Miyakogusa Predicted Gene

Lj2g3v1277660.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1277660.1 tr|Q259U2|Q259U2_ORYSA H0913C04.2 protein
OS=Oryza sativa GN=H0913C04.2 PE=3 SV=1,51.35,3e-19,A_tha_TIGR01569:
plant integral membrane protein T,Uncharacterised protein family
UPF0497, trans-mem,CUFF.36657.1
         (186 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G15290.1 | Symbols:  | Uncharacterised protein family (UPF049...   155   2e-38
AT2G36100.1 | Symbols:  | Uncharacterised protein family (UPF049...   138   3e-33
AT2G27370.1 | Symbols:  | Uncharacterised protein family (UPF049...   135   1e-32
AT5G06200.1 | Symbols:  | Uncharacterised protein family (UPF049...   130   5e-31
AT3G11550.1 | Symbols:  | Uncharacterised protein family (UPF049...   126   7e-30
AT1G14160.1 | Symbols:  | Uncharacterised protein family (UPF049...   124   4e-29
AT4G03540.1 | Symbols:  | Uncharacterised protein family (UPF049...    55   2e-08
AT5G44550.1 | Symbols:  | Uncharacterised protein family (UPF049...    52   2e-07
AT1G03700.1 | Symbols:  | Uncharacterised protein family (UPF049...    51   4e-07

>AT5G15290.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:4967094-4967846 FORWARD LENGTH=187
          Length = 187

 Score =  155 bits (391), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 100/166 (60%)

Query: 1   MKGGSIEIGEVSKGASQRKGMKRGLSIMDFILRIXXXXXXXXXXXXXXXXEESLPFVTNF 60
           MK G  EI E SKG  +   M R ++I++FILRI                 E+LPF T F
Sbjct: 1   MKSGQAEIMETSKGIQKSGLMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQF 60

Query: 61  MQFRAEYDDLPSFVFFVLANSLVCGYLVLSLILSVFHIVRSSAVKSRVLLIVFDTVMXXX 120
           ++F+AEY+DLP+  FFV+AN++V GYL+LSL L+  HIV+     +R+LLI+ D  M   
Sbjct: 61  IRFQAEYNDLPALTFFVVANAVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGL 120

Query: 121 XXXXXXXXXXXXXXXHNGNSKANWFPICQQFNNYCQQASGSVVGSY 166
                          HNGN+K NWF ICQQFN++C++ SGS++GS+
Sbjct: 121 LTSGASSAAAIVYLAHNGNNKTNWFAICQQFNSFCERISGSLIGSF 166


>AT2G36100.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:15159744-15160669 REVERSE LENGTH=206
          Length = 206

 Score =  138 bits (347), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 86/149 (57%)

Query: 16  SQRKGMKRGLSIMDFILRIXXXXXXXXXXXXXXXXEESLPFVTNFMQFRAEYDDLPSFVF 75
           + R G KRGL+I DF+LR+                EE+LPF T F+QF+A YDDLP+F +
Sbjct: 36  ASRGGAKRGLAIFDFLLRLAAIAVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQY 95

Query: 76  FVLANSLVCGYLVLSLILSVFHIVRSSAVKSRVLLIVFDTVMXXXXXXXXXXXXXXXXXX 135
           FV+A ++V  YLVLSL  S+  IVR  AV  R++L++ DT++                  
Sbjct: 96  FVIAVAVVASYLVLSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLA 155

Query: 136 HNGNSKANWFPICQQFNNYCQQASGSVVG 164
           HNGN   NW PICQQF ++CQ  S +VV 
Sbjct: 156 HNGNQSTNWLPICQQFGDFCQNVSTAVVA 184


>AT2G27370.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:11708628-11709905 REVERSE LENGTH=221
          Length = 221

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/147 (44%), Positives = 86/147 (58%)

