Miyakogusa Predicted Gene
- Lj2g3v1338940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1338940.1 Non Chatacterized Hit- tr|I3SXK0|I3SXK0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.7,0,DUF1338,Domain of unknown function DUF1338; seg,NULL;
FAMILY NOT NAMED,NULL,CUFF.36757.1
(373 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G07040.1 | Symbols: | unknown protein; INVOLVED IN: biologic... 481 e-136
AT1G27020.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 340 9e-94
AT1G27030.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 338 4e-93
>AT1G07040.1 | Symbols: | unknown protein; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G27030.1); Has 540 Blast
hits to 538 proteins in 187 species: Archae - 0;
Bacteria - 333; Metazoa - 0; Fungi - 0; Plants - 67;
Viruses - 0; Other Eukaryotes - 140 (source: NCBI
BLink). | chr1:2161225-2163035 REVERSE LENGTH=371
Length = 371
Score = 481 bits (1237), Expect = e-136, Method: Compositional matrix adjust.
Identities = 222/302 (73%), Positives = 262/302 (86%)
Query: 69 SSIQGGEAFFRGVLENMQSVYLNRNPTAKAILDLVHSADNNSICYDHLAFRTFGVNGHGI 128
SS E+FFR VL M++VYLNRNPT K++L+LV S D+ +CYDHLAFRTFG+ G+GI
Sbjct: 67 SSKVAAESFFRSVLGQMETVYLNRNPTPKSVLELVRSVDDQQLCYDHLAFRTFGIGGYGI 126
Query: 129 DSMASFFLDYGYTQRDELRFPAKKLRALWFAPPSDSLAGSGSGMNGPLPRIFISELLVDQ 188
DS+ASFFLDYGYT DEL+FPAKKLRALWFAPP+ S GSG+NGPLPR+FISELLVDQ
Sbjct: 127 DSLASFFLDYGYTPMDELKFPAKKLRALWFAPPNASAVPGGSGVNGPLPRVFISELLVDQ 186
Query: 189 MSPQTQEIIRKYTESSGIGNKHAALASSLGLLTWEKPLYSEFQQLASESEYAAWALVNGY 248
MS QTQ++IRKYTE+S G K+A L+S+LG LTWEKPL SEF+QLA ESEYAAW LVNGY
Sbjct: 187 MSSQTQDVIRKYTEASPNGKKYAGLSSALGTLTWEKPLSSEFEQLARESEYAAWTLVNGY 246
Query: 249 AVNHVTISTHRLKTHLRDIKTLNQFIEESGFRLNSEGGVLKVSPDGLLLQSSTVADSVSF 308
A+NHVTIS HRLK+HL IK LNQF+EE G +LNSEGGVLKVSPDG L QSSTVADS+SF
Sbjct: 247 ALNHVTISVHRLKSHLNKIKKLNQFLEEKGIKLNSEGGVLKVSPDGGLQQSSTVADSISF 306
Query: 309 QFSDGLTKSVPCSYIEFAERLVLPQYKNLPDTEVKEFHRRDGFEVASADKIFESTSKEQV 368
+F+DG+TKS+PCSYIEFAERLVLPQY+N+P++E++E HRRDGFEV +ADKIFEST +EQ+
Sbjct: 307 KFADGVTKSIPCSYIEFAERLVLPQYQNIPESEIQESHRRDGFEVGNADKIFESTFQEQL 366
Query: 369 SR 370
SR
Sbjct: 367 SR 368
>AT1G27020.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G27030.1); Has 514 Blast hits to 514 proteins
in 175 species: Archae - 0; Bacteria - 311; Metazoa - 0;
Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes -
138 (source: NCBI BLink). | chr1:9378635-9380419 FORWARD
LENGTH=308
Length = 308
Score = 340 bits (872), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 163/297 (54%), Positives = 212/297 (71%), Gaps = 4/297 (1%)
