Miyakogusa Predicted Gene
- Lj2g3v1277880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1277880.1 tr|G7KF80|G7KF80_MEDTR E3 ubiquitin-protein
ligase MARCH3 OS=Medicago truncatula GN=MTR_5g040650
PE=,85.62,0,DUF3675,Protein of unknown function DUF3675; RINGv,Zinc
finger, RING-CH-type; RING/U-box,NULL; seg,N,CUFF.36691.1
(289 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G02960.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 259 2e-69
AT2G02960.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 259 2e-69
AT2G02960.4 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 259 2e-69
AT2G02960.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 259 2e-69
AT3G47550.6 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 254 4e-68
AT3G47550.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 254 4e-68
AT3G47550.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 238 3e-63
AT5G62460.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 231 4e-61
AT1G14260.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 220 1e-57
AT1G14260.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 220 1e-57
AT2G02960.5 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 209 3e-54
AT3G47550.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 194 8e-50
AT2G01275.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 142 4e-34
AT2G01275.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 142 4e-34
AT5G38070.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 123 1e-28
AT4G02075.1 | Symbols: PIT1 | RING/FYVE/PHD zinc finger superfam... 109 2e-24
AT1G02610.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 99 3e-21
AT4G32670.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 59 3e-09
AT4G34100.2 | Symbols: | RING/U-box superfamily protein | chr4:... 58 6e-09
AT4G34100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 58 6e-09
AT3G06330.2 | Symbols: | RING/U-box superfamily protein | chr3:... 50 1e-06
AT5G03180.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 3e-06
AT5G03180.2 | Symbols: | RING/U-box superfamily protein | chr5:... 49 3e-06
AT3G06330.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 3e-06
AT2G45530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 5e-06
AT2G37950.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 49 6e-06
AT5G60580.4 | Symbols: | RING/U-box superfamily protein | chr5:... 48 6e-06
AT5G60580.3 | Symbols: | RING/U-box superfamily protein | chr5:... 48 6e-06
AT5G60580.2 | Symbols: | RING/U-box superfamily protein | chr5:... 48 6e-06
AT5G60580.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 6e-06
AT3G06330.3 | Symbols: | RING/U-box superfamily protein | chr3:... 48 7e-06
>AT2G02960.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:862346-863980 REVERSE LENGTH=271
Length = 271
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 153/217 (70%), Gaps = 4/217 (1%)
Query: 64 LIQMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGY 123
LI ECRIC +E V NLE+PCACSGSLKYAHRKCVQ WCNEKG+I CEICHQPYQPGY
Sbjct: 37 LIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGY 96
Query: 124 TAPPPRPNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGA 183
TAPPP P+ETTIDIGGGWTISG LD+ DPRLLAIAEAER++L++EY EY AS+ASGA
Sbjct: 97 TAPPPPLQPEETTIDIGGGWTISG--LDVHDPRLLAIAEAERRYLESEYVEYTASSASGA 154
