Miyakogusa Predicted Gene
- Lj2g3v1451700.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1451700.1 Non Chatacterized Hit- tr|I1JC97|I1JC97_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23939
PE,61.06,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Cysteine proteinases,NULL; UCH,Peptidase ,gene.g41559.t1.1
(601 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 | ... 304 1e-82
AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 | ... 262 6e-70
AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 254 1e-67
AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 254 2e-67
AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 249 4e-66
AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 249 4e-66
AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 | ... 238 7e-63
AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 | ... 142 9e-34
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ... 141 1e-33
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ... 102 8e-22
AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 | ch... 89 6e-18
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas... 89 7e-18
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ... 88 1e-17
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas... 87 5e-17
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | ... 75 9e-14
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 72 1e-12
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 72 1e-12
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specifi... 72 1e-12
AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 69 9e-12
AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 69 9e-12
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ... 69 1e-11
AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch... 68 2e-11
AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific proteas... 66 8e-11
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific... 65 2e-10
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 63 6e-10
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 63 6e-10
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 63 8e-10
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 62 8e-10
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 62 1e-09
AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific proteas... 62 1e-09
AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 57 4e-08
AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 57 4e-08
AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 57 4e-08
>AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 |
chr5:26157863-26161096 FORWARD LENGTH=731
Length = 731
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/342 (48%), Positives = 201/342 (58%), Gaps = 58/342 (16%)
Query: 235 RCAVDTMQSICLKEAGVSSPLTEETTLIGYTFGGYLRSKIKCLKCLGKSERYERMMDLTV 294
RCAVDTMQS+ LKEA + P EETTL+G TFGGYL SKIKC+ CL KSER E MMDLTV
Sbjct: 420 RCAVDTMQSVFLKEAPAAGPFAEETTLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTV 479
Query: 295 EIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQ 354
EIDG+IG+LEEAL QFTA E+LD +N+Y C RCKSY+KAKKKL ILE PNILT+VLKRFQ
Sbjct: 480 EIDGDIGSLEEALAQFTAYEVLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQ 539
Query: 355 ------------FPEVLNMAPYMSG-TKDKYPFYNLYAVVVHLDIMNAAFSGHYVCYVKN 401
FPE+L+++PYMS +P Y+LYAVVVHLD M+ FSGHYVCY+K
Sbjct: 540 SDNFGKLSKPIHFPELLDISPYMSDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIKT 599
Query: 402 IQGEWFRTDDSRVEPVEFSRVLSERAYMLLYARHSPKPLGSVSSNAISSTGKLKRRNLEA 461
+ G+WF+ DDS V PV+ VL E AYMLLYAR SP+P VS N + +RRNL A
Sbjct: 600 LDGDWFKIDDSNVFPVQLETVLLEGAYMLLYARDSPRP---VSKNGGRKSK--QRRNLAA 654
Query: 462 IPASSKTRSNSMATSADXXXXXXXXXXXXXGDDTFSNEIAYPEELRFSNGGRNTM---VD 518
IP+ + +G N++ VD
Sbjct: 655 IPSRKGNKKQ-------------------------------------RDGDNNSLLPRVD 677
