Miyakogusa Predicted Gene

Lj2g3v1438400.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1438400.1 tr|G7JXS6|G7JXS6_MEDTR BTB/POZ domain-containing
protein OS=Medicago truncatula GN=MTR_5g032780 PE=4,87.21,0,seg,NULL;
POZ domain,BTB/POZ fold; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; no description,B,CUFF.37089.1
         (634 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67900.3 | Symbols:  | Phototropic-responsive NPH3 family pro...   800   0.0  
AT1G67900.2 | Symbols:  | Phototropic-responsive NPH3 family pro...   800   0.0  
AT1G67900.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   800   0.0  
AT3G26490.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   536   e-152
AT2G14820.1 | Symbols: NPY2 | Phototropic-responsive NPH3 family...   435   e-122
AT5G47800.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   413   e-115
AT4G37590.1 | Symbols: NPY5 | Phototropic-responsive NPH3 family...   396   e-110
AT5G67440.1 | Symbols: NPY3 | Phototropic-responsive NPH3 family...   393   e-109
AT4G31820.1 | Symbols: ENP, NPY1, MAB4 | Phototropic-responsive ...   382   e-106
AT2G23050.1 | Symbols: NPY4 | Phototropic-responsive NPH3 family...   363   e-100
AT5G67440.2 | Symbols: NPY3 | Phototropic-responsive NPH3 family...   353   2e-97
AT5G64330.1 | Symbols: NPH3, RPT3, JK218 | Phototropic-responsiv...   343   2e-94
AT5G03250.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   331   9e-91
AT1G30440.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   322   6e-88
AT5G67385.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   314   1e-85
AT5G13600.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   309   3e-84
AT5G48800.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   286   4e-77
AT5G66560.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   277   2e-74
AT3G44820.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   276   4e-74
AT5G10250.1 | Symbols: DOT3 | Phototropic-responsive NPH3 family...   275   7e-74
AT1G03010.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   274   1e-73
AT3G08570.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   269   4e-72
AT5G64330.2 | Symbols: NPH3, RPT3, JK218 | Phototropic-responsiv...   263   3e-70
AT3G08660.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   262   5e-70
AT3G49970.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   261   9e-70
AT2G47860.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   257   2e-68
AT2G30520.1 | Symbols: RPT2 | Phototropic-responsive NPH3 family...   253   3e-67
AT3G50840.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   248   1e-65
AT2G47860.3 | Symbols:  | Phototropic-responsive NPH3 family pro...   244   2e-64
AT2G30520.3 | Symbols: RPT2 | Phototropic-responsive NPH3 family...   236   3e-62
AT2G30520.2 | Symbols: RPT2 | Phototropic-responsive NPH3 family...   236   3e-62
AT1G52770.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   200   3e-51
AT3G15570.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   192   5e-49
AT2G47860.2 | Symbols:  | Phototropic-responsive NPH3 family pro...   176   5e-44
AT3G19850.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   161   2e-39
AT3G03510.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   150   3e-36
AT1G50280.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   137   3e-32
AT5G17580.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   134   2e-31
AT3G22104.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   131   2e-30
AT5G48130.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   104   2e-22
AT3G49900.1 | Symbols:  | Phototropic-responsive NPH3 family pro...    60   6e-09
AT3G49900.2 | Symbols:  | Phototropic-responsive NPH3 family pro...    55   1e-07

>AT1G67900.3 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:25467737-25469888 FORWARD LENGTH=631
          Length = 631

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/636 (68%), Positives = 502/636 (78%), Gaps = 21/636 (3%)

Query: 1   MKFMKLGSRPDTFYTAEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSES 60
           MKFMKLGSRPDTFYT+E +R VSSEV SD  I+V G+RYLLHKFPLLSKCLRLQ++CSES
Sbjct: 1   MKFMKLGSRPDTFYTSEDLRCVSSEVSSDFTIEVSGSRYLLHKFPLLSKCLRLQRMCSES 60

Query: 61  PDSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGN 120
           P+S    I+QLP+FPGG+EAFELCAKFCYGITIT+S YNIVAARC+AEYLQM+EEVEKGN
Sbjct: 61  PES----IIQLPEFPGGVEAFELCAKFCYGITITISAYNIVAARCAAEYLQMSEEVEKGN 116

Query: 121 LIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXXX 180
           L+ KL+VFFNSCIL GW+DSIV+LQTTKA  LWSEDL ITSRCIEAIASKVLSHP+K   
Sbjct: 117 LVYKLEVFFNSCILNGWRDSIVTLQTTKAFPLWSEDLAITSRCIEAIASKVLSHPSKVSL 176

Query: 181 XXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLI 240
                          N   +    S++GWW ED+AEL IDLYWRTMIAIKSGGKVP++LI
Sbjct: 177 SHSHSRRVRDDDMSSNRAAA----SSRGWWAEDIAELGIDLYWRTMIAIKSGGKVPASLI 232

Query: 241 GDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLESIVSLLPAEKGA 300
           GDAL++YAS+WLP + +N  V +K+   ++SD DS ++ +SKHRLLLESI+SLLPAEKGA
Sbjct: 233 GDALRVYASKWLPTLQRNRKVVKKK---EDSDSDSDTDTSSKHRLLLESIISLLPAEKGA 289

Query: 301 VSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVELV 360
           VSCSFLLKLLKA+NILNAS+SSKMELA RV LQLEEAT +DLLIP +SY ++ LYDV++V
Sbjct: 290 VSCSFLLKLLKAANILNASTSSKMELARRVALQLEEATVSDLLIPPMSYKSELLYDVDIV 349

Query: 361 MTILEQFMARGQ-SPPTSPPRSL--MTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXX 417
            TILEQFM +GQ SPPTSP R    M   RRRSRSAENI+ EFQE               
Sbjct: 350 ATILEQFMVQGQTSPPTSPLRGKKGMMDRRRRSRSAENIDLEFQESRRSSSASHSSKLKV 409

Query: 418 XXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERK 477
               D YLQ+IARDV   LSKF++LAE +P+F+R DHDDLYRAIDIYLKAH  LNKSERK
Sbjct: 410 AKLVDGYLQQIARDVNLPLSKFVTLAESVPEFSRLDHDDLYRAIDIYLKAHKNLNKSERK 469

Query: 478 RLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAAT--NGDK-VSDLPSNIK 534
           R+CR+LDCKKLSMEACMHAAQNE+LPLRVVVQVLF+EQARAAA   NG+K  ++LPSNIK
Sbjct: 470 RVCRVLDCKKLSMEACMHAAQNEMLPLRVVVQVLFYEQARAAAATNNGEKNTTELPSNIK 529

Query: 535 TLLTAHGIDPSK-HTAPLSTTTSINA-EDNWSVSGFKSPKSR-SSTLRMKLAEDHDDLDE 591
            LL AH IDPS  + A  STTTSI A ED WSVSG KSPKS+ S TLR KLAED +++DE
Sbjct: 530 ALLAAHNIDPSNPNAAAFSTTTSIAAPEDRWSVSGLKSPKSKLSGTLRSKLAED-EEVDE 588

Query: 592 NGLANDVIGRNSRFRGICALPTQPKKMFSKLWSANR 627
             +  D     SRF+  CA+P +PKKMFSKL S NR
Sbjct: 589 RFMNGDGGRTPSRFKAFCAIPGRPKKMFSKLLSINR 624


>AT1G67900.2 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:25467737-25469888 FORWARD LENGTH=631
          Length = 631

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/636 (68%), Positives = 502/636 (78%), Gaps = 21/636 (3%)

Query: 1   MKFMKLGSRPDTFYTAEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSES 60
           MKFMKLGSRPDTFYT+E +R VSSEV SD  I+V G+RYLLHKFPLLSKCLRLQ++CSES
Sbjct: 1   MKFMKLGSRPDTFYTSEDLRCVSSEVSSDFTIEVSGSRYLLHKFPLLSKCLRLQRMCSES 60

Query: 61  PDSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGN 120
           P+S    I+QLP+FPGG+EAFELCAKFCYGITIT+S YNIVAARC+AEYLQM+EEVEKGN
Sbjct: 61  PES----IIQLPEFPGGVEAFELCAKFCYGITITISAYNIVAARCAAEYLQMSEEVEKGN 116

Query: 121 LIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXXX 180
           L+ KL+VFFNSCIL GW+DSIV+LQTTKA  LWSEDL ITSRCIEAIASKVLSHP+K   
Sbjct: 117 LVYKLEVFFNSCILNGWRDSIVTLQTTKAFPLWSEDLAITSRCIEAIASKVLSHPSKVSL 176

Query: 181 XXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLI 240
                          N   +    S++GWW ED+AEL IDLYWRTMIAIKSGGKVP++LI
Sbjct: 177 SHSHSRRVRDDDMSSNRAAA----SSRGWWAEDIAELGIDLYWRTMIAIKSGGKVPASLI 232

Query: 241 GDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLESIVSLLPAEKGA 300
           GDAL++YAS+WLP + +N  V +K+   ++SD DS ++ +SKHRLLLESI+SLLPAEKGA
Sbjct: 233 GDALRVYASKWLPTLQRNRKVVKKK---EDSDSDSDTDTSSKHRLLLESIISLLPAEKGA 289

Query: 301 VSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVELV 360
           VSCSFLLKLLKA+NILNAS+SSKMELA RV LQLEEAT +DLLIP +SY ++ LYDV++V
Sbjct: 290 VSCSFLLKLLKAANILNASTSSKMELARRVALQLEEATVSDLLIPPMSYKSELLYDVDIV 349

Query: 361 MTILEQFMARGQ-SPPTSPPRSL--MTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXX 417
            TILEQFM +GQ SPPTSP R    M   RRRSRSAENI+ EFQE               
Sbjct: 350 ATILEQFMVQGQTSPPTSPLRGKKGMMDRRRRSRSAENIDLEFQESRRSSSASHSSKLKV 409

Query: 418 XXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERK 477
               D YLQ+IARDV   LSKF++LAE +P+F+R DHDDLYRAIDIYLKAH  LNKSERK
Sbjct: 410 AKLVDGYLQQIARDVNLPLSKFVTLAESVPEFSRLDHDDLYRAIDIYLKAHKNLNKSERK 469

Query: 478 RLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAAT--NGDK-VSDLPSNIK 534
           R+CR+LDCKKLSMEACMHAAQNE+LPLRVVVQVLF+EQARAAA   NG+K  ++LPSNIK
Sbjct: 470 RVCRVLDCKKLSMEACMHAAQNEMLPLRVVVQVLFYEQARAAAATNNGEKNTTELPSNIK 529

Query: 535 TLLTAHGIDPSK-HTAPLSTTTSINA-EDNWSVSGFKSPKSR-SSTLRMKLAEDHDDLDE 591
            LL AH IDPS  + A  STTTSI A ED WSVSG KSPKS+ S TLR KLAED +++DE
Sbjct: 530 ALLAAHNIDPSNPNAAAFSTTTSIAAPEDRWSVSGLKSPKSKLSGTLRSKLAED-EEVDE 588

Query: 592 NGLANDVIGRNSRFRGICALPTQPKKMFSKLWSANR 627
             +  D     SRF+  CA+P +PKKMFSKL S NR
Sbjct: 589 RFMNGDGGRTPSRFKAFCAIPGRPKKMFSKLLSINR 624


>AT1G67900.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:25467737-25469888 FORWARD LENGTH=631
          Length = 631

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/636 (68%), Positives = 502/636 (78%), Gaps = 21/636 (3%)

Query: 1   MKFMKLGSRPDTFYTAEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSES 60
           MKFMKLGSRPDTFYT+E +R VSSEV SD  I+V G+RYLLHKFPLLSKCLRLQ++CSES
Sbjct: 1   MKFMKLGSRPDTFYTSEDLRCVSSEVSSDFTIEVSGSRYLLHKFPLLSKCLRLQRMCSES 60

Query: 61  PDSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGN 120
           P+S    I+QLP+FPGG+EAFELCAKFCYGITIT+S YNIVAARC+AEYLQM+EEVEKGN
Sbjct: 61  PES----IIQLPEFPGGVEAFELCAKFCYGITITISAYNIVAARCAAEYLQMSEEVEKGN 116

Query: 121 LIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXXX 180
           L+ KL+VFFNSCIL GW+DSIV+LQTTKA  LWSEDL ITSRCIEAIASKVLSHP+K   
Sbjct: 117 LVYKLEVFFNSCILNGWRDSIVTLQTTKAFPLWSEDLAITSRCIEAIASKVLSHPSKVSL 176

Query: 181 XXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLI 240
                          N   +    S++GWW ED+AEL IDLYWRTMIAIKSGGKVP++LI
Sbjct: 177 SHSHSRRVRDDDMSSNRAAA----SSRGWWAEDIAELGIDLYWRTMIAIKSGGKVPASLI 232

Query: 241 GDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLESIVSLLPAEKGA 300
           GDAL++YAS+WLP + +N  V +K+   ++SD DS ++ +SKHRLLLESI+SLLPAEKGA
Sbjct: 233 GDALRVYASKWLPTLQRNRKVVKKK---EDSDSDSDTDTSSKHRLLLESIISLLPAEKGA 289

Query: 301 VSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVELV 360
           VSCSFLLKLLKA+NILNAS+SSKMELA RV LQLEEAT +DLLIP +SY ++ LYDV++V
Sbjct: 290 VSCSFLLKLLKAANILNASTSSKMELARRVALQLEEATVSDLLIPPMSYKSELLYDVDIV 349

Query: 361 MTILEQFMARGQ-SPPTSPPRSL--MTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXX 417
            TILEQFM +GQ SPPTSP R    M   RRRSRSAENI+ EFQE               
Sbjct: 350 ATILEQFMVQGQTSPPTSPLRGKKGMMDRRRRSRSAENIDLEFQESRRSSSASHSSKLKV 409

Query: 418 XXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERK 477
               D YLQ+IARDV   LSKF++LAE +P+F+R DHDDLYRAIDIYLKAH  LNKSERK
Sbjct: 410 AKLVDGYLQQIARDVNLPLSKFVTLAESVPEFSRLDHDDLYRAIDIYLKAHKNLNKSERK 469

Query: 478 RLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAAT--NGDK-VSDLPSNIK 534
           R+CR+LDCKKLSMEACMHAAQNE+LPLRVVVQVLF+EQARAAA   NG+K  ++LPSNIK
Sbjct: 470 RVCRVLDCKKLSMEACMHAAQNEMLPLRVVVQVLFYEQARAAAATNNGEKNTTELPSNIK 529

Query: 535 TLLTAHGIDPSK-HTAPLSTTTSINA-EDNWSVSGFKSPKSR-SSTLRMKLAEDHDDLDE 591
            LL AH IDPS  + A  STTTSI A ED WSVSG KSPKS+ S TLR KLAED +++DE
Sbjct: 530 ALLAAHNIDPSNPNAAAFSTTTSIAAPEDRWSVSGLKSPKSKLSGTLRSKLAED-EEVDE 588

Query: 592 NGLANDVIGRNSRFRGICALPTQPKKMFSKLWSANR 627
             +  D     SRF+  CA+P +PKKMFSKL S NR
Sbjct: 589 RFMNGDGGRTPSRFKAFCAIPGRPKKMFSKLLSINR 624


>AT3G26490.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:9704142-9706161 FORWARD LENGTH=588
          Length = 588

 Score =  536 bits (1380), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 312/646 (48%), Positives = 395/646 (61%), Gaps = 81/646 (12%)

Query: 1   MKFMKLGSRPDTFYTAEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCS-- 58
           MKFM+LG RPDTFYT E++RSVSS++ +DL+IQV+ T+YLLHKFP+LSKCLRL+ L S  
Sbjct: 1   MKFMELGFRPDTFYTVESVRSVSSDLLNDLVIQVKSTKYLLHKFPMLSKCLRLKNLVSSQ 60

Query: 59  ESPDSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEK 118
           E+  S   Q++QL DFPG  EAFELCAKFCYGITITL  +N+VA RC+AEYL MTEEVE 
Sbjct: 61  ETETSQEQQVIQLVDFPGETEAFELCAKFCYGITITLCAHNVVAVRCAAEYLGMTEEVEL 120

