Miyakogusa Predicted Gene
- Lj2g3v1266100.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1266100.1 Non Chatacterized Hit- tr|I1QGW6|I1QGW6_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1,24.36,8e-17,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT
,NODE_57040_length_2615_cov_9.824474.path1.1
(517 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 370 e-102
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 351 9e-97
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 350 1e-96
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 4e-96
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 346 2e-95
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 346 2e-95
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 5e-95
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 1e-94
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 338 6e-93
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 4e-92
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 331 8e-91
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 328 6e-90
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 327 2e-89
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 2e-89
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 324 9e-89
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 320 1e-87
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 6e-86
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 314 1e-85
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 2e-85
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 311 6e-85
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 3e-83
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 6e-83
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 302 3e-82
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 302 3e-82
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 4e-82
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 301 5e-82
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 6e-82
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 293 2e-79
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 3e-78
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 288 5e-78
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 6e-78
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 285 6e-77
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 4e-76
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 279 3e-75
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 279 4e-75
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 5e-75
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 9e-74
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 7e-73
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 9e-73
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 2e-72
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 269 3e-72
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 7e-72
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 4e-71
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 265 4e-71
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 5e-71
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 8e-71
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 261 1e-69
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 259 3e-69
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 258 6e-69
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 258 8e-69
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 1e-68
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 7e-68
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 253 2e-67
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 4e-67
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 252 5e-67
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 8e-67
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 8e-67
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 9e-67
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 6e-66
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 4e-65
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 243 2e-64
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 3e-64
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 4e-64
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 242 4e-64
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 1e-63
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 1e-63
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 2e-63
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 5e-63
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 5e-63
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 6e-63
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 236 2e-62
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 236 2e-62
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 3e-62
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 235 6e-62
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 7e-62
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 3e-61
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 4e-61
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 5e-61
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 232 6e-61
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 1e-60
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 2e-60
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 6e-60
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 1e-59
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 227 2e-59
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 3e-59
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 4e-59
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 5e-59
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 6e-59
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 3e-57
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 219 3e-57
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 219 3e-57
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 4e-57
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 2e-56
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 215 5e-56
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 6e-56
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 1e-55
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 213 3e-55
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 1e-54
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 4e-54
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 6e-54
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 9e-54
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 5e-53
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 204 1e-52
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 5e-51
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 6e-51
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 8e-51
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 4e-50
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 7e-48
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 188 8e-48
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 186 3e-47
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 5e-47
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 1e-44
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 8e-42
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 6e-40
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 2e-36
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 9e-31
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 7e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 8e-20
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 8e-19
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 90 5e-18
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 86 7e-17
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 84 3e-16
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 77 4e-14
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-14
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 7e-14
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 76 7e-14
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 75 8e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 75 1e-13
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 74 2e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 71 2e-12
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 67 3e-11
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 67 3e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 67 4e-11
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 66 6e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 63 4e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 61 2e-09
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 59 6e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 59 1e-08
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 58 1e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 58 1e-08
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 57 3e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 2e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 54 2e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 52 1e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 50 3e-06
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 3e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/511 (38%), Positives = 288/511 (56%), Gaps = 6/511 (1%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFC-SHPHQGSLTYACKVFQRIQH 67
++ L++C ++LKQ HA++ +GL +S+A+++ L+FC S L YA VF
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
P + N +I+ F + R+L ++ ML + + YT P LKAC+ L I
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
H +KLG D++ NSLI Y V G+ A +FD IP VSW+ +I GY K G +
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
D+A F + EK+ W MISGYVQ + KE L LF MQ +D+ PD + LSAC
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWN 307
A +GAL+ G W+H YLN+ R+ + L L+DMYAKCG ++ A +F ++ + + W
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 308 AMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSV 367
A+ISG A HG G A+ F EM+K+GIKP+ ITF AV TACSY+G+ EG + M
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377
Query: 368 YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
YN++P EHYGC+VDLL R G +EA I+ + N + W A L AC H +
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNA----VIWGALLKACRIHKNIE 433
Query: 428 LATLAAESLVRLDN-PSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEID 486
L E L+ +D G YV +N++A + R +MK + V K PGCS++ ++
Sbjct: 434 LGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLE 493
Query: 487 GVVMEFIAGEKTHPQMDEIHSILEKMHLQLD 517
G EF+AG+++HP++++I S M +L+
Sbjct: 494 GTTHEFLAGDRSHPEIEKIQSKWRIMRRKLE 524
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/504 (36%), Positives = 298/504 (59%), Gaps = 8/504 (1%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
+ L++ K+ + K+ +A + GL +SF +++++ FC + YA ++F ++ +P
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIE--DMDYATRLFNQVSNP 71
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLS-PDNYTIPYALKACAALRDHSLGEMI 127
V + N+II+A+ N + ++ +LR PD +T P+ K+CA+L LG+ +
Sbjct: 72 NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQV 131
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
HG+ K G F + N+LI MY F D+V A KVFDE+ +SW+ ++SGYA++G +
Sbjct: 132 HGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQM 191
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
A+ F +K W AMISGY C+ E + FR MQL I PDE +S+L +C
Sbjct: 192 KKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSC 251
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWN 307
A +G+L+ G W+H Y R + +L++MY+KCG + A +LF M +D++ W+
Sbjct: 252 AQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWS 311
Query: 308 AMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSV 367
MISG A HG+ GA++ F+EM++ +KP+ ITF+ + +ACS+ GM EGL+ D M
Sbjct: 312 TMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQD 371
Query: 368 YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
Y +EPK EHYGCL+D+L+R G E A+ IT + ++ W + LS+C G
Sbjct: 372 YQIEPKIEHYGCLIDVLARAGKLERAV----EITKTMPMKPDSKIWGSLLSSCRTPGNLD 427
Query: 428 LATLAAESLVRLDNPS-GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEID 486
+A +A + LV L+ G YVL++N+YA G+ DV R+R +++N+ + K PG S +E++
Sbjct: 428 VALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVN 487
Query: 487 GVVMEFIAGEKTHPQMDEIHSILE 510
+V EF++G+ + P EI +L+
Sbjct: 488 NIVQEFVSGDNSKPFWTEISIVLQ 511
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 351 bits (900), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 182/512 (35%), Positives = 296/512 (57%), Gaps = 11/512 (2%)
Query: 3 SCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVF 62
S K +++L CKN+ + HA++ + D ++F + ++ CS S+ YA VF
Sbjct: 27 SRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCST--LDSVDYAYDVF 84
Query: 63 QRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHS 122
+ +P V + +I F+ +G + ++ M+ N + PDNY I LKAC D
Sbjct: 85 SYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLK 140
Query: 123 LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYA 182
+ IH KLG VG ++ +Y G++V A+K+FDE+P V+ ++MI+ Y+
Sbjct: 141 VCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYS 200
Query: 183 KVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVS 242
+ G + A F + KD W AMI G V+N + L LFR MQ+ ++ +E V
Sbjct: 201 ECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVC 260
Query: 243 ILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRD 302
+LSAC+ +GAL+ G WVH ++ R+ LS + +L++MY++CG+++ A+R+F M D+D
Sbjct: 261 VLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKD 320
Query: 303 IVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLD 362
++ +N MISGLAMHG + A+ F +M G +P+ +T +A+ ACS+ G+ GL++ +
Sbjct: 321 VISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFN 380
Query: 363 KMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCN 422
M V+N+EP+ EHYGC+VDLL R G EEA I I + + LSAC
Sbjct: 381 SMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP----IEPDHIMLGTLLSACKI 436
Query: 423 HGQAQLATLAAESLVRLDNP-SGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCS 481
HG +L A+ L +NP SG YVL+SNLYA+SG+ + +R+ M++ ++K PGCS
Sbjct: 437 HGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCS 496
Query: 482 SVEIDGVVMEFIAGEKTHPQMDEIHSILEKMH 513
++E+D + EF+ G+ HP + I+ L++++
Sbjct: 497 TIEVDNQIHEFLVGDIAHPHKEAIYQRLQELN 528
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 189/500 (37%), Positives = 290/500 (58%), Gaps = 8/500 (1%)
Query: 14 KCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCIC 73
+C M++LKQ HA + +GL +++ SRVLAFC + YA VF RI H +
Sbjct: 34 QCSTMRELKQIHASLIKTGLISDTVTASRVLAFCC-ASPSDMNYAYLVFTRINHKNPFVW 92
Query: 74 NTIIKAFLINGNLNRTLHVFTNML--RNGLSPDNYTIPYALKACAALRDHSLGEMIHGYS 131
NTII+ F + + +F +ML + P T P KA L G +HG
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 132 SKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLAR 191
K GL D F+ N+++ MY G ++ A ++F + V+W+ MI G+AK G +D A+
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 192 LFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMG 251
FDE P+++ W +MISG+V+N FK+ L +FR MQ D+ PD VS+L+ACA++G
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLG 272
Query: 252 ALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMIS 311
A + G W+H Y+ R R L+ + T+L+DMY KCG ++ +F+ P + + CWN+MI
Sbjct: 273 ASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMIL 332
Query: 312 GLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNME 371
GLA +G A+ LFSE+E+ G++PD ++FI V TAC++SG + M Y +E
Sbjct: 333 GLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIE 392
Query: 372 PKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATL 431
P +HY +V++L G EEA +I+ + E+T+ W + LSAC G ++A
Sbjct: 393 PSIKHYTLMVNVLGGAGLLEEAEALIKNMPV----EEDTVIWSSLLSACRKIGNVEMAKR 448
Query: 432 AAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVM 490
AA+ L +LD + + YVL+SN YA+ G + R +MK ++++K GCSS+E+D V
Sbjct: 449 AAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVH 508
Query: 491 EFIAGEKTHPQMDEIHSILE 510
EFI+ THP+ EI+S+L+
Sbjct: 509 EFISCGGTHPKSAEIYSLLD 528
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 348 bits (894), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 188/514 (36%), Positives = 304/514 (59%), Gaps = 18/514 (3%)
Query: 6 KRCLTLLEKCKNMKQLKQAHAQVFTSGL----DNNSFALSRVLAFCSHPHQGSLTYACKV 61
++ L++K +++ ++ Q HA + L L A+ SH G + ++ +
Sbjct: 30 EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASH---GKIRHSLAL 86
Query: 62 FQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDH 121
F + P + + I ING ++ ++ +L + ++P+ +T LK+C+
Sbjct: 87 FHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST---- 142
Query: 122 SLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGY 181
G++IH + K GL D +V L+ +Y GD+V+A+KVFD +P S VS + MI+ Y
Sbjct: 143 KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCY 202
Query: 182 AKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLF-RLMQLTDIGPDESIF 240
AK G+V+ AR FD E+D W MI GY Q+ + L LF +L+ PDE
Sbjct: 203 AKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITV 262
Query: 241 VSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD 300
V+ LSAC+ +GAL+TG W+H ++ +R+ L++++ T L+DMY+KCG+L+ A +F+ P
Sbjct: 263 VAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 322
Query: 301 RDIVCWNAMISGLAMHGDGIGALKLFSEMEKL-GIKPDDITFIAVFTACSYSGMASEGLK 359
+DIV WNAMI+G AMHG AL+LF+EM+ + G++P DITFI AC+++G+ +EG++
Sbjct: 323 KDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIR 382
Query: 360 LLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSA 419
+ + M Y ++PK EHYGCLV LL R G + A I+ + N +++ W + L +
Sbjct: 383 IFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNM----NMDADSVLWSSVLGS 438
Query: 420 CCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAP 478
C HG L AE L+ L+ SG+YVL+SN+YA+ G + V +VR++MK K + K P
Sbjct: 439 CKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEP 498
Query: 479 GCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
G S++EI+ V EF AG++ H + EI+++L K+
Sbjct: 499 GISTIEIENKVHEFRAGDREHSKSKEIYTMLRKI 532
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/511 (34%), Positives = 297/511 (58%), Gaps = 11/511 (2%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCS-----HPHQGSLTYACKVFQ 63
L LL+ C + LK H + + L ++ F SR+LA C + L YA +F
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 64 RIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSL 123
+IQ+P + + N +I+ F ++ +T ML++ + PDN T P+ +KA + + +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 124 GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK 183
GE H + G D++V NSL+ MY G + AA ++F ++ VSW+ M++GY K
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 184 VGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
G V+ AR FDE P ++ W MI+GY +NNCF++ + LF M+ + +E++ VS+
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI 303
+S+CAH+GAL+ G + Y+ ++ + +++ L T+L+DM+ +CG+++ A +F+ +P+ D
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDK 363
+ W+++I GLA+HG A+ FS+M LG P D+TF AV +ACS+ G+ +GL++ +
Sbjct: 316 LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYEN 375
Query: 364 MFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNH 423
M + +EP+ EHYGC+VD+L R G EA I ++ N A L AC +
Sbjct: 376 MKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAP----ILGALLGACKIY 431
Query: 424 GQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSS 482
++A L+++ SG YVL+SN+YA +G+ + +RD+MK K V K PG S
Sbjct: 432 KNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSL 491
Query: 483 VEIDGVVMEFIAG-EKTHPQMDEIHSILEKM 512
+EIDG + +F G ++ HP+M +I E++
Sbjct: 492 IEIDGKINKFTMGDDQKHPEMGKIRRKWEEI 522
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 346 bits (887), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/503 (37%), Positives = 296/503 (58%), Gaps = 13/503 (2%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
++ H +GL+ +S+ + ++ + G + KVF + V N +I +++
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGM--YASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 82 INGNLNRTLHVFTNMLR-NGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDI 140
NG + VF M + + L D TI L AC+AL++ +GE I+ + +
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSV 182
Query: 141 FVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEK 200
+GN+L+ M+C G + AR VFD + + W+ M+ GY G +D AR+ F+ +P K
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 201 DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVH 260
D +W AM++GYVQ N F E L LFR MQ I PD + VS+L+ CA GAL+ G W+H
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIH 302
Query: 261 RYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGI 320
Y+N R+ + + T+L+DMYAKCG ++ A +F + +RD W ++I GLAM+G
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSG 362
Query: 321 GALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCL 380
AL L+ EME +G++ D ITF+AV TAC++ G +EG K+ M +N++PKSEH CL
Sbjct: 363 RALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCL 422
Query: 381 VDLLSRTGFFEEAMVIIRRITNSNNGSEETL--AWRAFLSACCNHGQAQLATLAAESLVR 438
+DLL R G +EA +I ++ S+ETL + + LSA N+G ++A AE L +
Sbjct: 423 IDLLCRAGLLDEAEELIDKMRGE---SDETLVPVYCSLLSAARNYGNVKIAERVAEKLEK 479
Query: 439 LD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEK 497
++ + S + L++++YA++ R DV VR MK+ + K PGCSS+EIDGV EFI G+
Sbjct: 480 VEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDD 539
Query: 498 --THPQMDEIHSIL-EKMHLQLD 517
+HP+MDEI+S+L + +L LD
Sbjct: 540 LLSHPKMDEINSMLHQTTNLMLD 562
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 180/381 (47%), Gaps = 65/381 (17%)
Query: 65 IQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLG 124
+Q P++ + N ++K+ + + L +F + GL PDN+T+P LK+ LR G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 125 EMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKV 184
E +HGY+ K GL FD +V NSL+ MY G + KVFDE+P VSW+
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWN--------- 116
Query: 185 GDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLF-RLMQLTDIGPDESIFVSI 243
+IS YV N F++ + +F R+ Q +++ DE VS
Sbjct: 117 ----------------------GLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVST 154
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI 303
LSAC+ + L+ G ++R++ +S+R+ +L+DM+ KCG LD A+ +FDSM D+++
Sbjct: 155 LSACSALKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNV 213
Query: 304 VCWNAMISGLAMHG------------------------DGI-------GALKLFSEMEKL 332
CW +M+ G G +G AL+LF M+
Sbjct: 214 KCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA 273
Query: 333 GIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEE 392
GI+PD+ +++ T C+ +G +G K + + + LVD+ ++ G E
Sbjct: 274 GIRPDNFVLVSLLTGCAQTGALEQG-KWIHGYINENRVTVDKVVGTALVDMYAKCGCIET 332
Query: 393 AMVIIRRITNSNNGSEETLAW 413
A+ + I + S +L +
Sbjct: 333 ALEVFYEIKERDTASWTSLIY 353
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 345 bits (885), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 191/504 (37%), Positives = 291/504 (57%), Gaps = 9/504 (1%)
Query: 11 LLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTV 70
L +CK+M +L + H + T GL +S+ L+F + G + YA K ++ P
Sbjct: 14 LRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPN 73
Query: 71 CICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGY 130
N +I+ F + N +++ V+ MLR GL PD+ T P+ +K+ + L + LG +H
Sbjct: 74 YGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCS 133
Query: 131 SSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLA 190
K GL +D+F+ N+LI MY F D +ARK+FDE+P + V+W+ ++ YAK GDV A
Sbjct: 134 VVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 193
Query: 191 RLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLF-RLMQLTDIGPDESIFVSILSACAH 249
RL FDE E+D W +MI GYV+ + + L +F ++M++ +E VS++ ACAH
Sbjct: 194 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAH 253
Query: 250 MGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLF--DSMPDRDIVCWN 307
+GAL+ G VHRY+ LPL++ L TSL+DMYAKCG++ A +F S+ + D + WN
