAAAIHGDKSQAERDHVLSQFRTGRSPVLV 458
+ D ++++IF + +L + L F + IH SQ ER F+ G +LV
Sbjct: 326 ALD-FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILV 384
Query: 459 ATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDL 518
ATD+ RG+DI+ + +V+NYD P + Y+HR+ LA TF A ASD
Sbjct: 385 ATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVAS-----ASD- 438
Query: 519 IKVLEGANQRVPSELRDM 536
+VL +R +++++
Sbjct: 439 SEVLNQVQERFEVDIKEL 456
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 177/392 (45%), Gaps = 55/392 (14%)
Query: 154 VPPPFT--SFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTL 211
V P F+ SF GLP +L ++ GFS PT +Q+ + P ++ D V + TGSGKTL
Sbjct: 103 VSPLFSAKSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTL 162
Query: 212 GYLIPAFFHL---------KRTGNNSKMGPTVLVLSPTRELATQIQDEAVKF-GKSSRIS 261
YL+P + + N+ + ++++P+REL QI E K G R
Sbjct: 163 AYLLPILSEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRM 222
Query: 262 CVCLYGGAPKGPQLRDIERGA-DIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDM 320
L GGA + Q +++ IVV TPGR+ +I + ++ H +LVLDE D +L
Sbjct: 223 VQQLVGGANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSF 282
Query: 321 GFEPQIRKIVNEVPAR--------------RQTLMYTATWPKEVRKIAADLLVNPVQVNI 366
F I +I+ V R RQT++ +AT P V + A PV V
Sbjct: 283 NFREDIHRILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQA 342
Query: 367 GNVDEL-----------------VANKSITQHIEVLPPTDKHR-----------RLEQIL 398
V L A+ I I+ LPP KH L + +
Sbjct: 343 NKVTPLDTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCV 402
Query: 399 RSQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLV 458
+ D S I ++++ D + + R +A +HGD + R VL +F+ G VLV
Sbjct: 403 HALDAQSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLV 462
Query: 459 ATDVAARGLDIKDIRVVVNYDFPTGVEDYVHR 490
+++ARGLD+ + +VVN + PT Y HR
Sbjct: 463 TNELSARGLDVAECDLVVNLELPTDAVHYAHR 494
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 149 bits (376), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 201/442 (45%), Gaps = 84/442 (19%)
Query: 159 TSFGSTGLPPEILKEV-QNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPA 217
SF S GL ++ ++ + GF APT +QAQ+ P+ L RD++ A TG+GKT+ YL P
Sbjct: 29 CSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPL 88
Query: 218 FFHLKRTGNNSKM----GPTVLVLSPTRELATQIQDEAVKFGKSSRISCVC---LYGGAP 270
HL+ G++ K+ G LV+ PTREL Q+ + K R + + GG
Sbjct: 89 IHHLQ--GHSPKVDRSHGTFALVIVPTRELCLQVYETLEKL--LHRFHWIVPGYVMGGEK 144
Query: 271 KGPQLRDIERGADIVVATPGRLNDILEMRRISLHQ-ISYLVLDEADRMLDMGFEPQIRKI 329
K + + +G I++ATPGRL D L+ +H+ + +++ DEAD +L++G+ +I +I
Sbjct: 145 KAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQI 204
Query: 330 V-------NE-------VPA--RRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNV---- 369
+ NE VP ++Q L+ +AT +V +A L +PV + + N
Sbjct: 205 IKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLDNTKLQQ 264
Query: 370 --------------DELV--ANKS-------------ITQHIEVLPPTDKHRRLEQILRS 400
+++V NKS + Q +P + L +L++
Sbjct: 265 NLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVLKN 324
Query: 401 ---QDQGSKIIIFCSTKKMCD-------------------QLARNLTRQFGAAAIHGDKS 438
++ K+++F ST+ D + + L + +HG
Sbjct: 325 LFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGSME 384
Query: 439 QAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXX 498
Q +R F+T + VL++TDVAARGLD +R ++ YD P +YVHR+
Sbjct: 385 QEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARIG 444
Query: 499 XXXLAYTFFAEQDAKYASDLIK 520
A F + Y +L K
