Miyakogusa Predicted Gene

Lj2g3v1414880.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1414880.2 Non Chatacterized Hit- tr|K3Y2U2|K3Y2U2_SETIT
Uncharacterized protein OS=Setaria italica GN=Si008523,31.9,8e-17,
,CUFF.36978.2
         (246 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G60460.2 | Symbols:  | unknown protein; Has 35333 Blast hits ...   182   2e-46
AT1G60460.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   182   2e-46
AT1G60460.3 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   181   3e-46

>AT1G60460.2 | Symbols:  | unknown protein; Has 35333 Blast hits to
           34131 proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr1:22275610-22278565 FORWARD LENGTH=462
          Length = 462

 Score =  182 bits (461), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 99/224 (44%), Positives = 128/224 (57%), Gaps = 7/224 (3%)

Query: 2   KNGAIFSGTEVCLSPIISLDLLVAEIHSFVQKNVAIQLVAEDCDVL-------GSRYEKV 54
           KNGA FSGTEV LS   S+D+LVA I  F QK + +Q++    D++       G++ + V
Sbjct: 106 KNGAKFSGTEVSLSVFGSMDVLVAPIIGFFQKIIVLQILNVTLDLMVKQGTSPGNQTQYV 165

Query: 55  FPANMCNDLSIPAANLERLMSGLEDYVLKHGNNLSDKCNSCFPSWETLKVGSGVVCCTEN 114
           F  N        A+NLERL SGLEDYVL+H N L   C+ CF   E LKVGSG VC  + 
Sbjct: 166 FAVNADKTPCFTASNLERLKSGLEDYVLRHANCLDTMCDYCFSDREHLKVGSGTVCQEDK 225

Query: 115 RLHTELVMEAVIILSNISIQNTTCLREYGDKTEVLYFKDFSPCTMSQSSMKALKGIGWKR 174
                  ME VI++S++      C R    KTEVLYF +F P  +   ++ ALK I WK+
Sbjct: 226 HKRVGGTMEVVIVISDLLESTQHCSRSCNGKTEVLYFDNFLPSPVPHLALSALKKIDWKK 285

Query: 175 YGLHLGGIVEKDGFAILEWENLPSDTHIDIVLHSYHKQYPALDR 218
           YGL L  + ++DG   LEW+N PS   I I LH YH QYP   +
Sbjct: 286 YGLILANVNDQDGHVFLEWDNFPSYVQIQIALHWYHNQYPTRQK 329


>AT1G60460.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 6 plant structures; EXPRESSED
           DURING: petal differentiation and expansion stage, E
           expanded cotyledon stage, D bilateral stage; Has 23
           Blast hits to 23 proteins in 8 species: Archae - 0;
           Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23;
           Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
           | chr1:22275600-22278886 FORWARD LENGTH=493
          Length = 493

 Score =  182 bits (461), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 99/224 (44%), Positives = 128/224 (57%), Gaps = 7/224 (3%)

Query: 2   KNGAIFSGTEVCLSPIISLDLLVAEIHSFVQKNVAIQLVAEDCDVL-------GSRYEKV 54
           KNGA FSGTEV LS   S+D+LVA I  F QK + +Q++    D++       G++ + V
Sbjct: 117 KNGAKFSGTEVSLSVFGSMDVLVAPIIGFFQKIIVLQILNVTLDLMVKQGTSPGNQTQYV 176

Query: 55  FPANMCNDLSIPAANLERLMSGLEDYVLKHGNNLSDKCNSCFPSWETLKVGSGVVCCTEN 114
           F  N        A+NLERL SGLEDYVL+H N L   C+ CF   E LKVGSG VC  + 
Sbjct: 177 FAVNADKTPCFTASNLERLKSGLEDYVLRHANCLDTMCDYCFSDREHLKVGSGTVCQEDK 236

Query: 115 RLHTELVMEAVIILSNISIQNTTCLREYGDKTEVLYFKDFSPCTMSQSSMKALKGIGWKR 174
                  ME VI++S++      C R    KTEVLYF +F P  +   ++ ALK I WK+
Sbjct: 237 HKRVGGTMEVVIVISDLLESTQHCSRSCNGKTEVLYFDNFLPSPVPHLALSALKKIDWKK 296

Query: 175 YGLHLGGIVEKDGFAILEWENLPSDTHIDIVLHSYHKQYPALDR 218
           YGL L  + ++DG   LEW+N PS   I I LH YH QYP   +
Sbjct: 297 YGLILANVNDQDGHVFLEWDNFPSYVQIQIALHWYHNQYPTRQK 340


>AT1G60460.3 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 6 plant structures; EXPRESSED
           DURING: petal differentiation and expansion stage, E
           expanded cotyledon stage, D bilateral stage; Has 35333
           Blast hits to 34131 proteins in 2444 species: Archae -
           798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
           Plants - 531; Viruses - 0; Other Eukaryotes - 9610
           (source: NCBI BLink). | chr1:22275600-22278565 FORWARD
           LENGTH=473
          Length = 473

 Score =  181 bits (460), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 99/224 (44%), Positives = 128/224 (57%), Gaps = 7/224 (3%)

Query: 2   KNGAIFSGTEVCLSPIISLDLLVAEIHSFVQKNVAIQLVAEDCDVL-------GSRYEKV 54
           KNGA FSGTEV LS   S+D+LVA I  F QK + +Q++    D++       G++ + V
Sbjct: 117 KNGAKFSGTEVSLSVFGSMDVLVAPIIGFFQKIIVLQILNVTLDLMVKQGTSPGNQTQYV 176

Query: 55  FPANMCNDLSIPAANLERLMSGLEDYVLKHGNNLSDKCNSCFPSWETLKVGSGVVCCTEN 114
           F  N        A+NLERL SGLEDYVL+H N L   C+ CF   E LKVGSG VC  + 
Sbjct: 177 FAVNADKTPCFTASNLERLKSGLEDYVLRHANCLDTMCDYCFSDREHLKVGSGTVCQEDK 236

Query: 115 RLHTELVMEAVIILSNISIQNTTCLREYGDKTEVLYFKDFSPCTMSQSSMKALKGIGWKR 174
                  ME VI++S++      C R    KTEVLYF +F P  +   ++ ALK I WK+
Sbjct: 237 HKRVGGTMEVVIVISDLLESTQHCSRSCNGKTEVLYFDNFLPSPVPHLALSALKKIDWKK 296

Query: 175 YGLHLGGIVEKDGFAILEWENLPSDTHIDIVLHSYHKQYPALDR 218
           YGL L  + ++DG   LEW+N PS   I I LH YH QYP   +
Sbjct: 297 YGLILANVNDQDGHVFLEWDNFPSYVQIQIALHWYHNQYPTRQK 340