Miyakogusa Predicted Gene

Lj2g3v1337630.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1337630.2 Non Chatacterized Hit- tr|I1NAY0|I1NAY0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52856
PE,78.26,0.0000000000004,Aa_trans,Amino acid transporter,
transmembrane,CUFF.36731.2
         (72 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G11900.1 | Symbols: ANT1 | aromatic and neutral transporter 1...    69   9e-13
AT4G38250.1 | Symbols:  | Transmembrane amino acid transporter f...    54   3e-08
AT2G42005.1 | Symbols:  | Transmembrane amino acid transporter f...    48   1e-06
AT5G65990.1 | Symbols:  | Transmembrane amino acid transporter f...    45   7e-06

>AT3G11900.1 | Symbols: ANT1 | aromatic and neutral transporter 1 |
           chr3:3758523-3760103 FORWARD LENGTH=432
          Length = 432

 Score = 68.6 bits (166), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 27/46 (58%), Positives = 37/46 (80%)

Query: 13  LKEQQKDRSKFPKLLAQTFSGITLVYILFGLCGYMAFGEETKDIVT 58
           L+   ++R  FPKLLA+  +GIT VY+LFG CGYMA+G++TKDI+T
Sbjct: 240 LESSMREREAFPKLLAKVLAGITFVYVLFGFCGYMAYGDQTKDIIT 285


>AT4G38250.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr4:17935533-17936843 FORWARD
           LENGTH=436
          Length = 436

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/46 (52%), Positives = 34/46 (73%)

Query: 13  LKEQQKDRSKFPKLLAQTFSGITLVYILFGLCGYMAFGEETKDIVT 58
           L+ + KD+ KF K+LA     I+L+YI FG+ GY+AFGE+T DI+T
Sbjct: 258 LESEMKDKDKFGKVLALGMGFISLIYIAFGILGYLAFGEDTMDIIT 303


>AT2G42005.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr2:17531323-17532564 REVERSE
           LENGTH=413
          Length = 413

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/46 (47%), Positives = 33/46 (71%)

Query: 13  LKEQQKDRSKFPKLLAQTFSGITLVYILFGLCGYMAFGEETKDIVT 58
           L+ + KD+ KF K+LA +   I ++Y  FG+ GYMAFG++T DI+T
Sbjct: 237 LESETKDKDKFGKVLALSMLFIAVMYGSFGVLGYMAFGDDTMDIIT 282


>AT5G65990.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr5:26394955-26396321 FORWARD
           LENGTH=427
          Length = 427

 Score = 45.4 bits (106), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 2/47 (4%)

Query: 12  ELKEQQKDRSKFPKLLAQTFSGITLVYILFGLCGYMAFGEETKDIVT 58
           EL+ + KD  KF + L      I+++Y  FGL GYMA+GEETKDI+T
Sbjct: 250 ELEAKYKD--KFGRALGLAMGLISIMYGAFGLLGYMAYGEETKDIIT 294