Query: 519 XXXXXXXXXXXXXXXXXXXXIKDSASTADFSDYIFGEVGPNW 560
KDS+ + SDY+FG V P W
Sbjct: 678 WSSGSLSSMFSSSDTTSSCSTKDSSGIENLSDYLFGGVEPVW 719
>AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 |
chr4:12679493-12684528 REVERSE LENGTH=1008
Length = 1008
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 129/220 (58%), Positives = 158/220 (71%), Gaps = 16/220 (7%)
Query: 235 RCAVDTMQSICLKEAG---VSSPLTEETTLIGYTFGGYLRSKIKCLKCLGKSERYERMMD 291
R VDTMQS+C+K + S E+TTLIG TFGGYLRSKIKC+KC KSE E+MMD
Sbjct: 633 RFVVDTMQSVCIKASEYDMTKSSKLEDTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMD 692
Query: 292 LTVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLK 351
LTVEIDG+I TL++AL +FT EILD +NKY C CKSYE+AKKKL I E PN+LTI LK
Sbjct: 693 LTVEIDGDISTLDDALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALK 752
Query: 352 RFQ------------FPEVLNMAPYMSGTKDKYPFYNLYAVVVHLDIMNAAFSGHYVCYV 399
RFQ FPE L++APY+SG +K Y LY V+VHLD+MNAAFSGHYVCY+
Sbjct: 753 RFQAGKFGKLNKLIRFPETLDLAPYVSGGSEKSHDYKLYGVIVHLDVMNAAFSGHYVCYI 812
Query: 400 KNIQGEWFRTDDSRVEPVEFSRVLSERAYMLLYARHSPKP 439
+N Q +W++ DDS V + R+L++ AYML YAR +P P
Sbjct: 813 RN-QNKWYKADDSTVVTSDVERILTKGAYMLFYARCTPTP 851
>AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=928
Length = 928
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 157/220 (71%), Gaps = 15/220 (6%)
Query: 235 RCAVDTMQSICLKEAGVSS---PLTEETTLIGYTFGGYLRSKIKCLKCLGKSERYERMMD 291
R V +MQSICL+ G + P +ETTL+ + FGG LRSK+KCL+C +SERYE +MD
Sbjct: 533 RLLVASMQSICLERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLRCDHESERYENIMD 592
Query: 292 LTVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLK 351
LT+EI G + +L++AL QFT PE LD +N Y CSRC Y +A+K+L+I EAPNILTIVLK
Sbjct: 593 LTLEIYGWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLK 652
Query: 352 RFQ------------FPEVLNMAPYMSGTKDKYPFYNLYAVVVHLDIMNAAFSGHYVCYV 399
RFQ FPE+L+M P+M+ T D P Y LYAV+VHLD +NA+FSGHY+ YV
Sbjct: 653 RFQEGRYGKINKCISFPEMLDMIPFMTRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYV 712
Query: 400 KNIQGEWFRTDDSRVEPVEFSRVLSERAYMLLYARHSPKP 439
K+++G W+R DDS + PV ++V+SE AYML Y R P+P
Sbjct: 713 KDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFYMRSYPRP 752
>AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=924
Length = 924
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 157/220 (71%), Gaps = 15/220 (6%)
Query: 235 RCAVDTMQSICLKEAGVSS---PLTEETTLIGYTFGGYLRSKIKCLKCLGKSERYERMMD 291
R V +MQSICL+ G + P +ETTL+ + FGG LRSK+KCL+C +SERYE +MD
Sbjct: 529 RLLVASMQSICLERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLRCDHESERYENIMD 588
Query: 292 LTVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLK 351
LT+EI G + +L++AL QFT PE LD +N Y CSRC Y +A+K+L+I EAPNILTIVLK
Sbjct: 589 LTLEIYGWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLK 648
Query: 352 RFQ------------FPEVLNMAPYMSGTKDKYPFYNLYAVVVHLDIMNAAFSGHYVCYV 399
RFQ FPE+L+M P+M+ T D P Y LYAV+VHLD +NA+FSGHY+ YV
Sbjct: 649 RFQEGRYGKINKCISFPEMLDMIPFMTRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYV 708
Query: 400 KNIQGEWFRTDDSRVEPVEFSRVLSERAYMLLYARHSPKP 439
K+++G W+R DDS + PV ++V+SE AYML Y R P+P
Sbjct: 709 KDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFYMRSYPRP 748
>AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10479341 REVERSE LENGTH=672
Length = 672
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 148/220 (67%), Gaps = 15/220 (6%)
Query: 235 RCAVDTMQSICLKEAG---VSSPLTEETTLIGYTFGGYLRSKIKCLKCLGKSERYERMMD 291
R A+D MQS+CL E G V P +ETTLI Y FGG L+S+++C C S++YE MMD
Sbjct: 265 RFAIDMMQSVCLDEFGGEKVVPPRAQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMD 324
Query: 292 LTVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLK 351
LTVEI G+ +LEE L QFTA E L DN Y C RC Y KA K+L+I APNILTI LK
Sbjct: 325 LTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALK 384
Query: 352 RFQ------------FPEVLNMAPYMSGTKDKYPFYNLYAVVVHLDIMNAAFSGHYVCYV 399