Sbjct: 254 LGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWN 313
Query: 308 AMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSV 367
A+I GLA HG +L+LF +M + I PD+ITF+ + ACS+ G+ E K
Sbjct: 314 AIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFF-KSLKE 372
Query: 368 YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
EPKSEHY C+VD+LSR G ++A I + GS A L+ C NHG +
Sbjct: 373 SGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGS----MLGALLNGCINHGNLE 428
Query: 428 LATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEID 486
LA + L+ L + G YV ++N+YA + + R +R+ M+ K V K G S +++D
Sbjct: 429 LAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLD 488
Query: 487 GVVMEFIAGEKTHPQMDEIHSILE 510
G FIA +KTH D+I+++L+
Sbjct: 489 GTRHRFIAHDKTHFHSDKIYAVLQ 512
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 343 bits (880), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/511 (34%), Positives = 296/511 (57%), Gaps = 7/511 (1%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
+ LL+ K+++Q HA+++ G + + + + L YA ++ R + P
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNG--LSPDNYTIPYALKACAALRDHSLGEM 126
T+ N++I+A + ++ + +L +G L PDNYT+ + ++AC LR G
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQ 129
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
+HG + + G D V LI++Y G + + KVF+ IP V + M++ A+ GD
Sbjct: 130 VHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGD 189
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
V AR F+ PE+D W AMISGY Q +E L +F LMQL + + +S+LSA
Sbjct: 190 VVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSA 249
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
C +GALD G W H Y+ R ++ +++RL+T+L+D+YAKCG+++ A +F M ++++ W
Sbjct: 250 CTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTW 309
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
++ ++GLAM+G G L+LFS M++ G+ P+ +TF++V CS G EG + D M +
Sbjct: 310 SSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRN 369
Query: 367 VYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
+ +EP+ EHYGCLVDL +R G E+A+ II+++ + + W + L A +
Sbjct: 370 EFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAA----VWSSLLHASRMYKNL 425
Query: 427 QLATLAAESLVRLDNPS-GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEI 485
+L LA++ ++ L+ + G YVL+SN+YA S +V VR MK+K V K PGCS +E+
Sbjct: 426 ELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEV 485
Query: 486 DGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
+G V EF G+K+HP+ +I ++ + + +L
Sbjct: 486 NGEVHEFFVGDKSHPKYTQIDAVWKDISRRL 516
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 338 bits (867), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 178/476 (37%), Positives = 271/476 (56%), Gaps = 14/476 (2%)
Query: 44 LAFCSHPHQ---------GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFT 94
L SH H G + A KVF + N +I + G + ++V+
Sbjct: 187 LELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYK 246
Query: 95 NMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFG 154
M G+ PD+ T+ + +C+ L D + G+ + Y + GL I + N+L+ M+ G
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 155 DMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQ 214
D+ AR++FD + + VSW+ MISGYA+ G +D++R FD+ EKD +W AMI G VQ
Sbjct: 307 DIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQ 366
Query: 215 NNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRL 274
++ L LF+ MQ ++ PDE + LSAC+ +GALD G+W+HRY+ + L L++ L
Sbjct: 367 AKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVAL 426
Query: 275 STSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGI 334
TSL+DMYAKCGN+ A +F + R+ + + A+I GLA+HGD A+ F+EM GI
Sbjct: 427 GTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGI 486
Query: 335 KPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
PD+ITFI + +AC + GM G +M S +N+ P+ +HY +VDLL R G EEA
Sbjct: 487 APDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEA- 545
Query: 395 VIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLY 453
R+ S + W A L C HG +L AA+ L+ LD + SG+YVL+ +Y
Sbjct: 546 ---DRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMY 602
Query: 454 AASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSIL 509
+ D +R R +M + V+K PGCSS+E++G+V EFI +K+ P+ ++I+ L
Sbjct: 603 GEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRL 658
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 143/455 (31%), Positives = 220/455 (48%), Gaps = 71/455 (15%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
L+LLEKCK + LKQ AQ+ +GL + FA SR++AFC+ L Y+ K+ + I++P
Sbjct: 57 LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGL---SPDNYTIPYALKACAALRDHSLGE 125
+ N I+ F + N + ++ MLR+G PD++T P K CA LR SLG
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
MI G+ KL L V N+ I M+ GDM ARKVFDE P VSW+ +I+GY K+G
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILS 245
+ + A +Y+++LM+ + PD+ + ++S
Sbjct: 237 EAEKA-------------------------------IYVYKLMESEGVKPDDVTMIGLVS 265
Query: 246 ACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGN------------------ 287
+C+ +G L+ G + Y+ L ++I L +L+DM++KCG+
Sbjct: 266 SCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVS 325
Query: 288 -------------LDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGI 334
LD++++LFD M ++D+V WNAMI G G AL LF EM+
Sbjct: 326 WTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNT 385
Query: 335 KPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
KPD+IT I +ACS G G+ + + Y++ LVD+ ++ G EA+
Sbjct: 386 KPDEITMIHCLSACSQLGALDVGI-WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEAL 444
Query: 395 VIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
+ I N +L + A + HG A A
Sbjct: 445 SVFHGIQTRN-----SLTYTAIIGGLALHGDASTA 474
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 335 bits (859), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 192/521 (36%), Positives = 284/521 (54%), Gaps = 42/521 (8%)
Query: 3 SCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVF 62
+ ++R L + CKN++ LKQ HA + +GL +N + ++ S G+L YA K+F
Sbjct: 10 TTNRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLF 69
Query: 63 QRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHS 122
I P V ICN +++ + +T+ ++T M + G+SPD YT + LKAC+ L S
Sbjct: 70 DEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRS 129
Query: 123 LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYA 182
G HG + G + + +V N+LI + GD+ A ++FD+ V+WS M SGYA
Sbjct: 130 NGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYA 189
Query: 183 KVGDVDLARLFFDETP-------------------------------EKDKGIWGAMISG 211
K G +D A FDE P EKD W AMISG
Sbjct: 190 KRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISG 249
Query: 212 YVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRY-LNRARLPL 270
YV KE L +F+ M+ PD +S+LSACA +G L+TG +H Y L A +
Sbjct: 250 YVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSS 309
Query: 271 SIRLST----SLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLF 326
SI + T +L+DMYAKCG++D A +F + DRD+ WN +I GLA+H G++++F
Sbjct: 310 SIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMF 368
Query: 327 SEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSR 386
EM++L + P+++TFI V ACS+SG EG K M +YN+EP +HYGC+VD+L R
Sbjct: 369 EEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGR 428
Query: 387 TGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRL-DNPSGL 445
G EEA + + + N + WR L AC +G +L A E L+ + + SG
Sbjct: 429 AGQLEEAFMFVESMKIEPNA----IVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGD 484
Query: 446 YVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEID 486
YVL+SN+YA++G+ V++VR + + RV K G S +E D
Sbjct: 485 YVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEED 525
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 331 bits (848), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 172/495 (34%), Positives = 284/495 (57%), Gaps = 13/495 (2%)
Query: 22 KQAHAQVFTSGLDNNSF---ALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIK 78
K+ H V GL +N + AL ++ + C G + A VF R V N +I
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLC-----GLMDMARGVFDRRCKEDVFSWNLMIS 209
Query: 79 AFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLF 138
+ ++ + M RN +SP + T+ L AC+ ++D L + +H Y S+
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
+ + N+L+ Y G+M A ++F + + +SW+ ++ GY + G++ LAR +FD+ P
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVW 258
+D+ W MI GY++ CF E L +FR MQ + PDE VS+L+ACAH+G+L+ G W
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 259 VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGD 318
+ Y+++ ++ + + +L+DMY KCG + A+++F M RD W AM+ GLA +G
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 319 GIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYG 378
G A+K+F +M+ + I+PDDIT++ V +AC++SGM + K KM S + +EP HYG
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509
Query: 379 CLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVR 438
C+VD+L R G +EA I+R++ + N ++ W A L A H +A LAA+ ++
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPN----SIVWGALLGASRLHNDEPMAELAAKKILE 565
Query: 439 LDNPSG-LYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEK 497
L+ +G +Y L+ N+YA R D+R VR + + + K PG S +E++G EF+AG+K
Sbjct: 566 LEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDK 625
Query: 498 THPQMDEIHSILEKM 512
+H Q +EI+ LE++
Sbjct: 626 SHLQSEEIYMKLEEL 640
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 203/457 (44%), Gaps = 73/457 (15%)
Query: 7 RCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
R +++L CK Q KQ H+Q T G+ N ++ F G ++YA K+F +I
Sbjct: 36 RFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIP 95
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDH---SL 123
P V + N +IK + + ++ NML+ G++PD++T P+ L RD +
Sbjct: 96 EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLK--RDGGALAC 153
Query: 124 GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK 183
G+ +H + K GL +++V N+L+ MY + G M AR VFD SW+LMISGY +
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 184 VGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
+ + ++E + L M+ + P + +
Sbjct: 214 MKE-------------------------------YEESIELLVEMERNLVSPTSVTLLLV 242
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI 303
LSAC+ + D VH Y++ + S+RL +L++ YA CG +D+A R+F SM RD+
Sbjct: 243 LSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDV 302
Query: 304 VCWNAMISGLAMHG------------------------DGI-------GALKLFSEMEKL 332
+ W +++ G G DG +L++F EM+
Sbjct: 303 ISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSA 362
Query: 333 GIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEE 392
G+ PD+ T ++V TAC++ G G + + ++ L+D+ + G E+
Sbjct: 363 GMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEK 421
Query: 393 AMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
A + + + W A + N+GQ Q A
Sbjct: 422 AQKVFHDMDQ-----RDKFTWTAMVVGLANNGQGQEA 453
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 328 bits (841), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 189/514 (36%), Positives = 279/514 (54%), Gaps = 41/514 (7%)
Query: 1 MSSCSKR---CLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFC-SHPHQGSLT 56
MS CS L+ E+ K++ +++QAHA + +GL +++F+ S+++AF ++P +++
Sbjct: 32 MSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVS 91
Query: 57 YACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACA 116
YA + RI P N++I+A+ + L VF ML + PD Y+ + LKACA
Sbjct: 92 YAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACA 151
Query: 117 ALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSL 176
A G IHG K GL+ D+FV N+L+ +Y G ARKV D +P AVSW+
Sbjct: 152 AFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNS 211
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDI--- 233
++S Y + G VD AR FDE E++ W MISGY KE +F M + D+
Sbjct: 212 LLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSW 271
Query: 234 -----------------------------GPDESIFVSILSACAHMGALDTGVWVHRYLN 264
PD VS+LSACA +G+L G WVH Y++
Sbjct: 272 NAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYID 331
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALK 324
+ + + L+T+L+DMY+KCG +D A +F + RD+ WN++IS L++HG G AL+
Sbjct: 332 KHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALE 391
Query: 325 LFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLL 384
+FSEM G KP+ ITFI V +AC++ GM + KL + M SVY +EP EHYGC+VDLL
Sbjct: 392 IFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLL 451
Query: 385 SRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPS 443
R G EEA ++ I E ++ + L AC GQ + A A L+ L+ S
Sbjct: 452 GRMGKIEEAEELVNEIP----ADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDS 507
Query: 444 GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKA 477
Y +SNLYA+ GR V R M+ +RV+++
Sbjct: 508 SGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRS 541
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/518 (34%), Positives = 284/518 (54%), Gaps = 24/518 (4%)
Query: 12 LEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFC--SHPHQGSLTYACKVFQRIQHPT 69
+ C+ ++ L Q HA SG ++ A + +L FC S H L YA K+F ++
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 70 VCICNTIIKAFLINGNLNRTLHV--FTNMLRNG-LSPDNYTIPYALKACAALRDHSLGEM 126
NTII+ F + + + F M+ + + P+ +T P LKACA G+
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVF--------------DEIPSLSAV 172
IHG + K G D FV ++L+ MY + G M AR +F V
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
W++MI GY ++GD AR+ FD+ ++ W MISGY N FK+ + +FR M+ D
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
I P+ VS+L A + +G+L+ G W+H Y + + + L ++L+DMY+KCG ++ A
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 293 RLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
+F+ +P +++ W+AMI+G A+HG A+ F +M + G++P D+ +I + TACS+ G
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 353 MASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLA 412
+ EG + +M SV +EP+ EHYGC+VDLL R+G +EA I + + +
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPI----KPDDVI 445
Query: 413 WRAFLSACCNHGQAQLATLAAESLVRL-DNPSGLYVLISNLYAASGRHADVRRVRDVMKN 471
W+A L AC G ++ A L+ + + SG YV +SN+YA+ G ++V +R MK
Sbjct: 446 WKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKE 505
Query: 472 KRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSIL 509
K + K PGCS ++IDGV+ EF+ + +HP+ EI+S+L
Sbjct: 506 KDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSML 543
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 290/543 (53%), Gaps = 38/543 (6%)
Query: 8 CLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH 67
CL+LL CKN++ L Q H G+D +S+ +++ C+ +L YA ++
Sbjct: 8 CLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE 67
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLS-PDNYTIPYALKACAALRDHSLGEM 126
P + NT+++ + + + ++ VF M+R G PD+++ + +KA R G
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEI--PSLSA------------- 171
+H + K GL +FVG +LI MY G + ARKVFDE+ P+L A
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 172 ----------------VSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQN 215
SW++M++GY K G+++ A+ F E P +D W MI G N
Sbjct: 188 VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 247
Query: 216 NCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLS 275
F E FR +Q + P+E +LSAC+ G+ + G +H ++ +A + ++
Sbjct: 248 GSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVN 307
Query: 276 TSLLDMYAKCGNLDLAKRLFDSMPD-RDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGI 334
+L+DMY++CGN+ +A+ +F+ M + R IV W +MI+GLAMHG G A++LF+EM G+
Sbjct: 308 NALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 367
Query: 335 KPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
PD I+FI++ ACS++G+ EG +M VY++EP+ EHYGC+VDL R+G ++A
Sbjct: 368 TPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAY 427
Query: 395 VIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLY 453
I ++ + WR L AC +HG +LA + L LD N SG VL+SN Y
Sbjct: 428 DFICQMPIPPTA----IVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAY 483
Query: 454 AASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMH 513
A +G+ DV +R M +R+ K S VE+ + +F AGEK E H L+++
Sbjct: 484 ATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEII 543
Query: 514 LQL 516
L+L
Sbjct: 544 LRL 546
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 324 bits (831), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 176/507 (34%), Positives = 289/507 (57%), Gaps = 12/507 (2%)
Query: 17 NMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTI 76
N+K LKQ+H + +GL+ ++ +++ + CS+ G L YA VF P + NT+
Sbjct: 27 NLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNA--GHLRYAYSVFTHQPCPNTYLHNTM 84
Query: 77 IKAFLINGNLNR---TLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
I+A + N + V+ + PD +T P+ LK + D G IHG
Sbjct: 85 IRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
G + V LI MY G + ARK+FDE+ W+ +++GY KVG++D AR
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 194 FDETP--EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMG 251
+ P +++ W +ISGY ++ E + +F+ M + ++ PDE +++LSACA +G
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 252 ALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMIS 311
+L+ G + Y++ + ++ L+ +++DMYAK GN+ A +F+ + +R++V W +I+
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 312 GLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNME 371
GLA HG G AL +F+ M K G++P+D+TFIA+ +ACS+ G G +L + M S Y +
Sbjct: 325 GLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIH 384
Query: 372 PKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATL 431
P EHYGC++DLL R G EA +I+ + N + W + L+A H +L
Sbjct: 385 PNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAA----IWGSLLAASNVHHDLELGER 440
Query: 432 AAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVM 490
A L++L+ N SG Y+L++NLY+ GR + R +R++MK V K G SS+E++ V
Sbjct: 441 ALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVY 500
Query: 491 EFIAGEKTHPQMDEIHSILEKMHLQLD 517
+FI+G+ THPQ++ IH IL++M LQ+
Sbjct: 501 KFISGDLTHPQVERIHEILQEMDLQIQ 527
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 193/517 (37%), Positives = 287/517 (55%), Gaps = 41/517 (7%)
Query: 5 SKRCLTLLEKCKNMKQLKQAHAQ-VFTSGLDNNSFALSRVLAFCSHP-HQGSLTYACKVF 62
+ CL LL++C N+ + KQ HA+ + S ++SF+ S VLA C+H + S+ YA +F
Sbjct: 30 EQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIF 89
Query: 63 QRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHS 122
+ I P NT+I+ ++ + L + M++ G PDN+T P LKAC L+
Sbjct: 90 RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIR 149
Query: 123 LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYA 182
G+ IHG KLGL D+FV NSLI MY
Sbjct: 150 EGKQIHGQVFKLGLEADVFVQNSLINMY-------------------------------G 178
Query: 183 KVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLM-QLTDIGPDESIFV 241
+ G+++L+ F++ K W +M+S + E L LFR M T++ +ES V
Sbjct: 179 RCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMV 238
Query: 242 SILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR 301
S L ACA+ GAL+ G+ +H +L R L+I + TSL+DMY KCG LD A +F M R
Sbjct: 239 SALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKR 298
Query: 302 DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLL 361
+ + ++AMISGLA+HG+G AL++FS+M K G++PD + +++V ACS+SG+ EG ++
Sbjct: 299 NNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVF 358
Query: 362 DKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACC 421
+M +EP +EHYGCLVDLL R G EEA+ I+ I N + WR FLS C
Sbjct: 359 AEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKN----DVIWRTFLSQCR 414
Query: 422 NHGQAQLATLAAESLVRLD--NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPG 479
+L +AA+ L++L NP G Y+LISNLY+ DV R R + K + + PG
Sbjct: 415 VRQNIELGQIAAQELLKLSSHNP-GDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPG 473
Query: 480 CSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
S VE+ G F++ +++HP+ EI+ +L +M QL
Sbjct: 474 FSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQL 510
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 271/466 (58%), Gaps = 10/466 (2%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G L ACKVF I+ V N++I F+ G+ ++ L +F M + + T+ L
Sbjct: 180 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
ACA +R+ G + Y + + ++ + N+++ MY G + A+++FD + V
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV 299
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT- 231
+W+ M+ GYA D + AR + P+KD W A+IS Y QN E L +F +QL
Sbjct: 300 TWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQK 359
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
++ ++ VS LSACA +GAL+ G W+H Y+ + + ++ ++++L+ MY+KCG+L+ +
Sbjct: 360 NMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYS 351
+ +F+S+ RD+ W+AMI GLAMHG G A+ +F +M++ +KP+ +TF VF ACS++
Sbjct: 420 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 479
Query: 352 GMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETL 411
G+ E L +M S Y + P+ +HY C+VD+L R+G+ E+A+ I + + S
Sbjct: 480 GLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTS---- 535
Query: 412 AWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMK 470
W A L AC H LA +A L+ L+ G +VL+SN+YA G+ +V +R M+
Sbjct: 536 VWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMR 595
Query: 471 NKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEI----HSILEKM 512
+ K PGCSS+EIDG++ EF++G+ HP +++ H ++EK+
Sbjct: 596 VTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKL 641
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 210/451 (46%), Gaps = 70/451 (15%)
Query: 7 RCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
R ++L+E+C +++QLKQ H + +G ++ ++ S++ A + SL YA KVF I
Sbjct: 32 RHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIP 91
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNML-RNGLSPDNYTIPYALKACAALRDHSLGE 125
P NT+I+A+ + ++ F +M+ + P+ YT P+ +KA A + SLG+
Sbjct: 92 KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 151
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
+HG + K + D+FV NSLI Y GD+ +A KVF I VSW+ MI+G+ + G
Sbjct: 152 SLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 211
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILS 245
D A L LF+ M+ D+ V +LS
Sbjct: 212 SPDKA-------------------------------LELFKKMESEDVKASHVTMVGVLS 240
Query: 246 ACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFD--------- 296
ACA + L+ G V Y+ R+ +++ L+ ++LDMY KCG+++ AKRLFD
Sbjct: 241 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 300
Query: 297 ----------------------SMPDRDIVCWNAMISGLAMHGDGIGALKLFSEME-KLG 333
SMP +DIV WNA+IS +G AL +F E++ +
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN 360
Query: 334 IKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEA 393
+K + IT ++ +AC+ G G + + + + L+ + S+ G E++
Sbjct: 361 MKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419
Query: 394 MVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
R + NS + W A + HG
Sbjct: 420 ----REVFNSVE-KRDVFVWSAMIGGLAMHG 445
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/526 (36%), Positives = 283/526 (53%), Gaps = 50/526 (9%)
Query: 2 SSCSKRCLTLLEKCKNMKQ---------LKQAHAQVFTSGLDNNSFALSRVLAF--CSHP 50
S S L ++EKC N+ Q L+Q HA G+ + L + L F S P
Sbjct: 5 SETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLP 64
Query: 51 HQGSLTYACKVFQRIQHP-TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGL-SPDNYTI 108
++YA KVF +I+ P V I NT+I+ + GN ++ M +GL PD +T
Sbjct: 65 SPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTY 124
Query: 109 PYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPS 168
P+ +KA + D LGE IH + G I+V NSL+ +Y GD+ +A KV
Sbjct: 125 PFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKV------ 178
Query: 169 LSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLM 228
FD+ PEKD W ++I+G+ +N +E L L+ M
Sbjct: 179 -------------------------FDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 229 QLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNL 288
I PD VS+LSACA +GAL G VH Y+ + L ++ S LLD+YA+CG +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 289 DLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKL-GIKPDDITFIAVFTA 347
+ AK LFD M D++ V W ++I GLA++G G A++LF ME G+ P +ITF+ + A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 348 CSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGS 407
