Miyakogusa Predicted Gene

Lj2g3v1280020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1280020.1 Non Chatacterized Hit- tr|I3T7X2|I3T7X2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUR2
HYDROXYLASE/DESATURASE,NULL; STEROL DESATURASE,NULL;
FA_hydroxylase,Fatty acid hydroxylase; seg,CUFF.36694.1
         (158 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G69640.1 | Symbols: SBH1 | sphingoid base hydroxylase 1 | chr...   279   6e-76
AT1G14290.1 | Symbols: SBH2 | sphingoid base hydroxylase 2 | chr...   267   2e-72
AT2G29390.4 | Symbols: ATSMO2 | sterol 4-alpha-methyl-oxidase 2-...    62   2e-10
AT2G29390.2 | Symbols: ATSMO2 | sterol 4-alpha-methyl-oxidase 2-...    62   2e-10
AT2G29390.5 | Symbols: ATSMO2 | sterol 4-alpha-methyl-oxidase 2-...    61   3e-10
AT2G29390.3 | Symbols: ATSMO2 | sterol 4-alpha-methyl-oxidase 2-...    61   3e-10
AT2G29390.1 | Symbols: SMO2-2, ATSMO2 | sterol 4-alpha-methyl-ox...    60   5e-10
AT1G07420.1 | Symbols: ATSMO2, SMO2-1 | sterol 4-alpha-methyl-ox...    58   3e-09
AT1G07420.2 | Symbols: ATSMO2, SMO2-1 | sterol 4-alpha-methyl-ox...    58   3e-09
AT4G22756.1 | Symbols: SMO1-2, ATSMO1, ATSMO1-2, SMO1 | sterol C...    46   9e-06

>AT1G69640.1 | Symbols: SBH1 | sphingoid base hydroxylase 1 |
           chr1:26193933-26195466 REVERSE LENGTH=260
          Length = 260

 Score =  279 bits (713), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 125/158 (79%), Positives = 138/158 (87%)

Query: 1   MLVMDTWQYFLHRYMHQNKFLYKHIHSQHHRLIVPYSFGALYNHPVEGLLNDTVGGALSF 60
           M+V+DTWQYF+HRYMHQNKFLYKHIHSQHHRLIVPY++GALYNHPVEGLL DT+GGALSF
Sbjct: 103 MIVLDTWQYFMHRYMHQNKFLYKHIHSQHHRLIVPYAYGALYNHPVEGLLLDTIGGALSF 162

Query: 61  LISGMXXXXXXXXXXXXTIKTVDDHCGLWLPGNLFQMFFQNNCAYHDVHHQLYGNKYNFS 120
           L+SGM            TIKTVDDHCGLWLPGNLF M F+NN AYHD+HHQLYG KYNFS
Sbjct: 163 LVSGMSPRTSIFFFSFATIKTVDDHCGLWLPGNLFHMVFKNNSAYHDIHHQLYGTKYNFS 222

Query: 121 QPFFVMWDRILGTYMPYRLEKREGGGFESRPCKDYKDE 158
           QPFFVMWDRILGTYMPY LEKRE GGFE+RP K++KD+
Sbjct: 223 QPFFVMWDRILGTYMPYSLEKREDGGFEARPTKEFKDD 260


>AT1G14290.1 | Symbols: SBH2 | sphingoid base hydroxylase 2 |
           chr1:4880307-4881784 REVERSE LENGTH=259
          Length = 259

 Score =  267 bits (683), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 124/158 (78%), Positives = 132/158 (83%)

Query: 1   MLVMDTWQYFLHRYMHQNKFLYKHIHSQHHRLIVPYSFGALYNHPVEGLLNDTVGGALSF 60
           MLV+DTWQYF+HRYMH NKFLYKHIHSQHHRLIVPYS+GALYNHP+EGLL DT+GGALSF
Sbjct: 102 MLVIDTWQYFIHRYMHLNKFLYKHIHSQHHRLIVPYSYGALYNHPLEGLLLDTIGGALSF 161

Query: 61  LISGMXXXXXXXXXXXXTIKTVDDHCGLWLPGNLFQMFFQNNCAYHDVHHQLYGNKYNFS 120
           L SGM            TIKTVDDHCGLWLPGN F +FF NN AYHDVHHQLYG KYNFS
Sbjct: 162 LFSGMSPRTAIFFFSFATIKTVDDHCGLWLPGNPFHIFFSNNSAYHDVHHQLYGTKYNFS 221

Query: 121 QPFFVMWDRILGTYMPYRLEKREGGGFESRPCKDYKDE 158
           QPFFVMWDRILGTY+PY LEKR  GGFE+RP K  KDE
Sbjct: 222 QPFFVMWDRILGTYLPYSLEKRANGGFETRPIKVSKDE 259


>AT2G29390.4 | Symbols: ATSMO2 | sterol 4-alpha-methyl-oxidase 2-2 |
           chr2:12610758-12611731 REVERSE LENGTH=177
          Length = 177

