Miyakogusa Predicted Gene

Lj2g3v1402700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1402700.1 tr|A9U357|A9U357_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_101176,43.48,0.0000003,seg,NULL; DUF936,Protein of
unknown function DUF936, plant; FAMILY NOT NAMED,NULL,CUFF.36965.1
         (418 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G23790.1 | Symbols:  | Plant protein of unknown function (DUF...   326   2e-89
AT1G70340.1 | Symbols:  | Plant protein of unknown function (DUF...   291   7e-79
AT1G08760.1 | Symbols:  | Plant protein of unknown function (DUF...   162   6e-40
AT4G13370.1 | Symbols:  | Plant protein of unknown function (DUF...   145   4e-35
AT3G14170.1 | Symbols:  | Plant protein of unknown function (DUF...   143   2e-34
AT3G19610.1 | Symbols:  | Plant protein of unknown function (DUF...   113   3e-25
AT2G31920.1 | Symbols:  | Plant protein of unknown function (DUF...    96   5e-20

>AT1G23790.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr1:8410099-8411917 FORWARD LENGTH=518
          Length = 518

 Score =  326 bits (836), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 198/401 (49%), Positives = 239/401 (59%), Gaps = 61/401 (15%)

Query: 1   MATLAPGILMKLLNGLNTGVKPTSEHRSSLLQVTDIVPADLDEKSLFPKQGFYIKVSDSS 60
           MA LAPGIL KL++G+ TGVKPT EHRSSLLQVTDIVP DLDEK+L PKQGF+IKVSDSS
Sbjct: 1   MAALAPGILQKLIDGMKTGVKPTGEHRSSLLQVTDIVPIDLDEKNLLPKQGFFIKVSDSS 60

Query: 61  HSIYAALPSDQDDIVFSNKMQLGQFIYVDRLEPGSPVPVLKGAKPLPGRHPLVGTPEPLM 120
           HSIY +LPSDQDD V SNKMQLGQFIYVDRL+PG+PVP++KGA+P+PGRHPL+GTPEPLM
Sbjct: 61  HSIYVSLPSDQDDDVLSNKMQLGQFIYVDRLDPGTPVPIIKGARPIPGRHPLLGTPEPLM 120

Query: 121 GLRDKKEAXXXXXXXXXXXXXXXXXXXXXXSWGTAGKNLDENNVSFSSPMVFKPVNLDFD 180
             R K E+                      SWG  G          SSP V KP  LDFD
Sbjct: 121 STRGKIES----------------SRPRRGSWGQNG--------DVSSPFVLKPAPLDFD 156

Query: 181 QFSAAAATPVRDRCA----VPSSPLIXXXXXXXXXXXXXXXXCSVGGGLLAKMTDFKGDS 236
           Q      TP + R      + +SP +                CS GGGLL+KM     +S
Sbjct: 157 Q-----CTPAKHRLGTGRFMAASPNV-----MTRGRSPGGVRCSYGGGLLSKM----AES 202

Query: 237 P-ALLRKSCAVXXXXXXXXXXXXVCEREPV-------TPFKSAEKKSCTPPPRLRNARVA 288
           P A++RKSC V            VC+RE +       +PFKS+ KK+ +PPP +R  R  
Sbjct: 203 PAAMMRKSCVV-PPSSKFPRSKSVCDRETMAKNSVLFSPFKSSAKKNDSPPPSVRTRRAT 261

Query: 289 FIGGDAAQNQDSNVPSHPKSLSTTNSAFDNSNNQSLPKNLPGNLSLLGKEAVQQREVAQK 348
                A+  +D      PKS     S +          +LPG LS L KEA+QQRE AQK
Sbjct: 262 A----ASLLEDER--EAPKS----TSKYSKLEKPEKSLSLPGRLSTLSKEAMQQRETAQK 311

Query: 349 IALQALRDASATEAVVRSLKMFSNLCKSARACFLSGCHNVW 389
           IALQALR+A+ TE VVR LK F+NL KSA+A   + C + +
Sbjct: 312 IALQALREATTTETVVRHLKTFANLSKSAKADCPAACFDKF 352


>AT1G70340.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr1:26504567-26506389 REVERSE LENGTH=510
          Length = 510

 Score =  291 bits (744), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 191/429 (44%), Positives = 239/429 (55%), Gaps = 101/429 (23%)

Query: 1   MATLAPGILMKLLNGLNTGVKPTSEHRSSLLQVTDIVPADLDEKSLFPKQGFYIKVSDSS 60
           MA LAPGIL KL+ G+ TG+KPT EHRSS+LQVTDIVP DLDEKSL PKQGF IK+SDSS
Sbjct: 1   MAALAPGILQKLIQGMKTGIKPTREHRSSMLQVTDIVPIDLDEKSLEPKQGFLIKISDSS 60