Query: 184 AFCRSXXXXXXXXXXXXXXXSV-TDGDASDDDPSNFFSLFLLRAAGFLLPCYIMAWAISI 242
AFCRS ++ D D +DDPS+ SL LLRAAGFLLPCYIMAWAISI
Sbjct: 155 AFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISI 214
Query: 243 LXXXXXXXXXXXXXXXXXXFVLQSGQRRGLQFAIATG 279
L VLQSGQ R + F ++ G
Sbjct: 215 L-QRRRQRQEAAALATQFALVLQSGQPRTVHFTVSPG 250
>AT2G02960.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:862346-863980 REVERSE LENGTH=271
Length = 271
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 153/217 (70%), Gaps = 4/217 (1%)
Query: 64 LIQMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGY 123
LI ECRIC +E V NLE+PCACSGSLKYAHRKCVQ WCNEKG+I CEICHQPYQPGY
Sbjct: 37 LIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGY 96
Query: 124 TAPPPRPNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGA 183
TAPPP P+ETTIDIGGGWTISG LD+ DPRLLAIAEAER++L++EY EY AS+ASGA
Sbjct: 97 TAPPPPLQPEETTIDIGGGWTISG--LDVHDPRLLAIAEAERRYLESEYVEYTASSASGA 154
Query: 184 AFCRSXXXXXXXXXXXXXXXSV-TDGDASDDDPSNFFSLFLLRAAGFLLPCYIMAWAISI 242
AFCRS ++ D D +DDPS+ SL LLRAAGFLLPCYIMAWAISI
Sbjct: 155 AFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISI 214
Query: 243 LXXXXXXXXXXXXXXXXXXFVLQSGQRRGLQFAIATG 279
L VLQSGQ R + F ++ G
Sbjct: 215 L-QRRRQRQEAAALATQFALVLQSGQPRTVHFTVSPG 250
>AT2G02960.4 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:862346-863980 REVERSE LENGTH=271
Length = 271
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 153/217 (70%), Gaps = 4/217 (1%)
Query: 64 LIQMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGY 123
LI ECRIC +E V NLE+PCACSGSLKYAHRKCVQ WCNEKG+I CEICHQPYQPGY
Sbjct: 37 LIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGY 96
Query: 124 TAPPPRPNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGA 183
TAPPP P+ETTIDIGGGWTISG LD+ DPRLLAIAEAER++L++EY EY AS+ASGA
Sbjct: 97 TAPPPPLQPEETTIDIGGGWTISG--LDVHDPRLLAIAEAERRYLESEYVEYTASSASGA 154
Query: 184 AFCRSXXXXXXXXXXXXXXXSV-TDGDASDDDPSNFFSLFLLRAAGFLLPCYIMAWAISI 242
AFCRS ++ D D +DDPS+ SL LLRAAGFLLPCYIMAWAISI
Sbjct: 155 AFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISI 214
Query: 243 LXXXXXXXXXXXXXXXXXXFVLQSGQRRGLQFAIATG 279
L VLQSGQ R + F ++ G
Sbjct: 215 L-QRRRQRQEAAALATQFALVLQSGQPRTVHFTVSPG 250
>AT2G02960.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:862346-863980 REVERSE LENGTH=271
Length = 271
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 153/217 (70%), Gaps = 4/217 (1%)
Query: 64 LIQMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGY 123
LI ECRIC +E V NLE+PCACSGSLKYAHRKCVQ WCNEKG+I CEICHQPYQPGY
Sbjct: 37 LIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGY 96
Query: 124 TAPPPRPNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGA 183
TAPPP P+ETTIDIGGGWTISG LD+ DPRLLAIAEAER++L++EY EY AS+ASGA
Sbjct: 97 TAPPPPLQPEETTIDIGGGWTISG--LDVHDPRLLAIAEAERRYLESEYVEYTASSASGA 154
Query: 184 AFCRSXXXXXXXXXXXXXXXSV-TDGDASDDDPSNFFSLFLLRAAGFLLPCYIMAWAISI 242
AFCRS ++ D D +DDPS+ SL LLRAAGFLLPCYIMAWAISI
Sbjct: 155 AFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISI 214
Query: 243 LXXXXXXXXXXXXXXXXXXFVLQSGQRRGLQFAIATG 279
L VLQSGQ R + F ++ G
Sbjct: 215 L-QRRRQRQEAAALATQFALVLQSGQPRTVHFTVSPG 250
>AT3G47550.6 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:17523841-17525278 FORWARD LENGTH=288
Length = 288