RFQ FPE ++ PYMSG + Y LYAV+VHLD++NA+F GHY+CYV
Sbjct: 385 RFQGGRFGKLNKRISFPETFDLGPYMSGGGEGSDVYKLYAVIVHLDMLNASFFGHYICYV 444
Query: 400 KNIQGEWFRTDDSRVEPVEFSRVLSERAYMLLYARHSPKP 439
K+ +G W+R DDS VE VE VLS+RAYMLLY+R P+P
Sbjct: 445 KDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLYSRVQPRP 484
>AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10478388 REVERSE LENGTH=502
Length = 502
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 148/220 (67%), Gaps = 15/220 (6%)
Query: 235 RCAVDTMQSICLKEAG---VSSPLTEETTLIGYTFGGYLRSKIKCLKCLGKSERYERMMD 291
R A+D MQS+CL E G V P +ETTLI Y FGG L+S+++C C S++YE MMD
Sbjct: 95 RFAIDMMQSVCLDEFGGEKVVPPRAQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMD 154
Query: 292 LTVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLK 351
LTVEI G+ +LEE L QFTA E L DN Y C RC Y KA K+L+I APNILTI LK
Sbjct: 155 LTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALK 214
Query: 352 RFQ------------FPEVLNMAPYMSGTKDKYPFYNLYAVVVHLDIMNAAFSGHYVCYV 399
RFQ FPE ++ PYMSG + Y LYAV+VHLD++NA+F GHY+CYV
Sbjct: 215 RFQGGRFGKLNKRISFPETFDLGPYMSGGGEGSDVYKLYAVIVHLDMLNASFFGHYICYV 274
Query: 400 KNIQGEWFRTDDSRVEPVEFSRVLSERAYMLLYARHSPKP 439
K+ +G W+R DDS VE VE VLS+RAYMLLY+R P+P
Sbjct: 275 KDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLYSRVQPRP 314
>AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 |
chr4:15336007-15339506 REVERSE LENGTH=631
Length = 631
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 145/215 (67%), Gaps = 15/215 (6%)
Query: 235 RCAVDTMQSICLKEAG---VSSPLTEETTLIGYTFGGYLRSKIKCLKCLGKSERYERMMD 291
R A+D MQS+CL E G + P ++ETTLI Y FGG L+S+++C C S++YE MMD
Sbjct: 259 RYAIDMMQSVCLDEFGGEKIVPPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMD 318
Query: 292 LTVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLK 351
L VE+ G+ G+LEE L QFTA E L DN Y C RC Y KA K+LTI APNILTI LK
Sbjct: 319 LIVEMHGDAGSLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALK 378
Query: 352 RFQ------------FPEVLNMAPYMSGTKDKYPFYNLYAVVVHLDIMNAAFSGHYVCYV 399
R+Q FPE L++ PYMS D Y LYAV+VHLD++NA+F GHY+CY+
Sbjct: 379 RYQGGRYGKLNKRISFPETLDLNPYMSEGGDGSDVYKLYAVIVHLDMLNASFFGHYICYI 438
Query: 400 KNIQGEWFRTDDSRVEPVEFSRVLSERAYMLLYAR 434
K+ G W+R DDS +E VE VLS+RAYMLLY+R
Sbjct: 439 KDFCGNWYRIDDSEIESVELEDVLSQRAYMLLYSR 473
>AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 |
chr5:23470218-23473997 REVERSE LENGTH=859
Length = 859
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 112/188 (59%), Gaps = 16/188 (8%)
Query: 260 TLIGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDKD 319
+L+ FGG LRS++KC +C S +++ +DL+++I + +L+ AL +FTA E+LD
Sbjct: 225 SLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI-SKADSLQRALSRFTAVELLDNG 283
Query: 320 NK-YNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQ------------FPEVLNMAPYMS 366
K Y C RCK KAKK+LT+ +AP +LT+ LKRF+ F ++M P++S
Sbjct: 284 AKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRSEKIDRKVDFTSAIDMKPFVS 343
Query: 367 GTKDKYPFYNLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVEFSRVLSER 426
G + Y LY V+VH ++ SGHY C+V+ G W+ DD+RV V V +++
Sbjct: 344 GPHEGNLKYTLYGVLVHYG--RSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQK 401
Query: 427 AYMLLYAR 434
AYML Y R
Sbjct: 402 AYMLFYVR 409
>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
chr3:4811953-4815210 REVERSE LENGTH=661
Length = 661
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 124/207 (59%), Gaps = 19/207 (9%)
Query: 260 TLIGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDKD 319
+++ FGG L+S++KCL C +S + + +MD+++EI + +++E+L +F EILD +
Sbjct: 150 SVVKEIFGGALQSQVKCLSCGAESNKADEIMDISLEIL-QSSSVKESLQKFFQSEILDGN 208
Query: 320 NKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRF------------QFPEVLNMAPYMS- 366
NKY C C+ A+K+++IL+APNIL I LKRF F E+L ++ +MS
