Miyakogusa Predicted Gene
- Lj2g3v1436930.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1436930.2 tr|G7KHW4|G7KHW4_MEDTR Cyclic nucleotide gated
channel OS=Medicago truncatula GN=MTR_6g072050 PE=4
S,70,3e-19,Voltage-gated potassium channels,NULL; seg,NULL; CYCLIC
NUCLEOTIDE GATED CHANNEL,NULL; VOLTAGE AND L,CUFF.37064.2
(92 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G17700.1 | Symbols: CNBT1, CNGC20, ATCNGC20 | cyclic nucleoti... 99 6e-22
AT3G17690.1 | Symbols: ATCNGC19, CNGC19 | cyclic nucleotide gate... 89 8e-19
AT1G01340.1 | Symbols: ATCNGC10, CNGC10, ACBK1 | cyclic nucleoti... 59 7e-10
AT1G01340.2 | Symbols: CNGC10 | cyclic nucleotide gated channel ... 59 7e-10
AT4G01010.1 | Symbols: ATCNGC13, CNGC13 | cyclic nucleotide-gate... 59 9e-10
AT5G53130.1 | Symbols: CNGC1, ATCNGC1 | cyclic nucleotide gated ... 57 2e-09
AT1G15990.1 | Symbols: ATCNGC7, CNGC7 | cyclic nucleotide gated ... 54 3e-08
AT5G57940.2 | Symbols: ATCNGC5, CNGC5 | cyclic nucleotide gated ... 54 3e-08
AT5G57940.1 | Symbols: ATCNGC5, CNGC5 | cyclic nucleotide gated ... 54 3e-08
AT5G57940.3 | Symbols: ATCNGC5, CNGC5 | cyclic nucleotide gated ... 54 3e-08
AT1G19780.1 | Symbols: ATCNGC8, CNGC8 | cyclic nucleotide gated ... 53 5e-08
AT2G46430.2 | Symbols: ATCNGC3, CNGC3, CNGC3.C | cyclic nucleoti... 53 5e-08
AT2G46430.1 | Symbols: ATCNGC3, CNGC3, CNGC3.C | cyclic nucleoti... 53 5e-08
AT2G23980.1 | Symbols: ATCNGC6, CNGC6 | cyclic nucleotide-gated ... 52 1e-07
AT4G30560.1 | Symbols: ATCNGC9, CNGC9 | cyclic nucleotide gated ... 52 1e-07
AT4G30560.2 | Symbols: CNGC9 | cyclic nucleotide gated channel 9... 51 1e-07
AT4G30360.1 | Symbols: ATCNGC17, CNGC17 | cyclic nucleotide-gate... 49 9e-07
AT2G28260.1 | Symbols: ATCNGC15, CNGC15 | cyclic nucleotide-gate... 48 2e-06
AT5G15410.1 | Symbols: DND1, ATCNGC2, CNGC2 | Cyclic nucleotide-... 47 3e-06
AT5G15410.2 | Symbols: DND1, ATCNGC2, CNGC2 | Cyclic nucleotide-... 47 3e-06
AT2G24610.1 | Symbols: ATCNGC14, CNGC14 | cyclic nucleotide-gate... 45 1e-05
>AT3G17700.1 | Symbols: CNBT1, CNGC20, ATCNGC20 | cyclic
nucleotide-binding transporter 1 | chr3:6049074-6052449
FORWARD LENGTH=764
Length = 764
Score = 99.0 bits (245), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 54/76 (71%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AGNQVPSYF+ EV FTM N+QNFLQALG+R LEM LR RD
Sbjct: 472 QQISTLAGNQVPSYFLGEVFFTMGIIGLGLLLFALLIGNMQNFLQALGKRNLEMTLRRRD 531
Query: 69 VEQWMSHRRLPVDLRR 84
VEQWMSHRRLP +RR
Sbjct: 532 VEQWMSHRRLPDGIRR 547
>AT3G17690.1 | Symbols: ATCNGC19, CNGC19 | cyclic nucleotide gated
channel 19 | chr3:6045382-6048339 FORWARD LENGTH=729
Length = 729
