Miyakogusa Predicted Gene

Lj2g3v1277590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1277590.1 tr|A9RG92|A9RG92_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65723
,33.63,3e-18,Arabinanase/levansucrase/invertase,Glycosyl hydrolase
family 43, five-bladed beta-propellor domain; ,CUFF.36651.1
         (496 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26761.1 | Symbols:  | Arabinanase/levansucrase/invertase | c...   442   e-124

>AT1G26761.1 | Symbols:  | Arabinanase/levansucrase/invertase |
           chr1:9250269-9251603 REVERSE LENGTH=444
          Length = 444

 Score =  442 bits (1136), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 222/386 (57%), Positives = 275/386 (71%), Gaps = 13/386 (3%)

Query: 120 ACSRGLVFDLGPS-NSWDGAEIGSPVVKRFLSDEEERWYMWYHGRSEGDXXXXXXXXXXX 178
           +  RGLVFDLG S +SW   EIGSPVVKRFLSD EERWYMWYHG S+ +           
Sbjct: 63  SLKRGLVFDLGVSKDSWHSEEIGSPVVKRFLSDNEERWYMWYHGSSKQNPVSDSIGLAVS 122

Query: 179 XNGVHWERGGGPSRSSSDVGSVMNCGKDWWVFDTHGVRPSETVIMSSSRVRAPPGVYWLY 238
            NG+HWERG G   SS DVG VM+CG+DWW FDT  VRP E VIMSSS+VRA   VYW+Y
Sbjct: 123 NNGIHWERGNGKVESSEDVGLVMSCGEDWWGFDTASVRPGEVVIMSSSKVRANSSVYWMY 182

Query: 239 YTGYSSETAEVTDHSMEFCLENPDRC-LINDGVNQGECGKWNVLKSLPGLAISQDGRHWA 297
           YTGY+ ET E         L NP+R  L ++   +         +SLPGLAISQDGRHWA
Sbjct: 183 YTGYTKETVEFQSQDFTSVLGNPERFHLCDENAEKSRV----YYRSLPGLAISQDGRHWA 238

Query: 298 RIEGEHHSGALIDVGSEKDWDSLFISSPHVVYHENGDLRMYYHSFDLEKGHFAVGIARSR 357
           RIEGEHHSGAL DVGSEKDWD L+I+SPHVV+H +GDLRMYYHSFD + G F +G+ARSR
Sbjct: 239 RIEGEHHSGALFDVGSEKDWDFLYIASPHVVFHGDGDLRMYYHSFDEKTGEFCIGMARSR 298

Query: 358 DGVRWVKLGKVIGGGKT-----GSFDEFGAMNPCVMRNRFEWNYMMAYEGVAADGRRSIG 412
           DG++W+KLGK++GG K+     G FDE G   PCV RN+ + +Y+MAYEGV   G+ SIG
Sbjct: 299 DGIKWLKLGKILGGRKSEKDGLGFFDELGGRYPCVTRNKRDESYVMAYEGVDRTGKTSIG 358

Query: 413 MAISPNGLKEWVRLQD-EAILEPSDRGCWDDKDVGSPCLVQMDKE-ENELRLYYRGVGNE 470
            A+S +G+K+W R+QD EA++   + G WD++ VG P L++MD + +++ RLYYRGVGN 
Sbjct: 359 FAVSKDGIKDWKRVQDEEAVIAVGEGGAWDNEGVGCPYLIEMDGDSDHQWRLYYRGVGNG 418

Query: 471 GRVGIGMAVSEGKDVRSFRRWTGFHL 496
           GR GIG+AVS+G  + SF + TG HL
Sbjct: 419 GRTGIGLAVSQGNVITSFTKQTGIHL 444