Query: 119 G---NLIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKVLSHP 175
           G   NL+Q+L++F  +C+ + W+DS V+LQTTK L LWSEDL IT+RCIEAIA+ V   P
Sbjct: 121 GETENLVQRLELFLTTCVFKSWRDSYVTLQTTKVLPLWSEDLGITNRCIEAIANGVTVSP 180

Query: 176 TKXXXXXXXX------XXXXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRTMIAI 229
            +                       CN     + +S + WWGEDLAEL +DLY RTM+AI
Sbjct: 181 GEDFSTQLETGLLRNRSRIRRDEILCNGGGGSKAESLR-WWGEDLAELGLDLYRRTMVAI 239

Query: 230 KSGG-KVPSNLIGDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLE 288
           KS   K+   LIG+AL+IYAS+WLP+I         Q +S +S+L            +LE
Sbjct: 240 KSSHRKISPRLIGNALRIYASKWLPSI---------QESSADSNL------------VLE 278

Query: 289 SIVSLLPAEKGAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLS 348
           S++SLLP EK +V CSFLL+LLK +N++N S SSKMELA + G QL++AT ++LLIP LS
Sbjct: 279 SVISLLPEEKSSVPCSFLLQLLKMANVMNVSHSSKMELAIKAGNQLDKATVSELLIP-LS 337

Query: 349 YTNDTLYDVELVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFE-FQEX---X 404
             +  LYDV++V  +++QF++   SP   P R+    E RRSRS ENIN E  QE     
Sbjct: 338 DKSGMLYDVDVVKMMVKQFLSH-ISPEIRPTRT--RTEHRRSRSEENINLEEIQEVRGSL 394

Query: 405 XXXXXXXXXXXXXXXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIY 464
                            D YLQEIARDV  ++SKF+ LAE IPD +R  HDDLY AID+Y
Sbjct: 395 STSSSPPPLLSKVAKLVDSYLQEIARDVNLTVSKFVELAETIPDTSRICHDDLYNAIDVY 454

Query: 465 LKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAATNGD 524
           L+ H ++ K ERKRLCRILDCKKLS+EA   AAQNELLPLRV+VQ+LF EQARA      
Sbjct: 455 LQVHKKIEKCERKRLCRILDCKKLSVEASKKAAQNELLPLRVIVQILFVEQARA------ 508

Query: 525 KVSDLPSNIKTLLTAHGIDPSKHTAPL--STTTSINAEDNWSVSGFKSPKSRSSTLRMKL 582
                     TL T      +  TA L  S TT             ++  S         
Sbjct: 509 ----------TLATTRNNITTNETAVLKRSFTTRREEGGQEEEERDETKPS--------- 549

Query: 583 AEDHDDLDENGLANDVIGRNSRFRGICALPTQPKKMFSKLWSANRA 628
                     G       R   F  +CA+P QPKK+  KL S +R+
Sbjct: 550 ---------GGFLQSTPSR---FMALCAIPRQPKKLLCKLLSISRS 583


>AT2G14820.1 | Symbols: NPY2 | Phototropic-responsive NPH3 family
           protein | chr2:6358864-6361300 FORWARD LENGTH=634
          Length = 634

 Score =  435 bits (1118), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 255/602 (42%), Positives = 337/602 (55%), Gaps = 47/602 (7%)

Query: 1   MKFMKLGSRPDTFYT-AEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSE 59
           MKFMK+GS+ D+F T    +R V +E+ SD+ + V G+R+ LHKFPLLSKC  LQKL S 
Sbjct: 1   MKFMKIGSKLDSFKTDGNNVRYVENELASDISVDVEGSRFCLHKFPLLSKCACLQKLLS- 59

Query: 60  SPDSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKG 119
           S D +    + +   PGG  AFE CAKFCYG+T+TLS YN+VA RC+AEYL M E VEKG
Sbjct: 60  STDKNNIDDIDISGIPGGPTAFETCAKFCYGMTVTLSAYNVVATRCAAEYLGMHETVEKG 119

Query: 120 NLIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKV---LSHPT 176
           NLI K+DVF +S + R WKDSI+ LQTTK     SEDL++ S CI+AIA+K    +SH  
Sbjct: 120 NLIYKIDVFLSSSLFRSWKDSIIVLQTTKPFLPLSEDLKLVSLCIDAIATKACVDVSHVE 179

Query: 177 KXXXXXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVP 236
                               +   V H     WW EDL EL ID Y R ++ IK+   + 
Sbjct: 180 WSYTYNKKKLAEENNGADSIKARDVPHD----WWVEDLCELEIDYYKRVIMNIKTKCILG 235

Query: 237 SNLIGDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLESIVSLLPA 296
             +IG+ALK Y  R L    K           +  DL        KH+ ++E++V LLPA
Sbjct: 236 GEVIGEALKAYGYRRLSGFNKG--------VMEQGDL-------VKHKTIIETLVWLLPA 280

Query: 297 EKGAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYD 356
           EK +VSC FLLKLLKA  ++N+    K +L  R+G QLEEA+  +LLI S    ++TLYD
Sbjct: 281 EKNSVSCGFLLKLLKAVTMVNSGEVVKEQLVRRIGQQLEEASMAELLIKS-HQGSETLYD 339

Query: 357 VELVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXX 416
           V+LV  I+ +FM R ++           FE +  R    I  E                 
Sbjct: 340 VDLVQKIVMEFMRRDKNSEIEVQDDEDGFEVQEVRKLPGILSE------------ASKLM 387

Query: 417 XXXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSER 476
                D YL EIA+D     SKFI +AE +    R  HD LYRAID++LK HP + K E+
Sbjct: 388 VAKVIDSYLTEIAKDPNLPASKFIDVAESVTSIPRPAHDALYRAIDMFLKEHPGITKGEK 447

Query: 477 KRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAATNGDKVSDLPSNIKTL 536
           KR+C+++DC+KLS+EACMHA QN+ LPLRVVVQVLFFEQ RAAA++G    DLP  +   
Sbjct: 448 KRMCKLMDCRKLSVEACMHAVQNDRLPLRVVVQVLFFEQVRAAASSGSSTPDLPRGMGRE 507

Query: 537 LTAHGIDPSKHTAPLSTTTSINAEDNWSVSG----FKSPKSRSSTLRMKLAEDHDDLDEN 592
           L + G   S  + P         ED W         ++ KS  + L+++       +D  
Sbjct: 508 LRSCGTYGSSRSVPTVM------EDEWEAVATEEEMRALKSEIAALKLQEESGRKSMDRA 561

Query: 593 GL 594
           G+
Sbjct: 562 GV 563


>AT5G47800.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:19354171-19356126 FORWARD LENGTH=559
          Length = 559

 Score =  413 bits (1062), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/580 (39%), Positives = 341/580 (58%), Gaps = 46/580 (7%)

Query: 1   MKFMKLGSRPDTFYTAEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSES 60
           MKFMK+G++PDTFYT EA R + ++  +DL+I++  T Y LH+  L+ KC  L++LC++ 
Sbjct: 1   MKFMKIGTKPDTFYTQEASRILITDTPNDLVIRINNTTYHLHRSCLVPKCGLLRRLCTDL 60

Query: 61  PDSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGN 120
            +S     ++L D PGG +AFELCAKFCY ITI LS +N+V A C++++L+M++ V+KGN
Sbjct: 61  EESDT-VTIELNDIPGGADAFELCAKFCYDITINLSAHNLVNALCASKFLRMSDSVDKGN 119

Query: 121 LIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXXX 180
           L+ KL+ FF+SCIL+GWKDSIV+LQ+T  L  W E+L I  +CI++I  K+L+ PT    
Sbjct: 120 LLPKLEAFFHSCILQGWKDSIVTLQSTTKLPEWCENLGIVRKCIDSIVEKILT-PTSEVS 178

Query: 181 XXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLI 240
                             +   H   + WW ED+++L +DL+   + A +S   +P  LI
Sbjct: 179 WSHTYTRP-------GYAKRQHHSVPRDWWTEDISDLDLDLFRCVITAARSTFTLPPQLI 231

Query: 241 GDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLESIVSLLPAEKGA 300
           G+AL +Y  RWLP    N H     V  + + L+       +HR L+ ++V+++PA+KG+
Sbjct: 232 GEALHVYTCRWLPYFKSNSHSGF-SVKENEAALE-------RHRRLVNTVVNMIPADKGS 283

Query: 301 VSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVELV 360
           VS  FLL+L+  ++ + AS ++K EL  +  LQLEEAT  DLL+PS S ++   YD +LV
Sbjct: 284 VSEGFLLRLVSIASYVRASLTTKTELIRKSSLQLEEATLEDLLLPSHSSSHLHRYDTDLV 343

Query: 361 MTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXXXX 420
            T+LE F              LM + R+ S    + N +                     
Sbjct: 344 ATVLESF--------------LMLWRRQSSAHLSSNNTQL----------LHSIRKVAKL 379

Query: 421 XDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERKRLC 480
            D YLQ +A+DV   +SKF+SL+E +PD ARQ HD LY+AI+I+LK HPE++K E+KRLC
Sbjct: 380 IDSYLQAVAQDVHMPVSKFVSLSEAVPDIARQSHDRLYKAINIFLKVHPEISKEEKKRLC 439

Query: 481 RILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQ---ARAAATNGDKVSDLPSNIKTLL 537
           R LDC+KLS +   HA +NE +PLR VVQ LFF+Q   ++ A++  +         +T  
Sbjct: 440 RSLDCQKLSAQVRAHAVKNERMPLRTVVQALFFDQESGSKGASSRSESQELFTRGKETPT 499

Query: 538 TAHGIDPSKHTAPLSTTTSINAEDNWSVSGFKSPKSRSST 577
             H +    H  P ST  + N  +     G    K+RSST
Sbjct: 500 DEHSMMHKLHLGPASTGKAKNVLEEGCKRG--EEKTRSST 537


>AT4G37590.1 | Symbols: NPY5 | Phototropic-responsive NPH3 family
           protein | chr4:17663080-17665299 REVERSE LENGTH=580
          Length = 580

 Score =  396 bits (1017), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 225/530 (42%), Positives = 312/530 (58%), Gaps = 76/530 (14%)

Query: 1   MKFMKLGSRPDTFYT-AEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSE 59
           MKFMKLGS+PD+F +  + +R VSSE+ +D+I+ +   ++ LHKFPLLSK  RLQKL + 
Sbjct: 1   MKFMKLGSKPDSFQSEGDNVRYVSSELATDVIVIIGDVKFYLHKFPLLSKSARLQKLITT 60

Query: 60  SPDSSPHQ----------IVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEY 109
           S  SS  +           +++ + PGG  +FE+CAKFCYG+T+TL+ YN+VAARC+AE+
Sbjct: 61  STSSSNEENQIHHHHHEDEIEIAEIPGGPASFEICAKFCYGMTVTLNAYNVVAARCAAEF 120

Query: 110 LQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIAS 169
           L+M E VEKGNL+ K++VF NS IL+ WKDSI+ LQTT+AL  +SE+L++T RC+++IAS
Sbjct: 121 LEMYETVEKGNLVYKIEVFLNSSILQSWKDSIIVLQTTRALSPYSEELKLTGRCLDSIAS 180

Query: 170 KVLSHPTKXXXXXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRTMIAI 229
           +  S  T                    + ++V     + WW EDL +L IDLY R +  I
Sbjct: 181 RA-SIDTSKVEWSYTYSKKKNLDNGLRKPQAV----PRDWWVEDLCDLHIDLYKRALATI 235

Query: 230 KSGGKVPSNLIGDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLES 289
           ++ G V +++IG+AL  YA + +P  +K+  V     A              K+R L +S
Sbjct: 236 EARGNVSADVIGEALHAYAIKRIPGFSKSSSVQVTDFA--------------KYRALADS 281

Query: 290 IVSLLPAEKGAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSY 349
           I+ L+P EK +VS SFL KLL+AS  L     +   L  RVG +L+EA   D+L      
Sbjct: 282 IIELIPDEKRSVSSSFLTKLLRASIFLGCDEVAG--LKNRVGERLDEANLGDVL------ 333

Query: 350 TNDTLYDVELVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXX 409
               LYDVEL+ +++E F+       +  PR                             
Sbjct: 334 ----LYDVELMQSLVEVFL------KSRDPRE---------------------------D 356

Query: 410 XXXXXXXXXXXXDRYLQEIARDV-TFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAH 468
                       D YL E +RD     L KF+SLAE++  F RQ HD +YRAID++LK H
Sbjct: 357 DVTAKASVAKLVDGYLAEKSRDSDNLPLQKFLSLAEMVSSFPRQSHDGVYRAIDMFLKEH 416

Query: 469 PELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARA 518
           PE+NKSE+KR+CR++DC+KLS EAC HA QNE LP+RVVVQVLFFEQ RA
Sbjct: 417 PEMNKSEKKRICRLMDCRKLSAEACAHAVQNERLPMRVVVQVLFFEQVRA 466


>AT5G67440.1 | Symbols: NPY3 | Phototropic-responsive NPH3 family
           protein | chr5:26912947-26914906 REVERSE LENGTH=579
          Length = 579

 Score =  393 bits (1009), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 218/522 (41%), Positives = 315/522 (60%), Gaps = 49/522 (9%)

Query: 1   MKFMKLGSRPDTFYTAE-AIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKL--C 57
           MKFMKLGS+PD+F + E  +R V++E+ +D+++ V   ++ LHKFPLLSK  RLQKL   
Sbjct: 1   MKFMKLGSKPDSFQSDEDCVRYVATELATDVVVIVGDVKFHLHKFPLLSKSARLQKLIAT 60

Query: 58  SESPDSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVE 117
           + + + S    +++PD PGG  AFE+CAKFCYG+ +TL+ YN+VA RC+AEYL+M E +E
Sbjct: 61  TTTDEQSDDDEIRIPDIPGGPPAFEICAKFCYGMAVTLNAYNVVAVRCAAEYLEMYESIE 120

Query: 118 KGNLIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKVLSHPTK 177
            GNL+ K++VF NS +LR WKDSI+ LQTT++ + WSED+++  RC+E+IA K    P +
Sbjct: 121 NGNLVYKMEVFLNSSVLRSWKDSIIVLQTTRSFYPWSEDVKLDVRCLESIALKAAMDPAR 180

Query: 178 XXXXXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVPS 237
                             N      +   + WW EDLAELSIDL+ R +  I+  G V  
Sbjct: 181 VDWSYTYNRRKLLPPEMNN------NSVPRDWWVEDLAELSIDLFKRVVSTIRRKGGVLP 234

Query: 238 NLIGDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLESIVSLLPAE 297
            +IG+AL++YA++ +P        N               E   + R LLE++VS+LP+E
Sbjct: 235 EVIGEALEVYAAKRIPGFMIQNDDN------------DDEEDVMEQRSLLETLVSMLPSE 282

Query: 298 KGAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDV 357
           K +VSC FL+KLLK+S         + EL+ R+G +LEEA   DLLI +     +T+YD+
Sbjct: 283 KQSVSCGFLIKLLKSSVSFECGEEERKELSRRIGEKLEEANVGDLLIRA-PEGGETVYDI 341

Query: 358 ELVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXX 417
           ++V T++++F+ +             T +R     +++IN                    
Sbjct: 342 DIVETLIDEFVTQ-------------TEKRDELDCSDDIN-------------DSSKANV 375

Query: 418 XXXXDRYLQEIAR-DVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSER 476
               D YL EI+R +   S +KFI++AE +  F RQ HD +YRAID++LK HP + KSE+
Sbjct: 376 AKLIDGYLAEISRIETNLSTTKFITIAEKVSTFPRQSHDGVYRAIDMFLKQHPGITKSEK 435

Query: 477 KRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARA 518
           K   +++DC+KLS EAC HA QNE LPLRVVVQ+LFFEQ RA
Sbjct: 436 KSSSKLMDCRKLSPEACAHAVQNERLPLRVVVQILFFEQVRA 477


>AT4G31820.1 | Symbols: ENP, NPY1, MAB4 | Phototropic-responsive
           NPH3 family protein | chr4:15390788-15393627 REVERSE
           LENGTH=571
          Length = 571

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 217/524 (41%), Positives = 306/524 (58%), Gaps = 61/524 (11%)