Score = 88.6 bits (218), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 51/76 (67%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AGN PSY V EV FTM N+ NFLQ+L RR++EM LR RD
Sbjct: 439 QQISTLAGNLSPSYSVGEVFFTMGIIGLGLLLFARLIGNMHNFLQSLDRRRMEMMLRKRD 498
Query: 69 VEQWMSHRRLPVDLRR 84
VEQWMSHRRLP D+R+
Sbjct: 499 VEQWMSHRRLPEDIRK 514
>AT1G01340.1 | Symbols: ATCNGC10, CNGC10, ACBK1 | cyclic nucleotide
gated channel 10 | chr1:132414-135118 REVERSE LENGTH=706
Length = 706
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S + N S FV E++F +S N+Q +L++ R+ EM++R R
Sbjct: 345 LRNLSALGQNLQTSKFVGEIIFAISICISGLVLFALLIGNMQKYLESTTVREEEMRVRKR 404
Query: 68 DVEQWMSHRRLPVDLRR 84
D EQWMSHR LP DLR+
Sbjct: 405 DAEQWMSHRMLPEDLRK 421
>AT1G01340.2 | Symbols: CNGC10 | cyclic nucleotide gated channel 10
| chr1:132414-135216 REVERSE LENGTH=711
Length = 711
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S + N S FV E++F +S N+Q +L++ R+ EM++R R
Sbjct: 350 LRNLSALGQNLQTSKFVGEIIFAISICISGLVLFALLIGNMQKYLESTTVREEEMRVRKR 409
Query: 68 DVEQWMSHRRLPVDLRR 84
D EQWMSHR LP DLR+
Sbjct: 410 DAEQWMSHRMLPEDLRK 426
>AT4G01010.1 | Symbols: ATCNGC13, CNGC13 | cyclic nucleotide-gated
channel 13 | chr4:434569-437242 REVERSE LENGTH=696
Length = 696
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S + N S FV E++F +S N+Q +L++ R+ EM++R R
Sbjct: 351 LRNLSALGQNLNTSKFVGEIIFAVSICISGLVLFALLIGNMQKYLESTTVREEEMRVRKR 410
Query: 68 DVEQWMSHRRLPVDLRR 84
D EQWMSHR LP DLR+
Sbjct: 411 DAEQWMSHRMLPDDLRK 427
>AT5G53130.1 | Symbols: CNGC1, ATCNGC1 | cyclic nucleotide gated
channel 1 | chr5:21537830-21540490 REVERSE LENGTH=716
Length = 716
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +S++ N S ++WE+ F + N+Q +LQ+ R EM+++ R
Sbjct: 363 LQNLSSLGQNLKTSTYIWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRR 422
Query: 68 DVEQWMSHRRLPVDLRR 84
D EQWMSHR LP +LR+
Sbjct: 423 DAEQWMSHRLLPENLRK 439
>AT1G15990.1 | Symbols: ATCNGC7, CNGC7 | cyclic nucleotide gated
channel 7 | chr1:5491304-5493772 REVERSE LENGTH=709
Length = 709
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +ST+ S F EVLF+++ N+Q +LQ+L R EM+++ R
Sbjct: 350 LQNLSTLGQGLQTSTFPGEVLFSIAIAIAGLLLFALLIGNMQTYLQSLTVRLEEMRIKRR 409
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWM HR LP +LR
Sbjct: 410 DSEQWMHHRSLPQNLR 425
>AT5G57940.2 | Symbols: ATCNGC5, CNGC5 | cyclic nucleotide gated
channel 5 | chr5:23457116-23460439 FORWARD LENGTH=717
Length = 717
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +ST+ S + E++F++S N+Q +LQ+L R EM+++ R
Sbjct: 375 LQNLSTLGQGLETSTYPMEIIFSISLAISGLILFALLIGNMQTYLQSLTIRLEEMRVKRR 434
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWM HR LP DLR
Sbjct: 435 DSEQWMHHRMLPQDLR 450
