Miyakogusa Predicted Gene
- Lj2g3v1296290.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1296290.1 tr|H2J8Y8|H2J8Y8_9CLOT Peptidyl-prolyl cis-trans
isomerase (Precursor) OS=Clostridium sp. BNL1100
GN,34.87,4e-19,PEPTIDYL-PROLYL CIS-TRANS ISOMERASE,NULL;
Cyclophilin-like,Cyclophilin-like peptidyl-prolyl
cis-tran,CUFF.36716.1
(226 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G26940.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 365 e-101
AT3G44600.1 | Symbols: CYP71 | cyclophilin71 | chr3:16165368-161... 63 1e-10
AT1G01940.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 60 8e-10
AT2G36130.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 57 1e-08
AT4G33060.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 56 2e-08
AT5G67530.1 | Symbols: ATPUB49, PUB49 | plant U-box 49 | chr5:26... 55 3e-08
AT3G63400.2 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 51 5e-07
AT3G63400.3 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 50 1e-06
AT3G63400.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 50 1e-06
AT2G15790.1 | Symbols: SQN, CYP40 | peptidyl-prolyl cis-trans is... 50 1e-06
>AT1G26940.1 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr1:9343193-9344962 FORWARD LENGTH=226
Length = 226
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/220 (78%), Positives = 195/220 (88%), Gaps = 2/220 (0%)
Query: 9 LIRGCIFFALLSVVSA--QEAELGSTRVVFQTNYGDIEFGFFPTVAPKTVNHIFKLVRLG 66
LI G A +S+ A E ELGS RVVFQT+YGDIEFGF+PTVAPKTV+HIFKLVRLG
Sbjct: 7 LILGLACLAFVSIAKALPHEPELGSARVVFQTSYGDIEFGFYPTVAPKTVDHIFKLVRLG 66
Query: 67 GYNTNHFFRVDKGFVAQVADVANGRSAPMNEEQRREAEKTVVGEFSQVKHVRGILSMGRY 126
GYNTNHFFRVDKGFVAQVADVA+GRSAPMNEEQR+EAEK +VGEFS VKHVRG LSMGRY
Sbjct: 67 GYNTNHFFRVDKGFVAQVADVASGRSAPMNEEQRKEAEKKIVGEFSDVKHVRGTLSMGRY 126
Query: 127 DDPDSGSSSFSILLGNAPHLDGTYAIFGRVTKGDDTLAKLEQLPTRKEGIFVMPKERITI 186
DDP+S SSFS+LLGNAPHLD YA+FG+VTKGD+TL+KLE++PTR+EGIFVMP ERITI
Sbjct: 127 DDPNSAQSSFSMLLGNAPHLDRQYAVFGKVTKGDETLSKLEEVPTRREGIFVMPTERITI 186
Query: 187 LSSYYYDTETENCEVDRSILKRRLAASAVEVERQRMKCFP 226
LS+YYYDT+ E+CE +RS+LKRRL AS VEVERQRMKCFP
Sbjct: 187 LSTYYYDTKMESCEEERSVLKRRLQASFVEVERQRMKCFP 226
>AT3G44600.1 | Symbols: CYP71 | cyclophilin71 |
chr3:16165368-16169201 REVERSE LENGTH=631
Length = 631
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 34 VVFQTNYGDIEFGFFPTVAPKTVNHIFKLVRLGGYNTNHFFRVDKGFVAQVADV---ANG 90
V+ T GDI +P PKTV + R G Y+ + F RV +GF+ Q D G
Sbjct: 478 VIMHTTLGDIHMKLYPEECPKTVENFTTHCRNGYYDNHLFHRVIRGFMIQTGDPLGDGTG 537
Query: 91 RSAPMNEEQRREAEKTVVGEFSQVKHVRGI-LSMGRYDDPDSGSSSFSILLGNAPHLDGT 149
+ E E K+ ++H R LSM P++ S F I P LD
Sbjct: 538 GQSIWGREFEDEFHKS-------LRHDRPFTLSMANA-GPNTNGSQFFITTVATPWLDNK 589
