Miyakogusa Predicted Gene

Lj2g3v1294220.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1294220.1 Non Chatacterized Hit- tr|I3SUG6|I3SUG6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,38.01,1e-18,
,CUFF.36706.1
         (300 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G02880.1 | Symbols:  | mucin-related | chr2:841303-843151 FOR...   328   2e-90
AT5G62270.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...   103   1e-22
AT5G62270.2 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   103   1e-22

>AT2G02880.1 | Symbols:  | mucin-related | chr2:841303-843151
           FORWARD LENGTH=314
          Length = 314

 Score =  328 bits (841), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 177/315 (56%), Positives = 221/315 (70%), Gaps = 32/315 (10%)

Query: 1   MQAFRRITTTAKQFHALSPAVAAAKLRFSSPNEVPATTRWLSSRESRSGEDEWNEAWESA 60
           M +  R+     +    SP    +  RF+    +P+    L S +S + ED+WN+AWESA
Sbjct: 1   MNSLHRVVGLISRTTTTSPI---SHTRFN----LPSILVNLMSTKSGNDEDKWNDAWESA 53

Query: 61  WLPEDLTPKNRAPWEGDVNL------------ADAETKAFVEEMNENWNERRKGSKDAKE 108
           WLP+DLT K RAPWE DVN              D E KAFVE+MNE+W+ERR  S   ++
Sbjct: 54  WLPDDLTDKIRAPWERDVNFPVKESTATAIEEIDVEAKAFVEDMNEHWDERRGKSGKVEK 113

Query: 109 KREENGALYSVEN-----------MKKDYRLKKQKLHAGLWMKEIEKLEEAKLGDSDSPA 157
           + E+   +   E+           MKKDYRLKKQ++HA LW+KEIEKLEEAKL DS S  
Sbjct: 114 REEKKKEIGDGEDESSSSLYSLETMKKDYRLKKQRVHASLWVKEIEKLEEAKLDDSGSGG 173

Query: 158 G-DDIQRLLDSCSDIFDTGNNDLNNAKVET-SEFKNMPDGWETISKNQEGNVWEMSQREE 215
           G DDI RLLDSCS+IFD+ ++D +  +V + SE KN PDGWE+ +K Q+GN+WEMSQREE
Sbjct: 174 GADDIDRLLDSCSEIFDSVDHDFDKLEVSSGSELKNKPDGWESTAKEQDGNLWEMSQREE 233

Query: 216 DILLQEFERRIAYSKFQIASFIKTHIFSRRRPIDGWKYMIEVVGPNAKRGKCSVSRVPSL 275
           DILLQEF+RR A+ KFQIASFIK HIFSRRRPIDGWKYMIEV+GPNA++GK SVSR+P+L
Sbjct: 234 DILLQEFDRRTAFCKFQIASFIKQHIFSRRRPIDGWKYMIEVIGPNARKGKGSVSRLPAL 293

Query: 276 SDPSTQPFKEETTSV 290
           SD STQPFKEET+S+
Sbjct: 294 SDVSTQPFKEETSSL 308


>AT5G62270.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: mucin-related (TAIR:AT2G02880.1); Has 35333 Blast
           hits to 34131 proteins in 2444 species: Archae - 798;
           Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants -
           531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
           BLink). | chr5:25012227-25014007 FORWARD LENGTH=383
          Length = 383

 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 111/191 (58%), Gaps = 4/191 (2%)

Query: 111 EENGALYSVENMKKDYRLKKQKLHAGLWMKEIEKLEEAKLGDSDSPAGDDIQRLLDSCSD 170
           +EN  +Y++E + KDYR+ +Q++HA L++KE E+ EE KLG    P  D + RLLD   +
Sbjct: 194 KENPEVYTIERLAKDYRIMRQRVHAILFLKEDEEEEERKLG---RPLDDSVDRLLDEYPE 250

Query: 171 IFDTGNNDLNNAKVETS-EFKNMPDGWETISKNQEGNVWEMSQREEDILLQEFERRIAYS 229
            F + + + + A +    +FK MP+GW+   K+ +   +E+S++E+D+L +EF RR  ++
Sbjct: 251 FFISHDREFHVASLNYKPDFKVMPEGWDGTIKDMDEVHYEISKKEDDMLYEEFVRRFEFN 310

Query: 230 KFQIASFIKTHIFSRRRPIDGWKYMIEVVGPNAKRGKCSVSRVPSLSDPSTQPFKEETTS 289
           K +    +  H +SRRR  +GWK  +E +G   KRG     +  SL D S++P  E    
Sbjct: 311 KMKWRGEVMCHKYSRRRSSEGWKITVEKLGAKGKRGAGGGWKFMSLPDGSSRPLNEMEKV 370

Query: 290 VDKAYIPHQRR 300
             K   P +RR
Sbjct: 371 YVKRETPLRRR 381


>AT5G62270.2 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; BEST Arabidopsis thaliana
           protein match is: mucin-related (TAIR:AT2G02880.1). |
           chr5:25012227-25014486 FORWARD LENGTH=420
          Length = 420

 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 111/191 (58%), Gaps = 4/191 (2%)

Query: 111 EENGALYSVENMKKDYRLKKQKLHAGLWMKEIEKLEEAKLGDSDSPAGDDIQRLLDSCSD 170
           +EN  +Y++E + KDYR+ +Q++HA L++KE E+ EE KLG    P  D + RLLD   +
Sbjct: 194 KENPEVYTIERLAKDYRIMRQRVHAILFLKEDEEEEERKLG---RPLDDSVDRLLDEYPE 250

Query: 171 IFDTGNNDLNNAKVETS-EFKNMPDGWETISKNQEGNVWEMSQREEDILLQEFERRIAYS 229
            F + + + + A +    +FK MP+GW+   K+ +   +E+S++E+D+L +EF RR  ++
Sbjct: 251 FFISHDREFHVASLNYKPDFKVMPEGWDGTIKDMDEVHYEISKKEDDMLYEEFVRRFEFN 310

Query: 230 KFQIASFIKTHIFSRRRPIDGWKYMIEVVGPNAKRGKCSVSRVPSLSDPSTQPFKEETTS 289
           K +    +  H +SRRR  +GWK  +E +G   KRG     +  SL D S++P  E    
Sbjct: 311 KMKWRGEVMCHKYSRRRSSEGWKITVEKLGAKGKRGAGGGWKFMSLPDGSSRPLNEMEKV 370

Query: 290 VDKAYIPHQRR 300
             K   P +RR
Sbjct: 371 YVKRETPLRRR 381