Score = 254 bits (650), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 134/220 (60%), Positives = 151/220 (68%), Gaps = 4/220 (1%)
Query: 64 LIQMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGY 123
L+Q ECRICQEED NLE PCAC+GSLKYAHRKCVQ WCNEKGDITCEICHQPYQ GY
Sbjct: 63 LLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQHGY 122
Query: 124 TAPPPRPNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGA 183
TA PP P PDET I IG W +G PLDL DPR+LA+A AER FL+A+YDEY+ +N+SGA
Sbjct: 123 TA-PPPPPPDETIIHIGDDWE-NGVPLDLTDPRILAMAAAERHFLEADYDEYSENNSSGA 180
Query: 184 AFCRSXXXXXXXXXXXXXXXSVTDGDASDDDPSNFFSLFLLRAAGFLLPCYIMAWAISIL 243
AFCRS ++T +DDP+ FFSLFLLRAAGFLLPCYIMAWAI IL
Sbjct: 181 AFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAIGIL 240
Query: 244 XXXXXXXXXXXXXXXXXXFVLQSG--QRRGLQFAIATGPP 281
F++ G QRRGL FA+A PP
Sbjct: 241 QRRRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVAPQPP 280
>AT3G47550.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:17523841-17525278 FORWARD LENGTH=288
Length = 288
Score = 254 bits (650), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 134/220 (60%), Positives = 151/220 (68%), Gaps = 4/220 (1%)
Query: 64 LIQMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGY 123
L+Q ECRICQEED NLE PCAC+GSLKYAHRKCVQ WCNEKGDITCEICHQPYQ GY
Sbjct: 63 LLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQHGY 122
Query: 124 TAPPPRPNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGA 183
TA PP P PDET I IG W +G PLDL DPR+LA+A AER FL+A+YDEY+ +N+SGA
Sbjct: 123 TA-PPPPPPDETIIHIGDDWE-NGVPLDLTDPRILAMAAAERHFLEADYDEYSENNSSGA 180
Query: 184 AFCRSXXXXXXXXXXXXXXXSVTDGDASDDDPSNFFSLFLLRAAGFLLPCYIMAWAISIL 243
AFCRS ++T +DDP+ FFSLFLLRAAGFLLPCYIMAWAI IL
Sbjct: 181 AFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAIGIL 240
Query: 244 XXXXXXXXXXXXXXXXXXFVLQSG--QRRGLQFAIATGPP 281
F++ G QRRGL FA+A PP
Sbjct: 241 QRRRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVAPQPP 280
>AT3G47550.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:17523841-17525168 FORWARD LENGTH=249
Length = 249
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/180 (67%), Positives = 136/180 (75%), Gaps = 2/180 (1%)
Query: 64 LIQMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGY 123
L+Q ECRICQEED NLE PCAC+GSLKYAHRKCVQ WCNEKGDITCEICHQPYQ GY
Sbjct: 63 LLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQHGY 122
Query: 124 TAPPPRPNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGA 183
TA PP P PDET I IG W +G PLDL DPR+LA+A AER FL+A+YDEY+ +N+SGA
Sbjct: 123 TA-PPPPPPDETIIHIGDDWE-NGVPLDLTDPRILAMAAAERHFLEADYDEYSENNSSGA 180
Query: 184 AFCRSXXXXXXXXXXXXXXXSVTDGDASDDDPSNFFSLFLLRAAGFLLPCYIMAWAISIL 243
AFCRS ++T +DDP+ FFSLFLLRAAGFLLPCYIMAWAI IL
Sbjct: 181 AFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAIGIL 240
>AT5G62460.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:25075545-25077072 FORWARD LENGTH=307
Length = 307
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/182 (67%), Positives = 138/182 (75%), Gaps = 4/182 (2%)
Query: 64 LIQMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGY 123
LIQ ECRICQEED V NLE+PC+CSGSLKYAHRKCVQ WCNEKGD TCEICH+ YQPGY
Sbjct: 72 LIQSVECRICQEEDSVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTCEICHKSYQPGY 131
Query: 124 TAPPPRPNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGA 183