Query: 150 YAIFGRVTKGDDTLAKLEQLPTRKEGIFVMPKERITILS 188
+ +FGRV KG D + +E++ T K P + + IL+
Sbjct: 590 HTVFGRVVKGMDVVQGIEKVKTDKND---RPYQDVKILN 625
>AT1G01940.1 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein | chr1:323082-324719
FORWARD LENGTH=160
Length = 160
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 64/142 (45%), Gaps = 12/142 (8%)
Query: 34 VVFQTNYGDIEFGFFPTVAPKTVNHIFKLVRLGGYNTNHFFRVDKGFVAQVAD---VANG 90
V TN GDI+ F PK+ + L G Y+ F R KGF+ Q D G
Sbjct: 3 VTLHTNLGDIKCEIFCDEVPKSAENFLALCASGYYDGTIFHRNIKGFMIQGGDPKGTGKG 62
Query: 91 RSAPMNEEQRREAEKTVVGEFSQVKH-VRGILSMGRYDDPDSGSSSFSILLGNAPHLDGT 149
++ ++ E ++ KH RG+LSM P++ S F I PHL+G
Sbjct: 63 GTSIWGKKFNDEIRDSL-------KHNARGMLSMAN-SGPNTNGSQFFITYAKQPHLNGL 114
Query: 150 YAIFGRVTKGDDTLAKLEQLPT 171
Y IFG+V G + L +E+ T
Sbjct: 115 YTIFGKVIHGFEVLDIMEKTQT 136
>AT2G36130.1 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr2:15166863-15168259 FORWARD LENGTH=164
Length = 164
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 34 VVFQTNYGDIEFGFFPTVAPKTVNHIFKLVRLGGYNTNHFFRVDKGFVAQVAD-VANGRS 92
V +T+ G + +P+T + +L R G Y+ F R+ K F+ Q D GR
Sbjct: 12 VTLETSMGPFTVEMYYKHSPRTCRNFLELSRRGYYDNVLFHRIVKDFIVQGGDPTGTGRG 71
Query: 93 APMNEEQRREAEKTVVGEFSQVKHV-RGILSMGRYDDPDSGSSSFSILLGNAPHLDGTYA 151
+ E E ++KH GILSM P++ S F I L P LDG +
Sbjct: 72 GESIYGSKFEDEIN-----KELKHTGAGILSMANAG-PNTNGSQFFITLAPQPSLDGKHT 125
Query: 152 IFGRVTKGDDTLAKLEQLPT 171
IFGRV +G + + +L + T
Sbjct: 126 IFGRVCRGMEVIKRLGSVQT 145
>AT4G33060.1 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr4:15948535-15951954 FORWARD LENGTH=504
Length = 504
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 33 RVVFQTNYGDIEFGFFPTVAPKTVNHIFKLVRLGGYNTNHFFRVDKGFVAQVADVANGRS 92
+V+ T +G I+ +P APK+V + +L G ++ F RV GF+ Q D +
Sbjct: 14 KVIVNTTHGPIDVELWPKEAPKSVRNFVQLCLEGYFDNTIFHRVIPGFLVQGGDPTGSGT 73
Query: 93 APMNEEQRREAEKTVVGEFSQVKHV------RGILSMGRYDDPDSGSSSFSILLGNAPHL 146
+ G F+ H RGI++M P+S S F L L
Sbjct: 74 G---------GDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWL 124
Query: 147 DGTYAIFGRVTKGDD--TLAKLEQLPTRKEGIFVMPKERI 184
D + IFG+VT GD L +L ++ T K+ + P +I
Sbjct: 125 DKKHTIFGKVT-GDSIYNLLRLGEVDTSKDDRPLDPAPKI 163
>AT5G67530.1 | Symbols: ATPUB49, PUB49 | plant U-box 49 |
chr5:26941260-26943878 FORWARD LENGTH=595
Length = 595
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 23/164 (14%)
Query: 34 VVFQTNYGDIEFGFFPTVAPKTVNHIFKLVRLGGYNTNHFFRVDKGFVAQVAD-VANGRS 92
V FQT +GD+ +AP+ + L G YN F R + F+ Q D G+
Sbjct: 346 VQFQTTHGDLNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKG 405
Query: 93 A------PMNEEQRREAEKTVVGEFSQVKHV-RGILSMGRYDDPDSGSSSFSILLGNAPH 145
P +E S++ H RG++SM P + S F +L +A H
