Miyakogusa Predicted Gene
- Lj2g3v1278950.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1278950.2 Non Chatacterized Hit- tr|B9S5L8|B9S5L8_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,38.85,5e-19,HLH, helix-loop-helix DNA-binding
domain,Helix-loop-helix domain; seg,NULL; helix loop helix
domain,,CUFF.36682.2
(185 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH) DNA-... 142 2e-34
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 84 5e-17
AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 2e-12
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 4e-12
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 5e-12
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 5e-12
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 1e-11
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL... 65 3e-11
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 3e-11
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 63 1e-10
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 63 1e-10
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 63 1e-10
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 61 4e-10
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 1e-09
AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 2e-09
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ... 59 2e-09
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 58 4e-09
AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 57 1e-08
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 57 1e-08
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 57 1e-08
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 56 1e-08
AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 56 2e-08
AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 54 5e-08
AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 54 5e-08
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 7e-08
AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 1e-07
AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHL... 52 2e-07
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-... 52 2e-07
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 52 2e-07
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 52 2e-07
AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 | ch... 52 2e-07
AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHL... 51 4e-07
AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 4e-07
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 5e-07
AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 5e-07
AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH) DNA-... 50 8e-07
AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 49 2e-06
AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 49 3e-06
AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 48 3e-06
AT5G43175.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 47 5e-06
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 47 5e-06
>AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:11349922-11350694
FORWARD LENGTH=207
Length = 207
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 9/184 (4%)
Query: 8 DDAKTFKSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQVXX 67
++ + FKS NLE ER+RREKL RL+ LRS VPIVTNM KA+I++DAITYI ELQ+ V
Sbjct: 24 EEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKN 83
Query: 68 XXXXXXXXXXXXSK-------EVAKPKINDFDLAEEMKKWGIQEEVHVTKIDGNKLWVKM 120
+ + KP++ DL EEMKK GI+E V + KI K W+K+
Sbjct: 84 LLETFHEMEEAPPEIDEEQTDPMIKPEVETSDLNEEMKKLGIEENVQLCKIGERKFWLKI 143
Query: 121 IIENKRGSFKKLVEFLDTYGIALIDTNLTAMKGALLITTCIQGMDGQTLEVEQINQWLLD 180
I E + G F K +E + G +ID +LT GA+LI+ +Q + +VEQ +LL+
Sbjct: 144 ITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILISASVQTQ--ELCDVEQTKDFLLE 201
Query: 181 ILRA 184
++R+
Sbjct: 202 VMRS 205
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 84.3 bits (207), Expect = 5e-17, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 26/196 (13%)
Query: 14 KSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQVXXXXXXXX 73
++KNL ER+RR+KL+ RL LRSLVP +T +++A+I+ DAI Y+KELQ++
Sbjct: 312 QAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELE 371
Query: 74 XXXXXX------------------------SKEVAKPKI-NDFDLAEEMKK-WGIQEEVH 107
S P + D DL K ++ +V
Sbjct: 372 ENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVD 431
Query: 108 VTKIDGNKLWVKMIIENKRGSFKKLVEFLDTYGIALIDTNLTAMKGALLITTCIQGMDGQ 167
V ++DG + +VK+I E K G F +L+E LD+ G+ + + N T + ++ D +