CS+ GM EG + +M Y +EP+ EH+GC+VDLL+R G ++A I+ + N
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPN-- 391
Query: 408 EETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVR 466
+ WR L AC HG + LA A +++L+ N SG YVL+SN+YA+ R +DV+++R
Sbjct: 392 --VVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIR 449
Query: 467 DVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
M V K PG S VE+ V EF+ G+K+HPQ D I++ L++M
Sbjct: 450 KQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 495
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 315 bits (806), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 178/491 (36%), Positives = 269/491 (54%), Gaps = 15/491 (3%)
Query: 8 CLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFC----------SHPHQGSLTY 57
C LL+ C+ +K L Q HAQ TSG +N F + V A + + ++Y
Sbjct: 7 CSYLLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSY 66
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLN-RTLHVFTNMLRNGLSPDNYTIPYALKACA 116
A VF+ I +P+ NTII+ ++ + + F M R + PD +T P+ KACA
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA 126
Query: 117 ALR--DHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSW 174
A + D +L + +H + + GLL D+F N+LI +Y + + +A ++FDE P V++
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTY 186
Query: 175 SLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG 234
+++I G K ++ AR FD P +D W ++ISGY Q N +E + LF M +
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 235 PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRL 294
PD VS LSACA G G +H Y R RL + L+T L+D YAKCG +D A +
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 295 FDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMA 354
F+ D+ + WNAMI+GLAMHG+G + F +M GIKPD +TFI+V CS+SG+
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV 366
Query: 355 SEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWR 414
E L D+M S+Y++ + +HYGC+ DLL R G EEA +I ++ E+ LAW
Sbjct: 367 DEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWS 426
Query: 415 AFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVM-KNK 472
L C HG ++A AA + L G+Y ++ +YA + R +V +VR+++ ++K
Sbjct: 427 GLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDK 486
Query: 473 RVDKAPGCSSV 483
+V K G S V
Sbjct: 487 KVKKNVGFSKV 497
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 277/510 (54%), Gaps = 38/510 (7%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSH-PHQGSLTYACKVFQRIQH 67
+ L+ KC ++++L Q A S +++ SF +++++ FC+ P + S++YA +F+ +
Sbjct: 33 ILLISKCNSLRELMQIQAYAIKSHIEDVSF-VAKLINFCTESPTESSMSYARHLFEAMSE 91
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
P + I N++ + + N +F +L +G+ PDNYT P LKACA + G +
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
H S KLGL +++V +LI MY + DV
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMY-------------------------------TECEDV 180
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
D AR FD E + AMI+GY + N E L LFR MQ + P+E +S+LS+C
Sbjct: 181 DSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSC 240
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWN 307
A +G+LD G W+H+Y + ++++T+L+DM+AKCG+LD A +F+ M +D W+
Sbjct: 241 ALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWS 300
Query: 308 AMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSV 367
AMI A HG ++ +F M ++PD+ITF+ + ACS++G EG K +M S
Sbjct: 301 AMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK 360
Query: 368 YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
+ + P +HYG +VDLLSR G E+A I ++ S + WR L+AC +H
Sbjct: 361 FGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP----ISPTPMLWRILLAACSSHNNLD 416
Query: 428 LATLAAESLVRLDNP-SGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEID 486
LA +E + LD+ G YV++SNLYA + + V +R VMK+++ K PGCSS+E++
Sbjct: 417 LAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVN 476
Query: 487 GVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
VV EF +G+ ++H L++M +L
Sbjct: 477 NVVHEFFSGDGVKSATTKLHRALDEMVKEL 506
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 313 bits (801), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 285/509 (55%), Gaps = 9/509 (1%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
++ L+ C N+ Q+KQ H V GLD + + L++++ + YA +V + +Q
Sbjct: 53 ISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFR 112
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
+ +I+ + I G + + ++ M + ++P ++T LKAC ++D +LG H
Sbjct: 113 NPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH 172
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVD 188
+ +L ++VGN++I MY + ARKVFDE+P +SW+ +I+ YA+VG+++
Sbjct: 173 AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNME 232
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
A F+ P KD W AM++G+ QN +E L F M+ + I DE +SACA
Sbjct: 233 CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACA 292
Query: 249 HMGALDTGVWVHRYLNRARLPLS--IRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
+GA + ++ S + + ++L+DMY+KCGN++ A +F SM ++++ +
Sbjct: 293 QLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTY 352
Query: 307 NAMISGLAMHGDGIGALKLFSEM-EKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMF 365
++MI GLA HG AL LF M + IKP+ +TF+ ACS+SG+ +G ++ D M+
Sbjct: 353 SSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMY 412
Query: 366 SVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQ 425
+ ++P +HY C+VDLL RTG +EA+ +I+ ++ +G W A L AC H
Sbjct: 413 QTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGG----VWGALLGACRIHNN 468
Query: 426 AQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCS-SV 483
++A +AAE L L+ + G Y+L+SN+YA++G V RVR ++K K + K P S V
Sbjct: 469 PEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVV 528
Query: 484 EIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
+ +G + +F G HP ++I LE++
Sbjct: 529 DKNGQMHKFFPGNLNHPMSNKIQDKLEEL 557
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 311 bits (798), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 183/537 (34%), Positives = 282/537 (52%), Gaps = 69/537 (12%)
Query: 14 KCKNMKQLKQAHAQVFTSGLDNNSFALSRVLA--------------FCSHPHQGSLTY-- 57
K K K+ +Q H V G D + + + +++ F PH+ ++Y
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 58 -------------ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPD 104
A K+F I V N +I + GN L +F +M++ + PD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 105 NYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFD 164
T+ + ACA LG +H + G ++ + N+LI +Y
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY-------------- 311
Query: 165 EIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYL 224
+K G+++ A F+ P KD W +I GY N +KE L L
Sbjct: 312 -----------------SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 225 FRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNR--ARLPLSIRLSTSLLDMY 282
F+ M + P++ +SIL ACAH+GA+D G W+H Y+++ + + L TSL+DMY
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 283 AKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFI 342
AKCG+++ A ++F+S+ + + WNAMI G AMHG + LFS M K+GI+PDDITF+
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFV 474
Query: 343 AVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITN 402
+ +ACS+SGM G + M Y M PK EHYGC++DLL +G F+EA +I +
Sbjct: 475 GLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEM 534
Query: 403 SNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRL--DNPSGLYVLISNLYAASGRHA 460
+G + W + L AC HG +L AE+L+++ +NP G YVL+SN+YA++GR
Sbjct: 535 EPDG----VIWCSLLKACKMHGNVELGESFAENLIKIEPENP-GSYVLLSNIYASAGRWN 589
Query: 461 DVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQLD 517
+V + R ++ +K + K PGCSS+EID VV EFI G+K HP+ EI+ +LE+M + L+
Sbjct: 590 EVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLE 646
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/422 (35%), Positives = 236/422 (55%), Gaps = 11/422 (2%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCS-HPHQGSLTYACKVFQRIQH 67
L+LL CK ++ L+ HAQ+ GL N ++ALS+++ FC PH L YA VF+ IQ
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
P + I NT+ + ++ + L ++ M+ GL P++YT P+ LK+CA + G+ I
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
HG+ KLG D++V SLI+MY G + A KVFD+ P VS++ +I GYA G +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
+ A+ FDE P KD W AMISGY + +KE L LF+ M T++ PDES V+++SAC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWN 307
A G+++ G VH +++ ++++ +L+D+Y+KCG L+ A LF+ +P +D++ WN
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 308 AMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL---LDKM 364
+I G AL LF EM + G P+D+T +++ AC++ G G + +DK
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 365 FSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
+ S L+D+ ++ G E A + I + + S W A + HG
Sbjct: 397 LK--GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS-----WNAMIFGFAMHG 449
Query: 425 QA 426
+A
Sbjct: 450 RA 451
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 263/461 (57%), Gaps = 5/461 (1%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + YA VF + H V NT+I+ + G ++ +F M + + PD + +
Sbjct: 160 GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIV 219
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
AC + I+ + + + D + +L+ MY G M AR+ F ++ +
Sbjct: 220 SACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLF 279
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
+ M+SGY+K G +D A++ FD+T +KD W MIS YV+++ +E L +F M +
Sbjct: 280 VSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG 339
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
I PD S++SACA++G LD WVH ++ L + ++ +L++MYAKCG LD +
Sbjct: 340 IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATR 399
Query: 293 RLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
+F+ MP R++V W++MI+ L+MHG+ AL LF+ M++ ++P+++TF+ V CS+SG
Sbjct: 400 DVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSG 459
Query: 353 MASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLA 412
+ EG K+ M YN+ PK EHYGC+VDL R EA+ +I + ++N +
Sbjct: 460 LVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASN----VVI 515
Query: 413 WRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKN 471
W + +SAC HG+ +L AA+ ++ L+ + G VL+SN+YA R DVR +R VM+
Sbjct: 516 WGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEE 575
Query: 472 KRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
K V K G S ++ +G EF+ G+K H Q +EI++ L+++
Sbjct: 576 KNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEV 616
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 196/430 (45%), Gaps = 24/430 (5%)
Query: 10 TLLEK---CKNMKQLKQAHAQVFTSGLDN--NSFALSRVLAFCSHPHQGSLTYACKVFQR 64
T+LEK CK++ +KQ HA + + +++ NSF + +L+YA VF
Sbjct: 14 TILEKLSFCKSLNHIKQLHAHILRTVINHKLNSF----LFNLSVSSSSINLSYALNVFSS 69
Query: 65 IQHPTVCIC-NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSL 123
I P I N ++ + T+ + + G D ++ LKA + +
Sbjct: 70 IPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFE 129
Query: 124 GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK 183
G +HG + K+ L D FV + MY G + AR VFDE+ V+W+ MI Y +
Sbjct: 130 GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCR 189
Query: 184 VGDVDLARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
G VD A F+E + D+ I ++S + + ++ + D+ D +
Sbjct: 190 FGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHL 249
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
++++ A G +D R R ++ +ST+++ Y+KCG LD A+ +FD
Sbjct: 250 LTALVTMYAGAGCMDMA----REFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE 305
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK 359
+D+VCW MIS AL++F EM GIKPD ++ +V +AC+ G+ + K
Sbjct: 306 KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-K 364
Query: 360 LLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSA 419
+ V +E + L+++ ++ G + + ++ N ++W + ++A
Sbjct: 365 WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRN-----VVSWSSMINA 419
Query: 420 CCNHGQAQLA 429
HG+A A
Sbjct: 420 LSMHGEASDA 429
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 305 bits (780), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 190/567 (33%), Positives = 296/567 (52%), Gaps = 77/567 (13%)
Query: 12 LEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVC 71
L KC N+ Q+KQ HAQ+ L + ++++ S Q +L A +VF ++Q P V
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQVQEPNVH 83
Query: 72 ICNTIIKAFLINGNLNRTLHVFTNMLRN-------------------------------- 99
+CN++I+A N + VF+ M R
Sbjct: 84 LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHI 143
Query: 100 ---GLSPDNYTIPYALKACAA------LRDH-SLGEMIH-----GYSSKLGLLF------ 138
GLS D Y +P AL C + +RD L E + ++S LG L
Sbjct: 144 EKLGLSSDIY-VPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 139 ------------DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
D+ N+++ Y +M A ++F+++P + VSWS M+ GY+K GD
Sbjct: 203 DARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGD 262
Query: 187 VDLARLFFDETPEKDKGI--WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSIL 244
+++AR+ FD+ P K + W +I+GY + KE L M + + D + +SIL
Sbjct: 263 MEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISIL 322
Query: 245 SACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIV 304
+AC G L G+ +H L R+ L + + +LLDMYAKCGNL A +F+ +P +D+V
Sbjct: 323 AACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLV 382
Query: 305 CWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKM 364
WN M+ GL +HG G A++LFS M + GI+PD +TFIAV +C+++G+ EG+ M
Sbjct: 383 SWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSM 442
Query: 365 FSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
VY++ P+ EHYGCLVDLL R G +EA+ +++ + N + W A L AC H
Sbjct: 443 EKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPN----VVIWGALLGACRMHN 498
Query: 425 QAQLATLAAESLVRLD--NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSS 482
+ +A ++LV+LD +P G Y L+SN+YAA+ V +R MK+ V+K G SS
Sbjct: 499 EVDIAKEVLDNLVKLDPCDP-GNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASS 557
Query: 483 VEIDGVVMEFIAGEKTHPQMDEIHSIL 509
VE++ + EF +K+HP+ D+I+ +L
Sbjct: 558 VELEDGIHEFTVFDKSHPKSDQIYQML 584
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 179/539 (33%), Positives = 275/539 (51%), Gaps = 46/539 (8%)
Query: 11 LLEKCKNMKQLKQAHAQVFTSGLD-NNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPT 69
+L+ +++ L+ H+++ L N+S + + A+ S S A KVF I
Sbjct: 48 VLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVAS---ARKVFDEIPERN 104
Query: 70 VCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHG 129
V I N +I++++ NG + VF M + PD+YT P LKAC+ +G IHG
Sbjct: 105 VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG 164
Query: 130 YSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDL 189
++K+GL +FVGN L++MY G + AR V DE+ VSW+ ++ GYA+ D
Sbjct: 165 SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDD 224
Query: 190 A-------------------------------------RLFFDETPEKDKGIWGAMISGY 212
A + F + +K W MI Y
Sbjct: 225 ALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVY 284
Query: 213 VQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSI 272
++N E + L+ M+ PD S+L AC AL G +H Y+ R +L ++
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344
Query: 273 RLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKL 332
L +L+DMYAKCG L+ A+ +F++M RD+V W AMIS G G A+ LFS+++
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 333 GIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEE 392
G+ PD I F+ ACS++G+ EG M Y + P+ EH C+VDLL R G +E
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 464
Query: 393 AMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRL-DNPSGLYVLISN 451
A I+ ++ N W A L AC H + LAA+ L +L SG YVL+SN
Sbjct: 465 AYRFIQDMSMEPNER----VWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSN 520
Query: 452 LYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILE 510
+YA +GR +V +R++MK+K + K PG S+VE++ ++ F+ G+++HPQ DEI+ L+
Sbjct: 521 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELD 579
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 289/501 (57%), Gaps = 8/501 (1%)
Query: 14 KCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCIC 73
K ++++ ++ +A + SG++ N +S ++ + ++ A ++F + +C
Sbjct: 248 KLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM--YMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
N + ++ G L VF M+ +G+ PD ++ A+ +C+ LR+ G+ HGY +
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
G + N+LI MY A ++FD + + + V+W+ +++GY + G+VD A
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 194 FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD-IGPDESIFVSILSACAHMGA 252
F+ PEK+ W +ISG VQ + F+E + +F MQ + + D +SI SAC H+GA
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 253 LDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISG 312
LD W++ Y+ + + L +RL T+L+DM+++CG+ + A +F+S+ +RD+ W A I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 313 LAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEP 372
+AM G+ A++LF +M + G+KPD + F+ TACS+ G+ +G ++ M ++ + P
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 373 KSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLA 432
+ HYGC+VDLL R G EEA+ +I + N + W + L+AC G ++A A
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN----DVIWNSLLAACRVQGNVEMAAYA 661
Query: 433 AESL-VRLDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVME 491
AE + V +G YVL+SN+YA++GR D+ +VR MK K + K PG SS++I G E
Sbjct: 662 AEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHE 721
Query: 492 FIAGEKTHPQMDEIHSILEKM 512
F +G+++HP+M I ++L+++
Sbjct: 722 FTSGDESHPEMPNIEAMLDEV 742
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/527 (27%), Positives = 248/527 (47%), Gaps = 62/527 (11%)
Query: 2 SSCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLA-FCSHPHQGSLTYACK 60
S C+K + L+ CK + +LK H + GLDN+ +++++A C + SL++A +
Sbjct: 29 SKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKE 88
Query: 61 VFQRIQHPTVC-ICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALR 119
VF+ + C + N++I+ + +G N + +F M+ +G+SPD YT P+ L ACA R
Sbjct: 89 VFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR 148
Query: 120 DHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMIS 179
G IHG K+G D+FV NSL+ Y G++ +ARKVFDE+ + VSW+ MI
Sbjct: 149 AKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMIC 208
Query: 180 GYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
GYA+ D A+ D FR+++ ++ P+
Sbjct: 209 GYAR---RDFAKDAVD---------------------------LFFRMVRDEEVTPNSVT 238
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
V ++SACA + L+TG V+ ++ + + ++ + ++L+DMY KC +D+AKRLFD
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSY-----SGMA 354
++ NAM S G AL +F+ M G++PD I+ ++ ++CS G +
Sbjct: 299 ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKS 358
Query: 355 SEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWR 414
G L + S N+ L+D+ + + A I R++N + + W
Sbjct: 359 CHGYVLRNGFESWDNI------CNALIDMYMKCHRQDTAFRIFDRMSN-----KTVVTWN 407
Query: 415 AFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRV 474
+ ++ +G+ A E++ N +IS L S + V M+++
Sbjct: 408 SIVAGYVENGEVDAAWETFETMPE-KNIVSWNTIISGLVQGS-LFEEAIEVFCSMQSQE- 464
Query: 475 DKAPGCSSVEIDGVVMEFIAGEKTH----PQMDEIHSILEKMHLQLD 517
V DGV M IA H I+ +EK +QLD
Sbjct: 465 -------GVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 289/501 (57%), Gaps = 8/501 (1%)
Query: 14 KCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCIC 73
K ++++ ++ +A + SG++ N +S ++ + ++ A ++F + +C
Sbjct: 248 KLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM--YMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
N + ++ G L VF M+ +G+ PD ++ A+ +C+ LR+ G+ HGY +
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
G + N+LI MY A ++FD + + + V+W+ +++GY + G+VD A
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 194 FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD-IGPDESIFVSILSACAHMGA 252
F+ PEK+ W +ISG VQ + F+E + +F MQ + + D +SI SAC H+GA
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 253 LDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISG 312
LD W++ Y+ + + L +RL T+L+DM+++CG+ + A +F+S+ +RD+ W A I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 313 LAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEP 372
+AM G+ A++LF +M + G+KPD + F+ TACS+ G+ +G ++ M ++ + P
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 373 KSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLA 432
+ HYGC+VDLL R G EEA+ +I + N + W + L+AC G ++A A
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN----DVIWNSLLAACRVQGNVEMAAYA 661
Query: 433 AESL-VRLDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVME 491
AE + V +G YVL+SN+YA++GR D+ +VR MK K + K PG SS++I G E
Sbjct: 662 AEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHE 721
Query: 492 FIAGEKTHPQMDEIHSILEKM 512
F +G+++HP+M I ++L+++
Sbjct: 722 FTSGDESHPEMPNIEAMLDEV 742
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/527 (27%), Positives = 248/527 (47%), Gaps = 62/527 (11%)
Query: 2 SSCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLA-FCSHPHQGSLTYACK 60
S C+K + L+ CK + +LK H + GLDN+ +++++A C + SL++A +
Sbjct: 29 SKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKE 88
Query: 61 VFQRIQHPTVC-ICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALR 119
VF+ + C + N++I+ + +G N + +F M+ +G+SPD YT P+ L ACA R
Sbjct: 89 VFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR 148
Query: 120 DHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMIS 179
G IHG K+G D+FV NSL+ Y G++ +ARKVFDE+ + VSW+ MI
Sbjct: 149 AKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMIC 208
Query: 180 GYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
GYA+ D A+ D FR+++ ++ P+
Sbjct: 209 GYAR---RDFAKDAVD---------------------------LFFRMVRDEEVTPNSVT 238
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
V ++SACA + L+TG V+ ++ + + ++ + ++L+DMY KC +D+AKRLFD
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSY-----SGMA 354
++ NAM S G AL +F+ M G++PD I+ ++ ++CS G +
Sbjct: 299 ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKS 358
Query: 355 SEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWR 414
G L + S N+ L+D+ + + A I R++N + + W
Sbjct: 359 CHGYVLRNGFESWDNI------CNALIDMYMKCHRQDTAFRIFDRMSN-----KTVVTWN 407
Query: 415 AFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRV 474
+ ++ +G+ A E++ N +IS L S + V M+++
Sbjct: 408 SIVAGYVENGEVDAAWETFETMPE-KNIVSWNTIISGLVQGS-LFEEAIEVFCSMQSQE- 464
Query: 475 DKAPGCSSVEIDGVVMEFIAGEKTH----PQMDEIHSILEKMHLQLD 517
V DGV M IA H I+ +EK +QLD
Sbjct: 465 -------GVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 302 bits (773), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/515 (33%), Positives = 285/515 (55%), Gaps = 12/515 (2%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSG-LDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH 67
L L++ + ++KQ H + SG L ++ + ++ F + G+ A KVF R+ H
Sbjct: 137 LYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKF--YMELGNFGVAEKVFARMPH 194
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
P V N +I + G L ++ M+ +G+ PD YT+ L C L D LG+ +
Sbjct: 195 PDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGV 254
Query: 128 HGYSSKLGLLF--DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
HG+ + G ++ ++ + N+L+ MY + A++ FD + SW+ M+ G+ ++G
Sbjct: 255 HGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLG 314
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLY-LFRLMQLTD-IGPDESIFVSI 243
D++ A+ FD+ P++D W +++ GY + C + + LF M + + + PD VS+
Sbjct: 315 DMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSL 374
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI 303
+S A+ G L G WVH + R +L LS++L+DMY KCG ++ A +F + ++D+
Sbjct: 375 ISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDV 434
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDK 363
W +MI+GLA HG+G AL+LF M++ G+ P+++T +AV TACS+SG+ EGL + +
Sbjct: 435 ALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNH 494
Query: 364 MFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNH 423
M + +P++EHYG LVDLL R G EEA I+++ W + LSAC
Sbjct: 495 MKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQS---MWGSILSACRGG 551
