Miyakogusa Predicted Gene

Lj2g3v1349190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1349190.1 Non Chatacterized Hit- tr|B9S0F9|B9S0F9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,30.72,0.0000000000007,seg,NULL; coiled-coil,NULL; 5-AMP-ACTIVATED
PROTEIN KINASE , BETA SUBUNIT,NULL; 5'-AMP-ACTIVATED PRO,CUFF.36774.1
         (513 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G27070.1 | Symbols:  | 5'-AMP-activated protein kinase-relate...   253   2e-67
AT5G39790.1 | Symbols:  | 5'-AMP-activated protein kinase-relate...    74   2e-13
AT5G03420.1 | Symbols:  | 5'-AMP-activated protein kinase-relate...    62   7e-10
AT1G09020.1 | Symbols: SNF4, ATSNF4 | homolog of yeast sucrose n...    54   2e-07
AT4G16360.3 | Symbols:  | 5'-AMP-activated protein kinase beta-2...    53   4e-07
AT4G16360.1 | Symbols:  | 5'-AMP-activated protein kinase beta-2...    53   5e-07
AT4G16360.2 | Symbols:  | 5'-AMP-activated protein kinase beta-2...    49   7e-06

>AT1G27070.1 | Symbols:  | 5'-AMP-activated protein kinase-related |
           chr1:9396945-9399225 REVERSE LENGTH=532
          Length = 532

 Score =  253 bits (647), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 171/478 (35%), Positives = 231/478 (48%), Gaps = 44/478 (9%)

Query: 62  KGLCSVWRCKG-------RDGSGEGEAFSSLEAEILEFMQKSENPGAFPTKNELVAAGRV 114
           K  CS  RC G       R+   + E    LE EILEFM+ SE PG FP+K +L+ +GR 
Sbjct: 66  KSCCS--RCNGVSRMCNKRNLGWDSEGSKDLETEILEFMKNSEKPGMFPSKKDLIRSGRF 123

Query: 115 DLVEAIVEEGGWLAYGWDLNDGFLESHDLEDGSGSEIEYNXXXXXXXXXXXXXXXXXXXX 174
           DLVE IV +GGWL+ GWDL++   +    E+ +  ++                       
Sbjct: 124 DLVERIVNQGGWLSMGWDLDEQEEKVRVNENVTPQDLHIEKQLPNCNSPEMDKTLNHGDL 183

Query: 175 XXXXXVEFEAEE------SGIEGILNRLEKYRSNSFGSGFRGKEDSTSSENNEDRD---E 225
                +    E+      SGIEGIL RLEK R+ S G   R    S  + ++   +    
Sbjct: 184 DLSSNLSSSTEQVESRNDSGIEGILTRLEKERNLSLGISVRENGKSNGAMHDISPNGSVP 243

Query: 226 WDHRTPTNA----------------VKLDQHKSQLGTDSFRNSLKPEMWKSWVIQRNGSQ 269
           W  R  T +                 +    KS  G     +S   E W++W ++R G  
Sbjct: 244 WSSRIVTASEIQEVDGSRGSGEYAQSRYQGAKSVSGKPGLSDSPTSETWRTWSMRRAGFT 303

Query: 270 DADFEDAEIVPSEAPKGVSNVSGRPDILKTNKFSSELRSRETGWDSVDGIRNANHIDIKS 329
           D DFE AEI  S    G++ V  + D  K +  S   + R           + N   IK 
Sbjct: 304 DEDFEAAEISSS----GLTGVK-KDDTKKDSGDSMNGKDR-----IASSSEDVNKTHIKH 353

Query: 330 RLQHLESELSSALHVMRSITPKASMDLEQXXXXXXXXXXXXXXEFRENEIMHAQDTLRSL 389
           RLQ L+SELSS LH +RS   K     +               E++ENEI+HAQ+ LRS 
Sbjct: 354 RLQQLQSELSSVLHSLRSPPDKVVTSKDSETTAGNLENLSDDWEYKENEIIHAQNKLRST 413

Query: 390 RAKLSVLEGXXXXXXXXXXXXXXXXXXXXXXXXXXVNLLKSVDIVWPKPASEVFLVGSFD 449
           RAKL+VLEG                          + LL++  IVWP  ASEV L GSFD
Sbjct: 414 RAKLAVLEGKMAMAIIDAQRIVREKQRRIDHASRALRLLRTASIVWPNSASEVLLTGSFD 473

Query: 450 GWSFKRKMERSVTGVFTLALYLYPGTYEIKFIVDGEWQIDPLLPIVNNNGHENNVLTV 507
           GWS +RKM+++  GVF+L+L LYPG YEIKFIVDG+W++DPL PIV + G+ENN+L +
Sbjct: 474 GWSTQRKMKKAENGVFSLSLKLYPGKYEIKFIVDGQWKVDPLRPIVTSGGYENNLLII 531


>AT5G39790.1 | Symbols:  | 5'-AMP-activated protein kinase-related |
           chr5:15932884-15935121 REVERSE LENGTH=273
          Length = 273