Query: 1   MKFMKLGSRPDTFYT-AEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSE 59
           MKFMKLGS+PDTF +  + ++   S++ SD+ I V    + LHKFPLLSK  R+Q+L  E
Sbjct: 1   MKFMKLGSKPDTFESDGKFVKYAVSDLDSDVTIHVGEVTFHLHKFPLLSKSNRMQRLVFE 60

Query: 60  SPDSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKG 119
           + +    +I  L D PGG +AFE+CAKFCYG+T+TL+ YNI A RC+AEYL+MTE+ ++G
Sbjct: 61  ASEEKTDEITIL-DMPGGYKAFEICAKFCYGMTVTLNAYNITAVRCAAEYLEMTEDADRG 119

Query: 120 NLIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXX 179
           NLI K++VF NS I R WKDSI+ LQTT++L  WSEDL++  RCI+++++K+L +P    
Sbjct: 120 NLIYKIEVFLNSGIFRSWKDSIIVLQTTRSLLPWSEDLKLVGRCIDSVSAKILVNPETIT 179

Query: 180 XXXXXXXXXXXXXXXCNETESVRHKS--NKGWWGEDLAELSIDLYWRTMIAIKSGGKVPS 237
                                 R ++   K WW ED+ EL ID++ R +  +KS G++ +
Sbjct: 180 WSYTFNRKLSGPDKIVEYHREKREENVIPKDWWVEDVCELEIDMFKRVISVVKSSGRMNN 239

Query: 238 NLIGDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLESIVSLLPAE 297
            +I +AL+ Y +RWLP                   ++S +   S ++ L+E++V LLP  
Sbjct: 240 GVIAEALRYYVARWLPE-----------------SMESLTSEASSNKDLVETVVFLLPKV 282

Query: 298 KGAV---SCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTL 354
             A+   SCSFLLKLLK S ++ A  + + +L   V L+L EA+  DLLI          
Sbjct: 283 NRAMSYSSCSFLLKLLKVSILVGADETVREDLVENVSLKLHEASVKDLLI---------- 332

Query: 355 YDVELVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXX 414
           ++VELV  I++QFMA                E+R S       F                
Sbjct: 333 HEVELVHRIVDQFMAD---------------EKRVSEDDRYKEF---------VLGNGIL 368

Query: 415 XXXXXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKS 474
                  D YL   A +   +LS F+ L+E++P+ AR  HD LY+AID ++K HPEL KS
Sbjct: 369 LSVGRLIDAYL---ALNSELTLSSFVELSELVPESARPIHDGLYKAIDTFMKEHPELTKS 425

Query: 475 ERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARA 518
           E+KRLC ++D +KL+ EA  HAAQNE LPLRVVVQVL+FEQ RA
Sbjct: 426 EKKRLCGLMDVRKLTNEASTHAAQNERLPLRVVVQVLYFEQLRA 469


>AT2G23050.1 | Symbols: NPY4 | Phototropic-responsive NPH3 family
           protein | chr2:9810785-9812468 FORWARD LENGTH=481
          Length = 481

 Score =  363 bits (933), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 219/530 (41%), Positives = 300/530 (56%), Gaps = 83/530 (15%)

Query: 1   MKFMKLGSRPDTFYT-AEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQK--LC 57
           MKFMKLG++PD+F +  + +R V++E+ +++II +   ++ LHKFPLLSK   LQK    
Sbjct: 1   MKFMKLGTKPDSFLSKGDNVRYVTNELETEIIIIIGNVKFYLHKFPLLSKSGFLQKHIAT 60

Query: 58  SESPDSSPHQI--VQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEE 115
           S++ +   +QI  + + + PGG  AFE+C KFCYGIT+TL+ YN+VA RC+AE+L+M E 
Sbjct: 61  SKNEEEKKNQIDEIDISEIPGGSVAFEICVKFCYGITVTLNAYNVVAVRCAAEFLEMNET 120

Query: 116 VEKGNLIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKVLSHP 175
            EK NL+ K+DVF NS I R WKDSI+ LQTTK L L  +  E+  RC+ +IAS      
Sbjct: 121 FEKSNLVYKIDVFLNSTIFRSWKDSIIVLQTTKDL-LSDDSEELVKRCLGSIASTASIDT 179

Query: 176 TKXXXXXXXXXXXXXXXXXCNETESVRHKSN---KGWWGEDLAELSIDLYWRTMIAIKSG 232
           +K                   + E VR   +   K WW EDL EL IDLY + + AIK+ 
Sbjct: 180 SKVKWSYTYNRK--------KKLEKVRKPEDGVPKDWWVEDLCELHIDLYKQAIKAIKNR 231

Query: 233 GKVPSNLIGDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLESIVS 292
           GKVPSN+IG+AL  YA R +   +K                +S   I    R L+ +I+ 
Sbjct: 232 GKVPSNVIGEALHAYAIRRIAGFSK----------------ESMQLID---RSLINTIIE 272

Query: 293 LLPAEKGAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTND 352
           LLP EKG +S SFL KL +AS  L    + K +L  RV  QLEE T ND+L         
Sbjct: 273 LLPDEKGNISSSFLTKLHRASIFLGCEETVKEKLKKRVSEQLEETTVNDIL--------- 323

Query: 353 TLYDVELVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXX 412
            +YD+++V +++++FM R   P T    S+                              
Sbjct: 324 -MYDLDMVQSLVKEFMNR--DPKTHSKVSVAKL--------------------------- 353

Query: 413 XXXXXXXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELN 472
                    D YL E +RD    L  F+SLAE +  F R  HD LYRAID++LK H  ++
Sbjct: 354 --------IDGYLAEKSRDPNLPLQNFLSLAETLSSFPRHSHDVLYRAIDMFLKEHSGIS 405

Query: 473 KSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAATN 522
           KSE+KR+C ++DC+KLS EAC HA QNE LP+RV+VQVLFFEQ RA  ++
Sbjct: 406 KSEKKRVCGLMDCRKLSAEACEHAVQNERLPMRVIVQVLFFEQIRANGSS 455


>AT5G67440.2 | Symbols: NPY3 | Phototropic-responsive NPH3 family
           protein | chr5:26912947-26914646 REVERSE LENGTH=542
          Length = 542

 Score =  353 bits (905), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 199/481 (41%), Positives = 284/481 (59%), Gaps = 48/481 (9%)

Query: 41  LHKFPLLSKCLRLQKLCSESP--DSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPY 98
           L +FPLLSK  RLQKL + +   + S    +++PD PGG  AFE+CAKFCYG+ +TL+ Y
Sbjct: 5   LKQFPLLSKSARLQKLIATTTTDEQSDDDEIRIPDIPGGPPAFEICAKFCYGMAVTLNAY 64

Query: 99  NIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLE 158
           N+VA RC+AEYL+M E +E GNL+ K++VF NS +LR WKDSI+ LQTT++ + WSED++
Sbjct: 65  NVVAVRCAAEYLEMYESIENGNLVYKMEVFLNSSVLRSWKDSIIVLQTTRSFYPWSEDVK 124

Query: 159 ITSRCIEAIASKVLSHPTKXXXXXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAELS 218
           +  RC+E+IA K    P +                  N      +   + WW EDLAELS
Sbjct: 125 LDVRCLESIALKAAMDPARVDWSYTYNRRKLLPPEMNN------NSVPRDWWVEDLAELS 178

Query: 219 IDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASE 278
           IDL+ R +  I+  G V   +IG+AL++YA++ +P        N               E
Sbjct: 179 IDLFKRVVSTIRRKGGVLPEVIGEALEVYAAKRIPGFMIQNDDN------------DDEE 226

Query: 279 ITSKHRLLLESIVSLLPAEKGAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEAT 338
              + R LLE++VS+LP+EK +VSC FL+KLLK+S         + EL+ R+G +LEEA 
Sbjct: 227 DVMEQRSLLETLVSMLPSEKQSVSCGFLIKLLKSSVSFECGEEERKELSRRIGEKLEEAN 286

Query: 339 GNDLLIPSLSYTNDTLYDVELVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINF 398
             DLLI +     +T+YD+++V T++++F+ +             T +R     +++IN 
Sbjct: 287 VGDLLIRA-PEGGETVYDIDIVETLIDEFVTQ-------------TEKRDELDCSDDIN- 331

Query: 399 EFQEXXXXXXXXXXXXXXXXXXXDRYLQEIAR-DVTFSLSKFISLAEIIPDFARQDHDDL 457
                                  D YL EI+R +   S +KFI++AE +  F RQ HD +
Sbjct: 332 ------------DSSKANVAKLIDGYLAEISRIETNLSTTKFITIAEKVSTFPRQSHDGV 379

Query: 458 YRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQAR 517
           YRAID++LK HP + KSE+K   +++DC+KLS EAC HA QNE LPLRVVVQ+LFFEQ R
Sbjct: 380 YRAIDMFLKQHPGITKSEKKSSSKLMDCRKLSPEACAHAVQNERLPLRVVVQILFFEQVR 439

Query: 518 A 518
           A
Sbjct: 440 A 440


>AT5G64330.1 | Symbols: NPH3, RPT3, JK218 | Phototropic-responsive
           NPH3 family protein | chr5:25727568-25730225 FORWARD
           LENGTH=746
          Length = 746

 Score =  343 bits (881), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 210/577 (36%), Positives = 304/577 (52%), Gaps = 70/577 (12%)

Query: 7   GSRPDTFYTAEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSESPDSSPH 66
           G + D F        V++++ SDL++++    + LHK+PLLS+  ++ +L  ES D  P 
Sbjct: 33  GVKTDGFELRGQSWFVATDIPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYESRDPDP- 91

Query: 67  QIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLD 126
            I+ L D PGG EAFEL +KFCYG+ + L+  NI   RC+AEYL+MTE++E+GNLI K +
Sbjct: 92  TILILDDLPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIFKTE 151

Query: 127 VFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKVLSHP----------- 175
            F +  +L  W+DSI+ L++ + L  W+E+L+I  RC E+IA K  S+P           
Sbjct: 152 AFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKACSNPKGIRWAYTGKA 211

Query: 176 -----TKXXXXXXXXXXXXXXXXXCNETESVRHKS-NKGWWGEDLAELSIDLYWRTMIAI 229
                T                  C+ + +   +     WW ED++ L ID + R + AI
Sbjct: 212 PSPSTTNFAGSSPRWNESKDSSFYCSPSRNTNSQPVPPDWWFEDVSILRIDHFVRVITAI 271

Query: 230 KSGGKVPSNLIGDALKIYASRWLPNIT--------------------------------- 256
           K  G +   L+G  +  YA +WLP +                                  
Sbjct: 272 KVKG-MRFELLGAVIMHYAGKWLPGLIKEGGVAIAPAMSSAIGGGLGLGGDEMSISCGSN 330

Query: 257 ----------KNGHVNRKQVASDNSDLDSASEITS------KHRLLLESIVSLLPAEKGA 300
                     K G          N   DS + +          R+++ES++S++P +K +
Sbjct: 331 SSGGSSGPDWKGGLHMVLSAGKTNGHQDSVACLAGLGISPKDQRMIVESLISIIPPQKDS 390

Query: 301 VSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVELV 360
           V+CSFLL+LL+A+N+L  + +   EL  RVG+Q E+AT  DLLIP  +   +T+YDV+LV
Sbjct: 391 VTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQDLLIPGYNNKGETMYDVDLV 450

Query: 361 MTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXXXX 420
             +LE F+ + Q+  +S   S M+    +S  A+                          
Sbjct: 451 QRLLEHFLVQEQTEGSS--PSRMSPSPSQSMYADIPRGNNNNGGGGGGNNQNAKMRVARL 508

Query: 421 XDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERKRLC 480
            D YL E+ARD    L+KF  LAE +P+ AR   D LYRAID YLKAHP L++ ERKRLC
Sbjct: 509 VDSYLTEVARDRNLPLTKFQVLAEALPESARTCDDGLYRAIDSYLKAHPTLSEHERKRLC 568

Query: 481 RILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQAR 517
           R++DC+KLSM+ACMHAAQNE LPLRVVVQVLF EQ +
Sbjct: 569 RVMDCQKLSMDACMHAAQNERLPLRVVVQVLFSEQVK 605


>AT5G03250.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:774591-776855 FORWARD LENGTH=592
          Length = 592

 Score =  331 bits (849), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 190/527 (36%), Positives = 294/527 (55%), Gaps = 35/527 (6%)

Query: 1   MKFMKLGSRPDTFYTAEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSES 60
           M FM+LGS+ + F+        ++ + SD+ I+V   ++ LHKFPLLS+   L++L  ES
Sbjct: 1   MAFMRLGSKSEAFHREGQTWLCTTGLVSDVTIEVGDMKFHLHKFPLLSRSGLLERLIEES 60

Query: 61  P-DSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKG 119
             D     ++ L + PGG + FEL  KFCYG+ I L+ +N+V+ RC+AEYL+MT+   +G
Sbjct: 61  STDDGSGCVLSLDEIPGGGKTFELVTKFCYGVKIELTAFNVVSLRCAAEYLEMTDNYGEG 120

Query: 120 NLIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKVLSHPT--- 176
           NL+   + F N  +   W DSI +LQT + +  ++EDL I SRC++++A K  + P+   
Sbjct: 121 NLVGMTETFLNE-VFGNWTDSIKALQTCEEVIDYAEDLHIISRCVDSLAVKACADPSLFN 179

Query: 177 ------KXXXXXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRTMIAIK 230
                 K                  + +  +   + + WW +D + LS+ L+ R + AI+
Sbjct: 180 WPVGGGKNATSGQNTEDESHLWNGISASGKMLQHTGEDWWFDDASFLSLPLFKRLITAIE 239

Query: 231 SGGKVPSNLIGDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLESI 290
           + G    N I  A+  Y  + +P       +  +QV  D   +++ +      +  LE I
Sbjct: 240 ARGMKLEN-IAMAVMYYTRKHVP-------LMNRQVNMDEQVIETPNPSEEDQKTCLEEI 291

Query: 291 VSLLPAEKGAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYT 350
           V LLP++KG     FLL+LL+ + +L+AS SS+  L  R+G QL++A   DLLIP++ Y+
Sbjct: 292 VGLLPSKKGVNPTKFLLRLLQTAMVLHASQSSRENLERRIGNQLDQAALVDLLIPNMGYS 351

Query: 351 NDTLYDVELVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXX 410
            +TLYDVE V+ ++EQF++  +     P   ++         A+ +              
Sbjct: 352 -ETLYDVECVLRMIEQFVSSTEQAGIVPSPCIIEEGHLVKDGADLLT------------- 397

Query: 411 XXXXXXXXXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPE 470
                      D YL E+A DV   L+KF ++A  IPD+AR   D +Y AID+YLKAHP 
Sbjct: 398 --PTTLVATLVDGYLAEVAPDVNLKLAKFEAIAAAIPDYARPLDDGVYHAIDVYLKAHPW 455

Query: 471 LNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQAR 517
           +  SER+ +CR+++C+KLS+EA  HAAQNE LPLRV+VQVLFFEQ R
Sbjct: 456 ITDSEREHICRLMNCQKLSLEASTHAAQNERLPLRVIVQVLFFEQLR 502


>AT1G30440.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:10759475-10762199 FORWARD LENGTH=665
          Length = 665

 Score =  322 bits (824), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 193/526 (36%), Positives = 288/526 (54%), Gaps = 31/526 (5%)

Query: 1   MKFMKLGSRPDTFYTAEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSE- 59
           M  MKLGS+ D F         ++ + SD++++V    + LHKFPLLS+   +++  +E 
Sbjct: 1   MACMKLGSKSDAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVMERRIAEA 60

Query: 60  SPDSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKG 119
           S +     ++++ D PGG + FEL AKFCYG+ + L+  N+V  RC+AE+L+MTEE  +G
Sbjct: 61  SKEGDDKCLIEISDLPGGDKTFELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEEHGEG 120

Query: 120 NLIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASK------VLS 173
           NLI + + FFN  +L+ WKDSI +L +   +  ++++L IT +CIE++A +      +  
Sbjct: 121 NLISQTETFFNQVVLKSWKDSIKALHSCDEVLEYADELNITKKCIESLAMRASTDPNLFG 180