>AT5G57940.1 | Symbols: ATCNGC5, CNGC5 | cyclic nucleotide gated
channel 5 | chr5:23457116-23460439 FORWARD LENGTH=717
Length = 717
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +ST+ S + E++F++S N+Q +LQ+L R EM+++ R
Sbjct: 375 LQNLSTLGQGLETSTYPMEIIFSISLAISGLILFALLIGNMQTYLQSLTIRLEEMRVKRR 434
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWM HR LP DLR
Sbjct: 435 DSEQWMHHRMLPQDLR 450
>AT5G57940.3 | Symbols: ATCNGC5, CNGC5 | cyclic nucleotide gated
channel 5 | chr5:23457116-23460439 FORWARD LENGTH=710
Length = 710
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +ST+ S + E++F++S N+Q +LQ+L R EM+++ R
Sbjct: 368 LQNLSTLGQGLETSTYPMEIIFSISLAISGLILFALLIGNMQTYLQSLTIRLEEMRVKRR 427
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWM HR LP DLR
Sbjct: 428 DSEQWMHHRMLPQDLR 443
>AT1G19780.1 | Symbols: ATCNGC8, CNGC8 | cyclic nucleotide gated
channel 8 | chr1:6833885-6836578 REVERSE LENGTH=753
Length = 753
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +ST+ S + EVLF+++ N+Q +LQ+L R EM+++ R
Sbjct: 385 LQNLSTLGQGLQTSTYPGEVLFSIAIAVAGLLLFALLIGNMQTYLQSLTVRLEEMRIKRR 444
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWM HR LP +LR
Sbjct: 445 DSEQWMHHRSLPQNLR 460
>AT2G46430.2 | Symbols: ATCNGC3, CNGC3, CNGC3.C | cyclic nucleotide
gated channel 3 | chr2:19058472-19061273 FORWARD
LENGTH=706
Length = 706
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S + N S F E++F + N+Q +LQ+ R EM+++ R
Sbjct: 354 LRNLSALGQNLKTSAFEGEIIFAIVICISGLVLFALLIGNMQKYLQSTTVRVEEMRVKRR 413
Query: 68 DVEQWMSHRRLPVDLRR 84
D EQWMSHR LP DLR+
Sbjct: 414 DAEQWMSHRMLPDDLRK 430
>AT2G46430.1 | Symbols: ATCNGC3, CNGC3, CNGC3.C | cyclic nucleotide
gated channel 3 | chr2:19058472-19061273 FORWARD
LENGTH=706
Length = 706
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S + N S F E++F + N+Q +LQ+ R EM+++ R
Sbjct: 354 LRNLSALGQNLKTSAFEGEIIFAIVICISGLVLFALLIGNMQKYLQSTTVRVEEMRVKRR 413
Query: 68 DVEQWMSHRRLPVDLRR 84
D EQWMSHR LP DLR+
Sbjct: 414 DAEQWMSHRMLPDDLRK 430
>AT2G23980.1 | Symbols: ATCNGC6, CNGC6 | cyclic nucleotide-gated
channel 6 | chr2:10201276-10204011 REVERSE LENGTH=747
Length = 747
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +ST+ S + EV+F+++ N+Q +LQ+L R EM+++ R
Sbjct: 391 LQNLSTLGQGLETSTYPGEVIFSITLAIAGLLLFALLIGNMQTYLQSLTIRLEEMRVKRR 450
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWM HR LP +LR
Sbjct: 451 DSEQWMHHRMLPPELR 466
>AT4G30560.1 | Symbols: ATCNGC9, CNGC9 | cyclic nucleotide gated
channel 9 | chr4:14926974-14929681 REVERSE LENGTH=733
Length = 733
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +ST+ S + EV+F+++ N+Q +LQ+L R EM+++ R
Sbjct: 390 LQNLSTLGQGLETSTYPGEVIFSIALAIAGLLLFALLIGNMQTYLQSLTIRLEEMRVKRR 449
