Miyakogusa Predicted Gene

Lj2g3v1277800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1277800.1 Non Chatacterized Hit- tr|I3SNB3|I3SNB3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.67,0,Ribonuclease_T2,Ribonuclease T2-like; no
description,Ribonuclease T2-like; RNASE_T2_1,Ribonuclease
T,CUFF.36669.1
         (226 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G14220.1 | Symbols:  | Ribonuclease T2 family protein | chr1:...   333   5e-92
AT1G26820.1 | Symbols: RNS3 | ribonuclease 3 | chr1:9292760-9293...   326   6e-90
AT2G02990.1 | Symbols: RNS1, ATRNS1 | ribonuclease 1 | chr2:8737...   303   4e-83
AT1G14210.1 | Symbols:  | Ribonuclease T2 family protein | chr1:...   236   1e-62
AT2G39780.1 | Symbols: RNS2 | ribonuclease 2 | chr2:16591256-165...   129   2e-30
AT2G39780.2 | Symbols: RNS2 | ribonuclease 2 | chr2:16591256-165...    93   2e-19

>AT1G14220.1 | Symbols:  | Ribonuclease T2 family protein |
           chr1:4858642-4859601 REVERSE LENGTH=228
          Length = 228

 Score =  333 bits (854), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 151/225 (67%), Positives = 184/225 (81%)

Query: 2   KLSISFLAKLLILQYLSVQCLSDDFDFFYFVQQWPGAYCDSKQSCCYPKTGKPTADFGIH 61
           K  ++ L KLL+ Q L V    +DFDFFYFV QWPGAYCD+ ++CCYP +GKP ADFGIH
Sbjct: 4   KGCVNVLLKLLVFQGLFVSRPQEDFDFFYFVLQWPGAYCDTSRACCYPTSGKPAADFGIH 63

Query: 62  GLWPNYNDGSWPSNCDPDSTFDKSEISELISSMEKSWPSLSCPSSNGIRFWSHEWEKHGT 121
           GLWPNYN GSWPSNCDPDS FD+S+IS+L+SS++K+WP+LSCPS+ G  FW HEWEKHGT
Sbjct: 64  GLWPNYNGGSWPSNCDPDSQFDRSQISDLVSSLKKNWPTLSCPSNEGFNFWEHEWEKHGT 123

Query: 122 CAESELGQREYFEAALKLKEKVNLLQILKNAEIQPDDEFYSIESIKDAIKEGSGFTPGIE 181
           C+ES + Q EYFE ALKLK+K NLLQILKN+ I PDD FY+++ I +AIK+G GFTPGIE
Sbjct: 124 CSESVMDQHEYFENALKLKQKANLLQILKNSGINPDDGFYNLDKITNAIKDGIGFTPGIE 183

Query: 182 CNRDSRGNSQLYQVYMCVDTSGSDFIECPVSPRSKCGSDIQFPKF 226
           CN+D   N+QL+Q+Y+CVDTSG++FIECPV PR  C S IQF KF
Sbjct: 184 CNKDPERNAQLHQIYICVDTSGTEFIECPVLPRGSCPSQIQFSKF 228


>AT1G26820.1 | Symbols: RNS3 | ribonuclease 3 | chr1:9292760-9293722
           REVERSE LENGTH=222
          Length = 222

 Score =  326 bits (836), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 143/222 (64%), Positives = 175/222 (78%)

Query: 5   ISFLAKLLILQYLSVQCLSDDFDFFYFVQQWPGAYCDSKQSCCYPKTGKPTADFGIHGLW 64
           + F   +L LQ L VQ  + DFDFFYFV QWPGAYCDS+ SCCYP+TGKP ADFGIHGLW
Sbjct: 1   MKFFIFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLW 60

Query: 65  PNYNDGSWPSNCDPDSTFDKSEISELISSMEKSWPSLSCPSSNGIRFWSHEWEKHGTCAE 124
           PNY  G WP NC+PDS FD   +S+L+S +++ WP+LSCPS++G++FW+HEWEKHGTCAE
Sbjct: 61  PNYKTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAE 120