Query: 20  GMKRGLSIMDFILRIXXXXXXXXXXXXXXXXEESLPFVTNFMQFRAEYDDLPSFVFFVLA 79
           G KRG++I DF+LR+                EE+LPF T F+QF+A+Y DLP+   FV+ 
Sbjct: 54  GWKRGVAIFDFVLRLIAAITAMAAAAKMATTEETLPFFTQFLQFQADYTDLPTMSSFVIV 113

Query: 80  NSLVCGYLVLSLILSVFHIVRSSAVKSRVLLIVFDTVMXXXXXXXXXXXXXXXXXXHNGN 139
           NS+V GYL LSL  S+  I+R  AV  R+ LI+ DTVM                  HNGN
Sbjct: 114 NSIVGGYLTLSLPFSIVCILRPLAVPPRLFLILCDTVMMGLTLMAASASAAIVYLAHNGN 173

Query: 140 SKANWFPICQQFNNYCQQASGSVVGSY 166
           S +NW P+CQQF ++CQ  SG+VV S+
Sbjct: 174 SSSNWLPVCQQFGDFCQGTSGAVVASF 200


>AT5G06200.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:1877333-1878116 FORWARD LENGTH=202
          Length = 202

 Score =  130 bits (327), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 97/166 (58%), Gaps = 1/166 (0%)

Query: 1   MKGGSIEIGEVSKGASQRKGMKRGLSIMDFILRIXXXXXXXXXXXXXXXXEESLPFVTNF 60
           +KG +  +G +++  +   G KRGLSI DF+LR+                +E+LPF T F
Sbjct: 18  IKGKAPLLG-LARDHTGSGGYKRGLSIFDFLLRLAAIVAALAAAATMGTSDETLPFFTQF 76

Query: 61  MQFRAEYDDLPSFVFFVLANSLVCGYLVLSLILSVFHIVRSSAVKSRVLLIVFDTVMXXX 120
           +QF A YDDLP+F FFV+A ++V GYLVLSL  SV  IVR  AV  R+LL+V DT     
Sbjct: 77  LQFEASYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTIVRPLAVAPRLLLLVLDTAALAL 136

Query: 121 XXXXXXXXXXXXXXXHNGNSKANWFPICQQFNNYCQQASGSVVGSY 166
                          HNGN+  NW PICQQF ++CQ+ SG+VV ++
Sbjct: 137 DTAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAVVSAF 182


>AT3G11550.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr3:3638262-3639052 FORWARD LENGTH=204
          Length = 204

 Score =  126 bits (317), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 89/161 (55%), Gaps = 1/161 (0%)

Query: 1   MKGGSIEIGEV-SKGASQRKGMKRGLSIMDFILRIXXXXXXXXXXXXXXXXEESLPFVTN 59
           MKG +  IG       S   G  RGL+I DF+LR+                +E+LPF T 
Sbjct: 18  MKGKAPLIGVARDHTTSGSGGYNRGLAIFDFLLRLAAIVAALAAAATMGTSDETLPFFTQ 77

Query: 60  FMQFRAEYDDLPSFVFFVLANSLVCGYLVLSLILSVFHIVRSSAVKSRVLLIVFDTVMXX 119
           F+QF A YDDLP+F FFV+A +LV GYLVLSL +SV  I+R  A   R+LL+V DT +  
Sbjct: 78  FLQFEASYDDLPTFQFFVIAMALVGGYLVLSLPISVVTILRPLATAPRLLLLVLDTGVLA 137

Query: 120 XXXXXXXXXXXXXXXXHNGNSKANWFPICQQFNNYCQQASG 160
                           H+GN   NW PICQQF ++CQ++SG
Sbjct: 138 LNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDFCQKSSG 178


>AT1G14160.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr1:4840798-4841660 REVERSE LENGTH=209
          Length = 209

 Score =  124 bits (310), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 6/187 (3%)