Sbjct: 445 EKGEALLFLQPIEIDYLKELKK 466
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 175/380 (46%), Gaps = 50/380 (13%)
Query: 160 SFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFF 219
SF GL +++ + G PT IQ + P L+ +D+VA AKTGSGKTL YL+P
Sbjct: 47 SFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQ 106
Query: 220 HLKRTGNNS--KMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCL-YGGAPKGPQLR 276
L + S K+ P+ +L P+REL Q+ E + R+ + + +R
Sbjct: 107 KLFSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDMR 166
Query: 277 DIERGA-DIVVATPGRL-----NDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIV 330
+ G +I+V+TP + +LE +S +S LVLDEAD +L G+E +R +
Sbjct: 167 NALAGLPEILVSTPACIPKCFAAGVLEPTAVS-ESLSILVLDEADLLLSYGYEDNLRSVT 225
Query: 331 NEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNI--GNVDELVANKSITQHIEVLPPT 388
+ +P R Q L+ +AT +V K+ +L NP+ + + N E ++ Q
Sbjct: 226 SIIPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCSAQ 285
Query: 389 DKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTRQFG--AAAIHGDKSQAERDHVL 446
DK + +L+ + KI+IF +T M +L L + FG +A ++G+ Q R H+L
Sbjct: 286 DKLLHILALLKLEVVQKKILIFINTIDMGFRLKLFLEK-FGIKSAILNGELPQNSRLHIL 344
Query: 447 SQFRTGRSPVLVATDV-----------------------------------AARGLDIKD 471
QF G L+ATD RG+D K
Sbjct: 345 EQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFKK 404
Query: 472 IRVVVNYDFPTGVEDYVHRI 491
+ V+N+D P V Y+HRI
Sbjct: 405 VHTVINFDMPQSVTGYIHRI 424
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 167/330 (50%), Gaps = 38/330 (11%)
Query: 152 DNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTL 211
+ PP F+ L +I++ + +GF TP+QA++ P +D+V A TGSGKTL
Sbjct: 11 EEAPPRFSELKPP-LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTL 69
Query: 212 GYLIPAFFHLKRTGNNSKMGP---TVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGG 268
+L+P F + R N+ P +++SPTREL+ QI K ++ R+
Sbjct: 70 AFLLP-FIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIH----KVARAVRLDFAKCREV 124
Query: 269 APKGPQLRDIERGADIVVATPGRLNDILE-MRRISLHQISYLVLDEADRMLDMGFEPQIR 327
L E GA++++ TPGRL+D+++ M + + L+LDEADR+LDMGF+ Q+
Sbjct: 125 EADMNTLE--EEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVN 182
Query: 328 KIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPP 387
I++ +P +R+T +++AT + V +A L NP + A++ +Q + +L
Sbjct: 183 YIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYL-------KCEADQKSSQLVHLL-- 233
Query: 388 TDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAI-----HGDKSQAER 442
+++ K+++F T D +++ +I HG Q R
Sbjct: 234 ------------IENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGR 281
Query: 443 DHVLSQFRTGRSPVLVATDVAARGLDIKDI 472
D L+ F S VL+ TDVAARGLDI I
Sbjct: 282 DTALASFTEASSGVLLCTDVAARGLDIPGI 311
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 176/343 (51%), Gaps = 16/343 (4%)
Query: 198 DIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKS 257
D++ AK+G GKT +++ ++ + + LVL TRELA QI +E V+F
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQIEPSPGQV----SALVLCHTRELAYQICNEFVRFSTY 57
Query: 258 SRISCVCLYGGAPKGPQLRDIERGA--DIVVATPGRLNDILEMRRISLHQISYLVLDEAD 315
+ V ++ G +D+ + IVV TPGR+ + + +SL + + +LDE D
Sbjct: 58 LPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECD 117
Query: 316 RMLD-MGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVA 374
+ML+ + +++I P +Q +M++AT KE+R + + +P+++ + + +L
Sbjct: 118 KMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTL 177