Sbjct: 406 GESIWGKPFKDEPN-----------SKLLHSGRGVVSMAN-SGPHTNGSQFFVLYKSATH 453
Query: 146 LDGTYAIFGRVTKGDDTLAKLEQLPTRKEGIFVMPKERITILSS 189
L+ + +FG V G TLA +E +P + P E I I+ +
Sbjct: 454 LNYKHTVFGGVVGGLATLAAMENVPVDESD---RPLEEIKIIEA 494
>AT3G63400.2 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr3:23412449-23415435 FORWARD LENGTH=387
Length = 387
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 68 YNTNHFFRVDKGFVAQVADVANGRSAPMNEEQRREAEKTVVGEFS----QVKH-VRGILS 122
+ + F RV KGF+AQ D +NG E G+FS ++ H G+LS
Sbjct: 59 FKGSSFHRVIKGFMAQGGDFSNGNGT--------GGESIYGGKFSDENFRLDHDGAGVLS 110
Query: 123 MGRYDDPDSGSSSFSILLGNAPHLDGTYAIFGRVTKGDDTLAKLEQLPT 171
M P++ S F IL PHLDG + +FG+V +G + K+E + T
Sbjct: 111 MANCG-PNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGT 158
>AT3G63400.3 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr3:23412449-23415435 FORWARD LENGTH=570
Length = 570
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 73 FFRVDKGFVAQVADVANGRSAPMNEEQRREAEKTVVGEFS----QVKHV-RGILSMGRYD 127
F RV KGF+AQ D +NG E G+FS ++ H G+LSM
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGT--------GGESIYGGKFSDENFRLDHDGAGVLSMANCG 115
Query: 128 DPDSGSSSFSILLGNAPHLDGTYAIFGRVTKGDDTLAKLE 167
P++ S F IL PHLDG + +FG+V +G + K+E
Sbjct: 116 -PNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKME 154
>AT3G63400.1 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr3:23412449-23415435 FORWARD LENGTH=570
Length = 570
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 73 FFRVDKGFVAQVADVANGRSAPMNEEQRREAEKTVVGEFS----QVKHV-RGILSMGRYD 127
F RV KGF+AQ D +NG E G+FS ++ H G+LSM
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGT--------GGESIYGGKFSDENFRLDHDGAGVLSMANCG 115
Query: 128 DPDSGSSSFSILLGNAPHLDGTYAIFGRVTKGDDTLAKLE 167
P++ S F IL PHLDG + +FG+V +G + K+E
Sbjct: 116 -PNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKME 154
>AT2G15790.1 | Symbols: SQN, CYP40 | peptidyl-prolyl cis-trans
isomerase / cyclophilin-40 (CYP40) / rotamase |
chr2:6878144-6880743 REVERSE LENGTH=361
Length = 361
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 32/164 (19%)
Query: 41 GDIEFGFFPTVAPKTVNHIFKLVRLG------------GYNTNHFFRVDKGFVAQVADVA 88
G I + V PKT + F+L+ G Y N F RV KGF+ Q D++
Sbjct: 18 GRIVIELYDDVVPKTAEN-FRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDIS 76
Query: 89 NGRSAPMNEEQRREAEKTVVG-----EFSQVKHVR-GILSMGRYDDPDSGSSSFSILLGN 142
+++ G E ++KH R G+LSM P++ S F I
Sbjct: 77 ANDGT---------GGESIYGLKFDDENFELKHERKGMLSMAN-SGPNTNGSQFFITTTR 126
Query: 143 APHLDGTYAIFGRVTKGDDTLAKLEQLPTRKEGIFVMPKERITI 186
HLDG + +FGRVTKG + +E + ++ P + + I
Sbjct: 127 TSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSC---PSQDVVI 167