Miyakogusa Predicted Gene

Lj2g3v1373350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1373350.1 tr|G4P3S7|G4P3S7_BACIU YuxK OS=Bacillus subtilis
subsp. subtilis str. RO-NN-1 GN=I33_3242 PE=4
SV=1,37.4,3e-19,seg,NULL; DUF393,Putative thiol-disulphide
oxidoreductase DCC,CUFF.36856.1
         (202 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G24095.1 | Symbols:  | Putative thiol-disulphide oxidoreducta...   206   6e-54
AT1G52590.1 | Symbols:  | Putative thiol-disulphide oxidoreducta...    57   1e-08

>AT1G24095.1 | Symbols:  | Putative thiol-disulphide oxidoreductase
           DCC | chr1:8523345-8524690 FORWARD LENGTH=213
          Length = 213

 Score =  206 bits (525), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 95/150 (63%), Positives = 112/150 (74%)

Query: 49  LKTVNPTLLQPRVVLYDGVCHLCHRGVKWVIRADKDRKIKFCCVQSNAAEPYLRACGLEQ 108
           +  + P  LQPRVV+YDGVCHLCH GVKW+I+ADK RKIKFCC+QS AAEPYL   G+ +
Sbjct: 63  IPVIMPGNLQPRVVVYDGVCHLCHGGVKWIIKADKYRKIKFCCLQSKAAEPYLEVSGVTR 122

Query: 109 EDVLRRFLFVEGLNVFSQGSTAALRXXXXXXXXXXXXXXXXXXXTPIRDAVYDYVAKQRY 168
           EDV +RFLF+EGL  + Q STAALR                   TP+RD+VYDYVAK RY
Sbjct: 123 EDVQKRFLFIEGLGFYHQASTAALRVVSYLPLPYSALNAFSIVPTPLRDSVYDYVAKNRY 182

Query: 169 EWFGKAEDCLVLQEKELLERFIDREELMNR 198
           +WFGKAEDCLVL +KELLERFIDR+EL+NR
Sbjct: 183 DWFGKAEDCLVLNDKELLERFIDRDELINR 212


>AT1G52590.1 | Symbols:  | Putative thiol-disulphide oxidoreductase
           DCC | chr1:19589224-19590231 REVERSE LENGTH=172
          Length = 172

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 5/119 (4%)

Query: 61  VVLYDGVCHLCHRGVKWVIRADKDRKIKFCCVQSNAAEPYLRACGLEQEDVLRRFLFVEG 120
           ++L+DGVC+LC+ GVK+V   D++R I+F  +QS A +  L   G   +D+    + VE 
Sbjct: 55  IMLFDGVCNLCNGGVKFVRDHDRNRSIRFEALQSEAGKKLLLRSGRAPDDI-SSVVLVE- 112

Query: 121 LNVFSQGSTAALRXXXXXXXXXXXXXXXXXXXTP--IRDAVYDYVAKQRYEWFGKAEDC 177
            N  S   + A+                     P  +RD +Y+ VA  RY  FG+++ C
Sbjct: 113 -NDRSYIKSEAVLKIMKYIDLPFPQLAFFLQFAPLFVRDFLYENVANNRYAMFGRSDSC 170