Query: 375 NKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTR-QFGAAAI 433
+ + QH L +K+R+L +L + D ++++IF + +L + L F + I
Sbjct: 178 H-GLVQHYIKLSEMEKNRKLNDLLDALD-FNQVVIFVKSVSRAAELNKLLVECNFPSICI 235
Query: 434 HGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXX 493
H SQ ER F+ G +LVATD+ RG+DI+ + +V+NYD P + Y+HR+
Sbjct: 236 HSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 295
Query: 494 XXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRVPSELRDM 536
LA TF A ASD +VL +R +++++
Sbjct: 296 AGRFGTKGLAITFVAS-----ASD-SEVLNQVQERFEVDIKEL 332
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 184/369 (49%), Gaps = 42/369 (11%)
Query: 150 SGDNVPPPFTS---FGSTGLPPEILKEVQ-NAGFSAPTPIQAQSWPIALQ--SRDIVAIA 203
SGD P+TS F L PE++K + F P+ IQA S P+ + + ++A A
Sbjct: 82 SGDT---PYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQA 138
Query: 204 KTGSGKTLGYLIPAFFHLKRTGNNSKMGPTV-----LVLSPTRELATQIQDEAVKFGKSS 258
GSGKT +++ G S++ PT+ L + PTRELA Q + K GK +
Sbjct: 139 HNGSGKTTCFVL---------GMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFT 189
Query: 259 RISCVCLYGGAPKGP--QLRDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADR 316
I+ + +G R A +V+ TPG L + +R+ L+ + LV DEAD
Sbjct: 190 GITAELAVPDSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADH 249
Query: 317 MLDM-GFEP---QIRKIVNEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDEL 372
ML GF +I K + V Q L+++AT+ + V+ A + +P Q+ + D
Sbjct: 250 MLATDGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFVKRED-- 307
Query: 373 VANKSITQHIEVLPPTDKHRRL--EQILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FG 429
+A S+ Q+ V P + +QI+ D G + IIF TK ++ + L +
Sbjct: 308 LALDSVKQYKVVCPKEQNKIEVIKDQIMELGDIG-QTIIFVKTKASAQKVHKALAEMGYD 366
Query: 430 AAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVED--- 486
++HG+ ++++RD ++ +F+ + VL+ATDV ARG D + + +VVNY+ PT E
Sbjct: 367 VTSVHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEP 426
Query: 487 ----YVHRI 491
Y+HR+
Sbjct: 427 DYEVYLHRV 435
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 171/359 (47%), Gaps = 28/359 (7%)
Query: 160 SFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFF 219
+F G +++K ++ F P IQA ++ + + + ++GSGKTL YL+P
Sbjct: 375 TFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQ 434
Query: 220 HLKRT-----GNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSR-ISCVCLYGGAPKGP 273
L+ +S P V+VL PT ELA+Q+ KS + + GG +
Sbjct: 435 RLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRT 494
Query: 274 QLRDIERGADIVVATPGRLNDILEMRRISLHQISYLVLDEADRML-DMGFEPQIRKIVNE 332
QL ++E+G D+++ATPGR ++ + L + +LDE D + D FE ++ ++N
Sbjct: 495 QLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLINS 554
Query: 333 VPARRQTLMYTATWPKEV-RKIA-----ADLLVNPVQVNIGN-VDELVANKSITQHIEVL 385
P Q L TAT P E+ K+ ++++ P + N ++E + + S + E
Sbjct: 555 SPVTAQYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDDNAEKT 614
Query: 386 PPT---DKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLT------RQFGAAAIHGD 436
P T +K L QI+ ++ SK IIFC+ + C ++ RQ H
Sbjct: 615 PETAFQNKKTALLQIM-EENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAA 673
Query: 437 KSQAERDHVLSQFRTGR----SPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 491
SQ R + +F + + S LV TD A+RG+D + VV +DFP +YV R+
Sbjct: 674 LSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRV 732
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 188/406 (46%), Gaps = 78/406 (19%)
Query: 158 FTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIA-LQSRDIVAIAKTGSGKTLGYLIP 216
