Miyakogusa Predicted Gene
- Lj2g3v1338840.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1338840.2 Non Chatacterized Hit- tr|C5XFN5|C5XFN5_SORBI
Putative uncharacterized protein Sb03g009200
OS=Sorghu,28.32,1e-18,coiled-coil,NULL; DUF1664,Protein of unknown
function DUF1664; SUBFAMILY NOT NAMED,NULL; FAMILY NOT ,CUFF.36802.2
(296 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27000.1 | Symbols: | Protein of unknown function (DUF1664) ... 276 1e-74
AT2G02730.2 | Symbols: | Protein of unknown function (DUF1664) ... 241 3e-64
AT2G02730.1 | Symbols: | Protein of unknown function (DUF1664) ... 241 3e-64
AT1G04960.1 | Symbols: | Protein of unknown function (DUF1664) ... 181 5e-46
AT1G04960.2 | Symbols: | Protein of unknown function (DUF1664) ... 159 2e-39
AT1G24265.2 | Symbols: | Protein of unknown function (DUF1664) ... 96 3e-20
AT1G24265.1 | Symbols: | Protein of unknown function (DUF1664) ... 96 3e-20
AT1G24265.3 | Symbols: | Protein of unknown function (DUF1664) ... 87 1e-17
AT1G24267.1 | Symbols: | Protein of unknown function (DUF1664) ... 72 3e-13
AT1G24267.2 | Symbols: | Protein of unknown function (DUF1664) ... 70 3e-12
>AT1G27000.1 | Symbols: | Protein of unknown function (DUF1664) |
chr1:9374068-9376422 FORWARD LENGTH=304
Length = 304
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/305 (50%), Positives = 198/305 (64%), Gaps = 12/305 (3%)
Query: 3 MAMQSGIGMSKILIIAGAGYTSTVLIKNGKLSDLIGDLQALVKGLEKSGDQAEGEGEYVD 62
MAMQ+G+G+S+I ++AGAGYT T+++KNGKLSDL+G+LQ+LVKG+EKSG+ +EG+ + D
Sbjct: 1 MAMQAGVGLSRIFLLAGAGYTGTIMMKNGKLSDLLGELQSLVKGMEKSGEGSEGDSDVSD 60
Query: 63 AIAAQVRRLANEVRQLASNRPITVVNGGSGQGNLPSLVVPAVALGALGYGYMRWKGISFS 122
AIAAQVRRLA E+RQLAS + ITV+NG SG NL +L VPA ALGALGYGYM WKG+SF+
Sbjct: 61 AIAAQVRRLAMEIRQLASQQHITVMNGVSG-ANLQALAVPAAALGALGYGYMWWKGLSFT 119
Query: 123 DLMYVTKRQMEKAVTDLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKDDV 182
DLMYVTK M AV +L K L V++ +A K+HLTQRI+NLDDK+ KQ +LS+ I V
Sbjct: 120 DLMYVTKANMAAAVANLTKNLEQVSETLAAAKRHLTQRIQNLDDKVEKQIDLSKEINSQV 179
Query: 183 SGVRSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIETLHGNIGKMPEHL 242
R I+ + DL SL + LD KL TL QD TN + L G K+PE
Sbjct: 180 ISARENISSLEMDLESLHNLITGLDGKLDTLEYKQDVTNVFMLNLYNYFGGKSTKLPEME 239
Query: 243 QEQLKLPGKTRNLLTYSGTPNLNGLKDIVLPTGLGMLASDKPQ----------RPLL-RT 291
Q QL + + RNLL T L L + + + + + Q RPLL R
Sbjct: 240 QLQLPVNQRARNLLADVETKGLKNLAEELFKSNGTQVTTTVKQISLSKVNVKSRPLLSRA 299
Query: 292 TSTRC 296
S +C
Sbjct: 300 ASAKC 304
>AT2G02730.2 | Symbols: | Protein of unknown function (DUF1664) |