Sbjct: 432 VAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVEKNDNE 491
Query: 168 TLEVEQINQWLLDILR 183
++ E + LL+I R
Sbjct: 492 MVQAEHVRNSLLEITR 507
>AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3506463-3508752 FORWARD
LENGTH=441
Length = 441
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 14/152 (9%)
Query: 11 KTFKSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQVXXXXX 70
+ FKSKNL ERKRRE+++ + LR++VP +T +NK I DA+ YI EL +
Sbjct: 259 ENFKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLED 318
Query: 71 XXXXXXXXXSKEVA---KPKINDFDLA-------EEMKKWGIQEEVHVTKIDGNK-LWVK 119
KE+A + I D + + +KK ++ EVH T G + ++
Sbjct: 319 ELKGINEMECKEIAAEEQSAIADPEAERVSSKSNKRVKKNEVKIEVHET---GERDFLIR 375
Query: 120 MIIENKRGSFKKLVEFLDTYGIALIDTNLTAM 151
++ E+K+ FK+L+E +D + +ID N T +
Sbjct: 376 VVQEHKQDGFKRLIEAVDLCELEIIDVNFTRL 407
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 5 SYDDDAKTFKSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQ 64
S D A + SKN+ ER RR+KL+ RL LRS+VP +T M+KA+II DAI+YI+ LQ +
Sbjct: 43 SPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYE 102
Query: 65 VXXXXXXXXXXXXXXSKEVAKPKINDFDL-----AEEMKKWGIQE--------EVHVTKI 111
++ K D DL +++MK+ E+ VT +
Sbjct: 103 EKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFM 162
Query: 112 DGNKLWVKMIIENKR-GSFKKLVEFLDTYGIALIDTNLTAMKGALLITTCIQG 163
G + V + NKR + KL E ++ + ++ +NLT+ G + T I+
Sbjct: 163 -GERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEA 214
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 5 SYDDDAKTFKSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQ 64
S D A + SKN+ ER RR+KL+ RL LRS+VP +T M+KA+II DAI+YI+ LQ +
Sbjct: 44 SPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYE 103
Query: 65 VXXXXXXXXXXXXXXSKEVAKPKINDFDL-----AEEMKKWGIQE--------EVHVTKI 111
++ K D DL +++MK+ E+ VT +
Sbjct: 104 EKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFM 163
Query: 112 DGNKLWVKMIIENKR-GSFKKLVEFLDTYGIALIDTNLTAMKGALLITTCIQ 162
G + V + NKR + KL E ++ + ++ +NLT+ G + T I+
Sbjct: 164 -GERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIE 214
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 5 SYDDDAKTFKSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQ 64
S D A + SKN+ ER RR+KL+ RL LRS+VP +T M+KA+II DAI+YI+ LQ +
Sbjct: 44 SPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYE 103
Query: 65 VXXXXXXXXXXXXXXSKEVAKPKINDFDL-----AEEMKKWGIQE--------EVHVTKI 111
++ K D DL +++MK+ E+ VT +
Sbjct: 104 EKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFM 163
Query: 112 DGNKLWVKMIIENKR-GSFKKLVEFLDTYGIALIDTNLTAMKGALLITTCIQ 162
G + V + NKR + KL E ++ + ++ +NLT+ G + T I+
Sbjct: 164 -GERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIE 214
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 13/171 (7%)
Query: 5 SYDDDAKTFKSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQ 64
S D A + SKN+ ER RR+KL+ RL LRS+VP +T M+KA+II DAI+YI+ LQ +
Sbjct: 44 SPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYE 103
Query: 65 VXXXXXXXXXXXXXXSKEVAKPKINDFDL-----AEEMKKWGIQE--------EVHVTKI 111
++ K D DL +++MK+ E+ VT +
Sbjct: 104 EKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFM 163
Query: 112 DGNKLWVKMIIENKRGSFKKLVEFLDTYGIALIDTNLTAMKGALLITTCIQ 162
+ V + + + KL E ++ + ++ +NLT+ G + T I+
Sbjct: 164 GERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIE 214
>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:4384758-4386392
FORWARD LENGTH=450
Length = 450
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 11/178 (6%)
Query: 14 KSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQVXXXXXXXX 73
+KNL ER+RR+KL+ RL MLRS+VP ++ M++A+I+ DAI Y+KEL ++
Sbjct: 265 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELE 324
Query: 74 XXXXXXS---KEVAKPKINDFDLAEEM-------KKWGIQEEVHVTKIDGNKLWVKMIIE 123
S P+ + + EE+ G Q V V +G + + M
Sbjct: 325 STPPSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFCG 384
Query: 124 NKRGSFKKLVEFLDTYGIALIDTNLTAMKG-ALLITTCIQGMDGQTLEVEQINQWLLD 180
+ G + LD G+ + ++ G AL + Q + + EQI LLD
Sbjct: 385 RRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDVLPEQIKAVLLD 442
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=225
Length = 225
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 2 GRRSYDDDAKT--FKSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIK 59
G S D A T SKN+ ER RR+KL+ RL LRS+VP ++ ++KA++I D+I Y++
Sbjct: 38 GESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQ 97