Query: 61  HSIYAALPSDQDDIVFSNKMQLGQFIYVDRLEPGSPVPVLKGAKPLPGRHPLVGTPEPLM 120
           HSIY +LPSDQDD+V SNK+QLGQFIYVDRLEPGSPVPV+KGAKP+PGRHPL+GTPE L+
Sbjct: 61  HSIYVSLPSDQDDVVLSNKLQLGQFIYVDRLEPGSPVPVIKGAKPIPGRHPLLGTPETLV 120

Query: 121 GLRDKKEAXXXXXXXXXXXXXXXXXXXXXXSWGTAGKNLDENNVSFSS-PMVFKPVNLDF 179
             +++ +                       SWG         NV FSS P V KP+ L+F
Sbjct: 121 VPKERTD-------------QEIGSKPRRGSWG--------QNVDFSSSPFVVKPMALEF 159

Query: 180 DQFSAA--------AATPVRDRCAVPSSPLIXXXXXXXXXXXXXXXXCSVGGGLLAKMTD 231
           D  + A        AA+P+R R  V                      CS GGG+L K+  
Sbjct: 160 DHSTPAKRSVSARFAASPIR-RGGV---------------------RCSFGGGVLGKL-- 195

Query: 232 FKGDSPA--LLRKSCAVXXXXXXXXXXXXVCEREP-------VTPFKSAEKKSCTPPPRL 282
            +G+SPA  +LRKSC V            VC+R+         +PFKS+           
Sbjct: 196 -EGESPATAMLRKSCFVSSASKFPRSRS-VCDRQAKKNNASLFSPFKSS----------- 242

Query: 283 RNARVAFIGGDAAQNQDSNVPSHPKSLSTTNSAFDNSNNQSLPKNLPGNLSLLGKEAVQQ 342
                        + Q+  VP     LST+       +      NL G L++L KEA Q 
Sbjct: 243 ------------LEAQEDVVP-----LSTSKKIKPEKDT-----NLSGRLNILSKEATQL 280

Query: 343 REVAQKIALQALRDASATEAVVRSLKMFSNLCKSARACFLSGCHNVWEKPLEPMLLLPVL 402
           REVAQK+ALQALR+A+ TE VVR  K F+NL KSA+A   + C   +EK +E    +   
Sbjct: 281 REVAQKVALQALREATITEIVVRHTKTFTNLSKSAKADCPAVC---FEKFMEFHQQMAQT 337

Query: 403 NGFWSSIKI 411
            G  +SI++
Sbjct: 338 IGELTSIEV 346


>AT1G08760.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr1:2805478-2808409 FORWARD LENGTH=748
          Length = 748

 Score =  162 bits (409), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 73/121 (60%), Positives = 93/121 (76%), Gaps = 1/121 (0%)

Query: 1   MATLAPGILMKLLNGLNTGVKPTSEHRSSLLQVTDIVPADLDEKSLFPKQGFYIKVSDSS 60
           MA L PG+L+KLL  +NT VK   EHRSSLLQV  IVPA L    LFP QGFY+KVSDSS
Sbjct: 1   MANLVPGVLLKLLQHMNTDVKIAGEHRSSLLQVISIVPA-LAGGELFPNQGFYLKVSDSS 59

Query: 61  HSIYAALPSDQDDIVFSNKMQLGQFIYVDRLEPGSPVPVLKGAKPLPGRHPLVGTPEPLM 120
           H+ Y +LP + DD++ S+K+QLGQ+I+VDR+E  SPVP+L+G +P+PGRHP VG PE ++
Sbjct: 60  HATYVSLPDEHDDLILSDKIQLGQYIHVDRVESSSPVPILRGVRPVPGRHPCVGDPEDIV 119

Query: 121 G 121
            
Sbjct: 120 A 120



 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 42/52 (80%)

Query: 327 NLPGNLSLLGKEAVQQREVAQKIALQALRDASATEAVVRSLKMFSNLCKSAR 378
           +LP +LS +G+E ++ RE AQ +A++AL++ASA+E++++ L M+S+L  +A+
Sbjct: 419 SLPPSLSRMGQEVLRHREAAQVVAIEALQEASASESLLQCLIMYSDLLSTAK 470


>AT4G13370.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr4:7777916-7780334 REVERSE LENGTH=673
          Length = 673

 Score =  145 bits (367), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 66/121 (54%), Positives = 90/121 (74%), Gaps = 1/121 (0%)