Query: 424 GQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSS 482
+ A LA L++L+ G YVL+SN+YA GR + R+ M+N+ V K G SS
Sbjct: 552 EDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSS 611
Query: 483 VEIDGVVMEFIAGEK-THPQMDEIHSILEKMHLQL 516
V + F+A EK HP+ EI IL+ ++ ++
Sbjct: 612 VVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEM 646
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 204/462 (44%), Gaps = 83/462 (17%)
Query: 7 RCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
+ L LLE C + Q KQ AQ+ L ++F +SR++ F + + +L A +F
Sbjct: 36 QSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFT 95
Query: 67 -HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGE 125
+P V + NT+I A ++ + N ++++M+R+ +SPD T Y +KA + L + +
Sbjct: 96 PNPNVFVYNTMISA--VSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---K 150
Query: 126 MIHGYSSKLGLL-FDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKV 184
IH + G L ++ NSL+ Y G+ A KVF +P S+++MI GYAK
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 185 G-DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
G ++ +L+F M+S I PDE +S+
Sbjct: 211 GFSLEALKLYFK------------MVS--------------------DGIEPDEYTVLSL 238
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPL---SIRLSTSLLDMYAKCGNLDLAKRLFDSMPD 300
L C H+ + G VH ++ R R P+ ++ LS +LLDMY KC LAKR FD+M
Sbjct: 239 LVCCGHLSDIRLGKGVHGWIER-RGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKK 297
Query: 301 RDIVCWNAMISGLAMHGDGIGALKLFSEMEKL---------------------------- 332
+D+ WN M+ G GD A +F +M K
Sbjct: 298 KDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYE 357
Query: 333 -----GIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRT 387
+KPD +T +++ + + +G S G + + + ++ + L+D+ +
Sbjct: 358 MTIVEKVKPDRVTMVSLISGAANNGELSHG-RWVHGLVIRLQLKGDAFLSSALIDMYCKC 416
Query: 388 GFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
G E A ++ + T ++ W + ++ HG Q A
Sbjct: 417 GIIERAFMVFKTAT-----EKDVALWTSMITGLAFHGNGQQA 453
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 301 bits (772), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 163/433 (37%), Positives = 249/433 (57%), Gaps = 9/433 (2%)
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHS--LGEMIHGYSSKLGLLFD- 139
NG L F++M G+ P++ T L C S LG+++HGY+ KLGL +
Sbjct: 49 NGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNH 108
Query: 140 IFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPE 199
+ VG ++I MY G AR VFD + ++V+W+ MI GY + G VD A FD+ PE
Sbjct: 109 VMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPE 168
Query: 200 KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWV 259
+D W AMI+G+V+ +E L FR MQ++ + PD ++ L+AC ++GAL G+WV
Sbjct: 169 RDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWV 228
Query: 260 HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDG 319
HRY+ ++R+S SL+D+Y +CG ++ A+++F +M R +V WN++I G A +G+
Sbjct: 229 HRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNA 288
Query: 320 IGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC 379
+L F +M++ G KPD +TF TACS+ G+ EGL+ M Y + P+ EHYGC
Sbjct: 289 HESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGC 348
Query: 380 LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG-QAQLATLAAESLVR 438
LVDL SR G E+A+ +++ + N + + L+AC NHG LA + L
Sbjct: 349 LVDLYSRAGRLEDALKLVQSMPMKPN----EVVIGSLLAACSNHGNNIVLAERLMKHLTD 404
Query: 439 LDNPS-GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEK 497
L+ S YV++SN+YAA G+ ++R MK + K PG SS+EID + F+AG+
Sbjct: 405 LNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDN 464
Query: 498 THPQMDEIHSILE 510
H + I +LE
Sbjct: 465 AHVETTYIREVLE 477
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 133/314 (42%), Gaps = 42/314 (13%)
Query: 28 VFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLN 87
VF D NS + ++ + G + A K+F ++ + +I F+ G
Sbjct: 131 VFDYMEDKNSVTWNTMID--GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQE 188
Query: 88 RTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLI 147
L F M +G+ PD I AL AC L S G +H Y ++ V NSLI
Sbjct: 189 EALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLI 248
Query: 148 AMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGA 207
+YC G + AR+VF + + VSW+ +I G+A G+
Sbjct: 249 DLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNA-------------------- 288
Query: 208 MISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLN--- 264
E L FR MQ PD F L+AC+H+G ++ G+ RY
Sbjct: 289 -----------HESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGL---RYFQIMK 334
Query: 265 -RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR-DIVCWNAMISGLAMHGDGIG- 321
R+ I L+D+Y++ G L+ A +L SMP + + V ++++ + HG+ I
Sbjct: 335 CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVL 394
Query: 322 ALKLFSEMEKLGIK 335
A +L + L +K
Sbjct: 395 AERLMKHLTDLNVK 408
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 301 bits (772), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 283/511 (55%), Gaps = 14/511 (2%)
Query: 11 LLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTV 70
++ K +++ LKQ + + SGL ++ F ++L FC+ +L+YA +F R P
Sbjct: 30 VISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCT-LRLCNLSYARFIFDRFSFPNT 88
Query: 71 CICNTIIKAFLINGNLNRT--LHVFTNML-RNGLSPDNYTIPYALKACAALRDHSLGEMI 127
+ ++ A+ + L+ + F M+ R+ P+++ P LK+ L ++
Sbjct: 89 HLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLV 148
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCV-FGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
H + K G + V +L+ Y + AR++FDE+ + VSW+ M+SGYA+ GD
Sbjct: 149 HTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGD 208
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLM-QLTDIGPDESIFVSILS 245
+ A F++ PE+D W A+++ QN F E + LFR M I P+E V +LS
Sbjct: 209 ISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLS 268
Query: 246 ACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVC 305
ACA G L +H + R L + +S SL+D+Y KCGNL+ A +F + +
Sbjct: 269 ACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTA 328
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKLG---IKPDDITFIAVFTACSYSGMASEGLKLLD 362
WN+MI+ A+HG A+ +F EM KL IKPD ITFI + AC++ G+ S+G D
Sbjct: 329 WNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFD 388
Query: 363 KMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCN 422
M + + +EP+ EHYGCL+DLL R G F+EA+ ++ + ++E + W + L+AC
Sbjct: 389 LMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMK---ADEAI-WGSLLNACKI 444
Query: 423 HGQAQLATLAAESLVRLDNPSGLYV-LISNLYAASGRHADVRRVRDVMKNKRVDKAPGCS 481
HG LA +A ++LV L+ +G YV +++NLY G + RR R ++K++ K PG S
Sbjct: 445 HGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWS 504
Query: 482 SVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
+EID V +F + +K+HP+ +EI+ IL+ +
Sbjct: 505 RIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/540 (31%), Positives = 284/540 (52%), Gaps = 43/540 (7%)
Query: 11 LLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTV 70
++++C K L+ A A + + L+ + +++ + C+ + L A ++Q P V
Sbjct: 779 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKR--LDLAVSTMTQMQEPNV 836
Query: 71 CICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACA-ALRDHSLGEMIHG 129
+ N + K F+ + R+L ++ MLR+ +SP +YT +KA + A R GE +
Sbjct: 837 FVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASR---FGESLQA 893
Query: 130 YSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKV----- 184
+ K G F + + +LI Y G + ARKVFDE+P ++W+ M+S Y +V
Sbjct: 894 HIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDS 953
Query: 185 --------------------------GDVDLARLFFDETPEKDKGIWGAMISGYVQNNCF 218
G+++ A F++ P KD W MI GY QN +
Sbjct: 954 ANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRY 1013
Query: 219 KEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSL 278
+E + +F M I PDE +++SACAH+G L+ G VH Y + L + + ++L
Sbjct: 1014 REAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSAL 1073
Query: 279 LDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDD 338
+DMY+KCG+L+ A +F ++P +++ CWN++I GLA HG ALK+F++ME +KP+
Sbjct: 1074 VDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNA 1133
Query: 339 ITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIR 398
+TF++VFTAC+++G+ EG ++ M Y++ EHYG +V L S+ G EA+ +I
Sbjct: 1134 VTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIG 1193
Query: 399 RITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDN-PSGLYVLISNLYAASG 457
+ N + W A L C H +A +A L+ L+ SG Y L+ ++YA
Sbjct: 1194 NMEFEPNA----VIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQN 1249
Query: 458 RHADVRRVRDVMKNKRVDK-APGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
R DV +R M+ ++K PG SS+ ID F A +K+H DE+ +L++++ Q+
Sbjct: 1250 RWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQM 1309
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/495 (34%), Positives = 270/495 (54%), Gaps = 54/495 (10%)
Query: 2 SSCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKV 61
+S + RCL L+ KCK+++ LKQ HAQ+ T GL ++++ LS++L S L+YA +
Sbjct: 6 TSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSS---TVCLSYALSI 62
Query: 62 FQRIQHPTVCICNTIIKAFLINGNLNRTLHVFT------NMLRNGLSPDNYTIPYALKAC 115
++I +P+V + NT+I + + N N +T F+ + N + P+ +T P KA
Sbjct: 63 LRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKAS 122
Query: 116 A-ALRDHSLGEMIHGYSSKL--GLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
+ H G +H + K + D FV +L+ Y
Sbjct: 123 GFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFY---------------------- 160
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQN---NCFKEGLYLFRLMQ 229
A G + AR F+ E D W +++ Y + + +E L LF MQ
Sbjct: 161 ---------ANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ 211
Query: 230 LTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLD 289
+ P+E V+++ +CA++G GVW H Y+ + L L+ + TSL+D+Y+KCG L
Sbjct: 212 ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLS 268
Query: 290 LAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
A+++FD M RD+ C+NAMI GLA+HG G ++L+ + G+ PD TF+ +ACS
Sbjct: 269 FARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACS 328
Query: 350 YSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEE 409
+SG+ EGL++ + M +VY +EPK EHYGCLVDLL R+G EEA I+++ N +
Sbjct: 329 HSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNAT-- 386
Query: 410 TLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDV 468
WR+FL + HG + +A + L+ L+ SG YVL+SN+YA R DV + R++
Sbjct: 387 --LWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTREL 444
Query: 469 MKNKRVDKAPGCSSV 483
MK+ RV+K+PG S++
Sbjct: 445 MKDHRVNKSPGISTL 459
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 171/475 (36%), Positives = 271/475 (57%), Gaps = 18/475 (3%)
Query: 55 LTYACKVFQRIQHPTV--CICNTIIKAFLIN---GNLNRTLHVFTNMLRNGLSPDNYTIP 109
+ YA +F I+H + + N II+A + N + + V+ M + +SPD +T P
Sbjct: 8 IAYANPIFH-IRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFP 66
Query: 110 YALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL 169
+ L + LG+ H GL D FV SL+ MY GD+ +A++VFD+ S
Sbjct: 67 FLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK 126
Query: 170 SAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQ 229
+W+ +++ YAK G +D AR FDE PE++ W +I+GYV +KE L LFR MQ
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 230 LTD-----IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAK 284
L + P+E ++LSAC +GAL+ G WVH Y+++ + + I L T+L+DMYAK
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAK 246
Query: 285 CGNLDLAKRLFDSM-PDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKL-GIKPDDITFI 342
CG+L+ AKR+F+++ +D+ ++AMI LAM+G +LFSEM I P+ +TF+
Sbjct: 247 CGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFV 306
Query: 343 AVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITN 402
+ AC + G+ +EG M + + P +HYGC+VDL R+G +EA I
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFI----A 362
Query: 403 SNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDN-PSGLYVLISNLYAASGRHAD 461
S + L W + LS G + A + L+ LD SG YVL+SN+YA +GR +
Sbjct: 363 SMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWME 422
Query: 462 VRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
V+ +R M+ K ++K PGCS VE++GVV EF+ G+++ + + I+++L+++ +L
Sbjct: 423 VKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRL 477
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 263/497 (52%), Gaps = 40/497 (8%)
Query: 23 QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLI 82
Q HA + GLD++ F + +++ + G +A ++F + V +I F+
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLIS--GYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVR 181
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLF-DIF 141
NG+ + + F M + G++ + T+ LKA + D G +HG + G + D+F
Sbjct: 182 NGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
+G+SL+ MY K D A+ FDE P ++
Sbjct: 242 IGSSLVDMY-------------------------------GKCSCYDDAQKVFDEMPSRN 270
Query: 202 KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHR 261
W A+I+GYVQ+ CF +G+ +F M +D+ P+E S+LSACAH+GAL G VH
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHC 330
Query: 262 YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG 321
Y+ + + ++ T+L+D+Y KCG L+ A +F+ + ++++ W AMI+G A HG
Sbjct: 331 YMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARD 390
Query: 322 ALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLV 381
A LF M + P+++TF+AV +AC++ G+ EG +L M +NMEPK++HY C+V
Sbjct: 391 AFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMV 450
Query: 382 DLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD- 440
DL R G EEA +I R+ + W A +C H +L AA +++L
Sbjct: 451 DLFGRKGLLEEAKALIERMPMEPT----NVVWGALFGSCLLHKDYELGKYAASRVIKLQP 506
Query: 441 NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHP 500
+ SG Y L++NLY+ S +V RVR MK+++V K+PG S +E+ G + EFIA + P
Sbjct: 507 SHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKP 566
Query: 501 -QMDEIHSILEKMHLQL 516
+ D+++ L+ + +Q+
Sbjct: 567 LESDDLYKTLDTVGVQM 583
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 193/425 (45%), Gaps = 44/425 (10%)
Query: 10 TLLEKCKNMKQLKQAHAQVFTSGL--DNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH 67
TLL+ + LKQ H + TS + LSR+L C YA ++ ++Q
Sbjct: 6 TLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTA-ATQFRYARRLLCQLQT 64
Query: 68 PTVCICNTIIKAFLINGNLNRTLH--VFTNMLRNGLSPDNYTIPYALKACAALRDHSLGE 125
++ + +++I F LNR L + +M RNG+ P +T P LKA LRD + +
Sbjct: 65 LSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ 124
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
H + K GL D FV NSLI+ Y G A ++FD V+W+ MI G+ + G
Sbjct: 125 -FHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILS 245
A ++F E M+ T + +E VS+L
Sbjct: 184 SASEAMVYFVE-------------------------------MKKTGVAANEMTVVSVLK 212
Query: 246 ACAHMGALDTGVWVH-RYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIV 304
A + + G VH YL R+ + + +SL+DMY KC D A+++FD MP R++V
Sbjct: 213 AAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVV 272
Query: 305 CWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKM 364
W A+I+G + +F EM K + P++ T +V +AC++ G G ++ M
Sbjct: 273 TWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYM 332
Query: 365 FSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
++E + L+DL + G EEA+++ R+ N W A ++ HG
Sbjct: 333 IK-NSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKN-----VYTWTAMINGFAAHG 386
Query: 425 QAQLA 429
A+ A
Sbjct: 387 YARDA 391
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 248/466 (53%), Gaps = 12/466 (2%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G++ A +VF + V N++I F NG L VF ML + + PD T+ +
Sbjct: 201 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLF-DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSA 171
ACA+L +G+ +HG K L DI + N+ + MY + AR +FD +P +
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320
Query: 172 VSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
++ + MISGYA ARL F + E++ W A+I+GY QN +E L LF L++
Sbjct: 321 IAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLS------IRLSTSLLDMYAKC 285
+ P F +IL ACA + L G+ H ++ + I + SL+DMY KC
Sbjct: 381 SVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKC 440
Query: 286 GNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVF 345
G ++ +F M +RD V WNAMI G A +G G AL+LF EM + G KPD IT I V
Sbjct: 441 GCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVL 500
Query: 346 TACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNN 405
+AC ++G EG M + + P +HY C+VDLL R GF EEA +I +
Sbjct: 501 SACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPM--- 557
Query: 406 GSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRR 464
+++ W + L+AC H L AE L+ ++ + SG YVL+SN+YA G+ DV
Sbjct: 558 -QPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMN 616
Query: 465 VRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILE 510
VR M+ + V K PGCS ++I G F+ +K+HP+ +IHS+L+
Sbjct: 617 VRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLD 662
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 134/223 (60%)
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
+H K G +IF+ N LI Y G + R+VFD++P + +W+ +++G K+G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
+D A F PE+D+ W +M+SG+ Q++ +E L F +M +E F S+LSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
C+ + ++ GV VH + ++ + + ++L+DMY+KCGN++ A+R+FD M DR++V W
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
N++I+ +G + AL +F M + ++PD++T +V +AC+
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 202/490 (41%), Gaps = 108/490 (22%)
Query: 11 LLEKCKNMK----QLKQAHAQVFTSGLDNNSFALSRVL--------------AFCSHPHQ 52
LL+ C K ++ HA V SG N F +R++ F P +
Sbjct: 25 LLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR 84
Query: 53 ---------------GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNML 97
G L A +F+ + C N+++ F + L F M
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 98 RNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMV 157
+ G + Y+ L AC+ L D + G +H +K L D+++G++L+ MY G++
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204
Query: 158 AARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNC 217
A++VFDE+ + VSW+ ++I+ + QN
Sbjct: 205 DAQRVFDEMGDRNVVSWN-------------------------------SLITCFEQNGP 233
Query: 218 FKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVH-RYLNRARLPLSIRLST 276
E L +F++M + + PDE S++SACA + A+ G VH R + +L I LS
Sbjct: 234 AVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSN 293
Query: 277 SLLDMYAKCGNLDLAKRLFDSMP-------------------------------DRDIVC 305
+ +DMYAKC + A+ +FDSMP +R++V
Sbjct: 294 AFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVS 353
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS-----YSGMASEGLKL 360
WNA+I+G +G+ AL LF +++ + P +F + AC+ + GM + + +
Sbjct: 354 WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH-VHV 412
Query: 361 LDKMFSVYNMEPKSEHYG-CLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSA 419
L F + E G L+D+ + G EE ++ R++ + ++W A +
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME-----RDCVSWNAMIIG 467
Query: 420 CCNHGQAQLA 429
+G A
Sbjct: 468 FAQNGYGNEA 477
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 52/230 (22%)
Query: 236 DESIFVSILSAC--AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKR 293
D S F +L +C + + A+ +VH + ++ I + L+D Y+KCG+L+ ++
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVR-YVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 294 LFD-------------------------------SMPDRDIVCWNAMISGLAMHGDGIGA 322
+FD SMP+RD WN+M+SG A H A
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 323 LKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHY----- 377
L F+ M K G ++ +F +V +ACS GL ++K V+++ KS
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACS-------GLNDMNKGVQVHSLIAKSPFLSDVYI 189
Query: 378 -GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
LVD+ S+ G +A + + + N ++W + ++ +G A
Sbjct: 190 GSALVDMYSKCGNVNDAQRVFDEMGDRN-----VVSWNSLITCFEQNGPA 234
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 268/524 (51%), Gaps = 57/524 (10%)
Query: 6 KRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNS---FALSRVLAFCSHPHQGSLTYACKVF 62
+R +L E C +M QLKQ HA + F ++L S + YA +VF
Sbjct: 49 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSS--FSDVNYAFRVF 106
Query: 63 QRIQHPTVCICNTIIKAFLIN-GNLNRTLHVFTNMLRNG-LSPDNYTIPYALKACAALRD 120
I++ + + NT+I+A + ++ ML G SPD +T P+ LKACA +
Sbjct: 107 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 166
Query: 121 HSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISG 180
S G+ +H K G D++V N LI +Y
Sbjct: 167 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLY------------------------------ 196
Query: 181 YAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIF 240
G +DLAR FDE PE+ W +MI V+ + L LFR MQ + PD
Sbjct: 197 -GSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTM 254
Query: 241 VSILSACAHMGALDTGVWVHRYLNR---ARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDS 297
S+LSACA +G+L G W H +L R + + + + SL++MY KCG+L +A+++F
Sbjct: 255 QSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQG 314
Query: 298 MPDRDIVCWNAMISGLAMHGDGIGALKLFSEM--EKLGIKPDDITFIAVFTACSYSGMAS 355
M RD+ WNAMI G A HG A+ F M ++ ++P+ +TF+ + AC++ G +
Sbjct: 315 MQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVN 374
Query: 356 EGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRA 415
+G + D M Y +EP EHYGC+VDL++R G+ EA+ ++ + + + WR+
Sbjct: 375 KGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMK----PDAVIWRS 430
Query: 416 FLSACCNHGQA-QLATLAAESLV--RLDNPS------GLYVLISNLYAASGRHADVRRVR 466
L ACC G + +L+ A +++ + DN S G YVL+S +YA++ R DV VR
Sbjct: 431 LLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVR 490
Query: 467 DVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILE 510
+M + K PGCSS+EI+G+ EF AG+ +HPQ +I+ L+
Sbjct: 491 KLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLK 534
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 288 bits (737), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 226/381 (59%), Gaps = 8/381 (2%)
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
D+ + N+++ + GDM +AR++FDE+ + ++W+ MI GY + D+D AR FD P
Sbjct: 175 DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQ-LTDIGPDESIFVSILSACAHMGALDTGV 257
E++ W MI GY QN +EG+ LF+ MQ T + PD+ +S+L A + GAL G
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 258 WVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHG 317
W H ++ R +L +++ T++LDMY+KCG ++ AKR+FD MP++ + WNAMI G A++G
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNG 354
Query: 318 DGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHY 377
+ AL LF M + KPD+IT +AV TAC++ G+ EG K M + + K EHY
Sbjct: 355 NARAALDLFVTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHY 412
Query: 378 GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLV 437
GC+VDLL R G +EA +I + NG + +FLSAC + + A + V
Sbjct: 413 GCMVDLLGRAGSLKEAEDLITNMPFEPNG----IILSSFLSACGQYKDIERAERILKKAV 468
Query: 438 RLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGE 496
L+ G YVL+ NLYAA R D V++VM+ + K GCS +EI+ +V EFI+G+
Sbjct: 469 ELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGD 528
Query: 497 KTHPQMDEIHSILEKMHLQLD 517
THP IH +L + + ++
Sbjct: 529 TTHPHRRSIHLVLGDLLMHMN 549
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 177/387 (45%), Gaps = 65/387 (16%)
Query: 55 LTYACKVF-QRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNG-LSPDNYTIPYAL 112
+ YA K+F QR Q + N++IKA+L + ++ ++ + +PDN+T
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
K+C+ G +H + G D++V ++ MY FG M AR FDE+P S V
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPE-KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
SW+ +ISGY + G++DLA FD+ P KD I+ AM+ G+V++ LF
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLF------ 199
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
DE ++++ W T+++ Y ++D A
Sbjct: 200 ----DEMTHKTVIT------------W-----------------TTMIHGYCNIKDIDAA 226
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEME-KLGIKPDDITFIAVFTACSY 350
++LFD+MP+R++V WN MI G + ++LF EM+ + PDD+T ++V A S
Sbjct: 227 RKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISD 286
Query: 351 SGMASEG--------LKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITN 402