 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 3/82 (3%)

Query: 429 KSVDIVWPKPASEVFLVGSFDGWSFKRKMERSVTGVFT---LALYLYPGTYEIKFIVDGE 485
           K V + W   A  V ++GSFDGWS +  +    + +FT     L+L PG YE+KF+VDGE
Sbjct: 191 KEVHVFWIGMAESVQVMGSFDGWSQREDLSPEYSALFTKFSTTLFLRPGRYEMKFLVDGE 250

Query: 486 WQIDPLLPIVNNNGHENNVLTV 507
           WQI P  P       ENNVL V
Sbjct: 251 WQISPEFPTSGEGLMENNVLVV 272


>AT5G03420.1 | Symbols:  | 5'-AMP-activated protein kinase-related |
           chr5:845641-848705 FORWARD LENGTH=598
          Length = 598

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 6/86 (6%)

Query: 428 LKSVDIVWPKPASEVFLVGSFDGWSFKRKMERSVTG------VFTLALYLYPGTYEIKFI 481
           L+ V I +    + V + GSF+GW  +  ME   +        ++  L+LYPGTYEIKFI
Sbjct: 510 LQEVVIEYCGDGNAVEVTGSFNGWQHRVGMELQASKSIGKQKCWSTLLWLYPGTYEIKFI 569

Query: 482 VDGEWQIDPLLPIVNNNGHENNVLTV 507
           VDG+W  DP    V      NN+L V
Sbjct: 570 VDGQWITDPQKDSVTRGHISNNILKV 595


>AT1G09020.1 | Symbols: SNF4, ATSNF4 | homolog of yeast sucrose
           nonfermenting 4 | chr1:2900149-2904212 REVERSE
           LENGTH=487
          Length = 487

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 2/84 (2%)

Query: 426 NLLKSVDIVWPKPASEVFLVGSFDGWSFKRKME--RSVTGVFTLALYLYPGTYEIKFIVD 483
            LL     VWP     VFL GSF  W+    M        VF +   L PG ++ KF VD
Sbjct: 18  QLLTPTRFVWPYGGRRVFLSGSFTRWTEHVPMSPLEGCPTVFQVICNLTPGYHQYKFFVD 77

Query: 484 GEWQIDPLLPIVNNNGHENNVLTV 507
           GEW+ D   P V+ NG   N + +
Sbjct: 78  GEWRHDEHQPFVSGNGGVVNTIFI 101


>AT4G16360.3 | Symbols:  | 5'-AMP-activated protein kinase beta-2
           subunit protein | chr4:9245571-9246833 FORWARD
           LENGTH=261
          Length = 261

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 2/79 (2%)

Query: 433 IVWPKPASEVFLVGSFDGWSFKRKMERSVTGVFTLALYLYPGTYEIKFIVDGEWQIDPLL 492
           I W     E+ + GS+D W  + +++RS    FT+   L  G YE +FIVDG+W+  P L
Sbjct: 78  ITWCHGGKEIAVEGSWDNWKTRSRLQRSGKD-FTIMKVLPSGVYEYRFIVDGQWRHAPEL 136

Query: 493 PIVNNN-GHENNVLTVRDW 510
           P+  ++ G+  N+L ++D+
Sbjct: 137 PLARDDAGNTFNILDLQDY 155


>AT4G16360.1 | Symbols:  | 5'-AMP-activated protein kinase beta-2
           subunit protein | chr4:9245662-9246833 FORWARD
           LENGTH=259
          Length = 259

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 2/79 (2%)

Query: 433 IVWPKPASEVFLVGSFDGWSFKRKMERSVTGVFTLALYLYPGTYEIKFIVDGEWQIDPLL 492
           I W     E+ + GS+D W  + +++RS    FT+   L  G YE +FIVDG+W+  P L
Sbjct: 76  ITWCHGGKEIAVEGSWDNWKTRSRLQRSGKD-FTIMKVLPSGVYEYRFIVDGQWRHAPEL 134

Query: 493 PIVNNN-GHENNVLTVRDW 510
           P+  ++ G+  N+L ++D+
Sbjct: 135 PLARDDAGNTFNILDLQDY 153


>AT4G16360.2 | Symbols:  | 5'-AMP-activated protein kinase beta-2
           subunit protein | chr4:9245662-9246833 FORWARD
           LENGTH=258
          Length = 258

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 3/79 (3%)

Query: 433 IVWPKPASEVFLVGSFDGWSFKRKMERSVTGVFTLALYLYPGTYEIKFIVDGEWQIDPLL 492
           I W     E+ + GS+D W   R ++RS    FT+   L  G YE +FIVDG+W+  P L
Sbjct: 76  ITWCHGGKEIAVEGSWDNWKTSR-LQRSGKD-FTIMKVLPSGVYEYRFIVDGQWRHAPEL 133

Query: 493 PIVNNN-GHENNVLTVRDW 510
           P+  ++ G+  N+L ++D+
Sbjct: 134 PLARDDAGNTFNILDLQDY 152