Query: 174 HPTKXXXXXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRTMIAIKSGG 233
            P                    +     +H S+  WW ED + LS  L+ R +  ++S G
Sbjct: 181 WPVVEHGGPMQSPGGSVLWNGISTGARPKHTSSD-WWYEDASMLSFPLFKRLITVMESRG 239

Query: 234 KVPSNLIGDALKIYASRWLPNIT--KNGHVNRKQVASDNSDLDSASEITSKHRLLLESIV 291
            +  ++I  +L  Y  + LP +   + G  +  + ++     +  SE   K+  LLE I 
Sbjct: 240 -IREDIIAGSLTYYTRKHLPGLKRRRGGPESSGRFSTPLGSGNVLSEEEQKN--LLEEIQ 296

Query: 292 SLLPAEKGAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTN 351
            LL  +KG V   F + +L+ + IL AS      L  R+G+QL++A   DL++PS S+T 
Sbjct: 297 ELLRMQKGLVPTKFFVDMLRIAKILKASPDCIANLEKRIGMQLDQAALEDLVMPSFSHTM 356

Query: 352 DTLYDVELVMTILEQFMARGQSPP--TSPPRSLMTFERRRSRSAENINFEFQEXXXXXXX 409
           +TLYDV+ V  IL+ F+   Q  P     P S          S ++ N            
Sbjct: 357 ETLYDVDSVQRILDHFLGTDQIMPGGVGSPCS----------SVDDGNL------IGSPQ 400

Query: 410 XXXXXXXXXXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHP 469
                       D YL E+A DV   L KF +LA  IP++AR   D LYRAIDIYLK HP
Sbjct: 401 SITPMTAVAKLIDGYLAEVAPDVNLKLPKFQALAASIPEYARLLDDGLYRAIDIYLKHHP 460

Query: 470 ELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQ 515
            L ++ER+ LCR+LDC+KLS+EAC HAAQNE LPLR++VQVLFFEQ
Sbjct: 461 WLAETERENLCRLLDCQKLSLEACTHAAQNERLPLRIIVQVLFFEQ 506


>AT5G67385.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:26884754-26887083 FORWARD LENGTH=604
          Length = 604

 Score =  314 bits (805), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 189/500 (37%), Positives = 269/500 (53%), Gaps = 52/500 (10%)

Query: 23  SSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSESPDSSPHQIVQLPDFPGGIEAFE 82
           S EV SD+ + V    + LHKFPL+SKC  ++KL SES   S   ++++PD PGG EAFE
Sbjct: 22  SQEVSSDVTVHVGEASFSLHKFPLMSKCGFIKKLVSESSKDSDSTVIKIPDIPGGSEAFE 81

Query: 83  LCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIV 142
           L AKFCYGI   +S  NI   RC+AEYL+MTEE    NL+ + + + N   L+    SI 
Sbjct: 82  LAAKFCYGINFDMSTENIAMLRCAAEYLEMTEEHSVENLVVRAEAYLNEVALKSLSSSIT 141

Query: 143 SLQTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXXXXXXXXXXXXXXXXXCNETESVR 202
            L  ++ L   +E +++ SRCI+AIA                              E V 
Sbjct: 142 VLHKSEKLLPIAERVKLVSRCIDAIAYMTCQE----------SHFCSPSSSNSGNNEVVV 191

Query: 203 HKSNK----GWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNITKN 258
            + +K     WW EDL  L ID + R +IA+ + G     L G  L +YA + L  +   
Sbjct: 192 QQQSKQPVVDWWAEDLTVLRIDSFQRVLIAMMARGFKQYGL-GPVLMLYAQKSLRGLEIF 250

Query: 259 GHVNRKQVASDNSDLDSASEITSKHRLLLESIVSLLPAEKGAVSCSFLLKLLKASNILNA 318
           G   +K        ++   E   + R++LE+IVSLLP EK A+S SFL  LL+A+  L  
Sbjct: 251 GKGMKK--------IEPKQE--HEKRVILETIVSLLPREKNAMSVSFLSMLLRAAIFLET 300

Query: 319 SSSSKMELATRVGLQLEEATGNDLLIPSLSYTND-TLYDVELVMTILEQFMARGQSPPTS 377
           + + +++L  R+GLQL +A  +DLLIPS S+T D +++D + V  IL  ++         
Sbjct: 301 TVACRLDLENRMGLQLGQAVLDDLLIPSYSFTGDHSMFDTDTVQRILMNYLE-------- 352

Query: 378 PPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXXXXXDRYLQEIARDVTFSLS 437
                  FE    R + N                          + Y+ EIA D   SL 
Sbjct: 353 -------FEVEGVRLSNN-----------GVDLAGDMERVGKLLENYMAEIASDRNVSLQ 394

Query: 438 KFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAA 497
           KFI LAE+IP+ +R   D +YRA+DIYLKAHP ++  ERK++C ++DC+KLS EAC HAA
Sbjct: 395 KFIGLAELIPEQSRVTEDGMYRAVDIYLKAHPNMSDVERKKVCSLMDCQKLSREACAHAA 454

Query: 498 QNELLPLRVVVQVLFFEQAR 517
           QN+ LP++ +VQVL++EQ R
Sbjct: 455 QNDRLPVQTIVQVLYYEQQR 474


>AT5G13600.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:4380432-4382497 FORWARD LENGTH=591
          Length = 591

 Score =  309 bits (792), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 192/524 (36%), Positives = 282/524 (53%), Gaps = 38/524 (7%)

Query: 1   MKFMKLGSRPDTFYTAEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSES 60
           M  +KLGS+ + F+ +       + +  D++IQV    + LHKFPLLS+   L+ L S++
Sbjct: 1   MASLKLGSKSEVFHLSGHTWLCKTGLKPDVMIQVVDESFHLHKFPLLSRSGYLETLFSKA 60

Query: 61  PDSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGN 120
            +++   + QL D PGG E F L AKFCYG+ I ++P N V+ RC+AEYLQM+E     N
Sbjct: 61  SETTC--VAQLHDIPGGPETFLLVAKFCYGVRIEVTPENAVSLRCAAEYLQMSENYGDAN 118

Query: 121 LIQKLDVFFNSCILRGWKDSIVSLQTT---KALHLWSEDLEITSRCIEAIASKVLSHPTK 177
           LI   + F N  +   W+DSI +L+ +   K L L +E+L I SRCI ++A K  +    
Sbjct: 119 LIYLTESFLNDHVFVNWEDSIKALEKSCEPKVLPL-AEELHIVSRCIGSLAMKACAEDNT 177

Query: 178 XXXXXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAE-LSIDLYWRTMIAIKSGGKVP 236
                                      +++ WW  D++  L + +Y R +  ++S G V 
Sbjct: 178 SFFNWPISLPEGTTTTTIYWNGIQTKATSENWWFNDVSSFLDLPMYKRFIKTVESRG-VN 236

Query: 237 SNLIGDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKH---RLLLESIVSL 293
           + +I  ++  YA R LP +      +RK  +      +   ++   H   R LLE IV L
Sbjct: 237 AGIIAASVTHYAKRNLPLLG----CSRKSGSPSEEGTNYGDDMYYSHEEQRSLLEEIVEL 292

Query: 294 LPAEKGAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDT 353
           LP +K   S  FLL+LL+ S +L+AS  ++  L  R+G+QL+EA   DLLIP++ Y+ +T
Sbjct: 293 LPGKKCVTSTKFLLRLLRTSMVLHASQVTQETLEKRIGMQLDEAALEDLLIPNMKYSGET 352

Query: 354 LYDVELVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXX 413
           LYD + V  IL+ FM              +TF+       + +                 
Sbjct: 353 LYDTDSVQRILDHFM--------------LTFDSSIVEEKQMMG---------DSHPLKS 389

Query: 414 XXXXXXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNK 473
                   D YL E+A D    LSKF +L  +IP+  R   D +YRAIDIY+KAHP L +
Sbjct: 390 ITKVASLIDGYLAEVASDENLKLSKFQALGALIPEDVRPMDDGIYRAIDIYIKAHPWLTE 449

Query: 474 SERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQAR 517
           SER++LC +++C+KLS+EAC HAAQNE LPLRV+VQVLFFEQ R
Sbjct: 450 SEREQLCLLMNCQKLSLEACTHAAQNERLPLRVIVQVLFFEQMR 493


>AT5G48800.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:19786881-19789003 FORWARD LENGTH=614
          Length = 614

 Score =  286 bits (731), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 182/517 (35%), Positives = 267/517 (51%), Gaps = 74/517 (14%)

Query: 25  EVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSESPDSSPHQIVQLPDFPGGIEAFELC 84
           +V SD+ I+V G  + LHKFPL+S+  R++++ +E  DS   + V+L + PGG E FEL 
Sbjct: 40  DVPSDITIEVNGGNFALHKFPLVSRSGRIRRIVAEHRDSDISK-VELLNLPGGAETFELA 98

Query: 85  AKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIVSL 144
           AKFCYGI   ++  N+    C ++YL+MTEE  K NL  + + +  S + +  +  +  L
Sbjct: 99  AKFCYGINFEITSSNVAQLFCVSDYLEMTEEYSKDNLASRTEEYLESIVCKNLEMCVQVL 158

Query: 145 QTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXXXXXXXXXXXXXXXXXCNETESVRHK 204
           + ++ L   +++L I  RCI+AIASK  +                      + +  V+  
Sbjct: 159 KQSEILLPLADELNIIGRCIDAIASKACAEQI----ASSFSRLEYSSSGRLHMSRQVKSS 214

Query: 205 SNKG-WWGEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNITKNGHVNR 263
            + G WW EDL+ L IDLY R M A+K  G  P + IG +L  YA R L   +++     
Sbjct: 215 GDGGDWWIEDLSVLRIDLYQRVMNAMKCRGVRPES-IGASLVSYAERELTKRSEH----- 268

Query: 264 KQVASDNSDLDSASEITSKHRLLLESIVSLLPAEKGAVSCSFLLKLLKASNILNASSSSK 323
                               + ++E+IV+LLP E   V  SFL  LL+ + IL+ S S +
Sbjct: 269 -------------------EQTIVETIVTLLPVENLVVPISFLFGLLRRAVILDTSVSCR 309

Query: 324 MELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVELVMTILEQFMARGQ----------- 372
           ++L  R+G QL+ AT +DLLIPS  +  DTL+D++ V  IL  F  +G            
Sbjct: 310 LDLERRLGSQLDMATLDDLLIPSFRHAGDTLFDIDTVHRILVNFSQQGGDDSEDEESVFE 369

Query: 373 -SPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXXXXXDRYLQEIARD 431
              P SP ++ M                                      D YL EIA D
Sbjct: 370 CDSPHSPSQTAM-------------------------------FKVAKLVDSYLAEIAPD 398

Query: 432 VTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSME 491
               LSKF+ +AE +P  AR  HD LYRAID+YLKAH  L+ S++K+L +++D +KLS E
Sbjct: 399 ANLDLSKFLLIAEALPPHARTLHDGLYRAIDLYLKAHQGLSDSDKKKLSKLIDFQKLSQE 458

Query: 492 ACMHAAQNELLPLRVVVQVLFFEQARAAATNGDKVSD 528
           A  HAAQNE LPL+ +VQVL+FEQ +  ++     SD
Sbjct: 459 AGAHAAQNERLPLQSIVQVLYFEQLKLRSSLCSSYSD 495


>AT5G66560.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:26564368-26566662 FORWARD LENGTH=668
          Length = 668

 Score =  277 bits (708), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 187/545 (34%), Positives = 278/545 (51%), Gaps = 94/545 (17%)

Query: 28  SDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSESPDSS----------------------- 64
           SD+ I+V    + LHKFPL+SK  +L +L +E    S                       
Sbjct: 21  SDIEIEVDDMTFHLHKFPLMSKSRKLHRLITEQETRSSSSMALITVIDPKVEETDKKGKG 80

Query: 65  ----------------------PHQIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVA 102
                                 PH  ++L DFPG  E+FE+ AKFCYG+ + LS   +V 
Sbjct: 81  HEIEDDKEEEEVEEQEIEENGYPH--IKLEDFPGSSESFEMVAKFCYGVKMDLSASTVVP 138

Query: 103 ARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSR 162
            RC+AE+L+MTEE    NLI K + F +  + +  ++SI +L+  +++   +  L IT +
Sbjct: 139 LRCAAEHLEMTEEYSPDNLISKTERFLSHSVYKSLRESIKALKACESVSPLAGSLGITEQ 198

Query: 163 CIEAIASKVLSH-------PTKXXXXXXXXXXXXXXXXXCNETESVR---HKSNKGWWGE 212
           CI++I S+  S        P                       +S +     SN   W E
Sbjct: 199 CIDSIVSRASSADPSLFGWPVNDGGGRGNISATDLQLIPGGAAKSRKKPSRDSNMELWFE 258

Query: 213 DLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNITKNGHVNRKQVASDNSD 272
           DL +LS+ ++   +++++SG  + S++I   L  YA + +P I ++   NRK  +S ++ 
Sbjct: 259 DLTQLSLPIFKTVILSMRSG-DLSSDIIESCLICYAKKHIPGILRS---NRKPPSSSST- 313

Query: 273 LDSASEITSKHRLLLESIVSLLPAEKGAVSCS--FLLKLLKASNILNASSSSKMELATRV 330
             + SE  ++ R LLE+I S LP +K ++S +  FL  LL+ + ILNA+   +  L  ++
Sbjct: 314 --AVSE--NEQRELLETITSNLPLDKSSISSTTRFLFGLLRTAIILNAAEICRDLLERKI 369

Query: 331 GLQLEEATGNDLLIPSLSYTNDTLYDVELVMTILEQFMARGQSPPTSPPRSLMTFERRRS 390
           G QLE AT +DLL+PS SY N+TLYDV+LV  IL  F              L T E+  +
Sbjct: 370 GSQLERATLDDLLVPSYSYLNETLYDVDLVERILGHF--------------LDTLEQSNT 415

Query: 391 RSAENINFEFQEXXXXXXXXXXXXXXXXXXXDRYLQEIARDVTFSLSKFISLAEIIPDFA 450
              E                           D +L EIA D      KF +LA  +PD A
Sbjct: 416 AIVE------------VDGKSPSLMLVGKLIDGFLAEIASDANLKSDKFYNLAISLPDQA 463

Query: 451 RQDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQV 510
           R   D LYRA+D+YLKAHP ++++ER+++C ++DC+KL++EAC HAAQNE LPLR VVQV
Sbjct: 464 RLYDDGLYRAVDVYLKAHPWVSEAEREKICGVMDCQKLTLEACTHAAQNERLPLRAVVQV 523

Query: 511 LFFEQ 515
           LFFEQ
Sbjct: 524 LFFEQ 528


>AT3G44820.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:16361864-16364411 REVERSE LENGTH=651
          Length = 651

 Score =  276 bits (705), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 188/561 (33%), Positives = 293/561 (52%), Gaps = 64/561 (11%)

Query: 28  SDLIIQVRGTRYLLHKFPLLSKCLRLQKLC--SESPDSSPHQIVQLPDFPGGIEAFELCA 85
           SD+ + V   ++ LHKFPL+SKC +L ++   S+S D        L +FPGG + F + A
Sbjct: 25  SDITVVVDDVKFHLHKFPLVSKCGKLARMYEDSKSTDKQSLWTTVLEEFPGGADNFLIVA 84

Query: 86  KFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIVSLQ 145
           +FCYG  + ++  N+V+  C+AEYL+MT E  + NLI +++ F +  +LR WKD I++LQ
Sbjct: 85  RFCYGARVDITSKNLVSIHCAAEYLEMTNEYGEDNLISQVETFLHKHVLRNWKDCILALQ 144

Query: 146 TTKALHLWSEDLEITSRCIEAIASKVLSHPT----KXXXXXXXXXXXXXXXXXCNETESV 201
           ++  +   +E L++  + + A+++ V + P+                         T + 
Sbjct: 145 SSSPVLKSAEKLQMIPKLMNAVSTMVCTDPSLFGWPMMMYGTLQSPGGSILWNGINTGAR 204