Query: 125 SELGQREYFEAALKLKEKVNLLQILKNAEIQPDDEFYSIESIKDAIKEGSGFTPGIECNR 184
           SEL Q +YFEA LKLK+K NLL  L NA I+PDD+FY ++ I++ IK+  GF PGIECN+
Sbjct: 121 SELDQHDYFEAGLKLKQKANLLHALTNAGIKPDDKFYEMKDIENTIKQVVGFAPGIECNK 180

Query: 185 DSRGNSQLYQVYMCVDTSGSDFIECPVSPRSKCGSDIQFPKF 226
           DS  NSQLYQ+Y+CVDTS S FI CPV P  +C S +QFPKF
Sbjct: 181 DSSHNSQLYQIYLCVDTSASKFINCPVMPHGRCDSRVQFPKF 222


>AT2G02990.1 | Symbols: RNS1, ATRNS1 | ribonuclease 1 |
           chr2:873714-874667 FORWARD LENGTH=230
          Length = 230

 Score =  303 bits (777), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 141/224 (62%), Positives = 173/224 (77%), Gaps = 1/224 (0%)

Query: 4   SISFLAKLLIL-QYLSVQCLSDDFDFFYFVQQWPGAYCDSKQSCCYPKTGKPTADFGIHG 62
           S+  ++ L+IL    S    S+DFDFFYFVQQWPG+YCD+++ CCYP +GKP ADFGIHG
Sbjct: 7   SLCLISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHG 66

Query: 63  LWPNYNDGSWPSNCDPDSTFDKSEISELISSMEKSWPSLSCPSSNGIRFWSHEWEKHGTC 122
           LWPNY DG++PSNCD    FD S IS+L++SM+KSWP+L+CPS +G  FW HEWEKHGTC
Sbjct: 67  LWPNYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTC 126

Query: 123 AESELGQREYFEAALKLKEKVNLLQILKNAEIQPDDEFYSIESIKDAIKEGSGFTPGIEC 182
           +ES + Q EYF+ AL LK+K NLL  L  A I PD + YS+ESI+D+IKE  GFTP +EC
Sbjct: 127 SESVIDQHEYFQTALNLKQKTNLLGALTKAGINPDGKSYSLESIRDSIKESIGFTPWVEC 186

Query: 183 NRDSRGNSQLYQVYMCVDTSGSDFIECPVSPRSKCGSDIQFPKF 226
           NRD  GNSQLYQVY+CVD SGS  IECPV P  KCG++I+FP F
Sbjct: 187 NRDGSGNSQLYQVYLCVDRSGSGLIECPVFPHGKCGAEIEFPSF 230


>AT1G14210.1 | Symbols:  | Ribonuclease T2 family protein |
           chr1:4856902-4857941 REVERSE LENGTH=247
          Length = 247

 Score =  236 bits (602), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 112/225 (49%), Positives = 142/225 (63%), Gaps = 6/225 (2%)

Query: 7   FLAKLLILQYLSVQC--LSDDFDFFYFVQQWPGAYCDSKQSCCYPKTGKPTADFGIHGLW 64
            +  LLILQ L V       DF+FFY+V  WPGA CDS++ CC P  G   +DF IHGLW
Sbjct: 5   IIVSLLILQSLVVSSSQTEPDFNFFYWVNYWPGAICDSQKGCCPPTKGNTASDFIIHGLW 64

Query: 65  PNYNDGSWPSNCDPDSTFDKSEISELISSMEKSWPSL---SCPSSNGIRFWSHEWEKHGT 121
           P +N+G+WP+ CD  + FD S+IS+L+  MEK W      +CPS N    W HEW KHGT
Sbjct: 65  PQFNNGTWPAFCDQTNLFDISKISDLVCQMEKKWTEWGVWACPS-NETNLWEHEWNKHGT 123

