Miyakogusa Predicted Gene
- Lj2g3v1414880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1414880.1 tr|Q0D9M7|Q0D9M7_ORYSJ Os06g0708200 protein
OS=Oryza sativa subsp. japonica GN=Os06g0708200 PE=4
SV=,45.45,0.000000002,seg,NULL,CUFF.36978.1
(364 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G60460.3 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 262 3e-70
AT1G60460.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 262 3e-70
AT1G60460.2 | Symbols: | unknown protein; Has 35333 Blast hits ... 248 5e-66
>AT1G60460.3 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: petal differentiation and expansion stage, E
expanded cotyledon stage, D bilateral stage; Has 35333
Blast hits to 34131 proteins in 2444 species: Archae -
798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink). | chr1:22275600-22278565 FORWARD
LENGTH=473
Length = 473
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 190/336 (56%), Gaps = 3/336 (0%)
Query: 4 SSVQKLCLHLISLAYRRCRLSEQICXXXXXXXXXXXXXXXXX-XXXXDTGIGSCLEEFQE 62
+ V KL L LIS A++RCRL+E +C DTGIG LEEFQ
Sbjct: 5 APVPKLLLQLISSAFQRCRLAEDLCRLSVLLDQSTERDPPITCISIADTGIGCNLEEFQN 64
Query: 63 LRFSST-DVADNWDGVLSIKTTSISDTEIYNYQINLKGS-GSSRITRLPSDMKNGAIFSG 120
LR + A WDG+LS+KTT +D E+Y Y INL + R+ R PS KNGA FSG
Sbjct: 65 LRCPREFNGAKIWDGLLSVKTTCFTDDEVYYYHINLDEYIANKRLKRQPSQAKNGAKFSG 124
Query: 121 TEVCLSPIISLDLLVAEIHSFVQKMLVLRIPNVAIQLVAEDCDVLGSRYEKVFPANMCND 180
TEV LS S+D+LVA I F QK++VL+I NV + L+ + G++ + VF N
Sbjct: 125 TEVSLSVFGSMDVLVAPIIGFFQKIIVLQILNVTLDLMVKQGTSPGNQTQYVFAVNADKT 184
Query: 181 LSIPAANLERLMSGLEDYVLKHGNNLSDKCNSCFPSWETLKVGSGVVCCTENRLHTELVM 240
A+NLERL SGLEDYVL+H N L C+ CF E LKVGSG VC + M
Sbjct: 185 PCFTASNLERLKSGLEDYVLRHANCLDTMCDYCFSDREHLKVGSGTVCQEDKHKRVGGTM 244
Query: 241 EAVIILSNISIQNTTCLREYGDKTEVLYFKDFSPCTMSQSSMKALKGIGWKRYGLHLGGI 300
E VI++S++ C R KTEVLYF +F P + ++ ALK I WK+YGL L +
Sbjct: 245 EVVIVISDLLESTQHCSRSCNGKTEVLYFDNFLPSPVPHLALSALKKIDWKKYGLILANV 304
Query: 301 VEKDGFAILEWENLPSDTHIDIVLHSYHKQYPALDR 336
++DG LEW+N PS I I LH YH QYP +
Sbjct: 305 NDQDGHVFLEWDNFPSYVQIQIALHWYHNQYPTRQK 340
>AT1G60460.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: petal differentiation and expansion stage, E
expanded cotyledon stage, D bilateral stage; Has 23
Blast hits to 23 proteins in 8 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:22275600-22278886 FORWARD LENGTH=493
Length = 493
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 190/336 (56%), Gaps = 3/336 (0%)