Query: 202 RHKSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNI------ 255
              S   WW ED++ LS+DL+ R +  +++ G    +L G A+  YA ++LP +      
Sbjct: 205 MRSSGSDWWYEDISYLSVDLFKRLIKTMETKGIRAESLAG-AMMYYARKYLPGLGRWQSG 263

Query: 256 TKNGHVNRKQVASDNSDLDSASEITSKHRL----LLESIVSLLPAEKGAVSCSFLLKLLK 311
           T +   +R++V S N  L  AS  +S   L    LLE+I+SLLP ++G   C FLL LL+
Sbjct: 264 TSDSSKSRRRVVSFN--LAKASSPSSMPPLDQIALLETILSLLPEKRGRSFCKFLLGLLR 321

Query: 312 ASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTN-DTLYDVELVMTILEQFM-- 368
            + IL    +   +L  R+G+QLE AT ++LLI  L+Y++ +TLY+V+ V  I+  F+  
Sbjct: 322 VAFILGVDGNCVKKLEKRIGMQLELATLDNLLI--LNYSDSETLYNVDCVERIVRHFVSS 379

Query: 369 ---ARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXXXXXDRYL 425
              +  Q P  SPP    + +   S S   +                         D Y+
Sbjct: 380 LSSSSSQLPEFSPP----SLDPVTSPSPAPLK------------------KVANLVDSYM 417

Query: 426 QEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERKRLCRILDC 485
            E+A DV     K  SLA  +P+ +R  +D LYRA DIY K HP L+  ++++LC I+D 
Sbjct: 418 AEVASDVNLKPDKMRSLAAALPESSRPLYDGLYRAFDIYFKEHPWLSDRDKEQLCNIMDY 477

Query: 486 KKLSMEACMHAAQNELLPLRVVVQVLFFEQA--RAAATNGDKVSDLPSNIKTLLTAHGID 543
           ++LS++AC HA+ N+ LPLRVV+QVLFFEQ   R A   G        N+    TAH + 
Sbjct: 478 QRLSIDACAHASHNDRLPLRVVLQVLFFEQMHLRTALAGG-------LNVANTETAHAV- 529

Query: 544 PSKHTAPLS-TTTSINAEDNW 563
               T P   T   I   D W
Sbjct: 530 ----TIPGGRTGQEIVQRDGW 546


>AT5G10250.1 | Symbols: DOT3 | Phototropic-responsive NPH3 family
           protein | chr5:3217028-3219368 REVERSE LENGTH=607
          Length = 607

 Score =  275 bits (703), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 173/523 (33%), Positives = 270/523 (51%), Gaps = 82/523 (15%)

Query: 22  VSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSESPDSSPHQIVQLPDFPGGIEAF 81
           V S++ +DL IQV    +  HKFPL+SKC  +  +  +   S     ++L +FPGG + F
Sbjct: 46  VKSQIPTDLSIQVNDITFKAHKFPLISKCGYISSIELKPSTSENGYHLKLENFPGGADTF 105

Query: 82  ELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSI 141
           E   KFCY + + L+P N+   RC++EYL MTEE E GNLI K + F    +L  W+D++
Sbjct: 106 ETILKFCYNLPLDLNPLNVAPLRCASEYLYMTEEFEAGNLISKTEAFITFVVLASWRDTL 165

Query: 142 VSLQTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXXXXXXXXXXXXXXXXXCNET--- 198
             L++   L  W+E+L+I  RC + +A K                        CN+    
Sbjct: 166 TVLRSCTNLSPWAENLQIVRRCCDLLAWKA-----------------------CNDNNIP 202

Query: 199 ESVRHKSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNITKN 258
           E V  ++ +  +  D+A L ID + R +  +K+    P  + G  +  YA  +LP I  +
Sbjct: 203 EDVVDRNERCLYN-DIATLDIDHFMRVITTMKARRAKPQ-ITGKIIMKYADNFLPVINDD 260

Query: 259 -----GH---VNRKQVASDNSDLDSASEI-TSKHRLLLESIVSLLPAEKGAVSCSFLLKL 309
                G+    N  Q + +   ++ ++ +   +H+  +ES+VS+LP + GAVSC FLL++
Sbjct: 261 LEGIKGYGLGKNELQFSVNRGRMEESNSLGCQEHKETIESLVSVLPPQSGAVSCHFLLRM 320

Query: 310 LKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVELVMTILEQFMA 369
           LK S + +AS +   +L  RVG+ LE+A   DLLIP  ++ N+   + +  + I E F+ 
Sbjct: 321 LKTSIVYSASPALISDLEKRVGMALEDANVCDLLIP--NFKNE---EQQERVRIFEFFLM 375

Query: 370 RGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXXXXXDRYLQEIA 429
             Q      P                                          D YL EIA
Sbjct: 376 HEQQQVLGKP------------------------------------SISKLLDNYLAEIA 399

Query: 430 RDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLS 489
           +D    ++KF  LAE++P+ A + HD LYRAID++LK HP L+  +R+RLC+ ++C+KLS
Sbjct: 400 KDPYLPITKFQVLAEMLPENAWKCHDGLYRAIDMFLKTHPSLSDHDRRRLCKTMNCEKLS 459

Query: 490 MEACMHAAQNELLPLRVVV----QVLFFEQARAAATNGDKVSD 528
           ++AC+HAAQN+ LPLR +V    QVLF EQ +      DK+ +
Sbjct: 460 LDACLHAAQNDRLPLRTIVQINTQVLFSEQVKMRMMMQDKLPE 502


>AT1G03010.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:693480-696188 FORWARD LENGTH=634
          Length = 634

 Score =  274 bits (700), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 180/501 (35%), Positives = 275/501 (54%), Gaps = 38/501 (7%)

Query: 24  SEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSESPDSSPHQIVQLPDFPGGIEAFEL 83
           S+V SDL +QV  + + LHKFPL+S+  +++KL ++   S+    V L + PGG EAFEL
Sbjct: 34  SDVSSDLTVQVGSSSFCLHKFPLVSRSGKIRKLLADPKISN----VCLSNAPGGSEAFEL 89

Query: 84  CAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIVS 143
            AKFCYGI I ++  NI   RC++ YL+MTE+  + NL  K + F    I     +SI+ 
Sbjct: 90  AAKFCYGINIEINLLNIAKLRCASHYLEMTEDFSEENLASKTEHFLKETIFPSILNSIIV 149

Query: 144 LQTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXXXXXXXXXXXXXXXXXCNETESVRH 203
           L   + L   SEDL + +R I A+A+                              ++  
Sbjct: 150 LHHCETLIPVSEDLNLVNRLIIAVANNACKEQLTSGLLKLDYSFSGT---------NIEP 200

Query: 204 KSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPN-ITKNGHVN 262
           ++   WWG+ LA L++D + R + A+KS G +  ++I   L  Y ++ L   I ++  + 
Sbjct: 201 QTPLDWWGKSLAVLNLDFFQRVISAVKSKGLI-QDVISKILISYTNKSLQGLIVRDPKLE 259

Query: 263 RKQVASDNSDLDSASEITSKHRLLLESIVSLLPAE--KGAVSCSF---LLKLLKASNILN 317
           +++V      LD  SE   K RL++E+IV LLP +  + +V  +F   LLK++ A++   
Sbjct: 260 KERV------LD--SEGKKKQRLIVETIVRLLPTQGRRSSVPMAFLSSLLKMVIATSSSA 311

Query: 318 ASSSSKMELATRVGLQLEEATGNDLLIP-SLSYTNDTLYDVELVMTILEQFMARGQSPPT 376
           ++ S + +L  R+GLQL++A   D+LIP +L+ TN+T+YD++ ++ I   F+   +    
Sbjct: 312 STGSCRSDLERRIGLQLDQAILEDVLIPINLNGTNNTMYDIDSILRIFSIFLNLDEDDEE 371

Query: 377 SPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXXXXXDRYLQEIARDVTFSL 436
                L      + R    + ++F                     D YL EIA D   + 
Sbjct: 372 EEHHHL------QFRDETEMIYDFDS---PGSPKQSSILKVSKLMDNYLAEIAMDPNLTT 422

Query: 437 SKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHA 496
           SKFI+LAE++PD AR   D LYRA+DIYLK HP +  SER RLC+ +D +KLS EAC HA
Sbjct: 423 SKFIALAELLPDHARIISDGLYRAVDIYLKVHPNIKDSERYRLCKTIDSQKLSQEACSHA 482

Query: 497 AQNELLPLRVVVQVLFFEQAR 517
           AQNE LP+++ VQVL+FEQ R
Sbjct: 483 AQNERLPVQMAVQVLYFEQIR 503


>AT3G08570.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:2602258-2604412 REVERSE LENGTH=617
          Length = 617

 Score =  269 bits (688), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 191/578 (33%), Positives = 289/578 (50%), Gaps = 57/578 (9%)

Query: 13  FYTAEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSESPDSSPH-QIVQL 71
           F ++ A R + S+V  D+ I V G  +LLHKFPL+++C +++K+ +E  +SS +    +L
Sbjct: 22  FSSSFATR-IFSDVAGDITIVVDGESFLLHKFPLVARCGKIRKMVAEMKESSSNLSHTEL 80

Query: 72  PDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNS 131
            DFPGG + FEL  KFCYGI   ++  N+VA RC+A YL+MTE+ ++ NLI + + +   
Sbjct: 81  RDFPGGSKTFELAMKFCYGINFEITISNVVAIRCAAGYLEMTEDFKEENLIARTETYLEQ 140

Query: 132 CILRGWKDSIVSLQTTKALHLW--SEDLEITSRCIEAIASKVLSHPTKXXXXXXXXXXXX 189
              R  + S+  L + + L+    +E   I  RC+EAIA                     
Sbjct: 141 VAFRSLEKSVEVLCSCETLYPQDIAETAHIPDRCVEAIAVNACRE---------QLVLGL 191

Query: 190 XXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYAS 249
                  E+  ++   +  WW EDL+ L ID Y R + A+   G    ++I  +L  YA 
Sbjct: 192 SRLNRGTESGELKRGDSPEWWIEDLSALRIDYYARVVSAMARTGLRSESII-TSLMHYAQ 250

Query: 250 RWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLESIVSLLPAEKGAVSCSFLLKL 309
             L  I             + + LDS +   ++ R +LE+IVSL P +   V  SFL  +
Sbjct: 251 ESLKGIRN---------CKERTKLDSGT-FENEQRNVLEAIVSLFPNDN--VPLSFLFGM 298

Query: 310 LKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVELVMTILEQFMA 369
           L+    +N + S ++EL  R+  QLE  + +DLLIP +    D++YDV+ V  IL  F+ 
Sbjct: 299 LRVGITINVAISCRLELERRIAQQLETVSLDDLLIPVVR-DGDSMYDVDTVHRILVCFLK 357

Query: 370 RGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXXXXXDRYLQEIA 429
           + +             E       EN+                         D YL EIA
Sbjct: 358 KIEEEEEYDEDCCYENE------TENLT---------GSMCHSSLLKVGRIMDAYLAEIA 402

Query: 430 RDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLS 489
            D   SL KF++L EI+PD+AR   D LYRAID++LK HP LN+ E K LC+ +D +KLS
Sbjct: 403 PDPCLSLHKFMALIEILPDYARVMDDGLYRAIDMFLKGHPSLNEQECKSLCKFIDTQKLS 462

Query: 490 MEACMHAAQNELLPLRVVVQVLFFEQARAAATNGDKVSDLPSNIKTLLTAH---GIDPSK 546
            EAC H AQN+ LP+++VV+VL+ EQ R        V    S    LL++      +PS+
Sbjct: 463 QEACNHVAQNDRLPMQMVVRVLYSEQLRM-----KNVMSGESGEGLLLSSQKHSSENPSR 517

Query: 547 HTAPLSTTTSINAEDNWSVSGFKSPKSRSSTLRMKLAE 584
             +P  T  S+  E+       +  K   S +R++L E
Sbjct: 518 AVSPRDTYASLRREN-------RELKLEISRVRVRLTE 548


>AT5G64330.2 | Symbols: NPH3, RPT3, JK218 | Phototropic-responsive
           NPH3 family protein | chr5:25727568-25729510 FORWARD
           LENGTH=558
          Length = 558

 Score =  263 bits (671), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 172/528 (32%), Positives = 259/528 (49%), Gaps = 70/528 (13%)

Query: 7   GSRPDTFYTAEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSESPDSSPH 66
           G + D F        V++++ SDL++++    + LHK+PLLS+  ++ +L  ES D  P 
Sbjct: 33  GVKTDGFELRGQSWFVATDIPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYESRDPDP- 91

Query: 67  QIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLD 126
            I+ L D PGG EAFEL +KFCYG+ + L+  NI   RC+AEYL+MTE++E+GNLI K +
Sbjct: 92  TILILDDLPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIFKTE 151

Query: 127 VFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKVLSHP----------- 175
            F +  +L  W+DSI+ L++ + L  W+E+L+I  RC E+IA K  S+P           
Sbjct: 152 AFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKACSNPKGIRWAYTGKA 211

Query: 176 -----TKXXXXXXXXXXXXXXXXXCNETESVRHKS-NKGWWGEDLAELSIDLYWRTMIAI 229
                T                  C+ + +   +     WW ED++ L ID + R + AI
Sbjct: 212 PSPSTTNFAGSSPRWNESKDSSFYCSPSRNTNSQPVPPDWWFEDVSILRIDHFVRVITAI 271

Query: 230 KSGGKVPSNLIGDALKIYASRWLPNITKNGHVNRKQVASD-------------------- 269
           K  G +   L+G  +  YA +WLP + K G V      S                     
Sbjct: 272 KVKG-MRFELLGAVIMHYAGKWLPGLIKEGGVAIAPAMSSAIGGGLGLGGDEMSISCGSN 330

Query: 270 -----------------------NSDLDSASEITS------KHRLLLESIVSLLPAEKGA 300
                                  N   DS + +          R+++ES++S++P +K +
Sbjct: 331 SSGGSSGPDWKGGLHMVLSAGKTNGHQDSVACLAGLGISPKDQRMIVESLISIIPPQKDS 390

Query: 301 VSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVELV 360
           V+CSFLL+LL+A+N+L  + +   EL  RVG+Q E+AT  DLLIP  +   +T+YDV+LV
Sbjct: 391 VTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQDLLIPGYNNKGETMYDVDLV 450

Query: 361 MTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXXXX 420
             +LE F+ + Q+       S M+    +S  A+                          
Sbjct: 451 QRLLEHFLVQEQT--EGSSPSRMSPSPSQSMYADIPRGNNNNGGGGGGNNQNAKMRVARL 508

Query: 421 XDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAH 468
            D YL E+ARD    L+KF  LAE +P+ AR   D LYRAID YLK +
Sbjct: 509 VDSYLTEVARDRNLPLTKFQVLAEALPESARTCDDGLYRAIDSYLKVY 556


>AT3G08660.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:2631130-2633166 FORWARD LENGTH=582
          Length = 582

 Score =  262 bits (670), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 183/547 (33%), Positives = 279/547 (51%), Gaps = 98/547 (17%)

Query: 8   SRPDTFYTAEAIRSVSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSESPDSSPHQ 67
           S P TF T      + S+V  D+I+ V G  +LLHKFPL+++  +++K+  +  DSS   
Sbjct: 21  SVPPTFTT-----RIFSDVAGDIIVVVDGESFLLHKFPLVARSGKMRKMVRDLKDSS--S 73

Query: 68  IVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDV 127
           +++L DFPGG   FEL  KFCYGI   ++ +N+V+ RC+A YL+MTE+ ++ NLI + + 
Sbjct: 74  MIELRDFPGGPSTFELTMKFCYGINFDITAFNVVSLRCAAGYLEMTEDYKEQNLIFRAEN 133

Query: 128 FFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXXXXXXXXXX 187
           + +  + R + +S++ L + +   + +E  EI  RC+EAIA                   
Sbjct: 134 YLDQIVFRSFHESVLVLCSCETQEI-AETYEIPDRCVEAIAMNAC--------------- 177

Query: 188 XXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIY 247
                     +E ++ +     W E+L+ L ID Y+  +++  +   V S  I  +L  Y
Sbjct: 178 --RKQLVSGLSEELKGRDCLEMWTEELSALGID-YYVQVVSAMARLSVRSESIVASLVHY 234