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 64/140 (45%), Gaps = 15/140 (10%)

Query: 9   YFLHRYMHQNKFLYKHIHSQHHRLIVPYSFGALYNHPVEGL---LNDTVGGALSFLISGM 65
           Y+ HR +H  K+LYK++HS HH    P+   + Y HP E L       VG AL    +G 
Sbjct: 41  YWGHRILH-TKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAL----TGP 95

Query: 66  XXXXXXXXXXXXTIKTVDDHCGL---WLPGNLFQMFFQNNCAYHDVHHQ-LYGNKYNFSQ 121
                        I+TV+ HCG    W P N   ++      +HD HH+ LY    N+S 
Sbjct: 96  HLITLWLWMMLRVIETVEAHCGYHFPWSPSNFLPLY--GGADFHDYHHRLLYTKSGNYSS 153

Query: 122 PFFVMWDRILGTYMPYRLEK 141
            F  M D I GT   YR  K
Sbjct: 154 TFVYM-DWIFGTDKGYRKLK 172


>AT2G29390.2 | Symbols: ATSMO2 | sterol 4-alpha-methyl-oxidase 2-2 |
           chr2:12610758-12612799 REVERSE LENGTH=260
          Length = 260

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 66/144 (45%), Gaps = 15/144 (10%)

Query: 2   LVMDTWQYFLHRYMHQNKFLYKHIHSQHHRLIVPYSFGALYNHPVEGL---LNDTVGGAL 58
           ++ D   Y+ HR +H  K+LYK++HS HH    P+   + Y HP E L       VG AL
Sbjct: 117 IIEDFVFYWGHRILH-TKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAL 175

Query: 59  SFLISGMXXXXXXXXXXXXTIKTVDDHCGL---WLPGNLFQMFFQNNCAYHDVHHQ-LYG 114
               +G              I+TV+ HCG    W P N   ++      +HD HH+ LY 
Sbjct: 176 ----TGPHLITLWLWMMLRVIETVEAHCGYHFPWSPSNFLPLY--GGADFHDYHHRLLYT 229

Query: 115 NKYNFSQPFFVMWDRILGTYMPYR 138
              N+S  F  M D I GT   YR
Sbjct: 230 KSGNYSSTFVYM-DWIFGTDKGYR 252


>AT2G29390.5 | Symbols: ATSMO2 | sterol 4-alpha-methyl-oxidase 2-2 |
           chr2:12610758-12611929 REVERSE LENGTH=219
          Length = 219

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 63/137 (45%), Gaps = 15/137 (10%)

Query: 9   YFLHRYMHQNKFLYKHIHSQHHRLIVPYSFGALYNHPVEGL---LNDTVGGALSFLISGM 65
           Y+ HR +H  K+LYK++HS HH    P+   + Y HP E L       VG AL    +G 
Sbjct: 83  YWGHRILH-TKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAL----TGP 137

Query: 66  XXXXXXXXXXXXTIKTVDDHCGL---WLPGNLFQMFFQNNCAYHDVHHQ-LYGNKYNFSQ 121
                        I+TV+ HCG    W P N   ++      +HD HH+ LY    N+S 
Sbjct: 138 HLITLWLWMMLRVIETVEAHCGYHFPWSPSNFLPLY--GGADFHDYHHRLLYTKSGNYSS 195

Query: 122 PFFVMWDRILGTYMPYR 138
            F  M D I GT   YR
Sbjct: 196 TFVYM-DWIFGTDKGYR 211


>AT2G29390.3 | Symbols: ATSMO2 | sterol 4-alpha-methyl-oxidase 2-2 |
           chr2:12610758-12612149 REVERSE LENGTH=253
          Length = 253

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 66/144 (45%), Gaps = 15/144 (10%)

Query: 2   LVMDTWQYFLHRYMHQNKFLYKHIHSQHHRLIVPYSFGALYNHPVEGL---LNDTVGGAL 58
           ++ D   Y+ HR +H  K+LYK++HS HH    P+   + Y HP E L       VG AL
Sbjct: 110 IIEDFVFYWGHRILH-TKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAL 168

Query: 59  SFLISGMXXXXXXXXXXXXTIKTVDDHCGL---WLPGNLFQMFFQNNCAYHDVHHQ-LYG 114
               +G              I+TV+ HCG    W P N   ++      +HD HH+ LY 
Sbjct: 169 ----TGPHLITLWLWMMLRVIETVEAHCGYHFPWSPSNFLPLY--GGADFHDYHHRLLYT 222

Query: 115 NKYNFSQPFFVMWDRILGTYMPYR 138
              N+S  F  M D I GT   YR
Sbjct: 223 KSGNYSSTFVYM-DWIFGTDKGYR 245


>AT2G29390.1 | Symbols: SMO2-2, ATSMO2 | sterol
           4-alpha-methyl-oxidase 2-2 | chr2:12610758-12612799
           REVERSE LENGTH=272
          Length = 272

