Miyakogusa Predicted Gene

Lj2g3v1349460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1349460.1 tr|G7K8A8|G7K8A8_MEDTR Tetratricopeptide repeat
protein OS=Medicago truncatula GN=MTR_5g037400 PE=4 ,78.54,0,no
description,Tetratricopeptide-like helical; TPR-like,NULL; seg,NULL;
SUBFAMILY NOT NAMED,NULL; FA,CUFF.36827.1
         (473 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G27150.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   550   e-157
AT1G27110.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   507   e-144
AT1G27110.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   480   e-135
AT1G27110.3 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   402   e-112

>AT1G27150.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:9429177-9432068 FORWARD
           LENGTH=468
          Length = 468

 Score =  550 bits (1418), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 265/465 (56%), Positives = 344/465 (73%), Gaps = 1/465 (0%)

Query: 9   TVKLDSCGYEIITSSQACLSAINSYYHQVLIYGRKRSVILEAVGHDQNCVLANTLAAHFV 68
           TV+    GYE+ TSS AC+ AINSY+ QVL YGRKR VILEA  +D++CVL + LAAHF+
Sbjct: 4   TVRCVRWGYEVNTSSDACIDAINSYFQQVLSYGRKRKVILEAPLYDKDCVLGSILAAHFL 63

Query: 69  YPPASSRARPYLDAANSFLEHATLYEKLVFDTISYLVSEDRDDDVAIQLHSKLLEEFPRD 128
                SRA  Y++AA S LE +T YEK V++ ++YL+SEDRDDD+A ++H+KLL+ FP+D
Sbjct: 64  SSSDPSRANSYVEAAASNLEQSTPYEKAVYEAVTYLISEDRDDDLAFEMHTKLLKRFPKD 123

Query: 129 LVSLKRAQVLCFYMGRPDLSLSLVHQVLPQNEGQNYIYGMLAFPLLELGQMKDAEKAAQR 188
           L SLKRAQ+L FYMG+PD  L LV QVLP N+ ++YI+G+LAFPLLELG+M++A  A+++
Sbjct: 124 LASLKRAQLLSFYMGQPDPFLGLVQQVLPANQEESYIHGLLAFPLLELGRMEEAAAASRK 183

Query: 189 GFEINKQDIWSHHGLCHVLQYECRFKEAIQFMEECXXXXXXXXXFMLTHNWWHVALCYLE 248
           G+EINK+D W+HH LCHVLQ+ECRFKEA++FME           FM THNWWHVALCYLE
Sbjct: 184 GYEINKEDAWAHHCLCHVLQHECRFKEAVEFMEALAGTWPSCSSFMYTHNWWHVALCYLE 243

Query: 249 GNAPLQRVLEIYDNYIWKELDKTDTGSAEVYLNAVALLLRLCVRDELDMLGDRLKILAEC 308
           G +P+ +V EIYD++IWKEL+K D    EVYLNA+ LL+RL VRD LD   DRLK LA  
Sbjct: 244 GGSPMSKVEEIYDHHIWKELEKDDAVPPEVYLNALGLLIRLDVRDALDGFEDRLKNLAVR 303

Query: 309 LTDQANWYMEWHLDVLTVWALAKTGEIYKAEDLLKGLRDRVSRMTXXXXXXXXXXXXXAE 368
           LT+QANWY+EWHLD+L VWALAK GE  +A +LL+GL+ R+S+                E
Sbjct: 304 LTNQANWYLEWHLDILIVWALAKVGETSRAHELLEGLKFRLSKKNKKKQQVMQKGIQLGE 363

Query: 369 ALYAYGRGNDKHGVELLGPDFDANDYKIIGASDEQVDVFNDVWYNMLLNSGEAENAIEVI 428
           A+Y Y RGN +  +ELLG +F+A  YKI+GASDEQ+DVFN++W  +LL +G++  A EVI
Sbjct: 364 AVYEYARGNYEKALELLGSEFNAIGYKIVGASDEQIDVFNEMWCQLLLKTGQSSTAKEVI 423

Query: 429 EKRIKKREGIPYTWRLLERGYKLANRPEA-GIASKQAKALESAYF 472
            +RIK R+GIP+ WRLLE+ Y +    EA   A ++AK LES YF
Sbjct: 424 RERIKARDGIPFMWRLLEKSYSMEGNAEAESSARERAKKLESCYF 468


>AT1G27110.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:9413018-9417392 REVERSE
           LENGTH=483
          Length = 483

 Score =  507 bits (1305), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 249/461 (54%), Positives = 331/461 (71%), Gaps = 2/461 (0%)

Query: 14  SCGYEIITSSQACLSAINSYYHQVLIYGRKRSVILEAVGHDQNCVLANTLAAHFVYPPAS 73
           SCGYE+ TSS  C+++INSY  QVL YGR++ VILEA  +D +CVLAN LAAH++     
Sbjct: 20  SCGYEVNTSSDDCIASINSYSDQVLGYGREKKVILEAPNYDNDCVLANILAAHYLSSFDP 79