Query: 60 ELQDQVXXXXXXXXXXXXXXSKEVAKPKINDFDLAEEMKKWGIQE-EVHVTKIDGNKLWV 118
EL DQ S + P D + ++ + I+ E+ VT + + V
Sbjct: 98 ELIDQ-EKTLEAEIRELESRSTLLENP----MDYSTRVQHYPIEVLEMKVTWMGEKTVVV 152
Query: 119 KMIIENKRGSFKKLVEFLDTYGIALIDTNLTAMKGALLITTCIQGMDGQTLEVE 172
+ KR + +L + L++ + ++ TN ++ L T +Q + ++ VE
Sbjct: 153 CITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQADEEESSAVE 206
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 15/182 (8%)
Query: 14 KSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV-------- 65
+KNL ER+RR+KL+ RL MLRS+VP ++ M++A+I+ DAI Y+KEL ++
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
Query: 66 XXXXXXXXXXXXXXSKEVAKPKINDFDLAEEM------KKWGIQEEVHVTKIDGNKLWVK 119
P+ + EE+ G Q V V +G + +
Sbjct: 365 STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIH 424
Query: 120 MIIENKRGSFKKLVEFLDTYGIALIDTNLTAMKG-ALLITTCIQGMDGQTLEVEQINQWL 178
M + G ++ LD G+ + ++ G AL + Q +GQ + +QI L
Sbjct: 425 MFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAVL 484
Query: 179 LD 180
D
Sbjct: 485 FD 486
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 15/182 (8%)
Query: 14 KSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV-------- 65
+KNL ER+RR+KL+ RL MLRS+VP ++ M++A+I+ DAI Y+KEL ++
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
Query: 66 XXXXXXXXXXXXXXSKEVAKPKINDFDLAEEM------KKWGIQEEVHVTKIDGNKLWVK 119
P+ + EE+ G Q V V +G + +
Sbjct: 365 STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIH 424
Query: 120 MIIENKRGSFKKLVEFLDTYGIALIDTNLTAMKG-ALLITTCIQGMDGQTLEVEQINQWL 178
M + G ++ LD G+ + ++ G AL + Q +GQ + +QI L
Sbjct: 425 MFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAVL 484
Query: 179 LD 180
D
Sbjct: 485 FD 486
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 15/182 (8%)
Query: 14 KSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV-------- 65
+KNL ER+RR+KL+ RL MLRS+VP ++ M++A+I+ DAI Y+KEL ++
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
Query: 66 XXXXXXXXXXXXXXSKEVAKPKINDFDLAEEM------KKWGIQEEVHVTKIDGNKLWVK 119
P+ + EE+ G Q V V +G + +
Sbjct: 365 STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIH 424
Query: 120 MIIENKRGSFKKLVEFLDTYGIALIDTNLTAMKG-ALLITTCIQGMDGQTLEVEQINQWL 178
M + G ++ LD G+ + ++ G AL + Q +GQ + +QI L
Sbjct: 425 MFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAVL 484
Query: 179 LD 180
D
Sbjct: 485 FD 486
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 41/49 (83%)
Query: 17 NLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
++E ER+RREKL+ R LRS+VP ++ M+KA+++ DAI+YIKELQ++V
Sbjct: 396 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKV 444
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=254
Length = 254
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 27/198 (13%)
Query: 2 GRRSYDDDAKT--FKSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIK 59
G S D A T SKN+ ER RR+KL+ RL LRS+VP ++ ++KA++I D+I Y++
Sbjct: 38 GESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQ 97
Query: 60 ELQDQ----------VXXXXXXXXXXXXXXSKEVAKPKINDF--------------DLAE 95
EL DQ + A+ + DF D +
Sbjct: 98 ELIDQEKTLEAEIRELESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYST 157
Query: 96 EMKKWGIQE-EVHVTKIDGNKLWVKMIIENKRGSFKKLVEFLDTYGIALIDTNLTAMKGA 154
++ + I+ E+ VT + + V + KR + +L + L++ + ++ TN ++
Sbjct: 158 RVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSR 217
Query: 155 LLITTCIQGMDGQTLEVE 172
L T +Q + ++ VE
Sbjct: 218 LSTTLFLQADEEESSAVE 235
>AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645505 FORWARD
LENGTH=263
Length = 263
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 2 GRRSYDDDAKT--FKSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIK 59
G S D A T SKN+ ER RR+KL+ RL LRS+VP ++ ++KA++I D+I Y++
Sbjct: 38 GESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQ 97
Query: 60 ELQDQ 64
EL DQ
Sbjct: 98 ELIDQ 102
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29,
ATFIT1 | FER-like regulator of iron uptake |
chr2:12004713-12005908 FORWARD LENGTH=318
Length = 318
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 40/55 (72%)
Query: 11 KTFKSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
KT +S+ L ER+RR ++ +L LRSLVP +T M+KA+I+ DA+ Y++ELQ Q
Sbjct: 126 KTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQA 180
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645168 FORWARD
LENGTH=184
Length = 184
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 2 GRRSYDDDAKTFK--SKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIK 59
G S D A T SKN+ ER RR+KL+ RL LRS+VP ++ ++KA++I D+I Y++