Query: 122 CAESELGQREYFEAALKLKEKVNLLQILKNAEIQPDDEFYSIESIKDAIKEGSGFTPGIE 181
           C +S   Q  YF   LK K KV+LL IL    I+P+D FYS++ IK+AIK   GF PGIE
Sbjct: 124 CVQSIFDQHSYFRTNLKFKHKVHLLNILIQKGIKPNDGFYSLDEIKNAIKCAIGFAPGIE 183

Query: 182 CNRDSRGNSQLYQVYMCVDTSGSDFIECPVSPRSKCGSDIQFPKF 226
           CN D +GN QL+Q+Y+C+D    +F+ECP  P   C S I+FP  
Sbjct: 184 CNEDVKGNKQLFQIYICLDNYAKEFVECPYVPDKSCASKIKFPSL 228


>AT2G39780.1 | Symbols: RNS2 | ribonuclease 2 |
           chr2:16591256-16593515 FORWARD LENGTH=259
          Length = 259

 Score =  129 bits (324), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 111/215 (51%), Gaps = 18/215 (8%)

Query: 25  DFDFFYFVQQWPGAYCDSKQSCCYPKTGKPTAD----FGIHGLWPNYNDGSWPSNCDPDS 80
           +FD+F    QWPG YC   + CC        +D    F IHGLWP+YNDGSWPS C   S
Sbjct: 31  EFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCCY-RS 89

Query: 81  TFDKSEISELISSMEKSWPSLSC--PSS-NGIR--FWSHEWEKHGTCAESELG-QREYFE 134
            F + EIS L+  +EK WPSLSC  PSS NG +  FW HEWEKHGTC+      +  YF 
Sbjct: 90  DFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFL 149

Query: 135 AALKLKEKVNLLQILKNAE-IQPDDEFYSIESIKDAIKEGSGFTPGIECNRDSRGNSQL- 192
             L L  K N+  +L  A  +  + E Y +  I  AI+     TP + C RD+    ++ 
Sbjct: 150 TTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKRDAIDEIRIC 209

Query: 193 -YQVYMCVDTSGSDFIECPVSPRSKCGSDIQFPKF 226
            Y+ +   D  GS      ++ R  C   +  P++
Sbjct: 210 FYKDFKPRDCVGSQ----DLTSRKSCPKYVSLPEY 240


>AT2G39780.2 | Symbols: RNS2 | ribonuclease 2 |
           chr2:16591256-16593515 FORWARD LENGTH=227
          Length = 227

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 95/213 (44%), Gaps = 46/213 (21%)

Query: 25  DFDFFYFVQQWPGAYCDSKQSCCYPKTGKPTAD----FGIHGLWPNYNDGSWPSNCDPDS 80
           +FD+F    QWPG YC   + CC        +D    F IHGLWP+YNDGSWPS C   S
Sbjct: 31  EFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCCY-RS 89

Query: 81  TFDKSEISELISSMEKSWPSLSC--PSS-NGIR--FWSHEWEKHGTCAESELGQREYFEA 135
            F + EIS L+  +EK WPSLSC  PSS NG +  FW H         E  L Q  Y   
Sbjct: 90  DFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGH---------EDVLYQAGY--- 137

Query: 136 ALKLKEKVNLLQILKNAEIQPDDEFYSIESIKDAIKEGSGFTPGIECNRDSRGNSQL--Y 193
                             +  + E Y +  I  AI+     TP + C RD+    ++  Y
Sbjct: 138 ------------------VASNSEKYPLGGIVTAIQNAFHITPEVVCKRDAIDEIRICFY 179

Query: 194 QVYMCVDTSGSDFIECPVSPRSKCGSDIQFPKF 226
           + +   D  GS      ++ R  C   +  P++
Sbjct: 180 KDFKPRDCVGSQ----DLTSRKSCPKYVSLPEY 208