Query: 4 SSVQKLCLHLISLAYRRCRLSEQICXXXXXXXXXXXXXXXXX-XXXXDTGIGSCLEEFQE 62
+ V KL L LIS A++RCRL+E +C DTGIG LEEFQ
Sbjct: 5 APVPKLLLQLISSAFQRCRLAEDLCRLSVLLDQSTERDPPITCISIADTGIGCNLEEFQN 64
Query: 63 LRFSST-DVADNWDGVLSIKTTSISDTEIYNYQINLKGS-GSSRITRLPSDMKNGAIFSG 120
LR + A WDG+LS+KTT +D E+Y Y INL + R+ R PS KNGA FSG
Sbjct: 65 LRCPREFNGAKIWDGLLSVKTTCFTDDEVYYYHINLDEYIANKRLKRQPSQAKNGAKFSG 124
Query: 121 TEVCLSPIISLDLLVAEIHSFVQKMLVLRIPNVAIQLVAEDCDVLGSRYEKVFPANMCND 180
TEV LS S+D+LVA I F QK++VL+I NV + L+ + G++ + VF N
Sbjct: 125 TEVSLSVFGSMDVLVAPIIGFFQKIIVLQILNVTLDLMVKQGTSPGNQTQYVFAVNADKT 184
Query: 181 LSIPAANLERLMSGLEDYVLKHGNNLSDKCNSCFPSWETLKVGSGVVCCTENRLHTELVM 240
A+NLERL SGLEDYVL+H N L C+ CF E LKVGSG VC + M
Sbjct: 185 PCFTASNLERLKSGLEDYVLRHANCLDTMCDYCFSDREHLKVGSGTVCQEDKHKRVGGTM 244
Query: 241 EAVIILSNISIQNTTCLREYGDKTEVLYFKDFSPCTMSQSSMKALKGIGWKRYGLHLGGI 300
E VI++S++ C R KTEVLYF +F P + ++ ALK I WK+YGL L +
Sbjct: 245 EVVIVISDLLESTQHCSRSCNGKTEVLYFDNFLPSPVPHLALSALKKIDWKKYGLILANV 304
Query: 301 VEKDGFAILEWENLPSDTHIDIVLHSYHKQYPALDR 336
++DG LEW+N PS I I LH YH QYP +
Sbjct: 305 NDQDGHVFLEWDNFPSYVQIQIALHWYHNQYPTRQK 340
>AT1G60460.2 | Symbols: | unknown protein; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr1:22275610-22278565 FORWARD LENGTH=462
Length = 462
Score = 248 bits (633), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 140/322 (43%), Positives = 180/322 (55%), Gaps = 3/322 (0%)
Query: 18 YRRCRLSEQICXXXXXXXXXXXXXXXXX-XXXXDTGIGSCLEEFQELRFSST-DVADNWD 75
+ +CRL+E +C DTGIG LEEFQ LR + A WD
Sbjct: 8 FYKCRLAEDLCRLSVLLDQSTERDPPITCISIADTGIGCNLEEFQNLRCPREFNGAKIWD 67
Query: 76 GVLSIKTTSISDTEIYNYQINLKGS-GSSRITRLPSDMKNGAIFSGTEVCLSPIISLDLL 134
G+LS+KTT +D E+Y Y INL + R+ R PS KNGA FSGTEV LS S+D+L
Sbjct: 68 GLLSVKTTCFTDDEVYYYHINLDEYIANKRLKRQPSQAKNGAKFSGTEVSLSVFGSMDVL 127
Query: 135 VAEIHSFVQKMLVLRIPNVAIQLVAEDCDVLGSRYEKVFPANMCNDLSIPAANLERLMSG 194
VA I F QK++VL+I NV + L+ + G++ + VF N A+NLERL SG
Sbjct: 128 VAPIIGFFQKIIVLQILNVTLDLMVKQGTSPGNQTQYVFAVNADKTPCFTASNLERLKSG 187
Query: 195 LEDYVLKHGNNLSDKCNSCFPSWETLKVGSGVVCCTENRLHTELVMEAVIILSNISIQNT 254
LEDYVL+H N L C+ CF E LKVGSG VC + ME VI++S++
Sbjct: 188 LEDYVLRHANCLDTMCDYCFSDREHLKVGSGTVCQEDKHKRVGGTMEVVIVISDLLESTQ 247
Query: 255 TCLREYGDKTEVLYFKDFSPCTMSQSSMKALKGIGWKRYGLHLGGIVEKDGFAILEWENL 314
C R KTEVLYF +F P + ++ ALK I WK+YGL L + ++DG LEW+N
Sbjct: 248 HCSRSCNGKTEVLYFDNFLPSPVPHLALSALKKIDWKKYGLILANVNDQDGHVFLEWDNF 307
Query: 315 PSDTHIDIVLHSYHKQYPALDR 336
PS I I LH YH QYP +
Sbjct: 308 PSYVQIQIALHWYHNQYPTRQK 329