Miyakogusa Predicted Gene

Lj2g3v1338980.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1338980.2 Non Chatacterized Hit- tr|G7K9S6|G7K9S6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,72.73,0,seg,NULL,CUFF.36770.2
         (542 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G17900.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   437   e-123

>AT3G17900.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 23 plant
           structures; EXPRESSED DURING: 13 growth stages; Has 45
           Blast hits to 44 proteins in 14 species: Archae - 0;
           Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39;
           Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
           | chr3:6128983-6133069 FORWARD LENGTH=838
          Length = 838

 Score =  437 bits (1124), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 250/505 (49%), Positives = 321/505 (63%), Gaps = 38/505 (7%)

Query: 51  DTKMITPFKVSAMASANGTGQSPEKENGNTENRINS--------------VXXXXXXXXX 96
           DT++ITPFKV+ + S  G  +  +K+NG+  +  ++                        
Sbjct: 141 DTEIITPFKVAEVMSRTGQRKVSDKQNGDMSDGASTPSGDGEMSPDAQFATQNGDSPCKE 200

Query: 97  XXXXXXDISDVESRLQTEVHKRKTALLLQKFENSHFFVRISDSDEPLWXXXXXXXXXXXX 156
                 D+SD ES L+ E HKR+T  LL +F+ SHFFVRI++S EPLW            
Sbjct: 201 SLDSQKDLSDGESILRMEDHKRRTEDLLSRFQKSHFFVRIAESGEPLWSKKSSLVADTEM 260

Query: 157 XXXXXQKAPIIKTKEAALTPTSAVIDRGNFDGTISGGAARNSAKCFALPNGDIVVLLQVN 216
                      + +  +    SA +DRG+FD  +SGG AR+ AKC ALPNGDIVV LQV 
Sbjct: 261 DEE--------RKRTKSRPCVSAFVDRGDFDPNVSGGVARSKAKCCALPNGDIVVSLQVY 312

Query: 217 VDVTSLKDPCIEILQFEKCQERMLSPDSQVDAVYTNQDPYAELLNWILPLDNGKPLTRPL 276
           + V   K+P IEILQFEK Q++  +P++       ++DPY  LL W++PLDN        
Sbjct: 313 I-VDCPKEPIIEILQFEKHQDQDQNPEN-------DKDPYGNLLKWLIPLDNTISQQPRS 364

Query: 277 SPSHLTSNSGISSTSQRSNFPASSGSQLFSFGNFRSYSMSSLPQTTTTPNAPVKAVSSKP 336
            P  +T +  ISST+ +    ++SGSQLFSFG+FRSYSMS+LP  T     P+K  SSKP
Sbjct: 365 LPPPITPSPSISSTAHKPAISSTSGSQLFSFGHFRSYSMSALPPNTAPVTGPIKTQSSKP 424

Query: 337 SFDLEDRDRNSSKKYL-WKKTGVEELLSFRGVSLERDRFSVCCGLEGIYTPGKKWRRKVE 395
           SFD+ED D  S +     +K+G EELLSFRGV+LERDRFSV CGLEGI  PG++WRRK+E
Sbjct: 425 SFDIEDWDSYSGQTVRNGQKSGTEELLSFRGVALERDRFSVRCGLEGICIPGRRWRRKLE 484

Query: 396 IIQPVEIHSFAADFNSEDILCVQIKNVAPAHAPDIVIFIDAINIVFEESAKNGTQSSLPL 455
           IIQP+EI+SFAAD N++D+LCVQIKNVAP HAPDIVI+IDAI IVFEE+ KN + SS+P+
Sbjct: 485 IIQPIEINSFAADCNTDDLLCVQIKNVAPTHAPDIVIYIDAITIVFEEAGKNASPSSVPI 544

Query: 456 SCVEAGNDHSFPNLALRRGEEHSFILKPAPSTLKGLQVQDNR----SSQLS--KLQSGNK 509
           +C+EAGN+HS PNL LR+GEEHSFI+KPA S    L+    R    SS LS   +    K
Sbjct: 545 ACIEAGNEHSLPNLTLRKGEEHSFIVKPAFSVGSNLKPSAARNKLKSSSLSLPTVNFERK 604

Query: 510 KPKFSIDQYAIMVSCRCNYT-GRLF 533
               S DQYA+MVSCRCNYT  RLF
Sbjct: 605 GSGLSGDQYAVMVSCRCNYTESRLF 629