Query: 69 SSIQGG-EAFFRGVLENMQSVYLNRNPTAKAILDLVHSADNNSICYDHLAFRTFGVNGHG 127
SS +GG E F + V E++ YL +NP AK I +LV S DN I YDH FRTF V+G+G
Sbjct: 10 SSFKGGSETFLQNVFESILKTYLRKNPMAKTIWELVKSVDNEKISYDHFFFRTFKVDGYG 69
Query: 128 IDSMASFFLDYGYTQRDELRFPAKKLRALWFAPPSDSLAGSGSGM-NGPLPRIFISELLV 186
IDS+ASFF+DYGY L FP KK++ LW +PP +G G+ NGPLPR+ I+ELLV
Sbjct: 70 IDSLASFFMDYGYKVGGRLDFPKKKVQVLWLSPPDVHFPDNGYGIGNGPLPRLVIAELLV 129
Query: 187 DQMSPQTQEIIRKYTESSGIGNKHAALASSLGLLTWEKPLYSEFQQLASESEYAAWALVN 246
+++SP++QEIIRKY + G K A L+S+LG L WEKP ++F QLA ESE+AAW LV
Sbjct: 130 EELSPESQEIIRKYLKPEG--GKQAVLSSTLGSLIWEKPTSTDFNQLAKESEFAAWTLVY 187
Query: 247 GYAVNHVTISTHRLKTHLRDIKTLNQFIEESGFRLNSEGGVLKVSPDGLLLQSSTVADSV 306
GY +NH+ + HRLK DIK + ++ EE+GF LN +GGVLKVS D LLLQ S +++ +
Sbjct: 188 GYTMNHLAFAVHRLKHRFSDIKCVKEYFEENGFELNKDGGVLKVSEDSLLLQVSAMSEKL 247
Query: 307 SFQFSDGLTKSVPCSYIEFAERLVLPQYKNLPDTEVKEFHRRDGFEVASADKIFEST 363
+F+DG+T+ VP SYIEF ERLVLPQ+K++P E+KEFHRR+G E ASA I EST
Sbjct: 248 VVEFADGVTQIVPASYIEFVERLVLPQFKDMPCDEIKEFHRREGLEQASAYHIMEST 304
>AT1G27030.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G27020.1); Has 504 Blast hits to 502 proteins
in 169 species: Archae - 0; Bacteria - 299; Metazoa - 0;
Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes -
138 (source: NCBI BLink). | chr1:9381842-9383712 FORWARD
LENGTH=310
Length = 310
Score = 338 bits (867), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 156/297 (52%), Positives = 214/297 (72%), Gaps = 4/297 (1%)
Query: 69 SSIQG-GEAFFRGVLENMQSVYLNRNPTAKAILDLVHSADNNSICYDHLAFRTFGVNGHG 127
SS +G E F R V EN+ YL +NPTAK I +LV S DN ICYDH FRT V+G+G
Sbjct: 10 SSFKGESEIFLRNVFENILKTYLRKNPTAKTIWELVQSLDNEKICYDHFTFRTLKVDGYG 69
Query: 128 IDSMASFFLDYGYTQRDELRFPAKKLRALWFAPPSDSLAGSGSGM-NGPLPRIFISELLV 186
IDS++SFF+ YGY L FP KKLR LWF+PP + G G+ NGPLPR+ I+E+LV
Sbjct: 70 IDSLSSFFMAYGYKIGGGLDFPKKKLRVLWFSPPDVHVPNDGHGLGNGPLPRLVIAEVLV 129
Query: 187 DQMSPQTQEIIRKYTESSGIGNKHAALASSLGLLTWEKPLYSEFQQLASESEYAAWALVN 246
D++SP++Q IIRKY + G K A L+S+LG L WEKP +++F+QLA ESE+AAW L++
Sbjct: 130 DELSPESQGIIRKYLKQEG--GKQAVLSSTLGSLIWEKPTWTDFKQLAKESEFAAWTLIH 187
Query: 247 GYAVNHVTISTHRLKTHLRDIKTLNQFIEESGFRLNSEGGVLKVSPDGLLLQSSTVADSV 306
GY +NH+ + HR K DIK + Q +EE GF+LNS+G +LKVS DGLL Q S++++ +
Sbjct: 188 GYTMNHLAFAVHRFKHRFSDIKFVKQRLEEKGFKLNSDGEILKVSQDGLLFQVSSISERL 247
Query: 307 SFQFSDGLTKSVPCSYIEFAERLVLPQYKNLPDTEVKEFHRRDGFEVASADKIFEST 363
F+DG+T+++P SYIEF +R VLP++K++P E+KEFHRR+ FE+ +A+ + EST
Sbjct: 248 PVTFADGVTETIPASYIEFTQRQVLPEFKDVPLDEIKEFHRREAFELDNANHVMEST 304