+G S G K LDK V ++D+ S+ G E+A I +
Sbjct: 287 TGALSLGEWCHCFVQRKKLDKKVKVCT---------AILDMYSKCGEIEKAKRIFDEMP- 336
Query: 403 SNNGSEETLAWRAFLSACCNHGQAQLA 429
++ +W A + +G A+ A
Sbjct: 337 ----EKQVASWNAMIHGYALNGNARAA 359
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 7/191 (3%)
Query: 176 LMISGYAKVGDVDLARLFFDETPEKDKG-IWGAMISGYVQNNCFKEGLYLFR-LMQLTDI 233
L+IS A VG + AR FD+ P++D + +MI Y++ + + L+R L + T
Sbjct: 17 LVISASA-VG-IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCF 74
Query: 234 GPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKR 293
PD F ++ +C+ + G+ +H + R + +ST ++DMYAK G + A+
Sbjct: 75 APDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARN 134
Query: 294 LFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGM 353
FD MP R V W A+ISG G+ A KLF +M + D + + A+ SG
Sbjct: 135 AFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFVKSGD 191
Query: 354 ASEGLKLLDKM 364
+ +L D+M
Sbjct: 192 MTSARRLFDEM 202
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 103/244 (42%), Gaps = 35/244 (14%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNM-LRNGLSPDNYTIPYALKACA 116
A K+F + + NT+I + N + +F M L PD+ TI L A +
Sbjct: 226 ARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAIS 285
Query: 117 ALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSL 176
SLGE H + + L + V +++ MY G++ A+++FDE+P SW+
Sbjct: 286 DTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNA 345
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPD 236
MI GYA G+ + L LF M + + PD
Sbjct: 346 MIHGYALNGNA-------------------------------RAALDLFVTMMIEE-KPD 373
Query: 237 ESIFVSILSACAHMGALDTG-VWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLF 295
E +++++AC H G ++ G W H + L I ++D+ + G+L A+ L
Sbjct: 374 EITMLAVITACNHGGLVEEGRKWFH-VMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLI 432
Query: 296 DSMP 299
+MP
Sbjct: 433 TNMP 436
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 273/500 (54%), Gaps = 16/500 (3%)
Query: 18 MKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTII 77
M +KQ HA +G+D L R+L +L YA K+F Q+ + N +I
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLLI------PNLVYARKLFDHHQNSCTFLYNKLI 54
Query: 78 KAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLL 137
+A+ ++ + ++ ++ + +GL P ++T + A A+ ++H + G
Sbjct: 55 QAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 114
Query: 138 FDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDET 197
D F +LI Y G + AR+VFDE+ W+ MI+GY + GD+ A FD
Sbjct: 115 SDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 198 PEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQL-TDIGPDESIFVSILSACAHMGALDTG 256
P K+ W +ISG+ QN + E L +F M+ + P+ VS+L ACA++G L+ G
Sbjct: 175 PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIG 234
Query: 257 VWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD-RDIVCWNAMISGLAM 315
+ Y +I + + ++MY+KCG +D+AKRLF+ + + R++ WN+MI LA
Sbjct: 235 RRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 316 HGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSE 375
HG AL LF++M + G KPD +TF+ + AC + GM +G +L M V+ + PK E
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 354
Query: 376 HYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAES 435
HYGC++DLL R G +EA +I+ + + + W L AC HG ++A +A+E+
Sbjct: 355 HYGCMIDLLGRVGKLQEAYDLIKTMPM----KPDAVVWGTLLGACSFHGNVEIAEIASEA 410
Query: 436 LVRLD--NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSS-VEIDGVVMEF 492
L +L+ NP G V++SN+YAA+ + V R+R +MK + + KA G S VE+ V +F
Sbjct: 411 LFKLEPTNP-GNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKF 469
Query: 493 IAGEKTHPQMDEIHSILEKM 512
+K+HP+ EI+ +LE++
Sbjct: 470 TVEDKSHPRSYEIYQVLEEI 489
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 285 bits (728), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 171/580 (29%), Positives = 290/580 (50%), Gaps = 80/580 (13%)
Query: 10 TLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPT 69
+L++ + QLKQ HA++ GL + F +++++ S G +T+A +VF + P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSS--FGDITFARQVFDDLPRPQ 83
Query: 70 VCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHG 129
+ N II+ + N + L +++NM +SPD++T P+ LKAC+ L +G +H
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 130 YSSKLGLLFD----------------------IFVG-----------NSLIAMYCVFGDM 156
+LG D +F G ++++ Y G+
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 157 VAARKVFDEIPSLSA-VSWSLMIS------------------------------------ 179
+ A ++F ++ + W ++S
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 180 --GYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDE 237
YAK G V A++ FD+ + +W AMISGY +N +E + +F M D+ PD
Sbjct: 264 NTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDT 323
Query: 238 SIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDS 297
S +SACA +G+L+ ++ Y+ R+ + +S++L+DM+AKCG+++ A+ +FD
Sbjct: 324 ISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR 383
Query: 298 MPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEG 357
DRD+V W+AMI G +HG A+ L+ ME+ G+ P+D+TF+ + AC++SGM EG
Sbjct: 384 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Query: 358 LKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFL 417
++M + + + P+ +HY C++DLL R G ++A +I+ + W A L
Sbjct: 444 WWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG----VTVWGALL 498
Query: 418 SACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDK 476
SAC H +L AA+ L +D + +G YV +SNLYAA+ V VR MK K ++K
Sbjct: 499 SACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNK 558
Query: 477 APGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
GCS VE+ G + F G+K+HP+ +EI +E + +L
Sbjct: 559 DVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRL 598
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/486 (34%), Positives = 263/486 (54%), Gaps = 19/486 (3%)
Query: 6 KRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLT---YACKVF 62
++ L LL +L + HA + L ++ L+ ++ C GSL+ YA +VF
Sbjct: 5 RKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISIC-----GSLSNSDYANRVF 59
Query: 63 QRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHS 122
IQ+P V + N +IK + + G +L F++M G+ D YT LK+C++L D
Sbjct: 60 SHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLR 119
Query: 123 LGEMIHGYSSKLGL--LFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISG 180
G+ +HG + G L I +G ++ +Y G M A+KVFDE+ + V W+LMI G
Sbjct: 120 FGKCVHGELIRTGFHRLGKIRIG--VVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRG 177
Query: 181 YAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIF 240
+ GDV+ F + E+ W +MIS + +E L LF M PDE+
Sbjct: 178 FCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATV 237
Query: 241 VSILSACAHMGALDTGVWVHRYLNRARLPLS-IRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
V++L A +G LDTG W+H + L I + +L+D Y K G+L+ A +F M
Sbjct: 238 VTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ 297
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEM-EKLGIKPDDITFIAVFTACSYSGMASEGL 358
R++V WN +ISG A++G G + LF M E+ + P++ TF+ V CSY+G G
Sbjct: 298 RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGE 357
Query: 359 KLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLS 418
+L M + +E ++EHYG +VDL+SR+G EA ++ + + N + W + LS
Sbjct: 358 ELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAA----MWGSLLS 413
Query: 419 ACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKA 477
AC +HG +LA +AA LV+++ SG YVL+SNLYA GR DV +VR +MK R+ K+
Sbjct: 414 ACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKS 473
Query: 478 PGCSSV 483
G S++
Sbjct: 474 TGQSTI 479
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 282 bits (721), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/514 (31%), Positives = 270/514 (52%), Gaps = 9/514 (1%)
Query: 1 MSSCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACK 60
++S S +++ KC + L + +VF L+ + + + ++ + G +
Sbjct: 183 ITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMT--GYVKNGYFDLGEE 240
Query: 61 VFQRIQHPTVCIC-NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALR 119
+ + + + N +I ++ G L + M+ +G+ D +T P ++ACA
Sbjct: 241 LLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAG 300
Query: 120 DHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMIS 179
LG+ +H Y + F NSL+++Y G AR +F+++P+ VSW+ ++S
Sbjct: 301 LLQLGKQVHAYVLRRED-FSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLS 359
Query: 180 GYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
GY G + A+L F E EK+ W MISG +N +EGL LF M+ P +
Sbjct: 360 GYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYA 419
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
F + +CA +GA G H L + S+ +L+ MYAKCG ++ A+++F +MP
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK 359
D V WNA+I+ L HG G A+ ++ EM K GI+PD IT + V TACS++G+ +G K
Sbjct: 480 CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
Query: 360 LLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSA 419
D M +VY + P ++HY L+DLL R+G F +A +I + W A LS
Sbjct: 540 YFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAE----IWEALLSG 595
Query: 420 CCNHGQAQLATLAAESLVRL-DNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAP 478
C HG +L +AA+ L L G Y+L+SN++AA+G+ +V RVR +M+++ V K
Sbjct: 596 CRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEV 655
Query: 479 GCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
CS +E++ V F+ + +HP+ + ++ L+ +
Sbjct: 656 ACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDL 689
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 195/441 (44%), Gaps = 52/441 (11%)
Query: 40 LSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTI-----IKAFLINGNLNRTLHVFT 94
++R + G +T A VF++ VC+ +T+ I F N + +++F
Sbjct: 81 IARTTMVSGYCASGDITLARGVFEK---APVCMRDTVMYNAMITGFSHNNDGYSAINLFC 137
Query: 95 NMLRNGLSPDNYTIPYALKACAALR-DHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVF 153
M G PDN+T L A + D H + K G + V N+L+++Y
Sbjct: 138 KMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKC 197
Query: 154 GD----MVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGI-WGAM 208
+ +ARKVFDEI SW+ M++GY K G DL + + K + + AM
Sbjct: 198 ASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAM 257
Query: 209 ISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARL 268
ISGYV ++E L + R M + I DE + S++ ACA G L G VH Y+ R R
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR-RE 316
Query: 269 PLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNA-------------------- 308
S SL+ +Y KCG D A+ +F+ MP +D+V WNA
Sbjct: 317 DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 309 -----------MISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEG 357
MISGLA +G G LKLFS M++ G +P D F +C+ G G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 358 LKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFL 417
+ ++ + + L+ + ++ G EEA + R + ++++W A +
Sbjct: 437 QQYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMP-----CLDSVSWNALI 490
Query: 418 SACCNHGQAQLATLAAESLVR 438
+A HG A E +++
Sbjct: 491 AALGQHGHGAEAVDVYEEMLK 511
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 193/440 (43%), Gaps = 58/440 (13%)
Query: 112 LKACAALRDHSL--GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL 169
L+ C LR SL +HG G + N LI +YC ++ AR++FDEI
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 170 SAVSWSLMISGYAKVGDVDLARLFFDETP--EKDKGIWGAMISGYVQNNCFKEGLYLFRL 227
++ + M+SGY GD+ LAR F++ P +D ++ AMI+G+ NN + LF
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 228 MQLTDIGPDESIFVSILSACA------------HMGALDTG---------VWVHRY---- 262
M+ PD F S+L+ A H AL +G V Y
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 263 -----LNRAR------LPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR-DIVCWNAMI 310
L+ AR L R T+++ Y K G DL + L + M D +V +NAMI
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 311 SGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNM 370
SG G AL++ M GI+ D+ T+ +V AC A+ GL L K Y +
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRAC-----ATAGLLQLGKQVHAYVL 313
Query: 371 --EPKSEHY-GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
E S H+ LV L + G F+EA I ++ +++ ++W A LS + G
Sbjct: 314 RREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP-----AKDLVSWNALLSGYVSSGHIG 368
Query: 428 LATLAAESLVRLDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEID- 486
A L + + + N ++IS L A +G + ++ MK + + S I
Sbjct: 369 EAKLIFKEM-KEKNILSWMIMISGL-AENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 487 -GVVMEFIAGEKTHPQMDEI 505
V+ + G++ H Q+ +I
Sbjct: 427 CAVLGAYCNGQQYHAQLLKI 446
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/502 (31%), Positives = 265/502 (52%), Gaps = 46/502 (9%)
Query: 18 MKQLKQAHAQVFTSGLDNNSFALSRVLAF-CSHPHQGSLTYACKVFQRIQHPTVCICNTI 76
+KQL+Q HA + +G + L++++ CS ++ Y +F + P + N++
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACS---ARAIAYTHLLFLSVPLPDDFLFNSV 78
Query: 77 IKAFLINGNLNRTLH---VFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
IK+ L LH + ML + +SP NYT +K+CA L +G+ +H ++
Sbjct: 79 IKS---TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVV 135
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
G D +V +L+ Y +K GD++ AR
Sbjct: 136 SGFGLDTYVQAALVTFY-------------------------------SKCGDMEGARQV 164
Query: 194 FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGAL 253
FD PEK W +++SG+ QN E + +F M+ + PD + FVS+LSACA GA+
Sbjct: 165 FDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAV 224
Query: 254 DTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGL 313
G WVH+Y+ L L+++L T+L+++Y++CG++ A+ +FD M + ++ W AMIS
Sbjct: 225 SLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAY 284
Query: 314 AMHGDGIGALKLFSEME-KLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEP 372
HG G A++LF++ME G P+++TF+AV +AC+++G+ EG + +M Y + P
Sbjct: 285 GTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIP 344
Query: 373 KSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLA 432
EH+ C+VD+L R GF +EA I ++ + + L W A L AC H L
Sbjct: 345 GVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPAL-WTAMLGACKMHRNYDLGVEI 403
Query: 433 AESLVRL--DNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVM 490
A+ L+ L DNP G +V++SN+YA SG+ +V +RD M + K G S +E++
Sbjct: 404 AKRLIALEPDNP-GHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTY 462
Query: 491 EFIAGEKTHPQMDEIHSILEKM 512
F G+++H + EI+ LE +
Sbjct: 463 MFSMGDESHQETGEIYRYLETL 484
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 152/339 (44%), Gaps = 46/339 (13%)
Query: 10 TLLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
++++ C ++ L K H SG +++ + ++ F S G + A +VF R+
Sbjct: 112 SVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKC--GDMEGARQVFDRMP 169
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
++ N+++ F NG + + VF M +G PD+ T L ACA SLG
Sbjct: 170 EKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSW 229
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
+H Y GL ++ +G +LI +Y GD+ AR+VFD++ + +W+ MIS Y
Sbjct: 230 VHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYG---- 285
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG--PDESIFVSIL 244
GY Q + + LF M+ D G P+ FV++L
Sbjct: 286 ----------------------THGYGQ-----QAVELFNKME-DDCGPIPNNVTFVAVL 317
Query: 245 SACAHMGALDTGVWVHRYLNRA-RLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI 303
SACAH G ++ G V++ + ++ RL + ++DM + G LD A + +
Sbjct: 318 SACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGK 377
Query: 304 VC----WNAMISGLAMHGDGIGALKLFSEMEKLGIKPDD 338
W AM+ MH + +++ + + ++PD+
Sbjct: 378 ATAPALWTAMLGACKMHRNYDLGVEIAKRL--IALEPDN 414
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 219/357 (61%), Gaps = 8/357 (2%)
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
D+ NS+I Y G + A+ +FD +P V+W+ MI GYAK+G V A+ FD+ P
Sbjct: 251 DLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQL-TDIGPDESIFVSILSACAHMGALDTGV 257
+D + +M++GYVQN E L +F M+ + + PD++ V +L A A +G L +
Sbjct: 311 HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAI 370
Query: 258 WVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHG 317
+H Y+ + L +L +L+DMY+KCG++ A +F+ + ++ I WNAMI GLA+HG
Sbjct: 371 DMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHG 430
Query: 318 DGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHY 377
G A + ++E+L +KPDDITF+ V ACS+SG+ EGL + M + +EP+ +HY
Sbjct: 431 LGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 490
Query: 378 GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLV 437
GC+VD+LSR+G E A +I + N + WR FL+AC +H + + L A+ L+
Sbjct: 491 GCMVDILSRSGSIELAKNLIEEMPVEPN----DVIWRTFLTACSHHKEFETGELVAKHLI 546
Query: 438 RLD--NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEF 492
NPS YVL+SN+YA+ G DVRRVR +MK ++++K PGCS +E+DG V EF
Sbjct: 547 LQAGYNPSS-YVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 213/440 (48%), Gaps = 39/440 (8%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSR-VLAFCS--HPHQGSLT-------YA 58
+ +L CK + Q H ++ +G+ NS +R VLAF S P+ +
Sbjct: 16 IHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHV 75
Query: 59 CKV-FQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
C F ++ P + N +IK+ + + L + ML NG+S D +++ LKAC+
Sbjct: 76 CSFSFGEVEDPF--LWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSR 133
Query: 118 LRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLM 177
L G IHG+ K GL D+F+ N LI +Y G + +R++FD +P +VS++ M
Sbjct: 134 LGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSM 193
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGI--WGAMISGYVQNNCFKEGLYLFRLMQLTDIGP 235
I GY K G + AR FD P + K + W +MISGY Q + +G+ + + D+
Sbjct: 194 IDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTS---DGVDIASKL-FADMPE 249
Query: 236 DESI-FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRL 294
+ I + S++ G ++ + + R + +++D YAK G + AK L
Sbjct: 250 KDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DVVTWATMIDGYAKLGFVHHAKTL 305
Query: 295 FDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLG-IKPDDITFIAVFTACSYSGM 353
FD MP RD+V +N+M++G + + AL++FS+MEK + PDD T + V A + G
Sbjct: 306 FDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGR 365
Query: 354 ASEGLKLLDKMFSVYNMEPKSEHYG----CLVDLLSRTGFFEEAMVIIRRITNSNNGSEE 409
S+ + + +Y +E + G L+D+ S+ G + AM++ I N +
Sbjct: 366 LSKAIDM-----HLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDH-- 418
Query: 410 TLAWRAFLSACCNHGQAQLA 429
W A + HG + A
Sbjct: 419 ---WNAMIGGLAIHGLGESA 435
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 248/464 (53%), Gaps = 8/464 (1%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G L A VF + V NT++ + +GNL+ L + R+G+ + ++ L
Sbjct: 127 GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLL 186
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
AC R L HG G L ++ + S+I Y G M +A++ FDE+
Sbjct: 187 TACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH 246
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
W+ +ISGYAK+GD++ A F E PEK+ W A+I+GYV+ L LFR M
Sbjct: 247 IWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALG 306
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
+ P++ F S L A A + +L G +H Y+ R + + + +SL+DMY+K G+L+ ++
Sbjct: 307 VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASE 366
Query: 293 RLFDSMPDR-DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYS 351
R+F D+ D V WN MIS LA HG G AL++ +M K ++P+ T + + ACS+S
Sbjct: 367 RVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHS 426
Query: 352 GMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETL 411
G+ EGL+ + M + + P EHY CL+DLL R G F+E M R+I ++ +
Sbjct: 427 GLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELM---RKIEEMPFEPDKHI 483
Query: 412 AWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMK 470
W A L C HG +L AA+ L++LD S Y+L+S++YA G+ V ++R VMK
Sbjct: 484 -WNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMK 542
Query: 471 NKRVDKAPGCSSVEIDGVVMEFIA--GEKTHPQMDEIHSILEKM 512
+RV+K S +EI+ V F G H + +EI+ IL +
Sbjct: 543 KRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 180/419 (42%), Gaps = 37/419 (8%)
Query: 70 VCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHG 129
+C+ + + L++ + ++ + G+ + L+ C + G+ IH
Sbjct: 11 ICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHR 70
Query: 130 YSSKLGLLF-DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVD 188
+ G + + N LI MY G + A KVFD++ + SW+ M+SGY K G +
Sbjct: 71 HLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLV 130
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
AR+ FD PE+D W M+ GY Q+ E L+ ++ + + I +E F +L+AC
Sbjct: 131 RARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACV 190
Query: 249 HMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFD------------ 296
L H + A ++ LS S++D YAKCG ++ AKR FD
Sbjct: 191 KSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTT 250
Query: 297 -------------------SMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPD 337
MP+++ V W A+I+G G G AL LF +M LG+KP+
Sbjct: 251 LISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPE 310
Query: 338 DITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVII 397
TF + A + G ++ M N+ P + L+D+ S++G E + +
Sbjct: 311 QFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASERVF 369
Query: 398 RRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAAS 456
R + ++ + W +SA HG A + +++ L+ L A S
Sbjct: 370 RICDDKHD----CVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACS 424
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 137/356 (38%), Gaps = 64/356 (17%)
Query: 11 LLEKCKNMKQL---KQAHAQVFTSG-LDNNSFALSRVLAFCS------------------ 48
LL C +QL +QAH QV +G L N + S + A+
Sbjct: 185 LLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD 244
Query: 49 ----------HPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLR 98
+ G + A K+F + +I ++ G+ NR L +F M+
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA 304
Query: 99 NGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVA 158
G+ P+ +T L A A++ G+ IHGY + + + V +SLI MY G + A
Sbjct: 305 LGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEA 364
Query: 159 ARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCF 218
+ +VF R+ D + D W MIS Q+
Sbjct: 365 SERVF---------------------------RICDD---KHDCVFWNTMISALAQHGLG 394
Query: 219 KEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGV-WVHRYLNRARLPLSIRLSTS 277
+ L + M + P+ + V IL+AC+H G ++ G+ W + +
Sbjct: 395 HKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYAC 454
Query: 278 LLDMYAKCGNLDLAKRLFDSMP-DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKL 332
L+D+ + G R + MP + D WNA++ +HG+ K E+ KL
Sbjct: 455 LIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKL 510
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 254/524 (48%), Gaps = 73/524 (13%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSP-DNYTIPYALKACA 116
A KVF R+ + NT+I + N ++ VF +++ + D T+ L A A
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
Query: 117 ALRDHSLGEMIHGYSSKLG-------------------------LLF------DIFVGNS 145
L++ LG IH ++K G LF DI N+
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNA 292
Query: 146 LIAMYCVFGDMVAARKVFDEI------------PSLSAVSWSLMI--------------- 178
+I Y G+ + +F E+ SL VS LM+
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLS 352
Query: 179 ---------SGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQ 229
+ Y+K+ +++ AR FDE+PEK W AMISGY QN ++ + LFR MQ
Sbjct: 353 HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412
Query: 230 LTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLD 289
++ P+ ILSACA +GAL G WVH + SI +ST+L+ MYAKCG++
Sbjct: 413 KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIA 472
Query: 290 LAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
A+RLFD M ++ V WN MISG +HG G AL +F EM GI P +TF+ V ACS
Sbjct: 473 EARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACS 532
Query: 350 YSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEE 409
++G+ EG ++ + M Y EP +HY C+VD+L R G + A+ I ++ S
Sbjct: 533 HAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSS-- 590
Query: 410 TLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDV 468
W L AC H LA +E L LD + G +VL+SN+++A + VR
Sbjct: 591 --VWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQT 648