Sbjct: 209 NKYRCESCEKLVTARKQMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSK 268
Query: 367 GTKDKYPFYNLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVEFSRVLSER 426
+KD P Y L+ ++VH + SGHY YVK+ G W+ +DS V VLSE+
Sbjct: 269 ASKDPQPEYKLFGIIVHSGF--SPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEK 326
Query: 427 AYMLLYARHSPKPLGS---VSSNAISS 450
AY+L ++R + +P + V+SN +S
Sbjct: 327 AYILFFSRSNQRPASAKTLVTSNGTTS 353
>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
chr5:18965410-18968492 REVERSE LENGTH=732
Length = 732
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 22/214 (10%)
Query: 238 VDTMQSICLKEAG-VSSPLTEETTLIGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEI 296
+D ++ CL + S +++ ++ FGG L S + C C S +E + ++EI
Sbjct: 260 LDKLERCCLDPKNQLGSVSSQDLNIVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEI 319
Query: 297 DGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRF--- 353
+ ++ TL +AL FT E L+ ++ C CK +K+L + P + T LKRF
Sbjct: 320 E-DVNTLWKALESFTCVEKLE--DQLTCDNCKEKVTKEKQLRFDKLPPVATFHLKRFTND 376
Query: 354 -----------QFPEVLNMAPYMSGTKDK--YPFYNLYAVVVHLDIMNAAFSGHYVCYVK 400
+FP L+++P+MS D Y+LYA V H+ I A F GHY YV+
Sbjct: 377 GVTMEKIFDHIEFPLELDLSPFMSSNHDPEVSTRYHLYAFVEHIGI-RATF-GHYSSYVR 434
Query: 401 NIQGEWFRTDDSRVEPVEFSRVLSERAYMLLYAR 434
+ W DDS+V + RVLS AY+L YAR
Sbjct: 435 SAPETWHNFDDSKVTRISEERVLSRPAYILFYAR 468
>AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 |
chr2:9476733-9478825 REVERSE LENGTH=379
Length = 379
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 30/200 (15%)
Query: 259 TTLIGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDK 318
T + F G L ++ +CL+C + R E +DL+++I+ + ++ L F++ E L
Sbjct: 178 VTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDIE-QNSSITSCLKNFSSTETLHA 236
Query: 319 DNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQFPE------------VLNMAPYMS 366
++K+ C +C S ++A+K++ I + P+IL I LKRF++ E V + +S
Sbjct: 237 EDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLS 296
Query: 367 GTKDKYP--FYNLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVEFSRVL- 423
T D+Y Y+L+AVVVH + + GHYV VK+ W DD VE +E S V
Sbjct: 297 NTVDEYVDIEYSLFAVVVH--VGSGPNHGHYVSLVKS-HNHWLFFDDESVEIIEESAVQT 353
Query: 424 -----------SERAYMLLY 432
++ Y+LLY
Sbjct: 354 FFGSSQEYSSNTDHGYILLY 373
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
| chr2:9476733-9478825 REVERSE LENGTH=365
Length = 365
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 30/200 (15%)
Query: 259 TTLIGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDK 318
T + F G L ++ +CL+C + R E +DL+++I+ + ++ L F++ E L
Sbjct: 164 VTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDIE-QNSSITSCLKNFSSTETLHA 222
Query: 319 DNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQFPE------------VLNMAPYMS 366
++K+ C +C S ++A+K++ I + P+IL I LKRF++ E V + +S
Sbjct: 223 EDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLS 282
Query: 367 GTKDKYP--FYNLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVEFSRVL- 423
T D+Y Y+L+AVVVH + + GHYV VK+ W DD VE +E S V
Sbjct: 283 NTVDEYVDIEYSLFAVVVH--VGSGPNHGHYVSLVKS-HNHWLFFDDESVEIIEESAVQT 339
Query: 424 -----------SERAYMLLY 432
++ Y+LLY
Sbjct: 340 FFGSSQEYSSNTDHGYILLY 359
>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
chr4:9939914-9942698 FORWARD LENGTH=695
Length = 695
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 21/195 (10%)
Query: 265 TFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDKDNKYNC 324
F G L S ++C C SE YE+ + L++EI+ ++ TL AL FT E LD+ + C
Sbjct: 295 VFSGRLISGLRCCNCDYVSETYEKSVGLSLEIE-DVDTLGSALESFTRVEKLDE--QLTC 351
Query: 325 SRCKSYEKAKKKLTILEAPNILTIVLKRFQ--------------FPEVLNMAPYMSGTKD 370
C +K+L + + P + T LKRF+ P +++ PYM ++
Sbjct: 352 DNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNGLYMEKIYKHVKIPLEIDLQPYMRNIQE 411
Query: 371 K--YPFYNLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVEFSRVLSERAY 428