chr2:765280-767336 REVERSE LENGTH=276
Length = 276
Score = 241 bits (616), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 133/270 (49%), Positives = 186/270 (68%), Gaps = 7/270 (2%)
Query: 3 MAMQSGIGMSKILIIAGAGYTSTVLIKNGKLSDLIGDLQALVKGLEKSGDQAEGEGEYVD 62
MAMQSGIG+SKILI+AGAGYTST+L+KNGK++D++G+LQALVK EKSGD + + D
Sbjct: 1 MAMQSGIGLSKILILAGAGYTSTILVKNGKMADILGELQALVKRFEKSGDHVDDDS---D 57
Query: 63 AIAAQVRRLANEVRQLASNRPITVVNGGSGQGNLPSLVVPAVALGALGYGYMRWKGISFS 122
A+ Q++RLA EVRQLAS+R ITV+NG G P +VPA LGALGYGYM +KGISFS
Sbjct: 58 AMTTQMQRLAMEVRQLASSRQITVMNGAQGADFTP-FIVPAATLGALGYGYMWFKGISFS 116
Query: 123 DLMYVTKRQMEKAVTDLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKDDV 182
D+M VTKR ME AV++L K L V++ I + KKHL+QR++ +DDK+ Q +L + ++D+V
Sbjct: 117 DIMCVTKRNMENAVSNLTKHLDTVSEAILNAKKHLSQRLQKVDDKLDLQKDLLKGVQDNV 176
Query: 183 SGVRSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIETLHGNIGKMPEHL 242
+ ++ DD ++ + KL ++ Q+ N G+ YL ++L G KMP+ L
Sbjct: 177 GLALEDLANIGDDFDAMHSIFGGMGGKLDSIEYKQNIANMGLIYLCDSLGGENHKMPDIL 236
Query: 243 -QEQLKLPGKTRN--LLTYSGTPNLNGLKD 269
QE+L+L GK+ +LT T + GLK+
Sbjct: 237 MQEKLRLSGKSNTCIVLTTEETSSSEGLKE 266
>AT2G02730.1 | Symbols: | Protein of unknown function (DUF1664) |
chr2:765280-767336 REVERSE LENGTH=276
Length = 276
Score = 241 bits (616), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 133/270 (49%), Positives = 186/270 (68%), Gaps = 7/270 (2%)
Query: 3 MAMQSGIGMSKILIIAGAGYTSTVLIKNGKLSDLIGDLQALVKGLEKSGDQAEGEGEYVD 62
MAMQSGIG+SKILI+AGAGYTST+L+KNGK++D++G+LQALVK EKSGD + + D
Sbjct: 1 MAMQSGIGLSKILILAGAGYTSTILVKNGKMADILGELQALVKRFEKSGDHVDDDS---D 57
Query: 63 AIAAQVRRLANEVRQLASNRPITVVNGGSGQGNLPSLVVPAVALGALGYGYMRWKGISFS 122
A+ Q++RLA EVRQLAS+R ITV+NG G P +VPA LGALGYGYM +KGISFS
Sbjct: 58 AMTTQMQRLAMEVRQLASSRQITVMNGAQGADFTP-FIVPAATLGALGYGYMWFKGISFS 116
Query: 123 DLMYVTKRQMEKAVTDLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKDDV 182
D+M VTKR ME AV++L K L V++ I + KKHL+QR++ +DDK+ Q +L + ++D+V
Sbjct: 117 DIMCVTKRNMENAVSNLTKHLDTVSEAILNAKKHLSQRLQKVDDKLDLQKDLLKGVQDNV 176
Query: 183 SGVRSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIETLHGNIGKMPEHL 242
+ ++ DD ++ + KL ++ Q+ N G+ YL ++L G KMP+ L
Sbjct: 177 GLALEDLANIGDDFDAMHSIFGGMGGKLDSIEYKQNIANMGLIYLCDSLGGENHKMPDIL 236
Query: 243 -QEQLKLPGKTRN--LLTYSGTPNLNGLKD 269
QE+L+L GK+ +LT T + GLK+
Sbjct: 237 MQEKLRLSGKSNTCIVLTTEETSSSEGLKE 266
>AT1G04960.1 | Symbols: | Protein of unknown function (DUF1664) |
chr1:1408021-1410673 REVERSE LENGTH=317
Length = 317
Score = 181 bits (459), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 163/264 (61%), Gaps = 11/264 (4%)