Sbjct: 38 GESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQ 97
Query: 60 ELQDQ 64
EL DQ
Sbjct: 98 ELIDQ 102
>AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 2 GRRSYDDDAKTFKSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKEL 61
GRR + A+ ++E ER+RREKL+ R LRS+VP ++ M+KA+++ DA++YI EL
Sbjct: 421 GRRPANGRAEALN--HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINEL 478
Query: 62 QDQV 65
++
Sbjct: 479 HAKL 482
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 2 GRRSYDDDAKTFKSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKEL 61
GRR + A+ ++E ER+RREKL+ R LRS+VP ++ M+KA+++ DA++YI EL
Sbjct: 421 GRRPANGRAEALN--HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINEL 478
Query: 62 QDQV 65
++
Sbjct: 479 HAKL 482
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 2 GRRSYDDDAKTFKSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKEL 61
GRR + A+ ++E ER+RREKL+ R LRS+VP ++ M+KA+++ DA++YI EL
Sbjct: 421 GRRPANGRAEALN--HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINEL 478
Query: 62 QDQV 65
++
Sbjct: 479 HAKL 482
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
Basic helix-loop-helix (bHLH) DNA-binding family protein
| chr1:11799042-11800913 REVERSE LENGTH=623
Length = 623
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 38/49 (77%)
Query: 17 NLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
++E ER+RREKL+ R LR++VP V+ M+KA+++ DAI YI EL+ +V
Sbjct: 453 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKV 501
>AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:9267599-9269002 FORWARD
LENGTH=467
Length = 467
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 39/49 (79%)
Query: 17 NLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
++E ER+RREKL+ R LR++VP ++ M+KA+++ DAITYI ++Q ++
Sbjct: 321 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKI 369
>AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr4:9933702-9935471 REVERSE LENGTH=589
Length = 589
Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 39/49 (79%)
Query: 17 NLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
++E ER+RREKL+ R LR++VP V+ M+KA+++ DAI+YI EL+ ++
Sbjct: 417 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKL 465
>AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:18974231-18976009 FORWARD
LENGTH=592
Length = 592
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 39/49 (79%)
Query: 17 NLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
++E ER+RREKL+ R LR++VP V+ M+KA+++ DAI+YI EL+ ++
Sbjct: 416 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKL 464
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9678012-9679165 FORWARD
LENGTH=295
Length = 295
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Query: 21 ERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQVXXXXXXXXXXXXXXS 80
ERKRREKLS + + L +L+P + +K TI+DDAI+ +K+LQ+Q+ S
Sbjct: 124 ERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEATRQMES 183
Query: 81 KEVAKPKINDFDLAEEMKKWGIQEEVHV----------TKIDGNKLWVKMIIENKRGSFK 130
+ K FD E VH+ KI N + ++++ E +G
Sbjct: 184 MILVKKSKVFFD---EEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRILCEKSKGCMI 240
Query: 131 KLVEFLDTYGIALIDTNLTAMKGALLITTCIQGMD 165
++ ++ + + + ++ + + L T + MD
Sbjct: 241 NILNTIENFQLRIENSIVLPFGDSTLDITVLAQMD 275
>AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:362230-363639 REVERSE
LENGTH=423
Length = 423
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 39/49 (79%)
Query: 17 NLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
++E E++RREKL+ R LR++VP V+ M+KA+++ DA++YI+ L+ ++
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKI 298
>AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:6182067-6186261
FORWARD LENGTH=518
Length = 518
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 21 ERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
ER+RREKL+ + + LRS+VP VT M+K +I+ D I Y+ L+ +V
Sbjct: 368 ERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRV 412
>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:23599809-23602734
FORWARD LENGTH=596
Length = 596
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 36/45 (80%)
Query: 21 ERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
E+KRREKL+ R + LRS++P ++ ++K +I+DD I Y+++LQ +V
Sbjct: 410 EKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRV 454
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 36/45 (80%)
Query: 21 ERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