Y+LYA+V H A GHY YV++ W DDS+V ++ VLS+ +Y
Sbjct: 412 NEVSTKYHLYALVEHFGYSVAY--GHYSSYVRSAPKIWHHFDDSKVTRIDEDMVLSQDSY 469
Query: 429 MLLYARHSPKPLGSV 443
+L YAR + SV
Sbjct: 470 ILFYAREGTRWFSSV 484
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
| chr4:18511858-18514139 REVERSE LENGTH=371
Length = 371
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 95/178 (53%), Gaps = 18/178 (10%)
Query: 259 TTLIGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDK 318
T + F G L ++ +CL+C + R E +DL+++I+ + ++ L F++ E L
Sbjct: 169 VTWVHNIFQGILTNETRCLRCETVTARDETFLDLSLDIE-QNSSITSCLKNFSSTETLHA 227
Query: 319 DNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQFPE------------VLNMAPYMS 366
++K+ C +C S ++A+K++ I + P+IL I LKRF++ E V + +S
Sbjct: 228 EDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLS 287
Query: 367 GTKDKYP--FYNLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVEFSRV 422
T + Y Y+L+AVVVH + + GHYV VK+ W DD VE +E S V
Sbjct: 288 NTVEPYADVEYSLFAVVVH--VGSGPNHGHYVSLVKS-HNHWLFFDDENVEMIEESAV 342
>AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 |
chr5:3410638-3412559 FORWARD LENGTH=557
Length = 557
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 100/243 (41%), Gaps = 67/243 (27%)
Query: 257 EETTLIGY-TFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIG-------------- 301
EE I + F G LRS + C C S Y+ +D+++ +D G
Sbjct: 294 EECQCITHKAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLDSMNGFSPADCRKNRYSGG 353
Query: 302 --------TLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRF 353
TL L FT E L D K NC C ++ K+++I P +L + +KRF
Sbjct: 354 PSVNAIMPTLSGCLDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLPLLLCLHVKRF 413
Query: 354 ----------------QFPEVLNMAPYMSGTKDKYPF----------------------- 374
Q+P LNM+PY+S + F
Sbjct: 414 EHSLTRKTSRKIDSYLQYPFRLNMSPYLSSSIIGKRFGNRIFAFDGEGEYDSSSSSSPSA 473
Query: 375 -YNLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVEFSRVLSERAYMLLYA 433
+ ++AVV H ++ SGHYV Y++ ++G W+R DD+ + VE V YML YA
Sbjct: 474 EFEIFAVVTHKGMLE---SGHYVTYLR-LKGLWYRCDDAWINEVEEEVVRGCECYMLFYA 529
Query: 434 RHS 436
+ +
Sbjct: 530 QET 532
>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 302 TLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRF-------- 353
+L L F A E L D+ + C CK + +A KKL + + P+IL LKRF
Sbjct: 748 SLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKN 807
Query: 354 ------QFP-EVLNMAPYMSGTKDKYPFYNLYAVVVHLDIMNAAFSGHYVCYVKNI-QGE 405
FP L+++ Y+ D+ Y LYAV H GHY Y K I E
Sbjct: 808 KIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNH---YGGLGGGHYTAYAKLIDDNE 864
Query: 406 WFRTDDSRVEPVEFSRVLSERAYMLLYAR 434
W+ DDS V V S + + AY+L Y R
Sbjct: 865 WYHFDDSHVSSVNESEIKNSAAYVLFYRR 893
>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 302 TLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRF-------- 353
+L L F A E L D+ + C CK + +A KKL + + P+IL LKRF
Sbjct: 748 SLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKN 807
Query: 354 ------QFP-EVLNMAPYMSGTKDKYPFYNLYAVVVHLDIMNAAFSGHYVCYVKNI-QGE 405
FP L+++ Y+ D+ Y LYAV H GHY Y K I E
Sbjct: 808 KIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNH---YGGLGGGHYTAYAKLIDDNE 864
Query: 406 WFRTDDSRVEPVEFSRVLSERAYMLLYAR 434
W+ DDS V V S + + AY+L Y R
Sbjct: 865 WYHFDDSHVSSVNESEIKNSAAYVLFYRR 893
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific
protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067
Length = 1067
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 23/175 (13%)
Query: 260 TLIGYTFGGYLRSKIKCLKCLGKSERYERMMD---LTVEIDGEIGTLEEALGQFTAPEIL 316
T++ F G + C KC SE +M D L + + G + +L+ +L + + E L
Sbjct: 209 TIVQDLFSGSVSHVTTCSKCGRDSEASSKMEDFYALELNVKG-LKSLDASLNDYLSLEQL 267
Query: 317 DKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKR----------------FQFPEVLN 360
+ DN+Y C C + A + + + P ++T LKR F FP+VL+
Sbjct: 268 NGDNQYFCGSCNARVDATRCIKLRTLPPVITFQLKRCIFLPKTTAKKKITSSFSFPQVLD 327