Query: 3 MAMQSGIGMSKILIIAGAGYTSTVLIKNGKLSDLIGDLQALV---KGLEKSGDQAEGEGE 59
MAMQ+G+ SK+LI+ GAG + ++++++G+LSDLI LQ L+ +G+E + + +G
Sbjct: 1 MAMQAGVQTSKVLILLGAGVSGSIVLRHGRLSDLIAQLQDLLNGAQGVESTPFKYDGA-- 58
Query: 60 YVDAIAAQVRRLANEVRQLASNRPITVVNGGSGQGNLPSLVVPAVALGALGYGYMRWKGI 119
+AAQ+R+LANE+++L P+T+ NG S S +VPA A+GA+GY YM WKG
Sbjct: 59 ---LLAAQIRQLANEIKELTMTNPVTIFNGDSNSSGYASYLVPAAAVGAMGYCYMWWKGW 115
Query: 120 SFSDLMYVTKRQMEKAVTDLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIK 179
SFSD M+VTK+ M AV ++K+L ++D +A +KHL+Q++ LD K+ +QNE S+ I
Sbjct: 116 SFSDAMFVTKKNMADAVASVSKQLDDLSDTLASTRKHLSQKLATLDWKVEEQNETSKMIL 175
Query: 180 DDVSGVRSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIETL---HGNIG 236
DV+ +RS+I+ + D L + ++ K+ +L QD T G+ +L +
Sbjct: 176 SDVTEMRSSISQIGFDFKQLNEMISGIEGKIESLESKQDVTLSGLWHLCQVAGVKDSTST 235
Query: 237 KMPEHLQEQLKLPGKTRNLLTYSG 260
K+ + + E+L + GK + SG
Sbjct: 236 KVFQDVGERLPIDGKPSTNTSLSG 259
>AT1G04960.2 | Symbols: | Protein of unknown function (DUF1664) |
chr1:1408021-1410424 REVERSE LENGTH=334
Length = 334
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 148/246 (60%), Gaps = 11/246 (4%)
Query: 21 GYTSTVLIKNGKLSDLIGDLQALV---KGLEKSGDQAEGEGEYVDAIAAQVRRLANEVRQ 77
G + ++++++G+LSDLI LQ L+ +G+E + + +G +AAQ+R+LANE+++
Sbjct: 36 GVSGSIVLRHGRLSDLIAQLQDLLNGAQGVESTPFKYDGA-----LLAAQIRQLANEIKE 90
Query: 78 LASNRPITVVNGGSGQGNLPSLVVPAVALGALGYGYMRWKGISFSDLMYVTKRQMEKAVT 137
L P+T+ NG S S +VPA A+GA+GY YM WKG SFSD M+VTK+ M AV
Sbjct: 91 LTMTNPVTIFNGDSNSSGYASYLVPAAAVGAMGYCYMWWKGWSFSDAMFVTKKNMADAVA 150
Query: 138 DLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKDDVSGVRSTITDMHDDLG 197
++K+L ++D +A +KHL+Q++ LD K+ +QNE S+ I DV+ +RS+I+ + D
Sbjct: 151 SVSKQLDDLSDTLASTRKHLSQKLATLDWKVEEQNETSKMILSDVTEMRSSISQIGFDFK 210
Query: 198 SLRYSVDKLDKKLATLCLNQDGTNYGVKYLIETL---HGNIGKMPEHLQEQLKLPGKTRN 254
L + ++ K+ +L QD T G+ +L + K+ + + E+L + GK
Sbjct: 211 QLNEMISGIEGKIESLESKQDVTLSGLWHLCQVAGVKDSTSTKVFQDVGERLPIDGKPST 270
Query: 255 LLTYSG 260
+ SG
Sbjct: 271 NTSLSG 276
>AT1G24265.2 | Symbols: | Protein of unknown function (DUF1664) |
chr1:8600613-8603630 FORWARD LENGTH=348
Length = 348
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 129/282 (45%), Gaps = 18/282 (6%)
Query: 11 MSKILIIAGAGYTSTVLIKNGKLSDLI----GDLQALVKGLEKSGDQAEGEGEYVDAIAA 66
+ K+ I+ GAG + K G L D+ G + + + L++ + D + A
Sbjct: 5 LGKLTILIGAGLIGSAFSKEGGLPDVSNLVSGAFKMVFRQLKQDEPSKSASKPHDDVLVA 64
Query: 67 QVRRLANEVRQLASNRPITVVN-GGSGQGNLPSLVVPAVALGALGYGYMRWKGISFSDLM 125
QV L +E++ L SNRPIT+V+ GSG N +++ +G +GYGY+ WKG D M