Query: 248 ASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLESIVSLLPA-EKGAVSCS-- 304
           A   L  I     ++R                  + R ++E++V+LLP  EKG+ S S  
Sbjct: 235 AKTSLKGI-----IDRN---------------CQEQRKIVEAMVNLLPNDEKGSYSLSII 274

Query: 305 ---FLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVELVM 361
              FL  +LK   I++   S ++EL  R+G QLE A+ +DLLIPS+    D++YDV+ V 
Sbjct: 275 PLGFLFGMLKVGTIIDIEISCRLELERRIGHQLETASLDDLLIPSVQ-NEDSMYDVDTVH 333

Query: 362 TILEQFMARGQ---------SPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXX 412
            IL  F+ R +         S  T    SL+   R                         
Sbjct: 334 RILTFFLERIEEEDDECGYDSDSTGQHSSLLKVGR------------------------- 368

Query: 413 XXXXXXXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELN 472
                    D YL EIA D   SL KF ++ E +P+ +R   D +YRAID+YLKAHP L 
Sbjct: 369 -------IMDAYLVEIAPDPYLSLHKFTAIIETLPEHSRIVDDGIYRAIDMYLKAHPLLT 421

Query: 473 KSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQAR-AAATNGDKVSD--- 528
           + ERK+LC  +DCKKLS EA  H AQN+ LP+++VV+VL+ EQ R   A +GD       
Sbjct: 422 EEERKKLCNFIDCKKLSQEASNHVAQNDRLPVQMVVRVLYTEQLRLKKALSGDSEEGSWV 481

Query: 529 LPSNIKT 535
           LPS +++
Sbjct: 482 LPSGVQS 488


>AT3G49970.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:18527216-18529066 REVERSE LENGTH=526
          Length = 526

 Score =  261 bits (668), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 165/466 (35%), Positives = 252/466 (54%), Gaps = 73/466 (15%)

Query: 39  YLLHKFPLLSKCLRLQKLCSESPDSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPY 98
           +LLHKFPL+SKC  ++KL SES + S   I+++PDFPGG E FEL  KFCY I+  ++  
Sbjct: 7   FLLHKFPLVSKCGFIKKLASESSNDS--NIIRIPDFPGGAEGFELVIKFCYDISFEINTE 64

Query: 99  NIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLE 158
           NI    C+AEYL+MTEE    NL++ ++V+ N  IL+    S+  LQ ++ L   +E + 
Sbjct: 65  NIAMLLCAAEYLEMTEEHSVENLVETIEVYLNEVILKSLSKSVKVLQKSQDLLPIAERVR 124

Query: 159 ITSRCIEAIASKVLSHPTKXXXXXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAELS 218
           +  RCI++IA  +                       C E++S  ++    WW +DLA L 
Sbjct: 125 LVDRCIDSIAYAI-----------------------CQESQS--NEDIVDWWADDLAVLK 159

Query: 219 IDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNITKNGHVNRKQ---VASDNSDLDS 275
           ID++ R ++A+ + G    +L G  LK+YA + L  + +  +   +Q      +   +++
Sbjct: 160 IDMFRRVLVAMIARGFKRYSL-GPVLKLYAEKALRGLVRFLNFLTEQCDIFGKEAKKMEA 218

Query: 276 ASEITSKHRLLLESIVSLLPAEKGAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLE 335
             E   + RL+LE+IVSLLP E+ +VS SFL  LL+A+  L  + + +++L  R+GLQL 
Sbjct: 219 EQE--HEKRLILETIVSLLPRERNSVSVSFLSILLRAAIYLETTVACRLDLEKRMGLQLR 276

Query: 336 EATGNDLLIPSLSYTND-TLYDVELVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAE 394
           +A  +DLLIP  S+  D T+ DV+ V  IL  ++                 E   +  A 
Sbjct: 277 QAVIDDLLIPYYSFNGDNTMLDVDTVQRILMNYLE-------------FEVEGNSADFAS 323

Query: 395 NINFEFQEXXXXXXXXXXXXXXXXXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDH 454
           +I  E  E                     YL EIA D   + +KFI  AE IP  +R   
Sbjct: 324 DIG-ELMET--------------------YLAEIASDRNINFAKFIGFAECIPKQSR--- 359

Query: 455 DDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNE 500
             +YRAIDI+LK HP +++ E+K++C ++DCKKLS +   HAAQN+
Sbjct: 360 --MYRAIDIFLKTHPNISEVEKKKVCSLMDCKKLSRDVYAHAAQND 403


>AT2G47860.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr2:19599979-19602088 FORWARD LENGTH=635
          Length = 635

 Score =  257 bits (656), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 169/496 (34%), Positives = 248/496 (50%), Gaps = 38/496 (7%)

Query: 24  SEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSESPDSSPHQIVQLPDFPGGIEAFEL 83
           S+V SDL I+V    + LHKFPL+S+  R++KL  ES D++    + L   PGG E+FEL
Sbjct: 35  SDVTSDLTIEVGSATFSLHKFPLVSRSGRIRKLVLESKDTN----LNLAAVPGGSESFEL 90

Query: 84  CAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIVS 143
            AKFCYG+ +  +  NI A RC A YL+MTE++ + NL  + + +    I     +SI  
Sbjct: 91  AAKFCYGVGVQYNSSNIAALRCVAHYLEMTEDLSEKNLEARTEAYLKDSIFNDISNSITV 150

Query: 144 LQTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXXXXXXXXXXXXXXXXXCNETESVRH 203
           L + + L   +E++ +  R + AIA                          C   E+ + 
Sbjct: 151 LHSCERLLPVAEEINLVGRLVNAIAVNACKE------QLASGLLKLDQSFSCGVPETAKP 204

Query: 204 KSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNITKNGHVNR 263
                WWG  L  L +D + R + A+KS G +  ++I D L  YA + L           
Sbjct: 205 CD---WWGRSLPILKLDFFQRVLSAMKSKG-LNHDIISDILMSYARKSL----------- 249

Query: 264 KQVASDNSDLDSASEITSKHRLLLESIVSLLP--AEKGAVSCSFLLKLLKASNILNASSS 321
            Q+  + + + S S++  K R++LE++V LLP  A K ++  SFL  LLK +     S S
Sbjct: 250 -QIIREPNLVKSDSDLQRKQRIVLEAVVGLLPTQANKSSIPISFLSSLLKTAIGSGTSVS 308

Query: 322 SKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVELVMTILEQFMARGQSPPTSPPRS 381
            + +L  R+   L++A   D+LIP+       +YD + V  I   F+             
Sbjct: 309 CRSDLERRISHLLDQAILEDILIPA---NIGAMYDTDSVQRIFSMFL--NLDECEYRDDD 363

Query: 382 LMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXXXXXDRYLQEIARDVTFSLSKFIS 441
               +          +FE  E                   D YL E+A D +   SKFI+
Sbjct: 364 DDEEDAVDESEMAMYDFEGAE-----SPKQSSIFKVSKLMDSYLAEVALDSSLPPSKFIA 418

Query: 442 LAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNEL 501
           LAE++PD AR   D LYRA+DI+LK HP +  SER RLC+ + CKKLS +A  HAAQNE 
Sbjct: 419 LAELLPDHARVVCDGLYRAVDIFLKVHPHMKDSERYRLCKTVSCKKLSQDASSHAAQNER 478

Query: 502 LPLRVVVQVLFFEQAR 517
           LP+++ VQVLF+EQ R
Sbjct: 479 LPVQIAVQVLFYEQTR 494


>AT2G30520.1 | Symbols: RPT2 | Phototropic-responsive NPH3 family
           protein | chr2:13002920-13005573 REVERSE LENGTH=593
          Length = 593

 Score =  253 bits (646), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 166/517 (32%), Positives = 263/517 (50%), Gaps = 56/517 (10%)

Query: 23  SSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSESPDSSPHQIVQLPDFPGGIEAFE 82
           S ++ +D++++V    + LHKF L++K   ++KL  ES DS   +I  L D PGG E FE
Sbjct: 27  SQDIPTDVVVEVGEANFSLHKFMLVAKSNYIRKLIMESKDSDVTRI-NLSDIPGGPEIFE 85

Query: 83  LCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIV 142
             AKFCYG+   ++  N+ A  C+AE+LQMT++    NL  +   F +   L     +IV
Sbjct: 86  KAAKFCYGVNFEITVQNVAALHCAAEFLQMTDKYCDNNLAGRTQDFLSQVALSSLSGAIV 145

Query: 143 SLQTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXXXXXXXXXXXXXXXXXCNETESVR 202
            L++ + L   S DL I  RC++ + +K                        CNE     
Sbjct: 146 VLKSCEILLPISRDLGIVRRCVDVVGAKA-----------------------CNEA-MFP 181

Query: 203 HKSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNITKNGHVN 262
            ++   WW E+L  L +D +   + ++K  G  PS+L   A+  Y  + L ++ ++ H  
Sbjct: 182 CRTPPNWWTEELCILDVDFFSDVVSSMKQRGVKPSSL-ASAIITYTEKSLRDLVRD-HSG 239

Query: 263 RKQVASDNSDLDSASEITSKHRLLLESIVSLLPAEKGAVSCSFLLKLLKASNILNASSSS 322
           R    SD    D+ S+  S+ R L++SIVSLLP++KG    +FL  LL+ +  L+ S + 
Sbjct: 240 RGVKYSDPG--DNESDERSQQRDLVQSIVSLLPSDKGLFPVNFLCSLLRCAVFLDTSLTC 297

Query: 323 KMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVELVMTILEQFMARGQSPPTSPPRSL 382
           K EL  R+ + LE  + +DLLIPS +Y  + L D++ V  I+  F+ +            
Sbjct: 298 KNELEKRISVVLEHVSVDDLLIPSFTYDGERLLDLDSVRRIISAFVEK------------ 345

Query: 383 MTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXXXXXDRYLQEIARDVTFSLSKFISL 442
                      +N+   F                     D YL EIA     ++SKF ++
Sbjct: 346 ----------EKNVGV-FNGGDFNRGVCSVSLQRVAKTVDSYLAEIATYGDLTISKFNAI 394

Query: 443 AEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELL 502
           A ++P  AR+  DDLYRAIDI+LKAHP L++ ER+++C  +D  KLS +A +HA+QN+ L
Sbjct: 395 ANLVPKSARKSDDDLYRAIDIFLKAHPNLDEIEREKVCSSMDPLKLSYDARLHASQNKRL 454

Query: 503 PLRVVVQVLFFEQAR----AAATNGDKVSDLPSNIKT 535
           P+ +V+  L+++Q +     A      V  LP  +KT
Sbjct: 455 PVNIVLHALYYDQLKLRSGVAEQEERAVVVLPEALKT 491


>AT3G50840.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:18896353-18898374 REVERSE LENGTH=569
          Length = 569

 Score =  248 bits (632), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 165/488 (33%), Positives = 248/488 (50%), Gaps = 48/488 (9%)

Query: 28  SDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSESPDSSPHQIVQLPDFPGGIEAFELCAKF 87
           SD+ I+V    + LHKFPL+SK  +L +L +E   S  +  ++L +FPGG E FE+  K 
Sbjct: 18  SDIEIEVDDITFHLHKFPLMSKSKKLHQLITEQEQSKVYSHIKLENFPGGSEIFEMVIKI 77

Query: 88  CYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIVSLQTT 147
            YG  + +S    V  RC+AEYL+MTEE    NLI K + F +  +    ++SI +L+  
Sbjct: 78  SYGFKVDISVSTAVPLRCAAEYLEMTEEYSPENLISKTEKFLSEFVFTNVQESIKALKAC 137

Query: 148 KALHLWSEDLEITSRCIEAIASKVLSHPTKXXXXXXXXXXXXXXXXXCNETESVRHKSNK 207
           +++   +E L IT +CI++I  +  S                       +++     S  
Sbjct: 138 ESVSSLAESLCITEQCIDSIVFQASSTDPSSFYGWPINNGGIFTVDRKKQSKD----SKT 193

Query: 208 GWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNITKNGHVNRKQVA 267
             W EDL ELS  ++ R ++++KS    P  ++  +L  YA + +P     G       +
Sbjct: 194 ELWFEDLTELSFPIFRRVILSMKSSVLSP-EIVERSLLTYAKKHIP-----GISRSSSAS 247

Query: 268 SDNSDLDSASEITSKHRLLLESIVSLLPAEKGAVSCSFLLKLLKASNILNASSSSKMELA 327
           S +S   +     ++ R LLE+I S LP    A +   L  LL+A+ ILNAS + +  L 
Sbjct: 248 SSSSSSSTTIASENQQRELLETITSDLPL--TATTTRSLFGLLRAAIILNASENCRKFLE 305

Query: 328 TRVGLQLEEATGNDLLIPSLSYTNDTLYDVELVMTILEQFMARGQSPPTSPPRSLMTFER 387
            ++G  LE+AT +DLLIPS SY N+TLYD++LV  +L +F+                   
Sbjct: 306 KKIGSNLEKATLDDLLIPSYSYLNETLYDIDLVERLLRRFL------------------- 346

Query: 388 RRSRSAENINFEFQEXXXXXXXXXXXXXXXXXXXDRYLQEIARDVTFSLSKFISLAEIIP 447
                 EN+                         D  L EIA D      +F +LA ++P
Sbjct: 347 ------ENV-----------AVSSSSLTVVGRLIDGVLGEIASDANLKPEQFYNLAVLLP 389

Query: 448 DFARQDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVV 507
             AR   D LYRA+DIY K H  + + E++++C ++DC+KL++E C HAAQNE LPLR V
Sbjct: 390 VQARVYDDGLYRAVDIYFKTHSWILEEEKEKICSVMDCRKLTVEGCTHAAQNERLPLRAV 449

Query: 508 VQVLFFEQ 515
           VQVLF EQ
Sbjct: 450 VQVLFLEQ 457


>AT2G47860.3 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr2:19599979-19602088 FORWARD LENGTH=658
          Length = 658

 Score =  244 bits (623), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 169/519 (32%), Positives = 248/519 (47%), Gaps = 61/519 (11%)

Query: 24  SEVCSDLIIQVRGTRYLLHK-----------------------FPLLSKCLRLQKLCSES 60
           S+V SDL I+V    + LHK                       FPL+S+  R++KL  ES
Sbjct: 35  SDVTSDLTIEVGSATFSLHKVTKFNKLRRKKRNCFTQTRSLLQFPLVSRSGRIRKLVLES 94

Query: 61  PDSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGN 120
            D++    + L   PGG E+FEL AKFCYG+ +  +  NI A RC A YL+MTE++ + N
Sbjct: 95  KDTN----LNLAAVPGGSESFELAAKFCYGVGVQYNSSNIAALRCVAHYLEMTEDLSEKN 150

Query: 121 LIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXXX 180
           L  + + +    I     +SI  L + + L   +E++ +  R + AIA            
Sbjct: 151 LEARTEAYLKDSIFNDISNSITVLHSCERLLPVAEEINLVGRLVNAIAVNACKE------ 204

Query: 181 XXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLI 240
                         C   E+ +      WWG  L  L +D + R + A+KS G +  ++I
Sbjct: 205 QLASGLLKLDQSFSCGVPETAKPCD---WWGRSLPILKLDFFQRVLSAMKSKG-LNHDII 260

Query: 241 GDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLESIVSLLP--AEK 298
            D L  YA + L            Q+  + + + S S++  K R++LE++V LLP  A K
Sbjct: 261 SDILMSYARKSL------------QIIREPNLVKSDSDLQRKQRIVLEAVVGLLPTQANK 308

Query: 299 GAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVE 358
            ++  SFL  LLK +     S S + +L  R+   L++A   D+LIP+       +YD +
Sbjct: 309 SSIPISFLSSLLKTAIGSGTSVSCRSDLERRISHLLDQAILEDILIPA---NIGAMYDTD 365

Query: 359 LVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXX 418
            V  I   F+                 +          +FE  E                
Sbjct: 366 SVQRIFSMFL--NLDECEYRDDDDDEEDAVDESEMAMYDFEGAE-----SPKQSSIFKVS 418

Query: 419 XXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERKR 478
              D YL E+A D +   SKFI+LAE++PD AR   D LYRA+DI+LK HP +  SER R
Sbjct: 419 KLMDSYLAEVALDSSLPPSKFIALAELLPDHARVVCDGLYRAVDIFLKVHPHMKDSERYR 478