Query: 74  SRARPYLDAANSFLEHATLYEKLVFDTISYLVSEDRDDDVAIQLHSKLLEEFPRDLVSLK 133
            RAR Y  AA S L  ATLYEK VF+ +SYL+SE+ DDDVA++LHSKLL++FP+DL+S K
Sbjct: 80  VRARSYALAAESRLGKATLYEKAVFEAVSYLLSENMDDDVALELHSKLLKKFPKDLLSWK 139

Query: 134 RAQVLCFYMGRPDLSLSLVHQVLPQNEGQNYIYGMLAFPLLELGQMKDAEKAAQRGFEIN 193
           R + LC YMGR DLSL L  ++LPQNEGQ Y+ GMLAF L+ELG +++AE+AA++G EIN
Sbjct: 140 RVETLCSYMGRHDLSLPLFRKILPQNEGQVYVNGMLAFCLIELGHLREAEEAARKGCEIN 199

Query: 194 KQDIWSHHGLCHVLQYECRFKEAIQFMEECXXXXXXXXXFMLTHNWWHVALCYLEGNAPL 253
           + D W+HH LCHVLQ ECRFKEA++FMEE             +HNWWHVA+CYLEG + +
Sbjct: 200 ENDSWAHHALCHVLQTECRFKEAVKFMEEHSDSWDSCSSLRFSHNWWHVAVCYLEGGSHI 259

Query: 254 QRVLEIYDNYIWKELDKTDTGSAEVYLNAVALLLRLCVRDEL-DMLGDRLKILAECLTDQ 312
            +V E+YD+ +WKEL+K D  + +VY +A+ LLLRL  R +L D   DRL+ LA+ LTD+
Sbjct: 260 SKVEEVYDHQMWKELEKDDAVARDVYTDALGLLLRLDTRGKLDDGFQDRLEKLADSLTDK 319

Query: 313 ANWYMEWHLDVLTVWALAKTGEIYKAEDLLKGLRDRVSRMTXXXXXXXXXXXXXAEALYA 372
           A WY +W  D+ T+WAL+K  +   A +LL+GL+ R S M              AEA+Y 
Sbjct: 320 AMWYQDWLFDITTIWALSKVEKTSLAHELLEGLKSRTSAMNPKKQKLMQKAILLAEAVYE 379

Query: 373 YGRGNDKHGVELLGPDFDANDYKIIGASDEQVDVFNDVWYNMLLNSGEAENAIEVIEKRI 432
           YG+GN +  +ELLG DFDA +YK+IG S  Q+DVFN++WY +LL +G++  AIEV+EK  
Sbjct: 380 YGKGNYEIALELLGLDFDAANYKVIGGSGLQMDVFNEIWYKLLLLNGKSSTAIEVLEKVT 439

Query: 433 KKREGIPYTWRLLERGYKLANRPEAGI-ASKQAKALESAYF 472
           K+R+G P+ WRLLE  Y +  + +AGI A K+AKALES+YF
Sbjct: 440 KQRDGAPFLWRLLEESYSMEGKEKAGISAGKKAKALESSYF 480


>AT1G27110.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:9413071-9417392 REVERSE
           LENGTH=464
          Length = 464

 Score =  480 bits (1235), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 234/433 (54%), Positives = 311/433 (71%), Gaps = 1/433 (0%)

Query: 14  SCGYEIITSSQACLSAINSYYHQVLIYGRKRSVILEAVGHDQNCVLANTLAAHFVYPPAS 73
           SCGYE+ TSS  C+++INSY  QVL YGR++ VILEA  +D +CVLAN LAAH++     
Sbjct: 20  SCGYEVNTSSDDCIASINSYSDQVLGYGREKKVILEAPNYDNDCVLANILAAHYLSSFDP 79

Query: 74  SRARPYLDAANSFLEHATLYEKLVFDTISYLVSEDRDDDVAIQLHSKLLEEFPRDLVSLK 133
            RAR Y  AA S L  ATLYEK VF+ +SYL+SE+ DDDVA++LHSKLL++FP+DL+S K
Sbjct: 80  VRARSYALAAESRLGKATLYEKAVFEAVSYLLSENMDDDVALELHSKLLKKFPKDLLSWK 139

Query: 134 RAQVLCFYMGRPDLSLSLVHQVLPQNEGQNYIYGMLAFPLLELGQMKDAEKAAQRGFEIN 193
           R + LC YMGR DLSL L  ++LPQNEGQ Y+ GMLAF L+ELG +++AE+AA++G EIN
Sbjct: 140 RVETLCSYMGRHDLSLPLFRKILPQNEGQVYVNGMLAFCLIELGHLREAEEAARKGCEIN 199