Query: 6   IEIGEVSKGASQ------RKGMKRGLSIMDFILRIXXXXXXXXXXXXXXXXEESLPFVTN 59
           IE GE S+ + +      +  + +G+S++ F+LR+                 ES+  ++ 
Sbjct: 23  IEAGETSRSSRKLITFEPKLVINKGISVLGFVLRLFAVFGTIGSALAMGTTHESVVSLSQ 82

Query: 60  FMQFRAEYDDLPSFVFFVLANSLVCGYLVLSLILSVFHIVRSSAVKSRVLLIVFDTVMXX 119
            +  + +Y DLP+ +FFV+AN++  GYLVLSL +S+FHI  + A  SR++L+V DTVM  
Sbjct: 83  LVLLKVKYSDLPTLMFFVVANAISGGYLVLSLPVSIFHIFSTQAKTSRIILLVVDTVMLA 142

Query: 120 XXXXXXXXXXXXXXXXHNGNSKANWFPICQQFNNYCQQASGSVVGSYXXXXXXXXXXXXX 179
                           H GN+ ANW PICQQF+ +C++ SGS++GS+             
Sbjct: 143 LVSSGASAATATVYLAHEGNTTANWPPICQQFDGFCERISGSLIGSFCAVILLMLIVINS 202

Query: 180 XXXXSRH 186
               SRH
Sbjct: 203 AISLSRH 209


>AT4G03540.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:1570042-1571483 FORWARD LENGTH=164
          Length = 164

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 7/106 (6%)

Query: 61  MQFRAEYDDLPSFVFFVLANSLVCGYLVLSLILSVFHIVRSSAVKSRVLLIVFDTVMXXX 120
           +   A+Y D+ +F +FV+AN++V  Y  L L L    ++          ++V D VM   
Sbjct: 40  ISLEAKYTDMAAFKYFVIANAVVSVYSFLVLFLPKESLLWK-------FVVVLDLVMTML 92

Query: 121 XXXXXXXXXXXXXXXHNGNSKANWFPICQQFNNYCQQASGSVVGSY 166
                            GN+ A W PIC Q   +C Q +G+++  +
Sbjct: 93  LTSSLSAALAVAQVGKKGNANAGWLPICGQVPKFCDQITGALIAGF 138


>AT5G44550.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:17942100-17943174 REVERSE LENGTH=197
          Length = 197

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 2/106 (1%)

Query: 62  QFRAEYDDLPSFVFFVLANSLVCGYLVLSLILSVFHIVRSSAVKSRVLLI-VFDTVMXXX 120
            F A++D  P+FVFFV+AN++V  + +L + L +F   +      R+L + + D +    
Sbjct: 59  TFTAKFDHTPAFVFFVVANAMVSFHNLLMIALQIFG-GKMEFTGFRLLSVAILDMLNVTL 117

Query: 121 XXXXXXXXXXXXXXXHNGNSKANWFPICQQFNNYCQQASGSVVGSY 166
                           NGN  A W  IC +F  YC   +G+++ ++
Sbjct: 118 ISAAANAAAFMAEVGKNGNKHARWDKICDRFATYCDHGAGALIAAF 163


>AT1G03700.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr1:921038-921844 FORWARD LENGTH=164
          Length = 164

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 7/100 (7%)

Query: 65  AEYDDLPSFVFFVLANSLVCGYLVLSLILSVFHIVRSSAVKSRVLLIVFDTVMXXXXXXX 124
           A+Y DL +F +FV+AN++V  Y  L L L      + S +   V  +V D ++       
Sbjct: 44  AKYSDLAAFKYFVIANAIVTVYSFLVLFLP-----KESLLWKFV--VVLDLMVTMLLTSS 96

Query: 125 XXXXXXXXXXXHNGNSKANWFPICQQFNNYCQQASGSVVG 164
                        GN+ A W PIC Q   +C Q +G+++ 
Sbjct: 97  LSAAVAVAQVGKRGNANAGWLPICGQVPRFCDQITGALIA 136