Query: 361 MAPYMSGTKDKYPFYNLYAVVVHLDIMNAAFSGHYVCYVKNIQ-GEWFRTDDSRV 414
M ++ + Y+L AV++H +A SGHYV ++K+ + G W+ DD V
Sbjct: 328 MGSRLAESSQNKLTYDLSAVLIHKG--SAVNSGHYVAHIKDEKTGLWWEFDDEHV 380
>AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 302 TLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRF-------- 353
+L + L F E L D+ + C CK + +A KKL + P IL I LKRF
Sbjct: 765 SLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRFMKN 824
Query: 354 ------QFP-EVLNMAPYMSGTKDKYPF-YNLYAVVVHLDIMNAAFSGHYVCYVKNIQGE 405
FP + L+++ Y+S + + Y LYA+ H M GHY YV +
Sbjct: 825 KLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGG---GHYTAYVHHGGDR 881
Query: 406 WFRTDDSRVEPVEFSRVLSERAYMLLYAR 434
W+ DDS V + ++ + AY+L Y R
Sbjct: 882 WYDFDDSHVHQISQEKIKTSAAYVLFYKR 910
>AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 302 TLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRF-------- 353
+L + L F E L D+ + C CK + +A KKL + P IL I LKRF
Sbjct: 765 SLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRFMKN 824
Query: 354 ------QFP-EVLNMAPYMSGTKDKYPF-YNLYAVVVHLDIMNAAFSGHYVCYVKNIQGE 405
FP + L+++ Y+S + + Y LYA+ H M GHY YV +
Sbjct: 825 KLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGG---GHYTAYVHHGGDR 881
Query: 406 WFRTDDSRVEPVEFSRVLSERAYMLLYAR 434
W+ DDS V + ++ + AY+L Y R
Sbjct: 882 WYDFDDSHVHQISQEKIKTSAAYVLFYKR 910
>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
chr1:11902629-11906900 FORWARD LENGTH=892
Length = 892
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 302 TLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQFPEV--- 358
+L L F A E L D+ + C CK + +A KKL + + P+IL LKRF +
Sbjct: 734 SLFSCLEAFLAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYFKN 793
Query: 359 ------------LNMAPYMSGTKDKYPFYNLYAVVVHLDIMNAAFSGHYVCYVKNI-QGE 405
L+++ Y+ + Y LYA+ H GHY Y K + + +
Sbjct: 794 KIDTLVNFHIHDLDLSKYVKNEDGQSYLYELYAISNH---YGGLGGGHYTAYAKLMDETK 850
Query: 406 WFRTDDSRVEPVEFSRVLSERAYMLLYAR 434
W+ DDSRV V S + + AY+L Y R
Sbjct: 851 WYNFDDSRVSAVNESEIKTSAAYVLFYQR 879
>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
chr4:6523657-6528058 REVERSE LENGTH=923
Length = 923
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 302 TLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRF-------- 353
+L L F A E L D+ + C CK + +A KKL + + P+IL LKRF
Sbjct: 749 SLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKN 808
Query: 354 ------QFP-EVLNMAPYMSGTKDKYPFYNLYAVVVHLDIMNAAFSGHYVCYVKNI-QGE 405
FP L+++ Y+ + Y LYAV H GHY Y K I +
Sbjct: 809 KIDTFVNFPVHDLDLSKYVKNKNGQSYLYELYAVSNH---YGGLGGGHYTAYAKLIDDNK 865
Query: 406 WFRTDDSRVEPVEFSRVLSERAYMLLYAR 434
W+ DDS V V S + + AY+L Y R
Sbjct: 866 WYHFDDSHVSSVNESEIRNSAAYVLFYRR 894
>AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protease 1 |
chr2:13898431-13901870 REVERSE LENGTH=1083
Length = 1083
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 33/132 (25%)
Query: 333 AKKKLTILEAPNILTIVLKRF---------------QFPEVLNMAPYMSG--TKDKYPFY 375
A+KK+ I +AP +LTI LKRF F E ++++ YM +++ P Y
Sbjct: 954 ARKKVLINKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQEFIDLSKYMDTRCSEEDEPVY 1013
Query: 376 NLYAVVVHLDIMNAAFSGHYVCYVKNIQGE-------------WFRTDDSRVEPVEFSRV 422
L +V HL M+ GHYV Y++ E W+ DS+V P V
Sbjct: 1014 RLAGLVEHLGAMS---RGHYVSYIRGGHKERRDSDTKEPNSSIWYHASDSQVRPASLEEV 1070
Query: 423 LSERAYMLLYAR 434
L AY+L Y R
Sbjct: 1071 LRSEAYILFYER 1082
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific
protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
Length = 924
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 76/180 (42%), Gaps = 23/180 (12%)
Query: 274 IKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKA 333
I CL+ L + +Y T + E +L L F E L D + C +C +A
Sbjct: 744 ITCLESLPEVLKYGPT---TKKARSEPLSLYACLEAFLREEPLVPDEMWFCPQCNERRQA 800
Query: 334 KKKLTILEAPNILTIVLKRF--------------QFP-EVLNMAPYMSGTKDKYP-FYNL 377