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWM HR LP +LR
Sbjct: 450 DSEQWMHHRMLPPELR 465
>AT4G30560.2 | Symbols: CNGC9 | cyclic nucleotide gated channel 9 |
chr4:14926974-14929455 REVERSE LENGTH=707
Length = 707
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +ST+ S + EV+F+++ N+Q +LQ+L R EM+++ R
Sbjct: 364 LQNLSTLGQGLETSTYPGEVIFSIALAIAGLLLFALLIGNMQTYLQSLTIRLEEMRVKRR 423
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWM HR LP +LR
Sbjct: 424 DSEQWMHHRMLPPELR 439
>AT4G30360.1 | Symbols: ATCNGC17, CNGC17 | cyclic nucleotide-gated
channel 17 | chr4:14855060-14857779 REVERSE LENGTH=720
Length = 720
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+QQ+S+ N + F+ E F + N+Q +LQ+L R E +L+ R
Sbjct: 358 LQQLSSYGQNLSTTMFMGETTFAVLIAIFGLVLFAHLIGNMQTYLQSLTVRLEEWRLKKR 417
Query: 68 DVEQWMSHRRLPVDLR 83
D E+WM HR+LP +LR
Sbjct: 418 DTEEWMRHRQLPEELR 433
>AT2G28260.1 | Symbols: ATCNGC15, CNGC15 | cyclic nucleotide-gated
channel 15 | chr2:12049989-12052453 FORWARD LENGTH=678
Length = 678
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S++ N S + E+LF + N+Q +LQ+ R E ++R
Sbjct: 348 LKNLSSLGQNLATSTYAGEILFAIIIATLGLVLFALLIGNMQTYLQSTTMRLEEWRIRRT 407
Query: 68 DVEQWMSHRRLPVDLRR 84
D EQWM HR+LP +LR+
Sbjct: 408 DTEQWMHHRQLPPELRQ 424
>AT5G15410.1 | Symbols: DND1, ATCNGC2, CNGC2 | Cyclic
nucleotide-regulated ion channel family protein |
chr5:5003460-5006763 REVERSE LENGTH=726
Length = 726
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+ +ST A + P+ EV+F++ NIQ FL A+ +K +MQ+R R
Sbjct: 408 LMTLSTFANDLEPTSNWLEVIFSIVMVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQIRCR 467
Query: 68 DVEQWMSHRRLPVDLRR 84
D+E WM R+LP LR+
Sbjct: 468 DMEWWMKRRQLPSRLRQ 484
>AT5G15410.2 | Symbols: DND1, ATCNGC2, CNGC2 | Cyclic
nucleotide-regulated ion channel family protein |
chr5:5003460-5006512 REVERSE LENGTH=725
Length = 725
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+ +ST A + P+ EV+F++ NIQ FL A+ +K +MQ+R R
Sbjct: 407 LMTLSTFANDLEPTSNWLEVIFSIVMVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQIRCR 466
Query: 68 DVEQWMSHRRLPVDLRR 84
D+E WM R+LP LR+
Sbjct: 467 DMEWWMKRRQLPSRLRQ 483
>AT2G24610.1 | Symbols: ATCNGC14, CNGC14 | cyclic nucleotide-gated
channel 14 | chr2:10457105-10460351 FORWARD LENGTH=726
Length = 726
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 1 MENYLNLM----QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALG 56
+E YL + Q +S+ N S V E +F + N+Q +LQ++
Sbjct: 347 LEKYLYCLWFGLQNLSSYGQNLSTSTSVLETMFAILVAIFGLVLFALLIGNMQTYLQSIT 406
Query: 57 RRKLEMQLRGRDVEQWMSHRRLPVDLR 83
R E +L+ RD E+WM HR LP +LR
Sbjct: 407 VRLEEWRLKRRDTEEWMGHRLLPQNLR 433