Query: 479 LCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQAR 517
           LC+ + CKKLS +A  HAAQNE LP+++ VQVLF+EQ R
Sbjct: 479 LCKTVSCKKLSQDASSHAAQNERLPVQIAVQVLFYEQTR 517


>AT2G30520.3 | Symbols: RPT2 | Phototropic-responsive NPH3 family
           protein | chr2:13002920-13005153 REVERSE LENGTH=545
          Length = 545

 Score =  236 bits (603), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 159/494 (32%), Positives = 248/494 (50%), Gaps = 56/494 (11%)

Query: 46  LLSKCLRLQKLCSESPDSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARC 105
           L++K   ++KL  ES DS   +I  L D PGG E FE  AKFCYG+   ++  N+ A  C
Sbjct: 2   LVAKSNYIRKLIMESKDSDVTRI-NLSDIPGGPEIFEKAAKFCYGVNFEITVQNVAALHC 60

Query: 106 SAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIE 165
           +AE+LQMT++    NL  +   F +   L     +IV L++ + L   S DL I  RC++
Sbjct: 61  AAEFLQMTDKYCDNNLAGRTQDFLSQVALSSLSGAIVVLKSCEILLPISRDLGIVRRCVD 120

Query: 166 AIASKVLSHPTKXXXXXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRT 225
            + +K                        CNE      ++   WW E+L  L +D +   
Sbjct: 121 VVGAKA-----------------------CNEA-MFPCRTPPNWWTEELCILDVDFFSDV 156

Query: 226 MIAIKSGGKVPSNLIGDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRL 285
           + ++K  G  PS+L   A+  Y  + L ++ ++ H  R    SD    D+ S+  S+ R 
Sbjct: 157 VSSMKQRGVKPSSL-ASAIITYTEKSLRDLVRD-HSGRGVKYSDPG--DNESDERSQQRD 212

Query: 286 LLESIVSLLPAEKGAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIP 345
           L++SIVSLLP++KG    +FL  LL+ +  L+ S + K EL  R+ + LE  + +DLLIP
Sbjct: 213 LVQSIVSLLPSDKGLFPVNFLCSLLRCAVFLDTSLTCKNELEKRISVVLEHVSVDDLLIP 272

Query: 346 SLSYTNDTLYDVELVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXX 405
           S +Y  + L D++ V  I+  F+ +                       +N+   F     
Sbjct: 273 SFTYDGERLLDLDSVRRIISAFVEK----------------------EKNVGV-FNGGDF 309

Query: 406 XXXXXXXXXXXXXXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYL 465
                           D YL EIA     ++SKF ++A ++P  AR+  DDLYRAIDI+L
Sbjct: 310 NRGVCSVSLQRVAKTVDSYLAEIATYGDLTISKFNAIANLVPKSARKSDDDLYRAIDIFL 369

Query: 466 KAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQAR----AAAT 521
           KAHP L++ ER+++C  +D  KLS +A +HA+QN+ LP+ +V+  L+++Q +     A  
Sbjct: 370 KAHPNLDEIEREKVCSSMDPLKLSYDARLHASQNKRLPVNIVLHALYYDQLKLRSGVAEQ 429

Query: 522 NGDKVSDLPSNIKT 535
               V  LP  +KT
Sbjct: 430 EERAVVVLPEALKT 443


>AT2G30520.2 | Symbols: RPT2 | Phototropic-responsive NPH3 family
           protein | chr2:13002920-13005153 REVERSE LENGTH=545
          Length = 545

 Score =  236 bits (603), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 159/494 (32%), Positives = 248/494 (50%), Gaps = 56/494 (11%)

Query: 46  LLSKCLRLQKLCSESPDSSPHQIVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARC 105
           L++K   ++KL  ES DS   +I  L D PGG E FE  AKFCYG+   ++  N+ A  C
Sbjct: 2   LVAKSNYIRKLIMESKDSDVTRI-NLSDIPGGPEIFEKAAKFCYGVNFEITVQNVAALHC 60

Query: 106 SAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIE 165
           +AE+LQMT++    NL  +   F +   L     +IV L++ + L   S DL I  RC++
Sbjct: 61  AAEFLQMTDKYCDNNLAGRTQDFLSQVALSSLSGAIVVLKSCEILLPISRDLGIVRRCVD 120

Query: 166 AIASKVLSHPTKXXXXXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRT 225
            + +K                        CNE      ++   WW E+L  L +D +   
Sbjct: 121 VVGAKA-----------------------CNEA-MFPCRTPPNWWTEELCILDVDFFSDV 156

Query: 226 MIAIKSGGKVPSNLIGDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRL 285
           + ++K  G  PS+L   A+  Y  + L ++ ++ H  R    SD    D+ S+  S+ R 
Sbjct: 157 VSSMKQRGVKPSSL-ASAIITYTEKSLRDLVRD-HSGRGVKYSDPG--DNESDERSQQRD 212

Query: 286 LLESIVSLLPAEKGAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIP 345
           L++SIVSLLP++KG    +FL  LL+ +  L+ S + K EL  R+ + LE  + +DLLIP
Sbjct: 213 LVQSIVSLLPSDKGLFPVNFLCSLLRCAVFLDTSLTCKNELEKRISVVLEHVSVDDLLIP 272

Query: 346 SLSYTNDTLYDVELVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXX 405
           S +Y  + L D++ V  I+  F+ +                       +N+   F     
Sbjct: 273 SFTYDGERLLDLDSVRRIISAFVEK----------------------EKNVGV-FNGGDF 309

Query: 406 XXXXXXXXXXXXXXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYL 465
                           D YL EIA     ++SKF ++A ++P  AR+  DDLYRAIDI+L
Sbjct: 310 NRGVCSVSLQRVAKTVDSYLAEIATYGDLTISKFNAIANLVPKSARKSDDDLYRAIDIFL 369

Query: 466 KAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQAR----AAAT 521
           KAHP L++ ER+++C  +D  KLS +A +HA+QN+ LP+ +V+  L+++Q +     A  
Sbjct: 370 KAHPNLDEIEREKVCSSMDPLKLSYDARLHASQNKRLPVNIVLHALYYDQLKLRSGVAEQ 429

Query: 522 NGDKVSDLPSNIKT 535
               V  LP  +KT
Sbjct: 430 EERAVVVLPEALKT 443


>AT1G52770.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:19656009-19657546 FORWARD LENGTH=454
          Length = 454

 Score =  200 bits (508), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/311 (36%), Positives = 174/311 (55%), Gaps = 38/311 (12%)

Query: 210 WGEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNITKNGHVNRKQVASD 269
           W +D   L ID + +T+  IKS G  P +LIG  +  YAS+WLP+++ +  +N       
Sbjct: 28  WFDDGCILGIDYFVKTIAGIKSKGVRP-DLIGSIIVHYASQWLPDLS-DIVLNSDDQQPQ 85

Query: 270 NSDLDSASEITS---KHRLLLESIVSLLPAEKGAVSCSFLLKLLKASNILNASSSSKMEL 326
                 +  +T+   K R  +E+++ ++P E+ +V C FLL+LL+ +N++ A ++ K EL
Sbjct: 86  PQQQSESFSVTAFVMKKRSFVETLIGIIPPERDSVPCDFLLRLLRTANMVGADANYKAEL 145

Query: 327 ATRVGLQLEEATGNDLLIPSLSYTNDTLYDVELVMTILEQFMARGQSPPTSPPRSLMTFE 386
             R+  QL++A+  +L+IPS S+T  TL DVEL+  ++++F                  +
Sbjct: 146 EARISWQLDQASLKELMIPSFSHTCGTLLDVELMTRLVKKFAG---------------LD 190

Query: 387 RRRSRSAENINFEFQEXXXXXXXXXXXXXXXXXXXDRYLQEIARDVTFSLSKFISLAEII 446
               +S  ++                         D YL E A D   +LS+FISL E +
Sbjct: 191 NEGVKSGASL------------------IKVAKLVDSYLAEAALDGDLTLSEFISLVEAL 232

Query: 447 PDFARQDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRV 506
           P+ AR   D LYRAID YLKAHP + K ERKRLC ++D  KLSMEA +HAAQN+ LP+R 
Sbjct: 233 PNHARVTEDGLYRAIDTYLKAHPNVTKQERKRLCGLIDSNKLSMEASLHAAQNDRLPVRT 292

Query: 507 VVQVLFFEQAR 517
           ++QVLF EQA+
Sbjct: 293 IIQVLFSEQAK 303


>AT3G15570.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:5270267-5271700 REVERSE LENGTH=452
          Length = 452

 Score =  192 bits (489), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 113/305 (37%), Positives = 172/305 (56%), Gaps = 40/305 (13%)

Query: 219 IDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNITKN--GHVNRKQVASDNSDLDSA 276
           ++ + +T+  IKS G  P +LIG  +  YAS+WLP+++ N    ++   + S N+  D+ 
Sbjct: 38  MNYFVKTITGIKSKGIRP-DLIGSIIAHYASKWLPDLSGNVSAIISSTSLESKNNHNDTQ 96

Query: 277 SEITS----KHRLLLESIVSLLPAEKGAVSCSFLLKLLKASNILNASSSSKMELATRVGL 332
            E  +    K R  +E+++ +LP EK +V C+FLL+LL+ + ++ A+ +   EL TRV  
Sbjct: 97  PESVTASVMKKRFFVETLIGILPPEKDSVPCNFLLRLLRTAKMVGANPNYLTELETRVSW 156

Query: 333 QLEEATGNDLLIPSLSYTNDTLYDVELVMTILEQFMARGQSPPTSPPRSLMTFERRRSRS 392
           QL++A+  +L+IPS SYT+ TL D+ELV  ++ +F             S +  E  ++ +
Sbjct: 157 QLDQASLKELMIPSFSYTSGTLLDIELVTRLVNKF-------------SGLDSEGVKTAA 203

Query: 393 AENINFEFQEXXXXXXXXXXXXXXXXXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQ 452
           A                            D YL E A D   +L +FISL   +P  AR 
Sbjct: 204 A--------------------LVKVAKLVDSYLAEAAVDGGLALPEFISLITALPSHART 243

Query: 453 DHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLF 512
             D LYRAID YLKAHP++ K ERK LCR++D +KLS EA +HAAQN+ LP+R ++ VLF
Sbjct: 244 TEDGLYRAIDTYLKAHPQVLKQERKELCRLIDSRKLSPEAALHAAQNDRLPVRAIIGVLF 303

Query: 513 FEQAR 517
            EQ +
Sbjct: 304 TEQTK 308


>AT2G47860.2 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr2:19600465-19602088 FORWARD LENGTH=517
          Length = 517

 Score =  176 bits (445), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/408 (31%), Positives = 191/408 (46%), Gaps = 34/408 (8%)

Query: 112 MTEEVEKGNLIQKLDVFFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKV 171
           MTE++ + NL  + + +    I     +SI  L + + L   +E++ +  R + AIA   
Sbjct: 1   MTEDLSEKNLEARTEAYLKDSIFNDISNSITVLHSCERLLPVAEEINLVGRLVNAIAVNA 60

Query: 172 LSHPTKXXXXXXXXXXXXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRTMIAIKS 231
                                  C   E+ +      WWG  L  L +D + R + A+KS
Sbjct: 61  CKE------QLASGLLKLDQSFSCGVPETAKPCD---WWGRSLPILKLDFFQRVLSAMKS 111

Query: 232 GGKVPSNLIGDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLESIV 291
            G +  ++I D L  YA + L            Q+  + + + S S++  K R++LE++V
Sbjct: 112 KG-LNHDIISDILMSYARKSL------------QIIREPNLVKSDSDLQRKQRIVLEAVV 158

Query: 292 SLLP--AEKGAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSY 349
            LLP  A K ++  SFL  LLK +     S S + +L  R+   L++A   D+LIP+   
Sbjct: 159 GLLPTQANKSSIPISFLSSLLKTAIGSGTSVSCRSDLERRISHLLDQAILEDILIPA--- 215

Query: 350 TNDTLYDVELVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXX 409
               +YD + V  I   F+                 +          +FE  E       
Sbjct: 216 NIGAMYDTDSVQRIFSMFL--NLDECEYRDDDDDEEDAVDESEMAMYDFEGAESPKQSSI 273

Query: 410 XXXXXXXXXXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHP 469
                       D YL E+A D +   SKFI+LAE++PD AR   D LYRA+DI+LK HP
Sbjct: 274 FKVSKLM-----DSYLAEVALDSSLPPSKFIALAELLPDHARVVCDGLYRAVDIFLKVHP 328

Query: 470 ELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQAR 517
            +  SER RLC+ + CKKLS +A  HAAQNE LP+++ VQVLF+EQ R
Sbjct: 329 HMKDSERYRLCKTVSCKKLSQDASSHAAQNERLPVQIAVQVLFYEQTR 376


>AT3G19850.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:6898383-6901157 REVERSE LENGTH=554
          Length = 554

 Score =  161 bits (407), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 213/466 (45%), Gaps = 71/466 (15%)

Query: 68  IVQLPDFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDV 127
           I+++ DFPGG + F+L  +FCYG  I++   N+    CS+ +L+MTE++   NL+ + + 
Sbjct: 51  IIEVEDFPGGSDGFDLVLRFCYGGGISIDVSNVSILHCSSVFLEMTEKLCSSNLLLRTEK 110

Query: 128 FFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKV-----LSHPTKXXXXX 182
           F        W D ++ L++ + + L ++   +  + +  + +K+     +SH        
Sbjct: 111 FLEGMFYWSWNDIVLCLKSCEQVFLHADSYGLVDKLVFGVLAKIPQNSDVSHVFSSSSPS 170

Query: 183 XXXXXXXXXXXXCNETESVRHKSNK-------------GWWGEDLAELSIDLYWRTMIAI 229
                         ET  +R  S+K              WW +D++ L   +  + +  +
Sbjct: 171 SSASASASSQSP--ETAMIRSYSDKRSTSRSFSCRTSNEWWFDDMSILGPKIIEKLINTL 228

Query: 230 KSGGKVPSNLIGDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLES 289
            +  K   +L+   L  +   +L     N   N+ + +                 L   +
Sbjct: 229 GAHDKNNDSLV---LTKFLLHYLKTKVPNKSTNKLEYSG----------------LADTA 269

Query: 290 IVSLLPAEKGAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSY 349
           +  ++ A K A SC  +  +L+  +  + S  S++ L   +G  L++AT +DLLIP+   
Sbjct: 270 VQGVVFAAKTAFSCRKMFWVLRVLSGFSISKESRIGLERVIGEMLDQATLDDLLIPAGGK 329

Query: 350 TNDTLYDVELVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXX 409
               +YDV+LV+ +L+ F+  G +              R  R  + I             
Sbjct: 330 GEKGVYDVDLVIRLLKVFVRIGNTEEGDQ-------NLRMRRIGKLI------------- 369

Query: 410 XXXXXXXXXXXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHP 469
                       D+YL+EI+ D    +SKF+ +AE +PD AR   D LYRAI+IYL++HP
Sbjct: 370 ------------DKYLREISPDQNLKVSKFLEVAESLPDSARDWFDGLYRAINIYLESHP 417

Query: 470 ELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQ 515
           +L+  +R +LCR L+ KKL+++ C   A+N  +P  + VQ L  +Q
Sbjct: 418 KLSSEDRTKLCRCLNYKKLTLDTCKQLAKNPKIPPNIAVQALKSQQ 463


>AT3G03510.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:836340-837707 FORWARD LENGTH=455
          Length = 455

 Score =  150 bits (378), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 193/443 (43%), Gaps = 95/443 (21%)

Query: 81  FELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDS 140
           F L  +FCYG  I LS  NIV+  C A YL+M+++    NL+ K   F    +L  W   
Sbjct: 8   FHLVTRFCYGYKIELSADNIVSVLCIAYYLEMSDDHSSNNLLNKAVTFLEQRVLMSWS-- 65

Query: 141 IVSLQTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXXXXXXXXXXXXXXXXXCNETES 200
               +T KAL + S+ +      ++ +A+  L                          +S
Sbjct: 66  ----ETVKALCICSDKI------LDKLANVGLIEVF---------------------LDS 94