E+KRREKL+ R + LRS++P ++ ++K +I+DD I Y+++LQ +V
Sbjct: 410 EKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRV 454
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 36/45 (80%)
Query: 21 ERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
E+KRREKL+ R + LRS++P ++ ++K +I+DD I Y+++LQ +V
Sbjct: 410 EKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRV 454
>AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 |
chr5:19002719-19004254 FORWARD LENGTH=511
Length = 511
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 17 NLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
++E ER RREKL+ R LR++VP V+ M+K ++++DA+ YI EL+ +
Sbjct: 344 HVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKA 392
>AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:16529457-16532866
FORWARD LENGTH=637
Length = 637
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 34/45 (75%)
Query: 21 ERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
E+KRREKL+ R + LR ++P + ++K +I+DD I Y++EL+ +V
Sbjct: 446 EKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRV 490
>AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=305
Length = 305
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 21 ERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQVXXXXXXXXXXXXXXS 80
ERKRREKL+ R + L +L+P + M+KA+++ DAI +IK LQ+ V
Sbjct: 131 ERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKTMESV 190
Query: 81 KEVAK----------PKINDFDLAEEMKKWGIQEEVHVTKIDGNKLWVKMIIENKRGSFK 130
V K P + E+ V ++ G + +K++ E ++G+
Sbjct: 191 VLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEV-RVSGKDVLIKILCEKQKGNVI 249
Query: 131 KLVEFLDTYGIALIDTNLTAMKGALLITTCIQGMDGQTLEVEQI 174
K++ ++ G+++ ++N+ I+ Q + +++E +
Sbjct: 250 KIMGEIEKLGLSITNSNVLPFGPTFDISIIAQKNNNFDMKIEDV 293
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17796362-17797647 REVERSE
LENGTH=328
Length = 328
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 35/45 (77%)
Query: 21 ERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
ERKRREKL+ R + L +LVP + M+KA+++ DA+ +IK LQ++V
Sbjct: 157 ERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERV 201
>AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=304
Length = 304
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 21 ERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
ERKRREKL+ R + L +L+P + M+KA+++ DAI +IK LQ+ V
Sbjct: 131 ERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESV 175
>AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:9684858-9686321
FORWARD LENGTH=320
Length = 320
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 37/45 (82%)
Query: 21 ERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
ERKRR+KL+ RL+ L +L+P + +KAT+++DAI ++K+LQ++V
Sbjct: 137 ERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERV 181
>AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238904 FORWARD LENGTH=351
Length = 351
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 41/52 (78%)
Query: 14 KSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
SKNL ER+RR++L+ RL MLRS+VP ++ M++ +I+ DAI Y+KEL D++
Sbjct: 176 PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKI 227
>AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238635 FORWARD LENGTH=290
Length = 290
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 41/52 (78%)
Query: 14 KSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
SKNL ER+RR++L+ RL MLRS+VP ++ M++ +I+ DAI Y+KEL D++
Sbjct: 176 PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKI 227
>AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:3341357-3342877 FORWARD
LENGTH=315
Length = 315
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 41/52 (78%)
Query: 14 KSKNLEYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
SKNL ER+RR++L+ RL +LRS+VP +T M++ +I+ DAI Y+KEL D++
Sbjct: 149 PSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKI 200
>AT5G43175.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:17334261-17335234 FORWARD
LENGTH=223
Length = 223
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 20 YERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
Y RKRRE+++ RL L+SLVP T ++ +T+++DA+ Y+K LQ Q+
Sbjct: 146 YARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQI 191
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 35/47 (74%)
Query: 19 EYERKRREKLSTRLLMLRSLVPIVTNMNKATIIDDAITYIKELQDQV 65
+ ERKRR+K++ R+ L+ LVP + +KA+++D+ I Y+K+LQ QV
Sbjct: 220 QSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266