Sbjct: 65 QVNSLRHEIQLLGSNRPITIVSPSGSGGRNYGLIII----VGVIGYGYVWWKGWKLPDFM 120
Query: 126 YVTKRQMEKAVTDLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKDDVSGV 185
+ T+R + A ++ ++ + K+ L+ I+ + ++ E+ + +V+ +
Sbjct: 121 FATRRSLSDACNNVGNQIDGFYSSLKGTKRELSSEIDMMGRRLDANTEVIQETIQEVAKL 180
Query: 186 RSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIETLHGNIGKMPEHLQEQ 245
+ + + DD+ ++ + + L K+ + NQD T GV L N + +QE
Sbjct: 181 QDGTSFIKDDVKAVFDAFENLASKVCRIEGNQDITLRGVGALHAQCQEN-----QRIQES 235
Query: 246 LKLPGKTRNLLTYSGTPNLNGLKDIVLPTGLGMLASDKPQRP 287
K T +L P K + LP + D+ Q P
Sbjct: 236 NKALPSTSSLPALEAAPMAPSSKTLSLPPA----SPDESQSP 273
>AT1G24265.1 | Symbols: | Protein of unknown function (DUF1664) |
chr1:8600613-8603630 FORWARD LENGTH=348
Length = 348
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 129/282 (45%), Gaps = 18/282 (6%)
Query: 11 MSKILIIAGAGYTSTVLIKNGKLSDLI----GDLQALVKGLEKSGDQAEGEGEYVDAIAA 66
+ K+ I+ GAG + K G L D+ G + + + L++ + D + A
Sbjct: 5 LGKLTILIGAGLIGSAFSKEGGLPDVSNLVSGAFKMVFRQLKQDEPSKSASKPHDDVLVA 64
Query: 67 QVRRLANEVRQLASNRPITVVN-GGSGQGNLPSLVVPAVALGALGYGYMRWKGISFSDLM 125
QV L +E++ L SNRPIT+V+ GSG N +++ +G +GYGY+ WKG D M
Sbjct: 65 QVNSLRHEIQLLGSNRPITIVSPSGSGGRNYGLIII----VGVIGYGYVWWKGWKLPDFM 120
Query: 126 YVTKRQMEKAVTDLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKDDVSGV 185
+ T+R + A ++ ++ + K+ L+ I+ + ++ E+ + +V+ +
Sbjct: 121 FATRRSLSDACNNVGNQIDGFYSSLKGTKRELSSEIDMMGRRLDANTEVIQETIQEVAKL 180
Query: 186 RSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIETLHGNIGKMPEHLQEQ 245
+ + + DD+ ++ + + L K+ + NQD T GV L N + +QE
Sbjct: 181 QDGTSFIKDDVKAVFDAFENLASKVCRIEGNQDITLRGVGALHAQCQEN-----QRIQES 235
Query: 246 LKLPGKTRNLLTYSGTPNLNGLKDIVLPTGLGMLASDKPQRP 287
K T +L P K + LP + D+ Q P
Sbjct: 236 NKALPSTSSLPALEAAPMAPSSKTLSLPPA----SPDESQSP 273
>AT1G24265.3 | Symbols: | Protein of unknown function (DUF1664) |
chr1:8600613-8603630 FORWARD LENGTH=383
Length = 383
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 18/268 (6%)
Query: 25 TVLIKNGKLSDLI----GDLQALVKGLEKSGDQAEGEGEYVDAIAAQVRRLANEVRQLAS 80
+ K G L D+ G + + + L++ + D + AQV L +E++ L S
Sbjct: 54 SAFSKEGGLPDVSNLVSGAFKMVFRQLKQDEPSKSASKPHDDVLVAQVNSLRHEIQLLGS 113
Query: 81 NRPITVVN-GGSGQGNLPSLVVPAVALGALGYGYMRWKGISFSDLMYVTKRQMEKAVTDL 139
NRPIT+V+ GSG N +++ +G +GYGY+ WKG D M+ T+R + A ++
Sbjct: 114 NRPITIVSPSGSGGRNYGLIII----VGVIGYGYVWWKGWKLPDFMFATRRSLSDACNNV 169
Query: 140 NKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKDDVSGVRSTITDMHDDLGSL 199
++ + K+ L+ I+ + ++ E+ + +V+ ++ + + DD+ ++