Query: 469 MKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
K +++ KAPG + +EI F +G+++HPQ+ EI+ LEK+
Sbjct: 649 AKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKL 692
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 211/495 (42%), Gaps = 65/495 (13%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
L ++ ++ L Q HAQ+ G N+ L+++ S G++ YA +F +Q P
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSD--LGAIYYARDIFLSVQRP 81
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRN-GLSPDNYTIPYALKACAALRDHSLGEMI 127
V + N +++ F +N + + +L VF ++ ++ L P++ T +A+ A + RD G +I
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
HG + G ++ +G++++ MY F + ARKVFD +P + W+ MISGY K
Sbjct: 142 HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK---- 197
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFR-LMQLTDIGPDESIFVSILSA 246
N + E + +FR L+ + D + + IL A
Sbjct: 198 ---------------------------NEMYVESIQVFRDLINESCTRLDTTTLLDILPA 230
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
A + L G+ +H + + T + +Y+KCG + + LF DIV +
Sbjct: 231 VAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAY 290
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFI-------------AVFTACSYSGM 353
NAMI G +G+ +L LF E+ G + T + A+ C S
Sbjct: 291 NAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNF 350
Query: 354 ASEG------------LKLLDKMFSVYNMEPKSE--HYGCLVDLLSRTGFFEEAMVIIRR 399
S L ++ +++ P+ + ++ ++ G E+A+ + R
Sbjct: 351 LSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFRE 410
Query: 400 ITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLIS--NLYAASG 457
+ S S + LSAC G L + + D S +YV + +YA G
Sbjct: 411 MQKS-EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469
Query: 458 RHADVRRVRDVMKNK 472
A+ RR+ D+M K
Sbjct: 470 SIAEARRLFDLMTKK 484
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 274 bits (701), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 175/525 (33%), Positives = 272/525 (51%), Gaps = 48/525 (9%)
Query: 2 SSCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNS----FALSRVLAFCSHPHQGSLTY 57
SS L+L+ L+Q HA + + L NS LSR LA P + Y
Sbjct: 8 SSGDDHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSR-LALSLIPRD--INY 64
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDN-YTIPYALKACA 116
+C+VF + +PT+ CNT+I+AF ++ +F ++ RN P N + +ALK C
Sbjct: 65 SCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCI 124
Query: 117 ALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSL 176
D G IHG G L D + +L+ +Y + A KVFDEI
Sbjct: 125 KSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEI---------- 174
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG-- 234
P++D W + S Y++N ++ L LF M+ G
Sbjct: 175 ---------------------PKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCV 213
Query: 235 -PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKR 293
PD + L ACA++GALD G VH +++ L ++ LS +L+ MY++CG++D A +
Sbjct: 214 KPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQ 273
Query: 294 LFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGM 353
+F M +R++V W A+ISGLAM+G G A++ F+EM K GI P++ T + +ACS+SG+
Sbjct: 274 VFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGL 333
Query: 354 ASEGLKLLDKMFS-VYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLA 412
+EG+ D+M S + ++P HYGC+VDLL R ++A +I+ S ++
Sbjct: 334 VAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIK----SMEMKPDSTI 389
Query: 413 WRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKN 471
WR L AC HG +L L+ L +G YVL+ N Y+ G+ V +R +MK
Sbjct: 390 WRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKE 449
Query: 472 KRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
KR+ PGCS++E+ G V EFI + +HP+ +EI+ +L +++ QL
Sbjct: 450 KRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQL 494
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/459 (32%), Positives = 240/459 (52%), Gaps = 36/459 (7%)
Query: 60 KVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALR 119
+VF+ + V NTII + +G L + M L PD++T+ L +
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 120 DHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMIS 179
D G+ IHGY + G+ D+++G+SL+ MY + + +VF + +SW+
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWN---- 312
Query: 180 GYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
++++GYVQN + E L LFR M + P
Sbjct: 313 ---------------------------SLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
F S++ ACAH+ L G +H Y+ R +I ++++L+DMY+KCGN+ A+++FD M
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK 359
D V W A+I G A+HG G A+ LF EM++ G+KP+ + F+AV TACS+ G+ E
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 465
Query: 360 LLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSA 419
+ M VY + + EHY + DLL R G EEA I ++ GS W LS+
Sbjct: 466 YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGS----VWSTLLSS 521
Query: 420 CCNHGQAQLATLAAESLVRLDNPS-GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAP 478
C H +LA AE + +D+ + G YVL+ N+YA++GR ++ ++R M+ K + K P
Sbjct: 522 CSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKP 581
Query: 479 GCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQLD 517
CS +E+ F++G+++HP MD+I+ L+ + Q++
Sbjct: 582 ACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQME 620
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 214/451 (47%), Gaps = 27/451 (5%)
Query: 1 MSSCSKRCLTLLE---KCKNMKQLKQAHAQ-VFTSGLDNNSFALSRVLAFCSHPHQGSLT 56
MSS TL++ + K+ Q KQ HAQ + T L + S ++ + + L
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI----VISIYTNLKLLH 56
Query: 57 YACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACA 116
A +F+ ++ P V ++I+ F ++ L F M +G PD+ P LK+C
Sbjct: 57 EALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCT 116
Query: 117 ALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVF---GDMVAARKVFDEIPSLSAVS 173
+ D GE +HG+ +LG+ D++ GN+L+ MY G ++ VFDE+P ++ S
Sbjct: 117 MMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNS 176
Query: 174 WSLMISGYAKVGD--VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
+ + +D R F+ P KD + +I+GY Q+ +++ L + R M T
Sbjct: 177 GDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTT 236
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
D+ PD S+L + + G +H Y+ R + + + +SL+DMYAK ++ +
Sbjct: 237 DLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 296
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYS 351
+R+F + RD + WN++++G +G AL+LF +M +KP + F +V AC++
Sbjct: 297 ERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL 356
Query: 352 GMASEGLKL----LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGS 407
G +L L F N+ S LVD+ S+ G + A R+I + N
Sbjct: 357 ATLHLGKQLHGYVLRGGFGS-NIFIAS----ALVDMYSKCGNIKAA----RKIFDRMNVL 407
Query: 408 EETLAWRAFLSACCNHGQAQLATLAAESLVR 438
+E ++W A + HG A E + R
Sbjct: 408 DE-VSWTAIIMGHALHGHGHEAVSLFEEMKR 437
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 248/496 (50%), Gaps = 42/496 (8%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLA-FCSHPHQGSLTYACKVFQR-IQHPTVCIC-NTIIK 78
+Q H V G + F L+ +++ +C G + A KVF+ Q + +C N +I
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCK---CGLVADARKVFEENPQSSQLSVCYNALIS 129
Query: 79 AFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLF 138
+ N + ++F M G+S D+ T+ + C LG +HG K GL
Sbjct: 130 GYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDS 189
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
++ V NS I MY K G V+ R FDE P
Sbjct: 190 EVAVLNSFITMY-------------------------------MKCGSVEAGRRLFDEMP 218
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVW 258
K W A+ISGY QN + L L+ M+ + + PD VS+LS+CAH+GA G
Sbjct: 219 VKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHE 278
Query: 259 VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGD 318
V + + ++ +S + + MYA+CGNL A+ +FD MP + +V W AMI MHG
Sbjct: 279 VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGM 338
Query: 319 GIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYG 378
G L LF +M K GI+PD F+ V +ACS+SG+ +GL+L M Y +EP EHY
Sbjct: 339 GEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYS 398
Query: 379 CLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVR 438
CLVDLL R G +EAM I + +G+ W A L AC H +A LA ++
Sbjct: 399 CLVDLLGRAGRLDEAMEFIESMPVEPDGA----VWGALLGACKIHKNVDMAELAFAKVIE 454
Query: 439 LD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEK 497
+ N G YVL+SN+Y+ S + R+R +M+ + K PG S VE G V F+AG++
Sbjct: 455 FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDR 514
Query: 498 THPQMDEIHSILEKMH 513
+H Q +E+H +L+++
Sbjct: 515 SHEQTEEVHRMLDELE 530
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 199/438 (45%), Gaps = 46/438 (10%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
N ++ + ++ ++ +MLR+G SPD ++ P+ LK+CA+L G+ +H + +K
Sbjct: 22 NVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTK 81
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
G + FV +LI+MYC G + ARKVF+E P S +S
Sbjct: 82 GGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVC------------------ 123
Query: 194 FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGAL 253
+ A+ISGY N+ + Y+FR M+ T + D + ++ C L
Sbjct: 124 -----------YNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYL 172
Query: 254 DTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGL 313
G +H + L + + S + MY KCG+++ +RLFD MP + ++ WNA+ISG
Sbjct: 173 WLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGY 232
Query: 314 AMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPK 373
+ +G L+L+ +M+ G+ PD T ++V ++C++ G G + + K+ P
Sbjct: 233 SQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHE-VGKLVESNGFVPN 291
Query: 374 SEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAA 433
+ + +R G +A + + + ++W A + HG ++ +
Sbjct: 292 VFVSNASISMYARCGNLAKARAVFDIMP-----VKSLVSWTAMIGCYGMHGMGEIGLMLF 346
Query: 434 ESLV-RLDNPSG-LYVLISNLYAASG-RHADVRRVRDVMKNKRVDKAPGCSSVEIDGV-- 488
+ ++ R P G ++V++ + + SG + R + + +++ P S +D +
Sbjct: 347 DDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGR 406
Query: 489 ------VMEFIAGEKTHP 500
MEFI P
Sbjct: 407 AGRLDEAMEFIESMPVEP 424
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLN 264
W + + F E + L+R M + PD F IL +CA + +G +H ++
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRD--IVCWNAMISGLAMHGDGIGA 322
+ + T+L+ MY KCG + A+++F+ P VC+NA+ISG + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 323 LKLFSEMEKLGIKPDDITFIAVFTACS 349
+F M++ G+ D +T + + C+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCT 167
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 163/536 (30%), Positives = 275/536 (51%), Gaps = 48/536 (8%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
KQ H SGLD ++F + F + G + A KVF R+ V C+ ++ A+
Sbjct: 136 KQIHCVSCVSGLDMDAFVQGSM--FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYA 193
Query: 82 INGNLNRTLHVFTNMLRNGLS-----------------------------------PDNY 106
G L + + + M +G+ PD
Sbjct: 194 RKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV 253
Query: 107 TIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEI 166
T+ L + ++G +IHGY K GLL D V +++I MY G + +F++
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF 313
Query: 167 PSLSAVSWSLMISGYAKVGDVDLA----RLFFDETPEKDKGIWGAMISGYVQNNCFKEGL 222
+ A + I+G ++ G VD A LF ++T E + W ++I+G QN E L
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEAL 373
Query: 223 YLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMY 282
LFR MQ+ + P+ S+L AC ++ AL G H + R L ++ + ++L+DMY
Sbjct: 374 ELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMY 433
Query: 283 AKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFI 342
AKCG ++L++ +F+ MP +++VCWN++++G +MHG + +F + + +KPD I+F
Sbjct: 434 AKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFT 493
Query: 343 AVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITN 402
++ +AC G+ EG K M Y ++P+ EHY C+V+LL R G +EA +I+ +
Sbjct: 494 SLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPF 553
Query: 403 SNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRL--DNPSGLYVLISNLYAASGRHA 460
++ W A L++C LA +AAE L L +NP G YVL+SN+YAA G
Sbjct: 554 ----EPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENP-GTYVLLSNIYAAKGMWT 608
Query: 461 DVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
+V +R+ M++ + K PGCS +++ V +AG+K+HPQ+D+I ++++ ++
Sbjct: 609 EVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEM 664
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 208/456 (45%), Gaps = 49/456 (10%)
Query: 23 QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLI 82
QAHA++ SG N+ + ++++A S+ + A V Q I PT+ +++I A
Sbjct: 36 QAHARILKSGAQNDGYISAKLIA--SYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFV 142
+++ VF+ M +GL PD++ +P K CA L +G+ IH S GL D FV
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 143 GNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP---- 198
S+ MY G M ARKVFD + V+ S ++ YA+ G ++ E
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVW 258
E + W ++SG+ ++ KE + +F+ + PD+ S+L + L+ G
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 259 VHRYLNRARLPLSIRLSTSLLDMYAKCGN------------------------------- 287
+H Y+ + L + ++++DMY K G+
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 288 LDLAKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIA 343
+D A +F+ ++ ++V W ++I+G A +G I AL+LF EM+ G+KP+ +T +
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 344 VFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYG-CLVDLLSRTGFFEEAMVIIRRITN 402
+ AC +A+ G F+V + H G L+D+ ++ G + ++ +
Sbjct: 394 MLPAC--GNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 403 SNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVR 438
N + W + ++ HG+A+ ESL+R
Sbjct: 452 KN-----LVCWNSLMNGFSMHGKAKEVMSIFESLMR 482
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 271 bits (693), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 147/466 (31%), Positives = 248/466 (53%), Gaps = 52/466 (11%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + A KVF + V + ++I +L+N +L F LSP+
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFD------LSPER------- 88
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
DI + N++I+ Y G+M+ AR +FD++P +
Sbjct: 89 --------------------------DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVM 122
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLF-RLMQLT 231
SW+ ++ GYA +GD++ FD+ PE++ W +I GY QN E L F R++
Sbjct: 123 SWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEG 182
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRY---LNRARLPLSIRLSTSLLDMYAKCGNL 288
+ P+++ +LSACA +GA D G WVH+Y L ++ ++++ +L+DMY KCG +
Sbjct: 183 SVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVK--NALIDMYGKCGAI 240
Query: 289 DLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTAC 348
++A +F + RD++ WN MI+GLA HG G AL LF EM+ GI PD +TF+ V AC
Sbjct: 241 EIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCAC 300
Query: 349 SYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSE 408
+ G+ +GL + MF+ +++ P+ EH GC+VDLLSR GF +A+ I ++
Sbjct: 301 KHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPV----KA 356
Query: 409 ETLAWRAFLSACCNHGQAQLATLAAESLVRLD--NPSGLYVLISNLYAASGRHADVRRVR 466
+ + W L A + + + +A E L++L+ NP+ +V++SN+Y +GR D R++
Sbjct: 357 DAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPAN-FVMLSNIYGDAGRFDDAARLK 415
Query: 467 DVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
M++ K G S +E D +++F + + HP+ +E+ IL ++
Sbjct: 416 VAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 122/287 (42%), Gaps = 49/287 (17%)
Query: 146 LIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIW 205
L M C+ G + +A KVF E+ + V W+ MI+GY D+ AR +FD +PE+D +W
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLW 93
Query: 206 GAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNR 265
MISGY++ E LF M D+ W
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMS----------------------W------- 124
Query: 266 ARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKL 325
++L+ YA G+++ +R+FD MP+R++ WN +I G A +G L
Sbjct: 125 ----------NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGS 174
Query: 326 FSEMEKLG-IKPDDITFIAVFTACSYSGMASEGLKLLDKMFSV--YNMEPKSEHYGCLVD 382
F M G + P+D T V +AC+ G G K + K YN + L+D
Sbjct: 175 FKRMVDEGSVVPNDATMTLVLSACAKLGAFDFG-KWVHKYGETLGYN-KVDVNVKNALID 232
Query: 383 LLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
+ + G E AM + + I + ++W ++ HG A
Sbjct: 233 MYGKCGAIEIAMEVFKGIKR-----RDLISWNTMINGLAAHGHGTEA 274
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/510 (31%), Positives = 266/510 (52%), Gaps = 20/510 (3%)
Query: 11 LLEKCKN---MKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRI-- 65
LL C + ++ K+ HA + TSGL + F + G + A K+F I
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 66 QHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGE 125
T++ +F G L ++ +F M R + D+ ++ CA L D +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
HG + K+G+L + V N+L+ MY G + +++F+E+ S VSW++++ K
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT-DIGPDESIFVSIL 244
++ R F E PE++ W M++GY+ +E L L M G + S+L
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 245 SACAHMGALDTGVWVHRYLNRARLPLS-------IRLSTSLLDMYAKCGNLDLAKRLFDS 297
SACA G L G WVH Y + + + + + T+L+DMYAKCGN+D + +F
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 298 MPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEG 357
M R++V WNA+ SGLAMHG G + +F +M + +KPDD+TF AV +ACS+SG+ EG
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEG 370
Query: 358 LKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFL 417
+ + Y +EPK +HY C+VDLL R G EEA +++R + N E L + L
Sbjct: 371 WRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPN--EVVLG--SLL 425
Query: 418 SACCNHGQAQLATLAAESLVRLDNPSGLY-VLISNLYAASGRHADVRRVRDVMKNKRVDK 476
+C HG+ ++A L+++ + Y +L+SN+Y A GR +R ++ + + K
Sbjct: 426 GSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRK 485
Query: 477 APGCSSVEIDGVVMEFIAGEKTHPQMDEIH 506
PG SS+ ++ V F +G+++HP+ EI+
Sbjct: 486 IPGLSSIYVNDSVHRFSSGDRSHPRTKEIY 515
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 259/525 (49%), Gaps = 77/525 (14%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + A KVF + V ++K ++ NG ++ +F M P+ + + +
Sbjct: 93 GEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------PEKNKVSWTV 146
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
L+D + + Y ++ D S+I C G + AR++FDE+ S +
Sbjct: 147 MLIGFLQDGRIDDACKLY--EMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVI 204
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIW--------------------------- 205
+W+ M++GY + VD AR FD PEK + W
Sbjct: 205 TWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKP 264
Query: 206 ----GAMISGYVQN------------------------------NCFK-EGLYLFRLMQL 230
AMISG Q N F+ E L LF LMQ
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 231 TDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDL 290
+ P +SILS CA + +L G VH L R + + + +++ L+ MY KCG L
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 291 AKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLG-IKPDDITFIAVFTACS 349
+K +FD P +DI+ WN++ISG A HG G ALK+F EM G KP+++TF+A +ACS
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 350 YSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEE 409
Y+GM EGLK+ + M SV+ ++P + HY C+VD+L R G F EAM +I +T + +
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAA-- 502
Query: 410 TLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDV 468
W + L AC H Q +A A+ L+ ++ SG Y+L+SN+YA+ GR ADV +R +
Sbjct: 503 --VWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKL 560
Query: 469 MKNKRVDKAPGCSSVEIDGVVMEFI-AGEKTHPQMDEIHSILEKM 512
MK + V K+PGCS E++ V F G +HP+ + I IL+++
Sbjct: 561 MKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDEL 605
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 32/294 (10%)
Query: 114 ACAALRDHSLGEMIHGYSSKL-----GLLFD------IFVGNSLIAMYCVFGDMVAARKV 162
+C + S M+ GY + L LFD I N L++ Y G++ ARKV
Sbjct: 42 SCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKV 101
Query: 163 FDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGL 222
FD +P + VSW+ ++ GY G VD+A F + PEK+K W M+ G++Q+ +
Sbjct: 102 FDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDAC 161
Query: 223 YLFRLMQLTDIGPDESIF--VSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLD 280
L+ ++ PD+ S++ G +D + ++ S+ T+++
Sbjct: 162 KLYEMI------PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSER----SVITWTTMVT 211
Query: 281 MYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDIT 340
Y + +D A+++FD MP++ V W +M+ G +G A +LF E + +KP I
Sbjct: 212 GYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELF---EVMPVKP-VIA 267
Query: 341 FIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
A+ + G ++ ++ D M E + ++ + R GF EA+
Sbjct: 268 CNAMISGLGQKGEIAKARRVFDSM-----KERNDASWQTVIKIHERNGFELEAL 316
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 160/397 (40%), Gaps = 72/397 (18%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNML-RNGLS-------------- 102
A K+F + + N ++ ++ NG ++ VF M RN +S
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 103 ----------PDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCV 152
P+ + + + L+D + + Y ++ D S+I C
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY--EMIPDKDNIARTSMIHGLCK 184
Query: 153 FGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGY 212
G + AR++FDE+ S ++W+ M++GY + VD AR FD PEK + W +M+ GY
Sbjct: 185 EGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGY 244
Query: 213 VQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSI 272
VQN ++ LF +M V + AC
Sbjct: 245 VQNGRIEDAEELFEVMP-----------VKPVIAC------------------------- 268
Query: 273 RLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKL 332
+++ + G + A+R+FDSM +R+ W +I +G + AL LF M+K
Sbjct: 269 ---NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ 325
Query: 333 GIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEE 392
G++P T I++ + C+ G ++ ++ + L+ + + G +
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRC-QFDVDVYVASVLMTMYIKCGELVK 384
Query: 393 AMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
+ +I R S++ + W + +S +HG + A
Sbjct: 385 SKLIFDRFP-----SKDIIMWNSIISGYASHGLGEEA 416
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 34/269 (12%)
Query: 51 HQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPY 110
+G + A +VF ++ T+IK NG L +F M + G+ P T+
Sbjct: 277 QKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLIS 336
Query: 111 ALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLS 170
L CA+L G+ +H + D++V + L+ MY G++V ++ +FD PS
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKD 396
Query: 171 AVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQL 230
+ W+ +ISGYA G + A F E P +SG +
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFCEMP----------LSGSTK---------------- 430
Query: 231 TDIGPDESIFVSILSACAHMGALDTGVWVHRYLNR--ARLPLSIRLSTSLLDMYAKCGNL 288
P+E FV+ LSAC++ G ++ G+ ++ + P++ + ++DM + G
Sbjct: 431 ----PNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYAC-MVDMLGRAGRF 485
Query: 289 DLAKRLFDSMP-DRDIVCWNAMISGLAMH 316
+ A + DSM + D W +++ H
Sbjct: 486 NEAMEMIDSMTVEPDAAVWGSLLGACRTH 514
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGY-AKVGDVDLARLFFDETPEK 200
N I G + ARK+FD S S SW+ M++GY A + D AR FDE P++
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRD-ARKLFDEMPDR 77
Query: 201 DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI--FVSILSACAHMGALDTG-- 256
+ W ++SGY++N E +F LM P+ ++ + +++ H G +D
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLM------PERNVVSWTALVKGYVHNGKVDVAES 131
Query: 257 -VWVHRYLNRARLPLSIRLS-TSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLA 314
W ++P ++S T +L + + G +D A +L++ +PD+D + +MI GL
Sbjct: 132 LFW--------KMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLC 183
Query: 315 MHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKM 364
G A ++F EM + + IT+ + T + + K+ D M
Sbjct: 184 KEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRVDDARKIFDVM 229
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 165/454 (36%), Positives = 242/454 (53%), Gaps = 20/454 (4%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNM-LRNGLSPDNYTIPYALKACA 116