Query: 194 KQDIWSHHGLCHVLQYECRFKEAIQFMEECXXXXXXXXXFMLTHNWWHVALCYLEGNAPL 253
           + D W+HH LCHVLQ ECRFKEA++FMEE             +HNWWHVA+CYLEG + +
Sbjct: 200 ENDSWAHHALCHVLQTECRFKEAVKFMEEHSDSWDSCSSLRFSHNWWHVAVCYLEGGSHI 259

Query: 254 QRVLEIYDNYIWKELDKTDTGSAEVYLNAVALLLRLCVRDEL-DMLGDRLKILAECLTDQ 312
            +V E+YD+ +WKEL+K D  + +VY +A+ LLLRL  R +L D   DRL+ LA+ LTD+
Sbjct: 260 SKVEEVYDHQMWKELEKDDAVARDVYTDALGLLLRLDTRGKLDDGFQDRLEKLADSLTDK 319

Query: 313 ANWYMEWHLDVLTVWALAKTGEIYKAEDLLKGLRDRVSRMTXXXXXXXXXXXXXAEALYA 372
           A WY +W  D+ T+WAL+K  +   A +LL+GL+ R S M              AEA+Y 
Sbjct: 320 AMWYQDWLFDITTIWALSKVEKTSLAHELLEGLKSRTSAMNPKKQKLMQKAILLAEAVYE 379

Query: 373 YGRGNDKHGVELLGPDFDANDYKIIGASDEQVDVFNDVWYNMLLNSGEAENAIEVIEKRI 432
           YG+GN +  +ELLG DFDA +YK+IG S  Q+DVFN++WY +LL +G++  AIEV+EK  
Sbjct: 380 YGKGNYEIALELLGLDFDAANYKVIGGSGLQMDVFNEIWYKLLLLNGKSSTAIEVLEKVT 439

Query: 433 KKREGIPYTWRLL 445
           K+R+G P+ WRLL
Sbjct: 440 KQRDGAPFLWRLL 452


>AT1G27110.3 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:9413018-9415176 REVERSE
           LENGTH=369
          Length = 369

 Score =  402 bits (1032), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/365 (53%), Positives = 262/365 (71%), Gaps = 2/365 (0%)

Query: 110 DDDVAIQLHSKLLEEFPRDLVSLKRAQVLCFYMGRPDLSLSLVHQVLPQNEGQNYIYGML 169
           DDDVA++LHSKLL++FP+DL+S KR + LC YMGR DLSL L  ++LPQNEGQ Y+ GML
Sbjct: 2   DDDVALELHSKLLKKFPKDLLSWKRVETLCSYMGRHDLSLPLFRKILPQNEGQVYVNGML 61

Query: 170 AFPLLELGQMKDAEKAAQRGFEINKQDIWSHHGLCHVLQYECRFKEAIQFMEECXXXXXX 229
           AF L+ELG +++AE+AA++G EIN+ D W+HH LCHVLQ ECRFKEA++FMEE       
Sbjct: 62  AFCLIELGHLREAEEAARKGCEINENDSWAHHALCHVLQTECRFKEAVKFMEEHSDSWDS 121

Query: 230 XXXFMLTHNWWHVALCYLEGNAPLQRVLEIYDNYIWKELDKTDTGSAEVYLNAVALLLRL 289
                 +HNWWHVA+CYLEG + + +V E+YD+ +WKEL+K D  + +VY +A+ LLLRL
Sbjct: 122 CSSLRFSHNWWHVAVCYLEGGSHISKVEEVYDHQMWKELEKDDAVARDVYTDALGLLLRL 181

Query: 290 CVRDEL-DMLGDRLKILAECLTDQANWYMEWHLDVLTVWALAKTGEIYKAEDLLKGLRDR 348
             R +L D   DRL+ LA+ LTD+A WY +W  D+ T+WAL+K  +   A +LL+GL+ R
Sbjct: 182 DTRGKLDDGFQDRLEKLADSLTDKAMWYQDWLFDITTIWALSKVEKTSLAHELLEGLKSR 241

Query: 349 VSRMTXXXXXXXXXXXXXAEALYAYGRGNDKHGVELLGPDFDANDYKIIGASDEQVDVFN 408
            S M              AEA+Y YG+GN +  +ELLG DFDA +YK+IG S  Q+DVFN
Sbjct: 242 TSAMNPKKQKLMQKAILLAEAVYEYGKGNYEIALELLGLDFDAANYKVIGGSGLQMDVFN 301

Query: 409 DVWYNMLLNSGEAENAIEVIEKRIKKREGIPYTWRLLERGYKLANRPEAGI-ASKQAKAL 467
           ++WY +LL +G++  AIEV+EK  K+R+G P+ WRLLE  Y +  + +AGI A K+AKAL
Sbjct: 302 EIWYKLLLLNGKSSTAIEVLEKVTKQRDGAPFLWRLLEESYSMEGKEKAGISAGKKAKAL 361

Query: 468 ESAYF 472
           ES+YF
Sbjct: 362 ESSYF 366