Sbjct: 170 GNQIDGFYSSLKGTKRELSSEIDMMGRRLDANTEVIQETIQEVAKLQDGTSFIKDDVKAV 229
Query: 200 RYSVDKLDKKLATLCLNQDGTNYGVKYLIETLHGNIGKMPEHLQEQLKLPGKTRNLLTYS 259
+ + L K+ + NQD T GV L N + +QE K T +L
Sbjct: 230 FDAFENLASKVCRIEGNQDITLRGVGALHAQCQEN-----QRIQESNKALPSTSSLPALE 284
Query: 260 GTPNLNGLKDIVLPTGLGMLASDKPQRP 287
P K + LP + D+ Q P
Sbjct: 285 AAPMAPSSKTLSLPPA----SPDESQSP 308
>AT1G24267.1 | Symbols: | Protein of unknown function (DUF1664) |
chr1:8604451-8607241 REVERSE LENGTH=343
Length = 343
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 14/271 (5%)
Query: 8 GIGMSKILIIAGAGYTSTVLIKNGKLSDLI----GDLQALVKGLEKSGDQAEGEGEYVDA 63
I + K+ I+ GAG +VL K G L D+ G L+ + + L++ D
Sbjct: 2 AIPLGKLTILIGAGLVGSVLAKEGSLPDVSSFVSGALKMVFRQLKQEEPAKSASKPRNDT 61
Query: 64 IAAQVRRLANEVRQLASNRPITVVN-GGSGQGNLPSLVVPAVALGALGYGYMRWKGISFS 122
+ AQV L +E+ L+SNRPIT+V GSG + +G +GYGY+ WKG
Sbjct: 62 LMAQVNSLRHELSLLSSNRPITIVTTAGSGGKK----YGYIIIIGVIGYGYVWWKGWKLP 117
Query: 123 DLMYVTKRQMEKAVTDLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKDDV 182
DLM+ T+R + A + ++ ++ KK L+ +I+ + + E+ + +V
Sbjct: 118 DLMFATRRSLSDACNSVGSQIDGFYTSLSGTKKELSSKIDGMGRSLDANTEIIQDTGREV 177
Query: 183 SGVRSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIETLHGNIGKMPEHL 242
++ ++ DD+ + +V+ L K+ + NQD T GV L + N + +
Sbjct: 178 MELQRGTENIKDDVKFVFDAVENLASKVYRIEGNQDITLKGVGALHAQVREN-----KRI 232
Query: 243 QEQLKLPGKTRNLLTYSGTPNLNGLKDIVLP 273
QE K T + P + + LP
Sbjct: 233 QESNKALPSTSAVPALEAAPMTPSSRTLSLP 263
>AT1G24267.2 | Symbols: | Protein of unknown function (DUF1664) |
chr1:8604451-8607241 REVERSE LENGTH=344
Length = 344
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 124/272 (45%), Gaps = 15/272 (5%)
Query: 8 GIGMSKILIIAGAGYTSTVLIKNGKLSDLI----GDLQALVKGLEKSGDQAEGEGEYVDA 63
I + K+ I+ GAG +VL K G L D+ G L+ + + L++ D
Sbjct: 2 AIPLGKLTILIGAGLVGSVLAKEGSLPDVSSFVSGALKMVFRQLKQEEPAKSASKPRNDT 61
Query: 64 IAAQVRRLANEVRQLASNRPITVVN-GGSGQGNLPSLVVPAVALGALGYGYMRWKGISFS 122
+ AQV L +E+ L+SNRPIT+V GSG + +G +GYGY+ WKG
Sbjct: 62 LMAQVNSLRHELSLLSSNRPITIVTTAGSGGKK----YGYIIIIGVIGYGYVWWKGWKLP 117
Query: 123 DLMYVTKRQMEKAVTDLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKDDV 182
DLM+ T+R + A + ++ ++ KK L+ +I+ + + E+ + +V
Sbjct: 118 DLMFATRRSLSDACNSVGSQIDGFYTSLSGTKKELSSKIDGMGRSLDANTEIIQDTGREV 177
Query: 183 SGVRSTITDMHDDLGSLRYSVDKLDKKLA-TLCLNQDGTNYGVKYLIETLHGNIGKMPEH 241
++ ++ DD+ + +V+ L +KL + NQD T GV L + N +
Sbjct: 178 MELQRGTENIKDDVKFVFDAVENLVRKLIYRIEGNQDITLKGVGALHAQVREN-----KR 232
Query: 242 LQEQLKLPGKTRNLLTYSGTPNLNGLKDIVLP 273
+QE K T + P + + LP
Sbjct: 233 IQESNKALPSTSAVPALEAAPMTPSSRTLSLP 264