TAPPP P +T IDIG W +G LDL DPR+LA+A AER F DA+YDEYA SN+SGA
Sbjct: 132 TAPPPPPAD-DTIIDIGEDWG-NGVHLDLNDPRILAMAAAERHFFDADYDEYADSNSSGA 189
Query: 184 AFCRSXXXXXXXXXXXXXXXSVTDGDASD--DDPSNFFSLFLLRAAGFLLPCYIMAWAIS 241
AFCRS ++T+ ++ D DDPS FF LF+LRAAGFLLPCYIMAWAIS
Sbjct: 190 AFCRSAALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAAGFLLPCYIMAWAIS 249
Query: 242 IL 243
IL
Sbjct: 250 IL 251
>AT1G14260.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:4873200-4874430 FORWARD LENGTH=265
Length = 265
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/181 (67%), Positives = 137/181 (75%), Gaps = 3/181 (1%)
Query: 64 LIQMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGY 123
LI AECRICQ+E + NLE+PCAC+GSLKYAHRKCVQ WCNEKG+ CEICHQPYQ GY
Sbjct: 51 LISSAECRICQDECDIKNLESPCACNGSLKYAHRKCVQRWCNEKGNTICEICHQPYQAGY 110
Query: 124 TAPPPRPNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGA 183
T+PPP P +ETTIDIGGGW ISG LDL DPRLLAIAEAERQ L++EYD+Y AS+ SGA
Sbjct: 111 TSPPPPPQSEETTIDIGGGWRISG--LDLDDPRLLAIAEAERQILESEYDDYTASDTSGA 168
Query: 184 AFCRSXXXXXXXXXXXXXXXSV-TDGDASDDDPSNFFSLFLLRAAGFLLPCYIMAWAISI 242
AF RS ++ D+ DDDPS+ SLFLLRAA FLLPCYIMA AISI
Sbjct: 169 AFFRSAALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASAISI 228
Query: 243 L 243
L
Sbjct: 229 L 229
>AT1G14260.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:4873200-4874430 FORWARD LENGTH=265
Length = 265
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/181 (67%), Positives = 137/181 (75%), Gaps = 3/181 (1%)
Query: 64 LIQMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGY 123
LI AECRICQ+E + NLE+PCAC+GSLKYAHRKCVQ WCNEKG+ CEICHQPYQ GY
Sbjct: 51 LISSAECRICQDECDIKNLESPCACNGSLKYAHRKCVQRWCNEKGNTICEICHQPYQAGY 110
Query: 124 TAPPPRPNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGA 183
T+PPP P +ETTIDIGGGW ISG LDL DPRLLAIAEAERQ L++EYD+Y AS+ SGA
Sbjct: 111 TSPPPPPQSEETTIDIGGGWRISG--LDLDDPRLLAIAEAERQILESEYDDYTASDTSGA 168
Query: 184 AFCRSXXXXXXXXXXXXXXXSV-TDGDASDDDPSNFFSLFLLRAAGFLLPCYIMAWAISI 242
AF RS ++ D+ DDDPS+ SLFLLRAA FLLPCYIMA AISI
Sbjct: 169 AFFRSAALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASAISI 228
Query: 243 L 243
L
Sbjct: 229 L 229
>AT2G02960.5 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:862440-863980 REVERSE LENGTH=275
Length = 275
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/125 (78%), Positives = 108/125 (86%), Gaps = 2/125 (1%)
Query: 64 LIQMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGY 123
LI ECRIC +E V NLE+PCACSGSLKYAHRKCVQ WCNEKG+I CEICHQPYQPGY
Sbjct: 37 LIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGY 96
Query: 124 TAPPPRPNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGA 183
TAPPP P+ETTIDIGGGWTISG LD+ DPRLLAIAEAER++L++EY EY AS+ASGA
Sbjct: 97 TAPPPPLQPEETTIDIGGGWTISG--LDVHDPRLLAIAEAERRYLESEYVEYTASSASGA 154
Query: 184 AFCRS 188
AFCRS
Sbjct: 155 AFCRS 159
>AT3G47550.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:17523841-17524942 FORWARD LENGTH=232
Length = 232
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 115/158 (72%), Gaps = 2/158 (1%)
Query: 64 LIQMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGY 123
L+Q ECRICQEED NLE PCAC+GSLKYAHRKCVQ WCNEKGDITCEICHQPYQ GY
Sbjct: 63 LLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQHGY 122
