Miyakogusa Predicted Gene

Lj2g3v1277530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1277530.1 Non Chatacterized Hit- tr|H2MTB0|H2MTB0_ORYLA
Uncharacterized protein OS=Oryzias latipes GN=C1orf35
,73.68,6e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL;
coiled-coil,NULL; MMtag,Kinase phosphoryla,CUFF.36652.1
         (218 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G52220.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Kinase pho...   219   1e-57

>AT3G52220.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Kinase
           phosphorylation domain (InterPro:IPR019315); Has 8882
           Blast hits to 4920 proteins in 346 species: Archae - 10;
           Bacteria - 184; Metazoa - 3955; Fungi - 1221; Plants -
           712; Viruses - 24; Other Eukaryotes - 2776 (source: NCBI
           BLink). | chr3:19369580-19370980 REVERSE LENGTH=237
          Length = 237

 Score =  219 bits (558), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 103/144 (71%), Positives = 115/144 (79%)

Query: 1   MYHPTRGGVRGGRDQFTWDDVKVDKHRENYLGHSIKAPVGRWQKGKDLFWYARDKKSQTX 60
           MYHPTRGGVRGGRDQF+WD+VK DK+RENYLGHSIKAPVGRWQKGKDL WYARDKK +  
Sbjct: 1   MYHPTRGGVRGGRDQFSWDEVKADKYRENYLGHSIKAPVGRWQKGKDLHWYARDKKQKGS 60

Query: 61  XXXXXXXXXXXXXXXXXQAMREALGLAPKRANRPQGNRLDKHEFSELVKRGSTAEDLGAG 120
                            QAMREALGLAPK + RPQGNRLDK EF+ELVKRGSTAEDLGAG
Sbjct: 61  EMDAMKEEIQRVKEQEEQAMREALGLAPKSSTRPQGNRLDKQEFTELVKRGSTAEDLGAG 120

Query: 121 HAEAASVQGLGFAKAPQPWEEPGS 144
           +A+A  V GLG+AKAP+PWE+P +
Sbjct: 121 NADAVWVHGLGYAKAPRPWEDPST 144