A ++F I P N ++ ++ N N + F M ++ S + YA +
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARR--- 168
Query: 117 ALRDHSLGEMIHGYSSKLGLLFDIFVG-NSLIAMYCVFGDMVAARKVFDEIPSLSAVSWS 175
GEM ++ V N++I+ Y GD+ A F P V+W+
Sbjct: 169 -------GEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWT 221
Query: 176 LMISGYAKVGDVDLAR-LFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG 234
MI+GY K V+LA +F D T K+ W AMISGYV+N+ ++GL LFR M I
Sbjct: 222 AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR 281
Query: 235 PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRL 294
P+ S S L C+ + AL G +H+ ++++ L + TSL+ MY KCG L A +L
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKL 341
Query: 295 FDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMA 354
F+ M +D+V WNAMISG A HG+ AL LF EM I+PD ITF+AV AC+++G+
Sbjct: 342 FEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLV 401
Query: 355 SEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWR 414
+ G+ + M Y +EP+ +HY C+VDLL R G EEA+ +IR + + + +
Sbjct: 402 NIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAA----VFG 457
Query: 415 AFLSACCNHGQAQLATLAAESLVRLD--NPSGLYVLISNLYAASGRHADVRRVRDVMKNK 472
L AC H +LA AAE L++L+ N +G YV ++N+YA+ R DV RVR MK
Sbjct: 458 TLLGACRVHKNVELAEFAAEKLLQLNSQNAAG-YVQLANIYASKNRWEDVARVRKRMKES 516
Query: 473 RVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIH 506
V K PG S +EI V F + ++ HP++D IH
Sbjct: 517 NVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 15/275 (5%)
Query: 156 MVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQN 215
M+ A ++FDEIP S+++M+S Y + + + A+ FFD P KD W MI+GY +
Sbjct: 109 MMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARR 168
Query: 216 NCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLS 275
++ LF M + +E + +++S G L+ + + +
Sbjct: 169 GEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKA----SHFFKVAPVRGVVAW 220
Query: 276 TSLLDMYAKCGNLDLAKRLFDSMP-DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGI 334
T+++ Y K ++LA+ +F M ++++V WNAMISG + LKLF M + GI
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 335 KPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
+P+ + CS G + + ++ S + L+ + + G +A
Sbjct: 281 RPNSSGLSSALLGCSELSALQLG-RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAW 339
Query: 395 VIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
+ + ++ +AW A +S HG A A
Sbjct: 340 KLFEVMK-----KKDVVAWNAMISGYAQHGNADKA 369
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 173/496 (34%), Positives = 251/496 (50%), Gaps = 46/496 (9%)
Query: 22 KQAHAQVFTSGLD---NNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIK 78
K+ H SG D N S AL + A C GSL A ++F + V N++I
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKC-----GSLETARQLFDGMLERNVVSWNSMID 310
Query: 79 AFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLF 138
A++ N N + +F ML G+ P + ++ AL ACA L D G IH S +LGL
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
++ V NSLI+MYC ++ A +F ++ S + VS
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS------------------------- 405
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVW 258
W AMI G+ QN + L F M+ + PD +VS+++A A + W
Sbjct: 406 ------WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459
Query: 259 VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGD 318
+H + R+ L ++ ++T+L+DMYAKCG + +A+ +FD M +R + WNAMI G HG
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 519
Query: 319 GIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYG 378
G AL+LF EM+K IKP+ +TF++V +ACS+SG+ GLK M Y++E +HYG
Sbjct: 520 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG 579
Query: 379 CLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVR 438
+VDLL R G EA I ++ + A L AC H A AAE L
Sbjct: 580 AMVDLLGRAGRLNEAWDFIMQMPV----KPAVNVYGAMLGACQIHKNVNFAEKAAERLFE 635
Query: 439 LDNP--SGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGE 496
L NP G +VL++N+Y A+ V +VR M + + K PGCS VEI V F +G
Sbjct: 636 L-NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGS 694
Query: 497 KTHPQMDEIHSILEKM 512
HP +I++ LEK+
Sbjct: 695 TAHPDSKKIYAFLEKL 710
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 170/348 (48%), Gaps = 35/348 (10%)
Query: 11 LLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLA-FCSHPHQGSLTYACKVFQRIQHPT 69
LLE+C ++K+L+Q VF +GL F +++++ FC + GS+ A +VF+ I
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRY---GSVDEAARVFEPIDSKL 99
Query: 70 VCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHG 129
+ +T++K F +L++ L F M + + P Y Y LK C + +G+ IHG
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 130 YSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDL 189
K G D+F L MY + ARKVFD +P VSW+ +++GY+
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYS------- 212
Query: 190 ARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAH 249
QN + L + + M ++ P VS+L A +
Sbjct: 213 ------------------------QNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 250 MGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAM 309
+ + G +H Y R+ + +ST+L+DMYAKCG+L+ A++LFD M +R++V WN+M
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 310 ISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEG 357
I + + A+ +F +M G+KP D++ + AC+ G G
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 195/442 (44%), Gaps = 43/442 (9%)
Query: 11 LLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH 67
LL+ C + +L K+ H + SG + FA++ + + Q + A KVF R+
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQ--VNEARKVFDRMPE 198
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
+ NTI+ + NG L + +M L P TI L A +ALR S+G+ I
Sbjct: 199 RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEI 258
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
HGY A R FD + ++S + ++ YAK G +
Sbjct: 259 HGY---------------------------AMRSGFDSLVNIS----TALVDMYAKCGSL 287
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
+ AR FD E++ W +MI YVQN KE + +F+ M + P + + L AC
Sbjct: 288 ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHAC 347
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWN 307
A +G L+ G ++H+ L ++ + SL+ MY KC +D A +F + R +V WN
Sbjct: 348 ADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWN 407
Query: 308 AMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSV 367
AMI G A +G I AL FS+M +KPD T+++V TA + + K + +
Sbjct: 408 AMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA-KWIHGVVMR 466
Query: 368 YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
++ LVD+ ++ G ++I R+ W A + HG +
Sbjct: 467 SCLDKNVFVTTALVDMYAKCG-----AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 428 LATLAAESLVR-LDNPSGLYVL 448
A E + + P+G+ L
Sbjct: 522 AALELFEEMQKGTIKPNGVTFL 543
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 150/347 (43%), Gaps = 52/347 (14%)
Query: 98 RNGLSPDNYTIPYAL--KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGD 155
RN + + Y P AL + C++L++ I K GL + F L++++C +G
Sbjct: 28 RNYIPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGS 84
Query: 156 MVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQN 215
+ A +VF+ I S V + M+ G+AKV D+D A FF
Sbjct: 85 VDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVR------------------- 125
Query: 216 NCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLS 275
M+ D+ P F +L C L G +H L ++ L +
Sbjct: 126 ------------MRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 276 TSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIK 335
T L +MYAKC ++ A+++FD MP+RD+V WN +++G + +G AL++ M + +K
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 336 PDDITFIAVFTACS-----YSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFF 390
P IT ++V A S G G + S+ N+ LVD+ ++ G
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST------ALVDMYAKCGSL 287
Query: 391 EEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLV 437
E A + + N ++W + + A + + A L + ++
Sbjct: 288 ETARQLFDGMLERN-----VVSWNSMIDAYVQNENPKEAMLIFQKML 329
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 138/333 (41%), Gaps = 42/333 (12%)
Query: 12 LEKCKNMKQLKQA---HAQVFTSGLDNN-SFALSRVLAFCSHPHQGSLTYACKVFQRIQH 67
L C ++ L++ H GLD N S S + +C + A +F ++Q
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK---EVDTAASMFGKLQS 400
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
T+ N +I F NG L+ F+ M + PD +T + A A L + I
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
HG + L ++FV +L+ MY G ++ AR +FD + +W+ MI GY G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG-- 518
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
+G K L LF MQ I P+ F+S++SAC
Sbjct: 519 -----------------FG------------KAALELFEEMQKGTIKPNGVTFLSVISAC 549
Query: 248 AHMGALDTGVWVHRYLNRA-RLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIV-C 305
+H G ++ G+ + + LS+ +++D+ + G L+ A MP + V
Sbjct: 550 SHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 609
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKLGIKPDD 338
+ AM+ +H + A K + +L PDD
Sbjct: 610 YGAMLGACQIHKNVNFAEKAAERLFELN--PDD 640
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 156/463 (33%), Positives = 248/463 (53%), Gaps = 36/463 (7%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
GS+ + VF ++ V NT+I AF+ NG + L + M + G D T+ L
Sbjct: 367 GSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALL 426
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
A + LR+ +G+ H + + G+ F+ + + LI MY G + ++K+F+
Sbjct: 427 SAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEG------- 478
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
SGYA E+D+ W +MISGY QN ++ +FR M +
Sbjct: 479 ------SGYA----------------ERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQN 516
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
I P+ SIL AC+ +G++D G +H + R L ++ ++++L+DMY+K G + A+
Sbjct: 517 IRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAE 576
Query: 293 RLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
+F +R+ V + MI G HG G A+ LF M++ GIKPD ITF+AV +ACSYSG
Sbjct: 577 DMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSG 636
Query: 353 MASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLA 412
+ EGLK+ ++M VYN++P SEHY C+ D+L R G EA ++ + N +E
Sbjct: 637 LIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAE---L 693
Query: 413 WRAFLSACCNHGQAQLATLAAESLVRLD---NPSGLYVLISNLYAASGRHADVRRVRDVM 469
W + L +C HG+ +LA +E L + D N SG VL+SN+YA + V +VR M
Sbjct: 694 WGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGM 753
Query: 470 KNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
+ K + K G S +EI G V F++ ++ HP EI+ +++ +
Sbjct: 754 REKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGL 796
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 134/293 (45%), Gaps = 34/293 (11%)
Query: 60 KVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALR 119
KVF ++ V NT+I ++ G F M+R + P + A + R
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 120 DHSLGEMIHGYSSKLG--LLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLM 177
+ +G KLG + D+FV +S I+MY
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMY--------------------------- 261
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLF-RLMQLTDIGPD 236
A++GD++ +R FD E++ +W MI YVQN+C E + LF + +I D
Sbjct: 262 ----AELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSD 317
Query: 237 ESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFD 296
E ++ SA + + ++ G H ++++ L I + SL+ MY++CG++ + +F
Sbjct: 318 EVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFL 377
Query: 297 SMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
SM +RD+V WN MIS +G L L EM+K G K D IT A+ +A S
Sbjct: 378 SMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAAS 430
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 158/371 (42%), Gaps = 38/371 (10%)
Query: 45 AFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNML-RNGLSP 103
A + G + + +VF + + NT+I ++ N L ++ +F + +
Sbjct: 257 AISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVS 316
Query: 104 DNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVF 163
D T A A +AL+ LG HG+ SK I + NSL+ MY G + + VF
Sbjct: 317 DEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVF 376
Query: 164 DEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLY 223
+ VSW+ MIS +VQN EGL
Sbjct: 377 LSMRERDVVSWNT-------------------------------MISAFVQNGLDDEGLM 405
Query: 224 LFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYA 283
L MQ D ++LSA +++ + G H +L R + +++ L+DMY+
Sbjct: 406 LVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYS 464
Query: 284 KCGNLDLAKRLFD--SMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITF 341
K G + ++++LF+ +RD WN+MISG +G +F +M + I+P+ +T
Sbjct: 465 KSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTV 524
Query: 342 IAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYG-CLVDLLSRTGFFEEAMVIIRRI 400
++ ACS G G +L FS+ ++ LVD+ S+ G + A + +
Sbjct: 525 ASILPACSQIGSVDLGKQL--HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQT 582
Query: 401 TNSNNGSEETL 411
N+ + T+
Sbjct: 583 KERNSVTYTTM 593
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 167 PSLSAVSWSLM--ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYL 224
P+L+ + S+ +S + G+ LAR FD P+ +W +I G++ NN E L
Sbjct: 33 PTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLF 92
Query: 225 FRLMQLTD--IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMY 282
+ M+ T D + S L ACA L G VH +L R S + SL++MY
Sbjct: 93 YSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY 152
Query: 283 AKCGN------LDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKP 336
C N D+ +++FD+M +++V WN +IS G A + F M ++ +KP
Sbjct: 153 VSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKP 212
Query: 337 DDITFIAVFTACSYS 351
++F+ VF A S S
Sbjct: 213 SPVSFVNVFPAVSIS 227
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 142/334 (42%), Gaps = 73/334 (21%)
Query: 41 SRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNG 100
SR+ C G+ A ++F I PT + NTII F+ N + L ++ M +
Sbjct: 44 SRLSKIC---QDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA 100
Query: 101 --LSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMY-------- 150
+ D YT LKACA ++ G+ +H + + V NSL+ MY
Sbjct: 101 PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPD 160
Query: 151 CVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMIS 210
C D+V RKVFD + + V+W+ +IS Y K G
Sbjct: 161 CFEYDVV--RKVFDNMRRKNVVAWNTLISWYVKTG------------------------- 193
Query: 211 GYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPL 270
+N E F +M ++ P FV++ A V + R + +A +
Sbjct: 194 ---RN---AEACRQFGIMMRMEVKPSPVSFVNVFPA----------VSISRSIKKANVFY 237
Query: 271 SIRLS------------TSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGD 318
+ L +S + MYA+ G+++ ++R+FDS +R+I WN MI +
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDC 297
Query: 319 GIGALKLFSEMEKLGIKP---DDITFIAVFTACS 349
+ +++LF +E +G K D++T++ +A S
Sbjct: 298 LVESIELF--LEAIGSKEIVSDEVTYLLAASAVS 329
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/503 (31%), Positives = 266/503 (52%), Gaps = 43/503 (8%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
KQ H Q F G ++ F S ++ S G L A KVF I + ++I+ +
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTC--GKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 82 INGNLNRTLHVFTNML------RNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLG 135
+NGN + +F ++L + + D+ + + AC+ + L E IH + K G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 136 LLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFD 195
+ VGN+L+ Y G+ G V +AR FD
Sbjct: 214 FDRGVSVGNTLLDAYAKGGE-----------------------------GGVAVARKIFD 244
Query: 196 ETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVS-ILSACAHMGALD 254
+ +KD+ + +++S Y Q+ E +FR + + +I +S +L A +H GAL
Sbjct: 245 QIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALR 304
Query: 255 TGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLA 314
G +H + R L + + TS++DMY KCG ++ A++ FD M ++++ W AMI+G
Sbjct: 305 IGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYG 364
Query: 315 MHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKS 374
MHG AL+LF M G++P+ ITF++V ACS++G+ EG + + M + +EP
Sbjct: 365 MHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGL 424
Query: 375 EHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAE 434
EHYGC+VDLL R GF ++A +I+R+ +++ W + L+AC H +LA ++
Sbjct: 425 EHYGCMVDLLGRAGFLQKAYDLIQRMKM----KPDSIIWSSLLAACRIHKNVELAEISVA 480
Query: 435 SLVRLDNPS-GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFI 493
L LD+ + G Y+L+S++YA +GR DV RVR +MKN+ + K PG S +E++G V F+
Sbjct: 481 RLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFL 540
Query: 494 AGEKTHPQMDEIHSILEKMHLQL 516
G++ HPQ ++I+ L +++ +L
Sbjct: 541 IGDEEHPQREKIYEFLAELNRKL 563
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 230/457 (50%), Gaps = 36/457 (7%)
Query: 54 SLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALK 113
SL ACK+F + ++ + NG + +F+ M G+ P YTI L
Sbjct: 271 SLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLN 330
Query: 114 ACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVS 173
AC+ + G+ +H + KLG +F +L+ MY
Sbjct: 331 ACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMY----------------------- 367
Query: 174 WSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDI 233
AK G + AR FD E+D +W ++ISGYVQN+ +E L L+R M+ I
Sbjct: 368 --------AKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGI 419
Query: 234 GPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKR 293
P++ S+L AC+ + L+ G VH + + L + + ++L MY+KCG+L+
Sbjct: 420 IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNL 479
Query: 294 LFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGM 353
+F P++D+V WNAMISGL+ +G G AL+LF EM G++PDD+TF+ + +ACS+ G
Sbjct: 480 VFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGF 539
Query: 354 ASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAW 413
G + M ++PK +HY C+VDLLSR G +EA + S N W
Sbjct: 540 VERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEA----KEFIESANIDHGLCLW 595
Query: 414 RAFLSACCNHGQAQLATLAAESLVRLDN-PSGLYVLISNLYAASGRHADVRRVRDVMKNK 472
R LSAC NHG+ +L A E L+ L + S YV +S +Y A GR DV RV M+
Sbjct: 596 RILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRAN 655
Query: 473 RVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSIL 509
V K GCS +E+ F+ G+ HP ++E ++
Sbjct: 656 GVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLV 692
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 177/398 (44%), Gaps = 55/398 (13%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLD---NNSFALSRVLAFCSHPHQGSLTYACKVFQRI 65
LT + +N+ + H Q+ +G ++ L A C G L A +F I
Sbjct: 21 LTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKC-----GKLAKAHSIFNAI 75
Query: 66 QHPTVCICNTIIKAFLINGNLNRT---LHVFTNMLRNGLSPDNYTIPYALKACAALRDHS 122
V N++I + NG ++ + + +F M + P+ YT+ KA ++L+ +
Sbjct: 76 ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSST 135
Query: 123 LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYA 182
+G H K+ DI+V SL+ MYC
Sbjct: 136 VGRQAHALVVKMSSFGDIYVDTSLVGMYC------------------------------- 164
Query: 183 KVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRL-MQLTDIGPD-ESIF 240
K G V+ F PE++ W M+SGY +E + +F L ++ + G D + +F
Sbjct: 165 KAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVF 224
Query: 241 VSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD 300
++LS+ A + G +H + L + LS +L+ MY+KC +L+ A ++FDS D
Sbjct: 225 TAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGD 284
Query: 301 RDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL 360
R+ + W+AM++G + +G+ + A+KLFS M GIKP + T + V ACS EG +L
Sbjct: 285 RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL 344
Query: 361 LD---------KMFSVYNMEPKSEHYGCLVDLLSRTGF 389
+F+ + GCL D +R GF
Sbjct: 345 HSFLLKLGFERHLFATTALVDMYAKAGCLAD--ARKGF 380
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 176/411 (42%), Gaps = 43/411 (10%)
Query: 22 KQAHAQVFT-SGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAF 80
+QAHA V S + S V +C G + KVF + +T++ +
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCK---AGLVEDGLKVFAYMPERNTYTWSTMVSGY 194
Query: 81 LINGNLNRTLHVFTNMLRNGL--SPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLF 138
G + + VF LR S +Y L + AA LG IH + K GLL
Sbjct: 195 ATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLG 254
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
+ + N+L+ MY +K ++ A FD +
Sbjct: 255 FVALSNALVTMY-------------------------------SKCESLNEACKMFDSSG 283
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVW 258
+++ W AM++GY QN E + LF M I P E V +L+AC+ + L+ G
Sbjct: 284 DRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQ 343
Query: 259 VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGD 318
+H +L + + +T+L+DMYAK G L A++ FD + +RD+ W ++ISG + D
Sbjct: 344 LHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSD 403
Query: 319 GIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYG 378
AL L+ M+ GI P+D T +V ACS G ++ + +
Sbjct: 404 NEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK-HGFGLEVPIGS 462
Query: 379 CLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
L + S+ G E+ ++ RR N ++ ++W A +S ++GQ A
Sbjct: 463 ALSTMYSKCGSLEDGNLVFRRTPN-----KDVVSWNAMISGLSHNGQGDEA 508
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 45/320 (14%)
Query: 1 MSSCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACK 60
+++CS C +++ KQ H+ + G + + FA + ++ + G L A K
Sbjct: 329 LNACSDICY--------LEEGKQLHSFLLKLGFERHLFATTALVDM--YAKAGCLADARK 378
Query: 61 VFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRD 120
F +Q V + ++I ++ N + L ++ M G+ P++ T+ LKAC++L
Sbjct: 379 GFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLAT 438
Query: 121 HSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISG 180
LG+ +HG++ K G ++ +G++L MY G + VF P+ VSW+ MISG
Sbjct: 439 LELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISG 498
Query: 181 YAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIF 240
+ G D E L LF M + PD+ F
Sbjct: 499 LSHNGQGD-------------------------------EALELFEEMLAEGMEPDDVTF 527
Query: 241 VSILSACAHMGALDTGVWVHRYLNRARLPLSIRLS--TSLLDMYAKCGNLDLAKRLFDSM 298
V+I+SAC+H G ++ G W + + ++ L ++ ++D+ ++ G L AK +S
Sbjct: 528 VNIISACSHKGFVERG-WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESA 586
Query: 299 P-DRDIVCWNAMISGLAMHG 317
D + W ++S HG
Sbjct: 587 NIDHGLCLWRILLSACKNHG 606
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 30/249 (12%)
Query: 101 LSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAAR 160
L+P T+ L + R+ G +HG + G I N L+ Y G + A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 161 KVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKE 220
+F+ I VSW+ +I+GY++ G + S Y
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGIS---------------------SSYTV------ 102
Query: 221 GLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLD 280
+ LFR M+ DI P+ I A + + + G H + + I + TSL+
Sbjct: 103 -MQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVG 161
Query: 281 MYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEM--EKLGIKPDD 338
MY K G ++ ++F MP+R+ W+ M+SG A G A+K+F+ EK D
Sbjct: 162 MYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD 221
Query: 339 ITFIAVFTA 347
F AV ++
Sbjct: 222 YVFTAVLSS 230
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 231 TDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDL 290
T++ P S + L+ + L G VH + R I+ + L++ YAKCG L
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK 67
Query: 291 AKRLFDSMPDRDIVCWNAMISGLAMHGDGIGA----LKLFSEMEKLGIKPDDITFIAVFT 346
A +F+++ +D+V WN++I+G + +G GI + ++LF EM I P+ T +F
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNG-GISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 347 ACS---YSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNS 403
A S S + + L+ KM S ++ + LV + + G E+ + + +
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTS----LVGMYCKAGLVEDGLKVFAYMPER 182
Query: 404 NNGSEETLAWRAFLSACCNHGQAQLA 429
N T W +S G+ + A
Sbjct: 183 N-----TYTWSTMVSGYATRGRVEEA 203
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 266/513 (51%), Gaps = 30/513 (5%)
Query: 28 VFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLN 87