F+++ S L P ++K + F PT IQ + +A Q +D++ A+TGSGKTL + +P
Sbjct: 189 FSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLP 248
Query: 217 AFFHLKRTGNNSKMGPT------------------VLVLSPTRELATQIQDEAVKFGKSS 258
L K+G L+++PTRELA Q+ + K+
Sbjct: 249 ILQRL--LDEREKVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNL 306
Query: 259 RISCVCLYGGAPKGPQLRDIERGADIVVATPGRLNDIL---EMRRISLHQISYLVLDEAD 315
+ V + GG Q R ++ +IVVATPGRL +++ E + LH +S+ VLDEAD
Sbjct: 307 SVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEAD 366
Query: 316 RMLDMGFEPQIRKIVNEVPA------------------------RRQTLMYTAT------ 345
RM++ G +++ I++ +P +RQT +++AT
Sbjct: 367 RMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSD 426
Query: 346 WPKEVRKIAADLL------VNPVQV---------NIGNVDELVANKSITQHIE----VLP 386
+ K++++ ++ VN ++V N+ +D L + IE
Sbjct: 427 FRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNVAIID-LTTTSILAPKIEESFIKCE 485
Query: 387 PTDKHRRLEQILRSQDQGSKIIIFCSTKKMCDQLARNLTRQFG--AAAIHGDKSQAERDH 444
+K L IL QG + I+FC++ ++ L + G + + Q R
Sbjct: 486 EKEKDAYLYYILSVHGQG-RTIVFCTSVTDLRHIS-GLLKILGLDVCTLFSEMKQRARLK 543
Query: 445 VLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHR 490
+ +FR + +L+ATD+ ARG+DIK++R +++Y P E YVHR
Sbjct: 544 SIDRFRASENGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHR 589
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 187/422 (44%), Gaps = 71/422 (16%)
Query: 166 LPPEILKEVQNAGFSAPTPIQAQSWPIALQ----SRDIVAIAKTGSGKTLGYLIPAFFHL 221
L P++ K ++N G S+ P+Q W + RDI + TGSGKTL Y +P +
Sbjct: 38 LNPKLKKALENMGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPI---V 94
Query: 222 KRTGNNSKMGPTVLVLSPTRELATQIQD------EAVKFGKSSRISCVCLYGGAP---KG 272
+ + LV+ PTR+LA Q++D AV S + + G K
Sbjct: 95 QLLASRPVRCLRALVVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLIKT 154
Query: 273 PQL------------RDIERGADIVVATPGRLND-ILEMRRISLHQISYLVLDEADRMLD 319
P+L +++E DI+VATPGRL D I + +L + YLV+DE DR+L
Sbjct: 155 PKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLR 214
Query: 320 MGFE---PQIRKIVNE------------VPA--------RRQTL---MYTATWPKEVRKI 353
++ P + ++ VP+ RRQ++ +P+ V+ +
Sbjct: 215 EAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMV 274
Query: 354 -AADLLVNP---VQVNIGNVDELVANKS---ITQHIEVLPPTD----KHRRLEQILRSQD 402
+A L +P +Q+++ + + S + + +E L K L +L+S
Sbjct: 275 LSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICETGMKPVYLVALLKSW- 333
Query: 403 QGSKIIIFCS----TKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLV 458
+G K IIF S T+++C L + A G +Q+ R L FR G VLV
Sbjct: 334 EGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQVLV 393
Query: 459 ATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDL 518
A+D RG+D+K + V+NYD P + ++HR +T + + + S L
Sbjct: 394 ASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSKL 453
Query: 519 IK 520
++
Sbjct: 454 LE 455
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 158/372 (42%), Gaps = 37/372 (9%)
Query: 148 TVSGDNVPPPFTSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGS 207
+V+ VP +P IL ++ GF PT IQ ++ P RD + A+TGS
Sbjct: 65 SVTETTVPLTLRQICQGFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGS 124
Query: 208 GKTLGYLIPAFFHLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCV-CLY 266
GKTL YL+ F N + +++ PTREL Q+ A S I C
Sbjct: 125 GKTLTYLLLIF----SLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTV 180
Query: 267 GGAPKGPQLRDIERGAD-----IVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMG 321