Query: 124 TAPPPRPNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGA 183
TA PP P PDET I IG W +G PLDL DPR+LA+A AER FL+A+YDEY+ +N+SGA
Sbjct: 123 TA-PPPPPPDETIIHIGDDWE-NGVPLDLTDPRILAMAAAERHFLEADYDEYSENNSSGA 180
Query: 184 AFCRSXXXXXXXXXXXXXXXSVTDGDASDDDPSNFFSL 221
AFCRS ++T +DDP+ FFS+
Sbjct: 181 AFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSV 218
>AT2G01275.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:142610-143809 REVERSE LENGTH=259
Length = 259
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 96/177 (54%), Gaps = 9/177 (5%)
Query: 65 IQMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGYT 124
+ MAECRIC +ED SN+ETPC+CSGS+KYAHR+CVQ WCNEKGD TCEICHQ ++P YT
Sbjct: 54 LSMAECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYT 113
Query: 125 APPPRPNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGAA 184
APPP + G W IS R+ R + + A+ F+D Y S+ +
Sbjct: 114 APPPLLELGHVPLHFRGNWGISQ-----REHRFITVVPADSTFID---QPYPLSSTTSFI 165
Query: 185 FCRSXXXXXXXXXXXXXXXSVTDGDASDDDPSNFFSLFLLRAAGFLLPCYIMAWAIS 241
CRS + S+ F+L LR G +LP Y++ A++
Sbjct: 166 CCRSLVLIFMALLILRHTLPLV-LTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVA 221
>AT2G01275.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:142610-143809 REVERSE LENGTH=259
Length = 259
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 96/177 (54%), Gaps = 9/177 (5%)
Query: 65 IQMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGYT 124
+ MAECRIC +ED SN+ETPC+CSGS+KYAHR+CVQ WCNEKGD TCEICHQ ++P YT
Sbjct: 54 LSMAECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYT 113
Query: 125 APPPRPNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGAA 184
APPP + G W IS R+ R + + A+ F+D Y S+ +
Sbjct: 114 APPPLLELGHVPLHFRGNWGISQ-----REHRFITVVPADSTFID---QPYPLSSTTSFI 165
Query: 185 FCRSXXXXXXXXXXXXXXXSVTDGDASDDDPSNFFSLFLLRAAGFLLPCYIMAWAIS 241
CRS + S+ F+L LR G +LP Y++ A++
Sbjct: 166 CCRSLVLIFMALLILRHTLPLV-LTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVA 221
>AT5G38070.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:15190254-15191588 FORWARD LENGTH=259
Length = 259
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 93/178 (52%), Gaps = 8/178 (4%)
Query: 66 QMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGYTA 125
+ +CRIC +ED+ +N++TPC+CSG+LK+AH CVQ WCNEKGD CEIC Q Y+PGYTA
Sbjct: 50 KFVQCRICHDEDEDTNMDTPCSCSGTLKFAHHNCVQRWCNEKGDTVCEICRQQYKPGYTA 109
Query: 126 PPPRPNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGAAF 185
P + +++ G W I G LDLR+P L +A D ++D Y+ + +
Sbjct: 110 PRQLFHYTGISMNFGSDWGIEG--LDLRNPYFLTWGDA-----DDDHDLYSFHSPTSLIC 162
Query: 186 CRSXXXXXXXXXXXXXXXSVTDGDASDDDPSNFFSLFLLRAAGFLLPCYIMAWAISIL 243
CR V G DD L L+R G LL Y+ + ++
Sbjct: 163 CRLIALLFVLLLFLRHSLPVLLG-GVDDFSITLLMLPLVRTLGILLIAYVFFKSFIVI 219
>AT4G02075.1 | Symbols: PIT1 | RING/FYVE/PHD zinc finger superfamily
protein | chr4:913555-916414 REVERSE LENGTH=218
Length = 218
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 95/181 (52%), Gaps = 18/181 (9%)
Query: 65 IQMAECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGYT 124
+++ CRIC EE++ S E PCACSG++K+AHR C+Q WCNEKG+ TCEIC Q Y+ GYT
Sbjct: 15 VRITRCRICHEEEEESFFEVPCACSGTVKFAHRNCIQRWCNEKGNTTCEICLQVYKDGYT 74
Query: 125 APPPRPN--PDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASG 182