Query: 1   MATLAPGILMKLLNGLNTGVKPTSEHRSSLLQVTDIVPADLDEKSLFPKQGFYIKVSDSS 60
           MA+LAPGIL+KLL  +N+G +PT +HRS++LQVT IVPA L    L+P QGFY+++SDS 
Sbjct: 1   MASLAPGILLKLLQCMNSGTRPTGDHRSAILQVTGIVPA-LAGSDLWPNQGFYVQISDSL 59

Query: 61  HSIYAALPSDQDDIVFSNKMQLGQFIYVDRLEPGSPVPVLKGAKPLPGRHPLVGTPEPLM 120
           +S Y +L     D++ SN++QLGQFIY++RLE  +PVP   G +P+ GRH  VG PEPL+
Sbjct: 60  NSTYVSLSERDTDLILSNRLQLGQFIYLERLEFATPVPRAAGIRPVAGRHAFVGKPEPLI 119

Query: 121 G 121
            
Sbjct: 120 A 120


>AT3G14170.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr3:4696115-4697989 REVERSE LENGTH=505
          Length = 505

 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 90/122 (73%), Gaps = 1/122 (0%)

Query: 1   MATLAPGILMKLLNGLNTGVKPTSEHRSSLLQVTDIVPADLDEKSLFPKQGFYIKVSDSS 60
           MA+L P +L+KLL  +NT +K   E+RS LLQV  IVPA L    L+P QGF+IKVSDSS
Sbjct: 1   MASLTPRVLIKLLETMNTNIKVRGEYRSVLLQVISIVPA-LAGSELWPNQGFFIKVSDSS 59

Query: 61  HSIYAALPSDQDDIVFSNKMQLGQFIYVDRLEPGSPVPVLKGAKPLPGRHPLVGTPEPLM 120
           HS Y +L ++ ++++ +NK+ +GQF YVD+L+ G+PVPVL G +P+ GRHP VG P+ LM
Sbjct: 60  HSTYVSLSNEDNELILNNKLGIGQFFYVDKLDAGTPVPVLVGVRPISGRHPFVGNPKDLM 119

Query: 121 GL 122
            +
Sbjct: 120 QM 121


>AT3G19610.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr3:6812493-6814660 REVERSE LENGTH=640
          Length = 640

 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 81/121 (66%), Gaps = 2/121 (1%)

Query: 1   MATLAPGILMKLLNGLNTG-VKPTSEHRSSLLQVTDIVPADLDEKSLFPKQGFYIKVSDS 59
           MA L  G+L KLL  +  G V+   +HR  LLQ+  I+P  L    L+P +GF+++++DS
Sbjct: 29  MAELRSGVLFKLLEEMGVGKVRRDVDHRPVLLQIRCIIPV-LAAGGLWPNKGFFLRITDS 87

Query: 60  SHSIYAALPSDQDDIVFSNKMQLGQFIYVDRLEPGSPVPVLKGAKPLPGRHPLVGTPEPL 119
           +HSIY +LP +++D+V  +K+Q+GQ I+V++LE   PVP++KG +P PGR    G P  L
Sbjct: 88  THSIYVSLPREENDLVLYDKLQIGQLIFVEKLEFAYPVPMIKGIRPTPGRRACTGDPIDL 147

Query: 120 M 120
           +
Sbjct: 148 I 148


>AT2G31920.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr2:13574053-13576367 REVERSE LENGTH=585
          Length = 585

 Score = 95.9 bits (237), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/127 (43%), Positives = 78/127 (61%), Gaps = 10/127 (7%)

Query: 1   MATLAPGILMKLLN----GLNTGVKPTSEHRSSLLQVTDIVPADLDEKSLFPKQGFYIKV 56
           MA+L PG+L  LLN       +     S HRS LLQV +IVP   D++  +  + F++KV
Sbjct: 1   MASLTPGVLSNLLNIAAGNSPSSPPLLSSHRSPLLQVIEIVPCLSDDQ--WRSEAFFVKV 58

Query: 57  SDSSHSIYAALPSDQD-DIVFSNKMQLGQFIYVD---RLEPGSPVPVLKGAKPLPGRHPL 112
           SDS H+ Y A+ +  D D++ S+++QLGQFIY+     +E G PVPV++G KP+P R   
Sbjct: 59  SDSLHAAYVAVSTGDDADLIRSDEIQLGQFIYICGGLHVEKGCPVPVIRGLKPVPKRRMC 118

Query: 113 VGTPEPL 119
           VG P  L
Sbjct: 119 VGNPSDL 125