G LR + I+VAT L +LE + + LV+DE D +
Sbjct: 181 MALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSS 240
Query: 322 FEP-QIRKIVNEVPA--RRQTLMYTATWPKEVRKIAADLLV------NPVQVNIGNVDEL 372
+ +RK++ + +RQT+ +A+ P+ + D + + V V++ + +
Sbjct: 241 KQVGSVRKLLTSFSSCDKRQTVFASASIPQH-KHFVHDCIQQKWTKRDVVHVHVSAIMPM 299
Query: 373 VANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIFC--------------STKKMCD 418
+ + T+KH+ L +L S D IIF ST + +
Sbjct: 300 --PLCLLHRFVMCEKTNKHQVLLALLES-DAPESAIIFVGEQSEKSKKAGNDPSTTLLME 356
Query: 419 QLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNY 478
L + + GD + R L++ R G +LV+TD+AARG+D+ + + N+
Sbjct: 357 FLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNF 416
Query: 479 DFPTGVEDYVHR 490
D P V DY+HR
Sbjct: 417 DLPQTVTDYLHR 428
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 115/224 (51%), Gaps = 16/224 (7%)
Query: 149 VSGDNVPPPFTSFGSTG-----LPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIA 203
V+G+ V + S+G L PE+L+ + ++GF P+ +Q + P A+ D++ A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 204 KTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKSSRISCV 263
K+G GKT +++ ++ + + LVL TRELA QI +E V+F + V
Sbjct: 91 KSGMGKTAVFVLSTLQQIEPSPGQV----SALVLCHTRELAYQICNEFVRFSTYLPDTKV 146
Query: 264 CLYGGAPKGPQLRDIERGA--DIVVATPGRLNDILEMRRISLHQISYLVLDEADRMLD-M 320
++ G +D+ + IVV TPGR+ + + +SL + + +LDE D+ML+ +
Sbjct: 147 SVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESL 206
Query: 321 GFEPQIRKIVNEVPARRQTLMYTATWPKEVR----KIAADLLVN 360
+++I P +Q +M++AT KE+R K D L N
Sbjct: 207 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDFLEN 250
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 119/247 (48%), Gaps = 18/247 (7%)
Query: 292 LNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMY-TATWPKEV 350
+ D LE +S+ S+ V + R+ GF ++ V R LM+ + T E
Sbjct: 244 MQDFLENETVSVRLFSFGVENSEWRLCSFGF-----IVLVWVSMFRAILMFHSKTHIFEE 298
Query: 351 RKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKIIIF 410
++ ++P+++ + + +L + + QH L +K+R+L +L + D ++++IF
Sbjct: 299 KRWTR---ISPMEIYVDDEAKLTLH-GLVQHYIKLSEMEKNRKLNDLLDALD-FNQVVIF 353
Query: 411 CSTKKMCDQLARNLTR-QFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDI 469
+ +L + L F + IH SQ ER F+ G +LVATD+ RG+DI
Sbjct: 354 VKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDI 413
Query: 470 KDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAKYASDLIKVLEGANQRV 529
+ + +V+NYD P + Y+HR+ LA TF A ASD +VL +R
Sbjct: 414 ERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVAS-----ASD-SEVLNQVQERF 467
Query: 530 PSELRDM 536
+++++
Sbjct: 468 EVDIKEL 474
>AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:12251845-12254672
FORWARD LENGTH=502
Length = 502
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 142/319 (44%), Gaps = 31/319 (9%)
Query: 231 GPTVLVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQ---LRDIERGADIVVA 287
P +L L P++ A+Q++ K K I V L+ GAP Q L+ +E + +VA
Sbjct: 196 SPFLLYLVPSQSKASQVR-SVCKALKGIGIHTVSLHQGAPLDHQISGLKSVE--PEFIVA 252
Query: 288 TPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWP 347
TP RL +I+ ++ + + +S LV+DE + G+ ++ I + ++ QT+++ ++
Sbjct: 253 TPERLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAVKSIKQAISSKHQTIVFNNSFS 312
Query: 348 KEVRKIAADLL---VNPVQVNIGNVDELVANK--SITQHIEVLPPTDKHRRLEQILRSQD 402
+ L VN V VN E VA++ ITQ + V +K +L++ + D
Sbjct: 313 ASIIPAVQSFLGGSVNRVTVN-----ESVASQGSCITQTVSVCASEEK--KLQKFAKHLD 365
Query: 403 QGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDV 462