 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 65/147 (44%), Gaps = 23/147 (15%)

Query: 9   YFLHRYMHQNKFLYKHIHSQHHRLIVPYSFGALYNHPVEGL---LNDTVGGALSFLISGM 65
           Y+ HR +H  K+LYK++HS HH    P+   + Y HP E L       VG AL    +G 
Sbjct: 124 YWGHRILH-TKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAL----TGP 178

Query: 66  XXXXXXXXXXXXTIKTVDDHCGL---WLPGNLFQMF----------FQNNCAYHDVHHQ- 111
                        I+TV+ HCG    W P N   ++          F  +  +HD HH+ 
Sbjct: 179 HLITLWLWMMLRVIETVEAHCGYHFPWSPSNFLPLYGGSLILMWESFAYSADFHDYHHRL 238

Query: 112 LYGNKYNFSQPFFVMWDRILGTYMPYR 138
           LY    N+S  F  M D I GT   YR
Sbjct: 239 LYTKSGNYSSTFVYM-DWIFGTDKGYR 264


>AT1G07420.1 | Symbols: ATSMO2, SMO2-1 | sterol
           4-alpha-methyl-oxidase 2-1 | chr1:2277910-2280033
           FORWARD LENGTH=266
          Length = 266

 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 69/151 (45%), Gaps = 13/151 (8%)

Query: 2   LVMDTWQYFLHRYMHQNKFLYKHIHSQHHRLIVPYSFGALYNHPVEGL---LNDTVGGAL 58
           ++ D   Y+ HR +H +K+LYK++HS HH    P+   + Y HP E L       VG AL
Sbjct: 117 IIEDFVFYWGHRILH-SKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAL 175

Query: 59  SFLISGMXXXXXXXXXXXXTIKTVDDHCGLWLPGNLFQMF-FQNNCAYHDVHHQ-LYGNK 116
               +G              ++TV+ HCG   P +L           +HD HH+ LY   
Sbjct: 176 ----TGPHLITLWLWMVLRVLETVEAHCGYHFPWSLSNFLPLYGGADFHDYHHRLLYTKS 231

Query: 117 YNFSQPFFVMWDRILGTYMPYRLEK--REGG 145
            N+S  F  M D I GT   YR  K  +E G
Sbjct: 232 GNYSSTFVYM-DWIFGTDKGYRRLKTLKENG 261


>AT1G07420.2 | Symbols: ATSMO2, SMO2-1 | sterol
           4-alpha-methyl-oxidase 2-1 | chr1:2278918-2280033
           FORWARD LENGTH=228
          Length = 228

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 66/144 (45%), Gaps = 13/144 (9%)

Query: 9   YFLHRYMHQNKFLYKHIHSQHHRLIVPYSFGALYNHPVEGL---LNDTVGGALSFLISGM 65
           Y+ HR +H +K+LYK++HS HH    P+   + Y HP E L       VG AL    +G 
Sbjct: 86  YWGHRILH-SKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAL----TGP 140

Query: 66  XXXXXXXXXXXXTIKTVDDHCGLWLPGNLFQMF-FQNNCAYHDVHHQ-LYGNKYNFSQPF 123
                        ++TV+ HCG   P +L           +HD HH+ LY    N+S  F
Sbjct: 141 HLITLWLWMVLRVLETVEAHCGYHFPWSLSNFLPLYGGADFHDYHHRLLYTKSGNYSSTF 200

Query: 124 FVMWDRILGTYMPYRLEK--REGG 145
             M D I GT   YR  K  +E G
Sbjct: 201 VYM-DWIFGTDKGYRRLKTLKENG 223


>AT4G22756.1 | Symbols: SMO1-2, ATSMO1, ATSMO1-2, SMO1 | sterol
           C4-methyl oxidase 1-2 | chr4:11955124-11956695 REVERSE
           LENGTH=299
          Length = 299

 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 60/145 (41%), Gaps = 9/145 (6%)

Query: 2   LVMDTWQYFLHRYMHQNKFLYKHIHSQHHRLIVPYSFGALYNHPVEGLLNDTVGGALSFL 61
           LV D   Y++HR+ H  K+ Y+  H  HH    P  + A Y H  E LL     G  +FL
Sbjct: 137 LVEDYTNYWVHRFFH-CKWGYEKFHHIHHEYTAPIGYAAPYAHWAEVLLL----GIPTFL 191

Query: 62  ---ISGMXXXXXXXXXXXXTIKTVDDHCGLWLPGNLFQMF-FQNNCAYHDVHHQLYGNKY 117
              I+               I+ ++ H G   P +L +   F     YHD HH + G   
Sbjct: 192 GPAIAPGHMITFWLWIALRQIEAIETHSGYDFPWSLTKYIPFYGGAEYHDYHHYVGGQSQ 251

Query: 118 NFSQPFFVMWDRILGTYMPYRLEKR 142
           +     F   D I GT   YR +K+
Sbjct: 252 SNFASVFTYCDYIYGTDKGYRFQKK 276