KKL + P +L I LKRF FP L++ Y++ P Y L
Sbjct: 801 SKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDLDLTKYVANKNLSQPQLYEL 860
Query: 378 YAVVVHLDIMNAAFSGHYVCYVKNI-QGEWFRTDDSRVEPVEFSRVLSERAYMLLYARHS 436
YA+ H M SGHY ++K + W+ DDS + + V S AY+L Y R S
Sbjct: 861 YALTNHYGGMG---SGHYTAHIKLLDDSRWYNFDDSHISHINEDDVKSGAAYVLFYRRKS 917
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 54/226 (23%)
Query: 262 IGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDKDNK 321
I F G+ + I+C+ KS R E DL +++ G + + ++ E L+ DNK
Sbjct: 304 IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERLEGDNK 362
Query: 322 YNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQ----------------FPEVLNM---- 361
Y+ + + AKK + ++ P +L + LKRF+ FP L++
Sbjct: 363 YH-AEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRED 421
Query: 362 APYMSGTKDK--YPFYNLYAVVVHLDIMNAAFSGHYVCYVK-NIQGEWFRTDDSRVEPVE 418
Y+S DK Y L++V+VH GHY +++ + +W++ DD RV +
Sbjct: 422 GRYLSPDADKSVRNLYTLHSVLVH---SGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 478
Query: 419 FSRVLSER--------------------------AYMLLYARHSPK 438
R L E+ AYML+Y R S K
Sbjct: 479 VKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDK 524
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 54/226 (23%)
Query: 262 IGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDKDNK 321
I F G+ + I+C+ KS R E DL +++ G + + ++ E L+ DNK
Sbjct: 305 IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERLEGDNK 363
Query: 322 YNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQ----------------FPEVLNM---- 361
Y+ + + AKK + ++ P +L + LKRF+ FP L++
Sbjct: 364 YH-AEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRED 422
Query: 362 APYMSGTKDK--YPFYNLYAVVVHLDIMNAAFSGHYVCYVK-NIQGEWFRTDDSRVEPVE 418
Y+S DK Y L++V+VH GHY +++ + +W++ DD RV +
Sbjct: 423 GRYLSPDADKSVRNLYTLHSVLVH---SGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 479
Query: 419 FSRVLSER--------------------------AYMLLYARHSPK 438
R L E+ AYML+Y R S K
Sbjct: 480 VKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDK 525
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 55/227 (24%)
Query: 262 IGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDKDNK 321
I F G+ + I+C+ KS R E DL +++ G + + ++ E L+ DNK
Sbjct: 305 IQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERLEGDNK 363
Query: 322 YNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQ----------------FPEVLNM---- 361
Y+ + + AKK + ++ P +L + LKRF+ FP L++
Sbjct: 364 YH-AEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRED 422
Query: 362 APYMSGTKDK--YPFYNLYAVVVHLDIMNAAFSGHYVCYVK-NIQGEWFRTDDSRVEPVE 418
Y+S D+ Y L++V+VH GHY +++ + +W++ DD RV +
Sbjct: 423 GKYLSPDADRSVRNLYTLHSVLVH---SGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 479
Query: 419 FSRVLSER---------------------------AYMLLYARHSPK 438
R L E+ AYML+Y R S K
Sbjct: 480 LKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDK 526
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 55/227 (24%)
Query: 262 IGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDKDNK 321
I F G+ + I+C+ KS R E DL +++ G + + ++ E L+ DNK
Sbjct: 306 IQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERLEGDNK 364
Query: 322 YNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQ----------------FPEVLNM---- 361
Y+ + + AKK + ++ P +L + LKRF+ FP L++
Sbjct: 365 YH-AEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRED 423
Query: 362 APYMSGTKDK--YPFYNLYAVVVHLDIMNAAFSGHYVCYVK-NIQGEWFRTDDSRVEPVE 418
Y+S D+ Y L++V+VH GHY +++ + +W++ DD RV +
Sbjct: 424 GKYLSPDADRSVRNLYTLHSVLVH---SGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
Query: 419 FSRVLSER---------------------------AYMLLYARHSPK 438
R L E+ AYML+Y R S K
Sbjct: 481 LKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDK 527
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 55/227 (24%)