S +I+ TK+ + + + G D LS+ + R PV D
Sbjct: 366 SSSSKLIYIVTKE------ESFKKIMAILKLKGISVSTSSDSKLSEVKKSRKPVAHLIDF 419
Query: 463 AARGLD---IKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXLAYTFFAEQDAK--YASD 517
LD ++D V+ DF +E Y + + +++ E+DA A
Sbjct: 420 --EQLDTTVMRDSETVLLPDFFPSIEIYTQILTSMARESAHGVLHSYITEKDAASYQAGP 477
Query: 518 LIKVLEGANQRVPSELRDM 536
L+ VLE Q VP R+M
Sbjct: 478 LVNVLENCGQNVPDRWRNM 496
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 27/192 (14%)
Query: 159 TSFGSTGLPPEILKEVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAF 218
S+ S GL + ++++GF P+ QA P L +D++ A+TGSGKT GYL P
Sbjct: 80 VSWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPII 139
Query: 219 FHLKRTGNNSK----------MGPTVLVLSPTRELATQIQDEAVKFGKSS-----RISCV 263
L T +S+ + L+L P L Q+ R+ V
Sbjct: 140 DQLTNTALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRMVNGLVDEDGNPLLRVEAV 199
Query: 264 CLYGGAPKGPQLRDIERGADIVVATPGRLNDILE---MRRIS-LHQISYLVLDEADRMLD 319
C G P +R DI+V+TP L + +E RR+ L + Y+V DEAD +L
Sbjct: 200 CGSQGWP--------DRLPDIIVSTPAALLNNIEPKRNRRLEFLRCVKYVVFDEADMLLC 251
Query: 320 MGFEPQIRKIVN 331
F+ QI +++N
Sbjct: 252 GSFQNQIIRLIN 263
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 27/230 (11%)
Query: 284 IVVATPGRLNDILEMRRISLHQISYLVLDEADRMLDMGFEP-QIRKIVNEVPA--RRQTL 340
I+VAT L +LE + + LV+DE D + + +RK++ + +RQT+
Sbjct: 46 ILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTV 105
Query: 341 MYTATWPKEVRKIAADLLV------NPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRL 394
+A+ P+ + D + + V V++ + + + + T+KH+ L
Sbjct: 106 FASASIPQH-KHFVHDCIQQKWTKRDVVHVHVSAI--MPMPLCLLHRFVMCEKTNKHQVL 162
Query: 395 EQILRSQDQGSKIIIFC--------------STKKMCDQLARNLTRQFGAAAIHGDKSQA 440
+L S D IIF ST + + L + + GD +
Sbjct: 163 LALLES-DAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFN 221
Query: 441 ERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHR 490
R L++ R G +LV+TD+AARG+D+ + + N+D P V DY+HR
Sbjct: 222 SRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHR 271
>AT3G05740.1 | Symbols: RECQI1 | RECQ helicase l1 |
chr3:1698180-1701228 FORWARD LENGTH=606
Length = 606
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 144/325 (44%), Gaps = 42/325 (12%)
Query: 184 PIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVLVLSPTREL 243
P+Q Q+ +++ +D + TG GK+L Y +PA K G T+ V+SP L
Sbjct: 209 PLQHQACRASMERKDCFVLMPTGGGKSLCYQLPATL---------KAGVTI-VISP---L 255
Query: 244 ATQIQDEAV----KFG------KSSRISCVCLYGGAPKGPQLRDIERGADIVVATPGRL- 292
+ IQD+ V KFG S + S A +LR ++ TP ++
Sbjct: 256 LSLIQDQIVALNLKFGIPATFLNSQQTS----SQAAAVLQELRRDNPSCKLLYVTPEKIA 311
Query: 293 --NDILEMRRISLHQ--ISYLVLDEADRMLDMG--FEPQIRKI--VNEVPARRQTLMYTA 344
+ LE R + ++ V+DEA + G F P R++ + + R + TA
Sbjct: 312 GSSSFLETLRCLDRKGLLAGFVVDEAHCVSQWGHDFRPDYRELGCLKQNFPRVPVMALTA 371
Query: 345 TWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQG 404
T + V D+L +++ V ++ ++ ++ ++ + ++L+++LR + +
Sbjct: 372 TATESV---CQDVL-KSLRIPRAPVLKMSFDRINLKYEVIVKTKEPLKQLQELLRDRFKD 427
Query: 405 SKIIIFCSTKKMCDQLARNLTRQFGAAAI--HGDKSQAERDHVLSQFRTGRSPVLVATDV 462
I++C +K C +A+ L + + H +R V +++TG ++ AT
Sbjct: 428 QSGIVYCLSKSECVDVAKFLNEKCKVKTVYYHAGVPAKQRVDVQRKWQTGEVRIVCATIA 487
Query: 463 AARGLDIKDIRVVVNYDFPTGVEDY 487
G+D D+R V++ VE Y
Sbjct: 488 FGMGIDKADVRFVIHNTLSKAVESY 512
>AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase
(RECQl4A) | chr1:3648032-3654997 REVERSE LENGTH=1188
Length = 1188