Query: 201 VRHKS-NKGWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWL-PNITKN 258
           +  K+ N     +DL  L + LY   ++ +        NL+      YA+RW+    + +
Sbjct: 95  LIEKALNDTRLLQDLITLPLRLYEPLILEVSKHNVSLENLVASVCN-YANRWVFEKDSGD 153

Query: 259 GHVNRKQVASDNSDLDSASEITSKHRLLLESIVSLLPAEKGAVSCSFLLKLLKASNILNA 318
           G V+R +                  R  +E++  LLP ++G +S  FL K LK S  L A
Sbjct: 154 GSVSRNK------------------REGIEAVERLLPHQRGTISSGFLFKSLKESIFLGA 195

Query: 319 SSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVELVMTILEQFMARGQSPPTSP 378
            S  +     R+  QL+ A   DL I  LS T D  YD+EL+ TIL+ F +    P  S 
Sbjct: 196 CSDCRKGFEVRISNQLDMARAKDLQI--LSPTEDGSYDIELLKTILKSFYSNDSVPDLS- 252

Query: 379 PRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXXXXXDRYLQEIARDVTFSLSK 438
                     R  S   +  EF                        L+  A D    +  
Sbjct: 253 ----------RFVSVARMLEEF-----------------------LLEAAASDAGLRVGT 279

Query: 439 FISLAEIIPDFARQD----HDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACM 494
           F  LAEI    A  D     D +YRAID+YL+ H +L +SE+   CR L CKKLS EAC 
Sbjct: 280 FKELAEIAVA-ASCDVLSYSDGIYRAIDVYLERHRDLIESEKMEACRFLHCKKLSPEACE 338

Query: 495 HAAQNELLPLRVVVQVLFFEQAR 517
           HA++NE LPLR+V+QVLF  Q +
Sbjct: 339 HASKNEKLPLRIVMQVLFVSQMQ 361


>AT1G50280.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:18623857-18626292 REVERSE LENGTH=525
          Length = 525

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/453 (23%), Positives = 187/453 (41%), Gaps = 53/453 (11%)

Query: 69  VQLPDFPGGIEAFELCAKFCY-GITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDV 127
           +++ DFPGG + FEL ++FCY    I +   N+    C + +L M+E+    NL  + + 
Sbjct: 51  IEINDFPGGPDGFELVSRFCYHNGEILIDVSNVSTLYCCSVFLGMSEKFCFSNLFLQTEK 110

Query: 128 FFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXXXXXXXXXX 187
           F        W D +  L+  + +   ++   +  + I A  +K+  +             
Sbjct: 111 FLEEVFYGSWSDIVSCLKNCEQVFFQADSYGLVDKLIFAALNKISQNSDDFSSSSLSSFA 170

Query: 188 XXXXXXXCNET---------ESVRHKSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVPSN 238
                     T          SV    +  WW ED+  LS  +  + ++ I   G   +N
Sbjct: 171 SSLSPEMAKNTSESDGRYISRSVACGRSNEWWFEDMTNLSPKIILKLVMII---GAYKTN 227

Query: 239 LIGDALKIYASRWLPNITKNGHVNRKQVASDNSDLDSASEITSKHRLLLESIVSLLPAEK 298
           +    L  +   +L    +       ++  +  +    ++          ++  ++ A  
Sbjct: 228 IKSLVLTRFLLHYLKTKLQTKSRTTTELMRNKLEYSDLADT---------AVRGVISAGT 278

Query: 299 GAVSCSFLLKLLKASNILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVE 358
              SC  L  +L+  +  + S  S++ L T +G  LE+AT +DLLI +        Y+V+
Sbjct: 279 RTFSCRKLFWILRVLSSFSLSRESRIGLETLIGEMLEQATLDDLLISARGSRESGFYNVD 338

Query: 359 LVMTILEQFMARGQSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXX 418
           LV+ +L+ F+   +          M                                   
Sbjct: 339 LVIRLLKVFVKNREEEEEESRERNM-------------------------------KEIG 367

Query: 419 XXXDRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERKR 478
              D+YL+EI+ D    + KF+ +AE +PD AR   D +YRAIDIYL++HP L   +R  
Sbjct: 368 KLIDKYLREISPDQNLKVPKFLGVAESLPDSARDCFDGVYRAIDIYLQSHPNLTPQDRTE 427

Query: 479 LCRILDCKKLSMEACMHAAQNELLPLRVVVQVL 511
           +CR L+ KKL+ME C   A+N  +P  + ++ L
Sbjct: 428 ICRCLNYKKLTMETCKQLARNPKIPPEIAIEAL 460


>AT5G17580.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:5795302-5797031 FORWARD LENGTH=548
          Length = 548

 Score =  134 bits (337), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 212/521 (40%), Gaps = 80/521 (15%)

Query: 22  VSSEVCSDLIIQVRGTRYLLHKFPLLSKCLRLQKLCSESPDSSPHQIVQLPDFPGGIEAF 81
           +S+   SDL I V+G  + L K  L  +  ++  L   +       I  L D     E F
Sbjct: 1   MSASYVSDLHINVKGVPFHLCKEMLAKRSSKVSSLLERNEIDELRLI--LRDLEVDPETF 58

Query: 82  ELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSI 141
           EL A+FC G     +   IV+  C A YL M EE    NL+ K   F    +   W ++I
Sbjct: 59  ELVARFCNGSEFKFTSDTIVSVLCIAYYLGMNEEQSSNNLLGKASEFLEHRVFPSWSETI 118

Query: 142 VSLQTTKALHLWSEDLEITSRCIEAIASKVLSHPTKXXXXXXXXXXXXXXXXXCNETESV 201
            +L++         D+ +     +++  K    P                    N  E+ 
Sbjct: 119 NALRSGDKSFDKLADVGLVDVFFDSLIEKASYDPRLLGELIK------------NRAETD 166

Query: 202 RHKSNK-------GWWGEDLAELSIDLYWRTMI-AIKSGGKVPSNLIGDALKIYASRWLP 253
            ++ N         W  EDL  + + LY   MI AIKS   +P   I  ++  YA +W+ 
Sbjct: 167 DYRPNPRRRLFVIDWKSEDLITIPLRLYEPFMIRAIKSRS-IPVEYIVLSVCKYAKKWV- 224

Query: 254 NITKNGHVNRKQVASDNSDLDSASEITSKHRLLLESIVSLLPAEKGAVSCSFLLKLLKAS 313
                               D+   ++ + R  +E +  LLP ++G +SC  L + LK S
Sbjct: 225 -------------------FDTEESLSGQKREAIEVVERLLPYQRGLISCELLFESLKHS 265

Query: 314 NILNASSSSKMELATRVGLQLEEATGNDLLIPSLSYTN--DTLYDVELVMTILEQFMARG 371
             L ASS  +     R+  QL+ A   DL I S  Y    +   ++ELV T+++ F    
Sbjct: 266 IWLEASSECQNGFMIRICKQLDMAKSTDLKILSRGYGEKAEGFENIELVKTVVKSFYTYY 325

Query: 372 QSPPTSPPRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXXXXXDRYLQEIARD 431
            +  +      +   +                                  + +L   A +
Sbjct: 326 ANEDSETVSHFVKVAK--------------------------------LSEEFLFLAASE 353

Query: 432 VTFSLSKFISLAEIIPDFAR---QDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKL 488
            +  L  F+ LAE+    ++      D +YRAID++L++H  L +SE+  +C++L+C KL
Sbjct: 354 ASLKLEAFVELAEMTVAVSQGILSYSDGIYRAIDVFLESHRYLTESEKMEVCKVLECGKL 413

Query: 489 SMEACMHAAQNELLPLRVVVQVLFFEQARAAATNGDKVSDL 529
           S E    AA+N+ LPLR+VV VL   Q +   T   ++  +
Sbjct: 414 SQEGFERAAKNQKLPLRIVVNVLCVSQLQIRDTVAKEIKGM 454


>AT3G22104.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:7789814-7792179 FORWARD LENGTH=506
          Length = 506

 Score =  131 bits (329), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 220/482 (45%), Gaps = 76/482 (15%)

Query: 27  CSDLIIQVRGTRYL-LHKFPLLSKCLRLQKLCSESPDSSPHQIVQLPDFPGGIEAFELCA 85
           CSDL + + G + + L+K  + +    L+KL  +S  SS +  V   DFPGG E+FE  +
Sbjct: 5   CSDLEVDINGEQTIFLNKQIICAYSGTLRKLLGKSTSSSGNLKVIFNDFPGGAESFEFVS 64

Query: 86  KFCYGIT-ITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIVSL 144
           +FCY    + + P N+V   C+A+++++T+ +E+     +   ++       W + ++ L
Sbjct: 65  RFCYNDGRVAVMPSNVVFLHCAAKFMEVTKVLEQTEKCMEEIRYW------AWPEVLLCL 118

Query: 145 QTTKALHLWSEDLEITSRCIEAIASKVL----SHPTKXXXXXXXXXXXXXXXXXCNETES 200
           +  + +    E   + ++ ++A+  K+       P+                     TES
Sbjct: 119 KQCQEVETSPEVDSLAAKLMDALVEKLCLTIEMSPSSAGSACSPDSSLFRFSCDSKSTES 178

Query: 201 VRHKSNK-GWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNITKNG 259
            ++ S +  WW +++  LS                  S L+   LK+   R   N+    
Sbjct: 179 FKNCSVRLTWWFDEVLVLS------------------SGLVEMFLKLMVLRKFDNLI--- 217

Query: 260 HVNRKQVASDNSDLDSASEITSKHRLLLESIV-SLLPAEKGAVSCSFLLKLLKASNILNA 318
            ++R           SAS  + + R +LE+I+ +L   ++  V C  L  +L+ +  LN 
Sbjct: 218 -ISRFLFYYQKVKFCSAS--SHEKRKILETIIDTLCVLDRSCVPCKSLFAVLRLALGLNI 274

Query: 319 SSSSKMELATRVGLQLEEATGNDLLIPSLSYTNDTLYDVELVMTILEQFMARGQSPPTSP 378
           + S   +L   +G QL++AT ++LL+PS S ++  LY V LV+   + F+          
Sbjct: 275 NKSCMNKLEVMIGHQLDQATLDNLLVPSPSKSSH-LYYVNLVLRFTKAFL--------DG 325

Query: 379 PRSLMTFERRRSRSAENINFEFQEXXXXXXXXXXXXXXXXXXXDRYLQEIARDVTFSLSK 438
            RS +  ++  S                               D+Y+ E+A D     SK
Sbjct: 326 ARSGLQLKKVSS-----------------------------LIDQYIAEVAPDPCLKPSK 356

Query: 439 FISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQ 498
           F+SL  ++PD AR+ H+D+YRAID+YL+AH      E+  L R L  +KLS E+  H ++
Sbjct: 357 FLSLITLVPDSARESHEDIYRAIDMYLEAHTGTTDGEKLNLIRTLSYEKLSGESRAHISR 416

Query: 499 NE 500
           N+
Sbjct: 417 NQ 418


>AT5G48130.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:19516291-19518450 FORWARD LENGTH=625
          Length = 625

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 10/198 (5%)

Query: 69  VQLP-DFPGGIEAFELCAKFCYGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDV 127
           +++P +FPGG E FE    F YG    + P+NI   RC+A++L+MTE+   GNL ++ D+
Sbjct: 76  IEIPQEFPGGAETFEKIMLFIYGCPTLIHPFNIAGLRCAAQFLEMTEQHSTGNLCERFDL 135

Query: 128 FFNSCILRGWKDSIVSLQTTKALHLWSEDLEITSRCIEAIASKV---LSHPTKXXXXXXX 184
           + N  +L+ W D++V L+  + L  WSEDL I SRCIE++A      +  P +       
Sbjct: 136 YLNQVVLQNWDDTLVVLKKCQDLVPWSEDLLIVSRCIESLAFTACMEILDPERRREKPVI 195

Query: 185 XXXXXXXXXXCNETESVRHKSNKGWWGEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDAL 244
                       E  ++    N+  W +DL +L  + + + + +++  G +    +   +
Sbjct: 196 MLEGMVNQPW--EYTNIERIINQDTWIKDLTDLPFEFFKKIIGSLRRQG-MKERYVSPLV 252

Query: 245 KIYASRWLPNITKNGHVN 262
            +YAS+   ++   G  N
Sbjct: 253 ALYASK---SVIPEGQTN 267



 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 58/94 (61%)

Query: 422 DRYLQEIARDVTFSLSKFISLAEIIPDFARQDHDDLYRAIDIYLKAHPELNKSERKRLCR 481
           D +L  +  D     ++FI L E +P   R+ HD LY A++ +L+ H  +++ E+  +C 
Sbjct: 374 DIFLSRLPYDQEMKTTRFIELIETVPMSFRESHDQLYLAVNAFLQVHTNISQEEKGSICS 433

Query: 482 ILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQ 515
            L+C+KLS EA +   +NE +PLR+VVQ LF +Q
Sbjct: 434 YLNCQKLSQEASLELVKNEKMPLRLVVQALFIQQ 467


>AT3G49900.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:18500635-18502614 REVERSE LENGTH=517
          Length = 517

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)

Query: 454 HDDLYRAIDIYLKAHP-ELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLF 512
           HD LYR +D Y+K H  E+ + E+ ++C  +DC KLS    +HA QN  +PLR +V+ + 
Sbjct: 243 HDLLYRIVDAYVKEHDGEMTEEEKVQICNSIDCDKLSPPLLLHAVQNPKMPLRFIVRAML 302

Query: 513 FEQ 515
            EQ
Sbjct: 303 QEQ 305



 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 11/144 (7%)

Query: 29  DLIIQVRGTRYLLHKFPLLSKCLRLQKLCSESPDSSPHQIVQLPDFPGGIEAFELCAKFC 88
           D+ + V GTR+ LHK PL SK   L++  +       +++   P      E F L A FC
Sbjct: 68  DVFVNVGGTRFHLHKDPL-SKSGYLKRHLT-----GVNELTLSPPLNITAETFSLVAGFC 121

Query: 89  YGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIVSLQTT- 147
           YG  I L+P N+V+ R + E L +TE  + G +   L     S + R    ++  +Q   
Sbjct: 122 YGAHIELTPSNVVSLRIAVEVLLITEADDGGRVRDSLRNLTESYLRRVVFVNVDYIQIVL 181

Query: 148 KALHLWSEDLEITS----RCIEAI 167
           ++  L   + E T+    RC+EA+
Sbjct: 182 RSCLLLLPESETTAFLIGRCVEAL 205


>AT3G49900.2 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:18500635-18502614 REVERSE LENGTH=520
          Length = 520

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 11/144 (7%)

Query: 29  DLIIQVRGTRYLLHKFPLLSKCLRLQKLCSESPDSSPHQIVQLPDFPGGIEAFELCAKFC 88
           D+ + V GTR+ LHK PL SK   L++  +       +++   P      E F L A FC
Sbjct: 68  DVFVNVGGTRFHLHKDPL-SKSGYLKRHLT-----GVNELTLSPPLNITAETFSLVAGFC 121

Query: 89  YGITITLSPYNIVAARCSAEYLQMTEEVEKGNLIQKLDVFFNSCILRGWKDSIVSLQTT- 147
           YG  I L+P N+V+ R + E L +TE  + G +   L     S + R    ++  +Q   
Sbjct: 122 YGAHIELTPSNVVSLRIAVEVLLITEADDGGRVRDSLRNLTESYLRRVVFVNVDYIQIVL 181

Query: 148 KALHLWSEDLEITS----RCIEAI 167
           ++  L   + E T+    RC+EA+
Sbjct: 182 RSCLLLLPESETTAFLIGRCVEAL 205



 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%)

Query: 454 HDDLYRAIDIYLKAH----PELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQ 509
           HD LYR +D Y+K       E+ + E+ ++C  +DC KLS    +HA QN  +PLR +V+
Sbjct: 243 HDLLYRIVDAYVKVKREHDGEMTEEEKVQICNSIDCDKLSPPLLLHAVQNPKMPLRFIVR 302

Query: 510 VLFFEQ 515
            +  EQ
Sbjct: 303 AMLQEQ 308