A + E TI + G L++IAE++ ++ D G
Sbjct: 75 AVLKQSKLIEQEVTIRVNGRRRRRSRR-------LVSIAESDISQCNSVADR-------G 120
Query: 183 AAFCRSXXXXXXXXXXXXXXXSVTDGDASDDDPSNFFSLFLLRAAGFLLPCYIMAWAISI 242
A+FCRS V G +++ P + F++ L+A G LLP +I+ IS
Sbjct: 121 ASFCRSLTFTLSVFLLMKHTFDVIYG--TEEYPFSVFTVLTLKAIGILLPMFIIIRTIST 178
Query: 243 L 243
+
Sbjct: 179 I 179
>AT1G02610.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:553181-555854 REVERSE LENGTH=221
Length = 221
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 70 CRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGYTAPPPR 129
CRIC EE+ S E PC+CSG++K+AHR C+Q WC+EKG+ CEIC Q Y+PGYT
Sbjct: 20 CRICHEEEAESYFEAPCSCSGTIKFAHRDCIQRWCDEKGNTICEICLQEYKPGYTTTSKP 79
Query: 130 PNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGAAFCRSX 189
ET + I I R + E +++ E + GA+ CR
Sbjct: 80 SRFIETAVTIRDNLHIMRRENGRRRRNRRLVNREE-----SDFQECNSGVDRGASCCRYL 134
Query: 190 XXXXXXXXXXXXXXSVTDGDASDDDPSNFFSLFLLRAAGFLLPCYIMAWAIS 241
G +++ P F++ L+A G LLP ++ I+
Sbjct: 135 ALIFSVILLIKHAFDAVYG--TEEYPYTIFTVLTLKAIGILLPMLVIIRTIT 184
>AT4G32670.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr4:15759527-15762847 REVERSE LENGTH=860
Length = 860
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 70 CRICQEEDQVSN-LETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQ--PGYTAP 126
CRICQ ++ N L PCAC GSLKY H C+ W N + CEIC + Y P Y+
Sbjct: 33 CRICQSPEEPDNPLRHPCACRGSLKYIHSDCLFLWLNRRKRNHCEICKRSYSIVPVYSEN 92
Query: 127 PPRPNP 132
P P
Sbjct: 93 APERLP 98
>AT4G34100.2 | Symbols: | RING/U-box superfamily protein |
chr4:16330590-16334864 FORWARD LENGTH=1107
Length = 1107
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 70 CRICQEEDQVSN-LETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQP--YQPGYTAP 126
CRIC+ N L PCACSGS+K+ H+ C+ W N CE+C P + P Y
Sbjct: 68 CRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYADN 127
Query: 127 PPRPNP 132
P P
Sbjct: 128 APSRLP 133
>AT4G34100.1 | Symbols: | RING/U-box superfamily protein |
chr4:16330590-16334864 FORWARD LENGTH=1108
Length = 1108
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 70 CRICQEEDQVSN-LETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQP--YQPGYTAP 126
CRIC+ N L PCACSGS+K+ H+ C+ W N CE+C P + P Y
Sbjct: 68 CRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYADN 127
Query: 127 PPRPNP 132
P P
Sbjct: 128 APSRLP 133
>AT3G06330.2 | Symbols: | RING/U-box superfamily protein |
chr3:1918512-1919709 FORWARD LENGTH=257
Length = 257
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 68 AECRICQEE-DQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQ--PGYT 124
A CRIC + ++ + L+ C+C G L+ H C W + KG TC++C Q Q P
Sbjct: 47 AVCRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVVQNLPVTL 106
Query: 125 APPPRPN 131
P PN
Sbjct: 107 VRVPTPN 113
>AT5G03180.1 | Symbols: | RING/U-box superfamily protein |
chr5:754201-756411 REVERSE LENGTH=462
Length = 462
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 68 AECRICQ---EEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQ 117
A CRIC EED+ + + C C G L AH+ C W KG+ITC++C Q
Sbjct: 245 AVCRICMVEMEEDEEA-FKMECMCKGELALAHKTCTIKWFTIKGNITCDVCKQ 296
>AT5G03180.2 | Symbols: | RING/U-box superfamily protein |
chr5:754201-756411 REVERSE LENGTH=466
Length = 466
