Miyakogusa Predicted Gene

Lj2g3v1294210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1294210.1 Non Chatacterized Hit- tr|I1IFA4|I1IFA4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,42.2,7e-19,TB2_DP1_HVA22,TB2/DP1/HVA22-related protein; HVA22-LIKE
PROTEIN,NULL; HVA22-LIKE PROTEINS,TB2/DP1/HV,CUFF.36707.1
         (132 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G69700.1 | Symbols: ATHVA22C, HVA22C | HVA22 homologue C | ch...   143   3e-35
AT1G74520.1 | Symbols: ATHVA22A, HVA22A | HVA22 homologue A | ch...   114   2e-26
AT5G62490.1 | Symbols: ATHVA22B, HVA22B | HVA22 homologue B | ch...    79   1e-15
AT2G42820.1 | Symbols: HVA22F | HVA22-like protein F | chr2:1781...    58   2e-09
AT5G50720.1 | Symbols: ATHVA22E, HVA22E | HVA22 homologue E | ch...    46   6e-06

>AT1G69700.1 | Symbols: ATHVA22C, HVA22C | HVA22 homologue C |
           chr1:26220337-26221663 FORWARD LENGTH=184
          Length = 184

 Score =  143 bits (361), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 74/139 (53%), Positives = 90/139 (64%), Gaps = 20/139 (14%)

Query: 1   MITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYRYYVRPFYMNXXXXXXXX 60
           +I+LFELTF+K LE   IWPY KL   CWLVLP FNGA H+Y++++RPFY +        
Sbjct: 59  LISLFELTFSKPLEWFPIWPYMKLFGICWLVLPQFNGAEHIYKHFIRPFYRD-------- 110

Query: 61  XXXXXXXXGTSHMWYVPRK--NIFSKR--DDVLYAAERYMEEHGTEEFQRLITKADREAR 116
                    T+ +WYVP K  N F KR  DD+L AAE+YME+HGTE F+R+I K D   R
Sbjct: 111 -----PQRATTKIWYVPHKKFNFFPKRDDDDILTAAEKYMEQHGTEAFERMIVKKDSYER 165

Query: 117 SRRS---GNHMIFDDDYRY 132
            R S    NHMIFDDDYRY
Sbjct: 166 GRSSRGINNHMIFDDDYRY 184


>AT1G74520.1 | Symbols: ATHVA22A, HVA22A | HVA22 homologue A |
           chr1:28008109-28009156 REVERSE LENGTH=177
          Length = 177

 Score =  114 bits (285), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 84/120 (70%), Gaps = 16/120 (13%)

Query: 1   MITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYRYYVRPFYMNXXXXXXXX 60
           ++TL ELTFAK++E L IW Y KLIL+CWLV+P+F+GAA+VY ++VRP ++N        
Sbjct: 57  LLTLIELTFAKLIEWLPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPVFVNPR------ 110

Query: 61  XXXXXXXXGTSHMWYVPRK-NIFSKRDDVLYAAERYMEEHGTEEFQRLITKADREARSRR 119
                    + ++WYVP+K +IF K DDVL AAE+Y+ E+G + F++++++AD+  R  +
Sbjct: 111 ---------SINIWYVPKKMDIFRKPDDVLTAAEKYIAENGPDAFEKILSRADKSKRYNK 161


>AT5G62490.1 | Symbols: ATHVA22B, HVA22B | HVA22 homologue B |
           chr5:25090206-25091345 FORWARD LENGTH=167
          Length = 167

 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 25/134 (18%)

Query: 1   MITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYRYYVRPFYMNXXXXXXXX 60
           +I LFELTF ++LE + ++PYAKL L+ WLVLP  NGAA++Y +YVR F ++        
Sbjct: 57  LIKLFELTFFRLLEWIPLYPYAKLALTSWLVLPGMNGAAYLYEHYVRSFLLSPH------ 110

Query: 61  XXXXXXXXGTSHMWYVPRKNIFSKRDDVLYAAERY--MEEHGTEEFQRLITKADREARSR 118
                    T ++WYVP K    K DD+   A ++  + + G  + +++++  D  A+  
Sbjct: 111 ---------TVNVWYVPAK----KDDDLGATAGKFTPVNDSGAPQ-EKIVSSVDTSAKYV 156

Query: 119 RSGNHMIFDDDYRY 132
               H  FDD Y Y
Sbjct: 157 ---GHSAFDDAYIY 167


>AT2G42820.1 | Symbols: HVA22F | HVA22-like protein F |
           chr2:17817460-17818301 REVERSE LENGTH=158
          Length = 158

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 11/116 (9%)

Query: 1   MITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYRYYVRPFYMNXXXXXXXX 60
           +IT+FEL+  +VL  L  WPY KL+   WLVLP F+GAA++Y  +VR +           
Sbjct: 52  LITIFELSVWRVLAWLPFWPYLKLLFCMWLVLPMFSGAAYIYSNFVRQY----------- 100

Query: 61  XXXXXXXXGTSHMWYVPRKNIFSKRDDVLYAAERYMEEHGTEEFQRLITKADREAR 116
                   G ++     R+ +     D   + + Y++  G +  ++ I  A++E R
Sbjct: 101 VKIGMNVGGGTNYTDEQRRVLQMMSLDARKSVQDYVDRFGWDSVEKAIKAAEKETR 156


>AT5G50720.1 | Symbols: ATHVA22E, HVA22E | HVA22 homologue E |
          chr5:20633442-20634502 REVERSE LENGTH=116
          Length = 116

 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%)

Query: 2  ITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYRYYVR 47
          +TL EL    +LE + IW  AKL+   WLVLP F GAA +Y   VR
Sbjct: 53 LTLSELILQSLLEWIPIWYTAKLVFVAWLVLPQFRGAAFIYNKVVR 98