Query: 262 IGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDKDNK 321
I F G+ + I+C+ KS R E DL +++ G + + ++ E L+ DNK
Sbjct: 306 IQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERLEGDNK 364
Query: 322 YNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQ----------------FPEVLNM---- 361
Y+ + + AKK + ++ P +L + LKRF+ FP L++
Sbjct: 365 YH-AEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRED 423
Query: 362 APYMSGTKDK--YPFYNLYAVVVHLDIMNAAFSGHYVCYVK-NIQGEWFRTDDSRVEPVE 418
Y+S D+ Y L++V+VH GHY +++ + +W++ DD RV +
Sbjct: 424 GKYLSPDADRSVRNLYTLHSVLVH---SGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
Query: 419 FSRVLSER---------------------------AYMLLYARHSPK 438
R L E+ AYML+Y R S K
Sbjct: 481 LKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDK 527
>AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2
| chr1:1369306-1372290 REVERSE LENGTH=961
Length = 961
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 56/128 (43%), Gaps = 29/128 (22%)
Query: 333 AKKKLTILEAPNILTIVLKRFQ---------------FPEVLNMAPYMSG--TKDKYPFY 375
A KK+ I +AP +LTI LKRF F EV+++ YM + + P Y
Sbjct: 832 ATKKVLINKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFKEVIDLRQYMDSRCSGEDPPVY 891
Query: 376 NLYAVVVHLDIMNAAFSGHYVCYVKNIQ---------GEWFRTDDSRVEPVEFSRVLSER 426
L +V H M GHYV YV+ Q W+ D+ V V +VL
Sbjct: 892 RLAGLVEHSGTMRG---GHYVAYVRGGQRVKETDSSSTAWYNVSDAYVRQVSLEKVLHSE 948
Query: 427 AYMLLYAR 434
AY+L Y R
Sbjct: 949 AYILFYER 956
>AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 234 NRCAVDTMQSICLKEAGVSSPLTEETTLIGYTFGGYLRS--KIKCLKCLGKSERYERMMD 291
N+ AV QS V S L+E FGG L+S K K K + Y ++
Sbjct: 351 NKSAVTRTQSF------VPSELSE-------IFGGQLKSVVKAKGTKASATVQPY-LLLH 396
Query: 292 LTVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLK 351
L + DG G +E+AL F+A E L+ + + + A K + I + I+ + L
Sbjct: 397 LDIHPDGVQG-IEDALHLFSAQEDLE-GYRASVTGKTGVVSASKSIKIQKLSKIMILHLM 454
Query: 352 RF--------------QFPEVLNM-APYMSGTKDKYPFYNLYAVVVHLDIMNAAFSGHYV 396
RF +FP LN+ ++ ++ Y L A + H + GHY
Sbjct: 455 RFSYGSQGSTKLRKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPS--KGHYT 512
Query: 397 CYVKNIQGEWFRTDDSRVEPVEFSRVLSERAYMLLYAR 434
+ G+W R DD+ V P+ VL ++AY+L Y +
Sbjct: 513 TDARRKNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQ 550
>AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 234 NRCAVDTMQSICLKEAGVSSPLTEETTLIGYTFGGYLRS--KIKCLKCLGKSERYERMMD 291
N+ AV QS V S L+E FGG L+S K K K + Y ++
Sbjct: 351 NKSAVTRTQSF------VPSELSE-------IFGGQLKSVVKAKGTKASATVQPY-LLLH 396
Query: 292 LTVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLK 351
L + DG G +E+AL F+A E L+ + + + A K + I + I+ + L
Sbjct: 397 LDIHPDGVQG-IEDALHLFSAQEDLE-GYRASVTGKTGVVSASKSIKIQKLSKIMILHLM 454
Query: 352 RF--------------QFPEVLNM-APYMSGTKDKYPFYNLYAVVVHLDIMNAAFSGHYV 396
RF +FP LN+ ++ ++ Y L A + H + GHY
Sbjct: 455 RFSYGSQGSTKLRKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPS--KGHYT 512
Query: 397 CYVKNIQGEWFRTDDSRVEPVEFSRVLSERAYMLLYAR 434
+ G+W R DD+ V P+ VL ++AY+L Y +
Sbjct: 513 TDARRKNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQ 550
>AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 234 NRCAVDTMQSICLKEAGVSSPLTEETTLIGYTFGGYLRS--KIKCLKCLGKSERYERMMD 291
N+ AV QS V S L+E FGG L+S K K K + Y ++
Sbjct: 351 NKSAVTRTQSF------VPSELSE-------IFGGQLKSVVKAKGTKASATVQPY-LLLH 396
Query: 292 LTVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLK 351
L + DG G +E+AL F+A E L+ + + + A K + I + I+ + L
Sbjct: 397 LDIHPDGVQG-IEDALHLFSAQEDLE-GYRASVTGKTGVVSASKSIKIQKLSKIMILHLM 454
Query: 352 RF--------------QFPEVLNM-APYMSGTKDKYPFYNLYAVVVHLDIMNAAFSGHYV 396
RF +FP LN+ ++ ++ Y L A + H + GHY
Sbjct: 455 RFSYGSQGSTKLRKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPS--KGHYT 512
Query: 397 CYVKNIQGEWFRTDDSRVEPVEFSRVLSERAYMLLYAR 434
+ G+W R DD+ V P+ VL ++AY+L Y +
Sbjct: 513 TDARRKNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQ 550