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 68 AECRICQ---EEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQ 117
A CRIC EED+ + + C C G L AH+ C W KG+ITC++C Q
Sbjct: 249 AVCRICMVEMEEDEEA-FKMECMCKGELALAHKTCTIKWFTIKGNITCDVCKQ 300
>AT3G06330.1 | Symbols: | RING/U-box superfamily protein |
chr3:1917334-1919709 FORWARD LENGTH=426
Length = 426
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 68 AECRICQEE-DQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQ--PGYT 124
A CRIC + ++ + L+ C+C G L+ H C W + KG TC++C Q Q P
Sbjct: 216 AVCRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVVQNLPVTL 275
Query: 125 APPPRPN 131
P PN
Sbjct: 276 VRVPTPN 282
>AT2G45530.1 | Symbols: | RING/U-box superfamily protein |
chr2:18756604-18757326 FORWARD LENGTH=240
Length = 240
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 69 ECRICQEEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGYTAPPP 128
+CR+C ++ + +E C C G L AHR C+ W KG CEIC Q T P
Sbjct: 73 QCRVCLQDKEEVLIELGCQCRGGLAKAHRSCIDAWFRTKGSNQCEIC-QVVAVNVTPPET 131
Query: 129 RPNPD 133
+P +
Sbjct: 132 QPTTN 136
>AT2G37950.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:15882536-15883665 REVERSE LENGTH=207
Length = 207
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 69 ECRICQ---EEDQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQP---- 121
+CRIC E +E C+C L AHR+C + W KGD TCEIC +
Sbjct: 83 DCRICHLGVETSGGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVARNVGGA 142
Query: 122 ----GYTAPPPR-PNPDETTIDIGGGWTI 145
G T N +ET GGG T+
Sbjct: 143 NEMVGSTMEERELRNGEETAAGEGGGATV 171
>AT5G60580.4 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=494
Length = 494
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 68 AECRICQEE--DQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQ 117
A CRIC E + L+ C+C G L AH+ C W KG+ TCE+C Q
Sbjct: 255 AVCRICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQ 306
>AT5G60580.3 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=487
Length = 487
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 68 AECRICQEE--DQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQ 117
A CRIC E + L+ C+C G L AH+ C W KG+ TCE+C Q
Sbjct: 255 AVCRICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQ 306
>AT5G60580.2 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=494
Length = 494
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 68 AECRICQEE--DQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQ 117
A CRIC E + L+ C+C G L AH+ C W KG+ TCE+C Q
Sbjct: 255 AVCRICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQ 306
>AT5G60580.1 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=487
Length = 487
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 68 AECRICQEE--DQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQ 117
A CRIC E + L+ C+C G L AH+ C W KG+ TCE+C Q
Sbjct: 255 AVCRICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQ 306
>AT3G06330.3 | Symbols: | RING/U-box superfamily protein |
chr3:1917334-1919330 FORWARD LENGTH=363
Length = 363
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 68 AECRICQEE-DQVSNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQ--PGYT 124
A CRIC + ++ + L+ C+C G L+ H C W + KG TC++C Q Q P
Sbjct: 216 AVCRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVVQNLPVTL 275
Query: 125 APPPRPN 131
P PN
Sbjct: 276 VRVPTPN 282