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 137/325 (42%), Gaps = 44/325 (13%)
Query: 184 PIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVLVLSPTREL 243
P Q + + D+ + TG GK+L Y +PA G LV+SP L
Sbjct: 456 PNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALI----------CGGITLVISP---L 502
Query: 244 ATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIER------GADIVVATPGRL--NDI 295
+ IQD+ + +++ I L G QL+ + ++ TP ++ +D
Sbjct: 503 VSLIQDQIMNLLQAN-IPAASLSAGMEWAEQLKIFQELNSEHSKYKLLYVTPEKVAKSDS 561
Query: 296 LEMRRISLHQ---ISYLVLDEADRMLDMG--FEPQIRK--IVNEVPARRQTLMYTATWPK 348
L +L+ ++ V+DEA + G F P + I+ + L TAT
Sbjct: 562 LLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNIPVLALTATATA 621
Query: 349 EVRKIAADLLVNPVQVNIGNVDELVANKSITQ---HIEVLPPTDKHRR-LEQILRSQDQG 404
V++ L G V+ +V +S + V+P T K +++ ++
Sbjct: 622 SVKEDVVQAL--------GLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIKENHFD 673
Query: 405 SKIIIFCSTKKMCDQLARNLTRQFG--AAAIHGDKSQAERDHVLSQFRTGRSPVLVATDV 462
II+C ++ C++++ L ++FG AA HG +R + +Q+ ++ AT
Sbjct: 674 ECGIIYCLSRMDCEKVSERL-QEFGHKAAFYHGSMEPEQRAFIQTQWSKDEINIICATVA 732
Query: 463 AARGLDIKDIRVVVNYDFPTGVEDY 487
G++ D+R V+++ P +E Y
Sbjct: 733 FGMGINKPDVRFVIHHSLPKSIEGY 757
>AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase
L4B | chr1:22431093-22438302 REVERSE LENGTH=1150
Length = 1150
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 135/319 (42%), Gaps = 60/319 (18%)
Query: 198 DIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVLVLSPTRELATQIQDEAVKFGKS 257
D+ + TG GK+L Y +PA LV+SP L + IQD+ + ++
Sbjct: 486 DVFVLMPTGGGKSLTYQLPALL----------CAGITLVISP---LVSLIQDQIMNLLQT 532
Query: 258 SRISCVCLYGGAPKGPQLRDIERGAD------IVVATPGRLN---------DILEMRRIS 302
+ IS L G QL ++ + ++ TP ++ +IL R +
Sbjct: 533 N-ISAASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEKVAKSESLLRHLEILNSRSL- 590
Query: 303 LHQISYLVLDEADRMLDMG--FEPQ------IRKIVNEVPARRQTLMYTATWPKEVRKIA 354
++ V+DEA + G F P +++ +P L TAT V++
Sbjct: 591 ---LARFVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNIPM----LALTATATTSVKE-- 641
Query: 355 ADLLVNPVQVNIGNVDELVANKSITQ---HIEVLPPTDKHRR-LEQILRSQDQGSKIIIF 410
+ VQ +G V+ +V +S + V+P T+K +++ +R II+
Sbjct: 642 -----DVVQA-LGLVNCVVFRQSFNRPNLWYSVVPKTNKCLEDIDKFIRENHFDECGIIY 695
Query: 411 CSTKKMCDQLARNLTRQFG--AAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLD 468
C ++ C+++ L R FG AA HG +R V Q+ ++ AT G++
Sbjct: 696 CLSRMDCEKVTEAL-RVFGHKAAFYHGSMDPGKRAFVQKQWSKDEINIICATVAFGMGIN 754
Query: 469 IKDIRVVVNYDFPTGVEDY 487
D+R V+++ P +E Y
Sbjct: 755 KPDVRFVIHHSLPKSIEGY 773
>AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936233-16940172 FORWARD
LENGTH=713
Length = 713
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 144/320 (45%), Gaps = 38/320 (11%)
Query: 186 QAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVLVLSPTRELAT 245
Q ++ + RD + TG GK++ Y IPA L + G + P ++ L + +A
Sbjct: 41 QLEAIQAVVSGRDCFCLMPTGGGKSICYQIPA---LAKPGIVLVVSP-LIALMENQVMAL 96
Query: 246 QIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIERG---ADIVVATPGRLND---ILEMR 299
+ + A ++ S++ + V K D++ G ++ TP + +L++R
Sbjct: 97 KEKGIAAEYLSSTQATHV-------KNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLR 149
Query: 300 RI-SLHQISYLVLDEADRMLDMG--FEPQIRKI--VNEVPARRQTLMYTATWPKEVRKIA 354
++ S ++ + +DEA + G F P R++ + + A L TAT +V+K
Sbjct: 150 KLHSRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDV 209
Query: 355 ADLLV--NPVQV----NIGNVDELVANKSITQHIEVLPPTDKHRRLEQILRSQDQGSKII 408
D L NP+ + N N+ V K + + + L +L+S II
Sbjct: 210 IDSLNLRNPLVLKSSFNRPNIFYEVRYKDLLD--------NAYTDLGNLLKSCGNICAII 261
Query: 409 IFCSTKKMCDQLARNLTRQ-FGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGL 467
+C + CD L+ +L+ +AA H + R VL + + + ++VAT G+
Sbjct: 262 -YCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGI 320
Query: 468 DIKDIRVVVNYDFPTGVEDY 487
D KD+R+V +++ P +E +
Sbjct: 321 DKKDVRMVCHFNIPKSMESF 340
>AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2 |
chr1:11232422-11237412 FORWARD LENGTH=705
Length = 705
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 137/332 (41%), Gaps = 42/332 (12%)
Query: 178 GFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVLVL 237
G S Q + + RD++ I G GK+L Y +PA G T LV+
Sbjct: 86 GISKYRANQKEIINAIMTGRDVLVIMAAGGGKSLCYQLPAMLR----------GGTTLVV 135
Query: 238 SPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQ---LRDIERGAD---IVVATPGR 291
SP L + IQD+ + + IS L + K + + +E+G D I+ TP +
Sbjct: 136 SP---LLSLIQDQVMGLA-ALGISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPEK 191
Query: 292 LNDILE-MRRIS-LH---QISYLVLDEADRMLDMG--FEPQIRK--IVNEVPARRQTLMY 342
++ M ++ H ++S + +DEA G F P + I+ + +
Sbjct: 192 VSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPKVPMVAL 251
Query: 343 TATWPKEVRKIAADLLVNP------VQVNIGNVDELVANKSITQHIEVLPPTDKHRRLEQ 396
TAT ++V+ ++L P VN N+ V KS + V E
Sbjct: 252 TATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVDEIA------EF 305
Query: 397 ILRSQDQGSKIIIFCSTKKMCDQLARNL-TRQFGAAAIHGDKSQAERDHVLSQFRTGRSP 455
I S I++C ++K C+Q+A +L R A H D R+ V ++ +
Sbjct: 306 IRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQ 365
Query: 456 VLVATDVAARGLDIKDIRVVVNYDFPTGVEDY 487
V+V T G++ D+R V+++ +E Y
Sbjct: 366 VIVGTVAFGMGINKPDVRFVIHHSLSKSMETY 397
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 134/326 (41%), Gaps = 45/326 (13%)
Query: 186 QAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFFHLKRTGNNSKMGPTVLVLSPTRELAT 245
Q Q+ + L + + TG+GK+L Y IPA + LV+SP L
Sbjct: 274 QLQAIKMILGGSSTMLVLPTGAGKSLCYQIPAMI----------LPGITLVVSPLVSLMI 323
Query: 246 QIQDEAVKFGKSSRISCVCLYGGAPKGPQ-----LRDIERGA-DIVVATPGRLNDI--LE 297
K +S + + P+ LR ++ G ++ +P RL ++ L
Sbjct: 324 DQLKHLPSIIKGGLLS-------SSQRPEEATETLRKLKEGIIKVLFVSPERLLNVEFLS 376
Query: 298 MRRISLHQISYLVLDEADRMLDM--GFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIAA 355
M R+SL +S +V+DEA + + F P ++ + +++++ + + + A
Sbjct: 377 MFRMSL-SVSLVVVDEAHCVSEWSHNFRPSYMRL-------KASMLFSELKAECILAMTA 428
Query: 356 DLLVNPVQVNIGNVD----ELVANKSITQHIEVLPPTDKHRRLEQILRSQD-----QGSK 406
+Q + +++ L+ + + E+ R++ +L + +
Sbjct: 429 TATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSVSLSGANRMKDLLILMESPPYKEIRS 488
Query: 407 IIIFCSTKKMCDQLARNL-TRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAAR 465
II++C + D +++ L A H +R + F + + V+VAT
Sbjct: 489 IIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRVVVATVAFGM 548
Query: 466 GLDIKDIRVVVNYDFPTGVEDYVHRI 491
GLD D+ V+++ P +E+YV I
Sbjct: 549 GLDKGDVGAVIHFSVPGSMEEYVQEI 574
>AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936788-16940172 FORWARD
LENGTH=620
Length = 620
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 408 IIFCSTKKMCDQLARNLTRQ-FGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARG 466
II+C + CD L+ +L+ +AA H + R VL + + + ++VAT G
Sbjct: 167 IIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMG 226
Query: 467 LDIKDIRVVVNYDFPTGVEDY 487
+D KD+R+V +++ P +E +
Sbjct: 227 IDKKDVRMVCHFNIPKSMESF 247