VF + N + + +L+ ++ + AC +F+ ++ + N ++ F+ +
Sbjct: 179 VFDRMPEKNDVSWNALLS--AYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIV 236
Query: 88 RTLHVFTNM-LRNGLSPDNYTIPYA----LKACAALRDHS-------LGEMIHGY----- 130
F +M +R+ +S + YA + L D S M+ GY
Sbjct: 237 EARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM 296
Query: 131 SSKLGLLFDIF------VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKV 184
+ LFD N+++A Y M A+++FD +P + +W+ MI+GYA+
Sbjct: 297 VEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQC 356
Query: 185 GDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSIL 244
G + A+ FD+ P++D W AMI+GY Q+ E L LF M+ + S F S L
Sbjct: 357 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSAL 416
Query: 245 SACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIV 304
S CA + AL+ G +H L + + +LL MY KCG+++ A LF M +DIV
Sbjct: 417 STCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIV 476
Query: 305 CWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKM 364
WN MI+G + HG G AL+ F M++ G+KPDD T +AV +ACS++G+ +G + M
Sbjct: 477 SWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTM 536
Query: 365 FSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
Y + P S+HY C+VDLL R G E+A +++ + + + W L A HG
Sbjct: 537 TQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAA----IWGTLLGASRVHG 592
Query: 425 QAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSV 483
+LA AA+ + ++ SG+YVL+SNLYA+SGR DV ++R M++K V K PG S +
Sbjct: 593 NTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWI 652
Query: 484 EIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
EI F G++ HP+ DEI + LE++ L++
Sbjct: 653 EIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRM 685
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 188/460 (40%), Gaps = 90/460 (19%)
Query: 44 LAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSP 103
+A S+ G A +VF+R+ + N +I +L NG +F M P
Sbjct: 69 VAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM------P 122
Query: 104 DNYTIPYALKACAALRDHSLGE------------------MIHGYSSK------------ 133
+ + + + +R+ +LG+ M+ GY+
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 134 --------LGLLFDIFVGNS----------------LIAMYCVFG------DMVAARKVF 163
L +V NS L++ C+ G +V AR+ F
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFF 242
Query: 164 DEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLY 223
D + VSW+ +I+GYA+ G +D AR FDE+P +D W AM+SGY+QN +E
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 224 LFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYA 283
LF M +E + ++L+ ++ + L ++ +++ YA
Sbjct: 303 LFDKMPER----NEVSWNAMLAGYVQGERMEMA----KELFDVMPCRNVSTWNTMITGYA 354
Query: 284 KCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIA 343
+CG + AK LFD MP RD V W AMI+G + G AL+LF +ME+ G + + +F +
Sbjct: 355 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 344 VFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVD-----LLSRTGFFEEAMVIIR 398
+ C+ G +L ++ GC V + + G EEA + +
Sbjct: 415 ALSTCADVVALELGKQLHGRLVK------GGYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 399 RITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVR 438
+ ++ ++W ++ HG ++A ES+ R
Sbjct: 469 EM-----AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/397 (38%), Positives = 222/397 (55%), Gaps = 37/397 (9%)
Query: 118 LRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLM 177
+ D LGE IH + G I+V NSL+ +Y GD+ +A KV
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKV--------------- 45
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDE 237
FD+ PEKD W ++I+G+ +N +E L L+ M I PD
Sbjct: 46 ----------------FDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDG 89
Query: 238 SIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDS 297
VS+LSACA +GAL G VH Y+ + L ++ S LLD+YA+CG ++ AK LFD
Sbjct: 90 FTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDE 149
Query: 298 MPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKL-GIKPDDITFIAVFTACSYSGMASE 356
M D++ V W ++I GLA++G G A++LF ME G+ P +ITF+ + ACS+ GM E
Sbjct: 150 MVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKE 209
Query: 357 GLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAF 416
G + +M Y +EP+ EH+GC+VDLL+R G ++A I+ + N + WR
Sbjct: 210 GFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPN----VVIWRTL 265
Query: 417 LSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVD 475
L AC HG + LA A +++L+ N SG YVL+SN+YA+ R +DV+++R M V
Sbjct: 266 LGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVK 325
Query: 476 KAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
K PG S VE+ V EF+ G+K+HPQ D I++ L++M
Sbjct: 326 KVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 362
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 147/316 (46%), Gaps = 38/316 (12%)
Query: 25 HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLING 84
H+ V SG + + + +L + + G + A KVF ++ + N++I F NG
Sbjct: 11 HSVVIRSGFGSLIYVQNSLLHL--YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENG 68
Query: 85 NLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGN 144
L ++T M G+ PD +TI L ACA + +LG+ +H Y K+GL ++ N
Sbjct: 69 KPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 128
Query: 145 SLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGI 204
L+ +Y G + A+ +FDE+ ++VSW+ +I G A
Sbjct: 129 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA---------------------- 166
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTD-IGPDESIFVSILSACAHMGALDTGV-WVHRY 262
++G+ KE + LF+ M+ T+ + P E FV IL AC+H G + G + R
Sbjct: 167 ----VNGF-----GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM 217
Query: 263 LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP-DRDIVCWNAMISGLAMHGDGIG 321
++ I ++D+ A+ G + A SMP ++V W ++ +HGD
Sbjct: 218 REEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD--S 275
Query: 322 ALKLFSEMEKLGIKPD 337
L F+ ++ L ++P+
Sbjct: 276 DLAEFARIQILQLEPN 291
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 163/484 (33%), Positives = 243/484 (50%), Gaps = 42/484 (8%)
Query: 40 LSRVLAFCS-----HPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFT 94
SR FC+ + G L A VF+ + +V ++I + G + +F
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 95 NMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFG 154
M G+SPD YT+ L CA R G+ +H + + L FDIFV N+L+ MY
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY---- 442
Query: 155 DMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQ 214
AK G + A L F E KD W +I GY +
Sbjct: 443 ---------------------------AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 215 NNCFKEGLYLFRLM-QLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIR 273
N E L LF L+ + PDE +L ACA + A D G +H Y+ R
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 535
Query: 274 LSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLG 333
++ SL+DMYAKCG L LA LFD + +D+V W MI+G MHG G A+ LF++M + G
Sbjct: 536 VANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG 595
Query: 334 IKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEA 393
I+ D+I+F+++ ACS+SG+ EG + + M +EP EHY C+VD+L+RTG +A
Sbjct: 596 IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA 655
Query: 394 MVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNL 452
R I N + T+ W A L C H +LA AE + L+ +G YVL++N+
Sbjct: 656 Y---RFIENMPIPPDATI-WGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANI 711
Query: 453 YAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
YA + + V+R+R + + + K PGCS +EI G V F+AG+ ++P+ + I + L K+
Sbjct: 712 YAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 771
Query: 513 HLQL 516
++
Sbjct: 772 RARM 775
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 183/397 (46%), Gaps = 51/397 (12%)
Query: 10 TLLEKCKNMKQLKQA-HAQVFTSGLDNNSFALSRVLAF---CSHPHQGSLTYACKVFQRI 65
++L+ C + K LK F G N F + L + + G L A +VF +
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRG---NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 66 QHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGE 125
+ N ++ +G+ + ++ +F M+ +G+ D+YT K+ ++LR GE
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
+HG+ K G VGNSL+A Y + +ARKVFDE+ +SW+
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWN---------- 265
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILS 245
++I+GYV N ++GL +F M ++ I D + VS+ +
Sbjct: 266 ---------------------SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFA 304
Query: 246 ACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVC 305
CA + G VH +A R +LLDMY+KCG+LD AK +F M DR +V
Sbjct: 305 GCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS 364
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEG------LK 359
+ +MI+G A G A+KLF EME+ GI PD T AV C+ + EG +K
Sbjct: 365 YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 424
Query: 360 LLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVI 396
D F ++ L+D+ ++ G +EA ++
Sbjct: 425 ENDLGFDIFVSNA-------LMDMYAKCGSMQEAELV 454
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 149/335 (44%), Gaps = 36/335 (10%)
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
+V NT ++ F +GNL + + + + P T+ L+ CA + G+ +
Sbjct: 60 SVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDP--RTLCSVLQLCADSKSLKDGKEVD 117
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVD 188
+ G + D +G+ L MY GD+ A +VFDE+ A+ W+++++ AK GD
Sbjct: 118 NFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD-- 175
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
F + LF+ M + + D F + + +
Sbjct: 176 -----------------------------FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFS 206
Query: 249 HMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNA 308
+ ++ G +H ++ ++ + SL+ Y K +D A+++FD M +RD++ WN+
Sbjct: 207 SLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNS 266
Query: 309 MISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVY 368
+I+G +G L +F +M GI+ D T ++VF C+ S + S G + V
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV--HSIGVK 324
Query: 369 NMEPKSEHY-GCLVDLLSRTGFFEEAMVIIRRITN 402
+ + + L+D+ S+ G + A + R +++
Sbjct: 325 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 258/510 (50%), Gaps = 40/510 (7%)
Query: 41 SRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNG 100
S V +C G + A +F R+ V +I + G +F M + G
Sbjct: 213 SMVHGYC---KMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEG 269
Query: 101 -LSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAA 159
+ ++ T+ KAC + G IHG S++ L FD+F+GNSL++MY G M A
Sbjct: 270 DVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEA 329
Query: 160 RKVF-------------------------------DEIPSLSAVSWSLMISGYAKVGDVD 188
+ VF +++P VSW+ MI G++ G++
Sbjct: 330 KAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEIS 389
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
F PEKD W AMIS +V N ++E L F M ++ P+ F S+LSA A
Sbjct: 390 KCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATA 449
Query: 249 HMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNA 308
+ L G+ +H + + + + + SL+ MY KCGN + A ++F + + +IV +N
Sbjct: 450 SLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNT 509
Query: 309 MISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVY 368
MISG + +G G ALKLFS +E G +P+ +TF+A+ +AC + G G K M S Y
Sbjct: 510 MISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSY 569
Query: 369 NMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQL 428
N+EP +HY C+VDLL R+G ++A +I + + W + LSA H + L
Sbjct: 570 NIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSG----VWGSLLSASKTHLRVDL 625
Query: 429 ATLAAESLVRLDNPSGL-YVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDG 487
A LAA+ L+ L+ S YV++S LY+ G++ D R+ ++ K+KR+ K PG S + + G
Sbjct: 626 AELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKG 685
Query: 488 VVMEFIAGEKTHPQMDEIHSILEKMHLQLD 517
V F+AG+++ ++EI L+ + +++
Sbjct: 686 EVHNFLAGDESQLNLEEIGFTLKMIRKEME 715
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 161/375 (42%), Gaps = 40/375 (10%)
Query: 49 HPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVF--------------- 93
H G+L A +F+++ + ++ +I A+ NG +++ VF
Sbjct: 60 HARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMI 119
Query: 94 TNMLRNGLS-----------PDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFV 142
T M++N P+ + YA +R E Y+ D
Sbjct: 120 TAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVA 179
Query: 143 GNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDK 202
N L++ Y G A +VF + VS S M+ GY K+G + AR FD E++
Sbjct: 180 SNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNV 239
Query: 203 GIWGAMISGYVQNNCFKEGLYLF-RLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHR 261
W AMI GY + F++G LF R+ Q D+ + + + AC G +H
Sbjct: 240 ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHG 299
Query: 262 YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG 321
++R L + L SL+ MY+K G + AK +F M ++D V WN++I+GL
Sbjct: 300 LVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISE 359
Query: 322 ALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEH--YGC 379
A +LF +M D +++ + S G S+ ++L + M P+ ++ +
Sbjct: 360 AYELFEKMP----GKDMVSWTDMIKGFSGKGEISKCVEL-------FGMMPEKDNITWTA 408
Query: 380 LVDLLSRTGFFEEAM 394
++ G++EEA+
Sbjct: 409 MISAFVSNGYYEEAL 423
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 137/316 (43%), Gaps = 39/316 (12%)
Query: 140 IFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPE 199
IF NS I+ + G++ A +F ++ + S VSW MIS YA+ G + A FDE P
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 200 KDKGIWGAMISGYVQNNC-FKEGLYLF-------------RLMQLTDIGP-DESIFVSIL 244
+ + AMI+ ++N C + LF + G DE+ F+
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 245 SACAHMGALDTGVWVHRYLNRARLPLSIRL-----------STSLLDMYAKCGNLDLAKR 293
+ ++ + V + YL + ++R+ +S++ Y K G + A+
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARS 229
Query: 294 LFDSMPDRDIVCWNAMISGLAMHG---DGIGALKLFSEMEKLG-IKPDDITFIAVFTACS 349
LFD M +R+++ W AMI G G DG G LF M + G +K + T +F AC
Sbjct: 230 LFDRMTERNVITWTAMIDGYFKAGFFEDGFG---LFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 350 YSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEE 409
EG + + + S +E L+ + S+ G+ EA + + N ++
Sbjct: 287 DFVRYREGSQ-IHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN-----KD 340
Query: 410 TLAWRAFLSACCNHGQ 425
+++W + ++ Q
Sbjct: 341 SVSWNSLITGLVQRKQ 356
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 167/511 (32%), Positives = 257/511 (50%), Gaps = 50/511 (9%)
Query: 10 TLLEKCKNMKQLKQA---HAQVFTSGLDNN---SFALSRVLAFCSHPHQGSLTYACKVFQ 63
TLL+KC K L Q HA + S ++ L + A C GSL A KVF+
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC-----GSLEEARKVFE 119
Query: 64 RIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSL 123
++ T+I + + L F MLR G SP+ +T+ +KA AA R
Sbjct: 120 KMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179
Query: 124 GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK 183
G +HG+ K G ++ VG++L+ +Y +G M
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLM--------------------------- 212
Query: 184 VGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
D A+L FD ++ W A+I+G+ + + ++ L LF+ M P + S+
Sbjct: 213 ----DDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI 303
AC+ G L+ G WVH Y+ ++ L +LLDMYAK G++ A+++FD + RD+
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDK 363
V WN++++ A HG G A+ F EM ++GI+P++I+F++V TACS+SG+ EG +
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 388
Query: 364 MFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLA-WRAFLSACCN 422
M + P++ HY +VDLL R G A+ I + E T A W+A L+AC
Sbjct: 389 M-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP-----IEPTAAIWKALLNACRM 442
Query: 423 HGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCS 481
H +L AAE + LD + G +V++ N+YA+ GR D RVR MK V K P CS
Sbjct: 443 HKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 502
Query: 482 SVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
VEI+ + F+A ++ HPQ +EI E++
Sbjct: 503 WVEIENAIHMFVANDERHPQREEIARKWEEV 533
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 8/207 (3%)
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
I D + ++L C L G VH ++ ++ I + +LL+MYAKCG+L+ A+
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 293 RLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
++F+ MP RD V W +ISG + H AL F++M + G P++ T +V A +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 353 MASEGLKLLDKMFSVYNMEPKSEHYG-CLVDLLSRTGFFEEAMVIIRRITNSNNGSEETL 411
G +L F V + H G L+DL +R G ++A ++ + + N+ +
Sbjct: 176 RGCCGHQL--HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-----V 228
Query: 412 AWRAFLSACCNHGQAQLATLAAESLVR 438
+W A ++ + A + ++R
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLR 255
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 265 bits (676), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 159/489 (32%), Positives = 247/489 (50%), Gaps = 38/489 (7%)
Query: 25 HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLING 84
H+ V G +++ A++ +L+ S G L A K+F I +V + + +G
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSG--SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG 191
Query: 85 NLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGN 144
+ +F M+ G+ PD+Y I L AC + D GE I Y ++ + + FV
Sbjct: 192 RHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRT 251
Query: 145 SLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGI 204
+L+ +Y AK G ++ AR FD EKD
Sbjct: 252 TLVNLY-------------------------------AKCGKMEKARSVFDSMVEKDIVT 280
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLN 264
W MI GY N+ KEG+ LF M ++ PD+ V LS+CA +GALD G W ++
Sbjct: 281 WSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLID 340
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALK 324
R ++ ++ +L+DMYAKCG + +F M ++DIV NA ISGLA +G +
Sbjct: 341 RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFA 400
Query: 325 LFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLL 384
+F + EKLGI PD TF+ + C ++G+ +GL+ + + VY ++ EHYGC+VDL
Sbjct: 401 VFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLW 460
Query: 385 SRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDN-PS 443
R G ++A +I + N + W A LS C QLA + L+ L+ +
Sbjct: 461 GRAGMLDDAYRLICDMPMRPNA----IVWGALLSGCRLVKDTQLAETVLKELIALEPWNA 516
Query: 444 GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMD 503
G YV +SN+Y+ GR + VRD+M K + K PG S +E++G V EF+A +K+HP D
Sbjct: 517 GNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSD 576
Query: 504 EIHSILEKM 512
+I++ LE +
Sbjct: 577 KIYAKLEDL 585
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 202/431 (46%), Gaps = 45/431 (10%)
Query: 2 SSCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKV 61
+S ++ TL+ + LKQ H + L +++F ++ +L Q +Y +
Sbjct: 10 TSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYL--L 67
Query: 62 FQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDH 121
F Q P + + N++I F+ N + TL +F ++ ++GL +T P LKAC
Sbjct: 68 FSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSR 127
Query: 122 SLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGY 181
LG +H K G D+ SL+++Y SG
Sbjct: 128 KLGIDLHSLVVKCGFNHDVAAMTSLLSIY----------------------------SGS 159
Query: 182 AKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFV 241
++ D A FDE P++ W A+ SGY + +E + LF+ M + PD V
Sbjct: 160 GRLND---AHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIV 216
Query: 242 SILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR 301
+LSAC H+G LD+G W+ +Y+ + + + T+L+++YAKCG ++ A+ +FDSM ++
Sbjct: 217 QVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEK 276
Query: 302 DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG---MASEGL 358
DIV W+ MI G A + ++LF +M + +KPD + + ++C+ G + G+
Sbjct: 277 DIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGI 336
Query: 359 KLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLS 418
L+D+ + N+ + L+D+ ++ G + + + ++ + A +S
Sbjct: 337 SLIDRHEFLTNLFMAN----ALIDMYAKCGAMARGFEVFKEMK-----EKDIVIMNAAIS 387
Query: 419 ACCNHGQAQLA 429
+G +L+
Sbjct: 388 GLAKNGHVKLS 398
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 224/407 (55%), Gaps = 9/407 (2%)
Query: 11 LLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTV 70
L C N QLKQ H ++ L N+ + ++++ S G YA VF ++Q P+
Sbjct: 26 FLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSF--GETQYASLVFNQLQSPST 83
Query: 71 CICNTIIKAFLINGNLNRTLHVFTNMLRNGLSP-DNYTIPYALKACAALRDHSLGEMIHG 129
N +I++ +N L +F M+ + S D +T P+ +KAC A LG +HG
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 130 YSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDL 189
+ K G D+F N+L+ +Y G + RKVFD++P S VSW+ M+ G +D
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 190 ARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAH 249
A + F++ P ++ W AMI+ YV+N E LFR MQ+ D+ P+E V++L A
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 250 MGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAM 309
+G+L G WVH Y ++ L L T+L+DMY+KCG+L A+++FD M + + WN+M
Sbjct: 264 LGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSM 323
Query: 310 ISGLAMHGDGIGALKLFSEMEKLG-IKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVY 368
I+ L +HG G AL LF EME+ ++PD ITF+ V +AC+ +G +GL+ +M VY
Sbjct: 324 ITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVY 383
Query: 369 NMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRIT-----NSNNGSEET 410
+ P EH C++ LL + E+A ++ + NS+ G+E T
Sbjct: 384 GISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDFNSSFGNEYT 430
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 116/281 (41%), Gaps = 48/281 (17%)
Query: 110 YALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL 169
Y L+ C+ + S + IH K L D + LI++ FG+ A VF+++ S
Sbjct: 25 YFLRTCS---NFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81
Query: 170 SAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQ 229
S +W+LMI L + P +E L LF LM
Sbjct: 82 STFTWNLMIRS-----------LSVNHKP--------------------REALLLFILMM 110
Query: 230 LTDIGP-DESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNL 288
++ D+ F ++ AC ++ G VH +A + +L+D+Y KCG
Sbjct: 111 ISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKP 170
Query: 289 DLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTAC 348
D +++FD MP R IV W M+ GL + A +F++M + +++ A+ TA
Sbjct: 171 DSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV----VSWTAMITAY 226
Query: 349 SYSGMASEGLKLLDKM---------FSVYNMEPKSEHYGCL 380
+ E +L +M F++ N+ S G L
Sbjct: 227 VKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSL 267
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 273/517 (52%), Gaps = 47/517 (9%)
Query: 8 CLTLLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQR 64
C ++L C ++ L Q HA + L N+S+ + ++ + LT A KVF
Sbjct: 353 CSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDM--YAKCDCLTDARKVFDI 410
Query: 65 IQHPTVCICNTIIKAFLINGN---LNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDH 121
V + N +I+ + G L+ L++F +M + P T L+A A+L
Sbjct: 411 FAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSL 470
Query: 122 SLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGY 181
L + IHG K GL DIF G++LI +Y S
Sbjct: 471 GLSKQIHGLMFKYGLNLDIFAGSALIDVY----------------------------SNC 502
Query: 182 AKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFV 241
+ D +RL FDE KD IW +M +GYVQ + +E L LF +QL+ PDE F
Sbjct: 503 YCLKD---SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFA 559
Query: 242 SILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR 301
++++A ++ ++ G H L + L + ++ +LLDMYAKCG+ + A + FDS R
Sbjct: 560 NMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR 619
Query: 302 DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLL 361
D+VCWN++IS A HG+G AL++ +M GI+P+ ITF+ V +ACS++G+ +GLK
Sbjct: 620 DVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQF 679
Query: 362 DKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACC 421
+ M + +EP++EHY C+V LL R G +A +I ++ + WR+ LS C
Sbjct: 680 ELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPT----KPAAIVWRSLLSGCA 734
Query: 422 NHGQAQLATLAAESLVRLDNP--SGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPG 479
G +LA AAE + L +P SG + ++SN+YA+ G + ++VR+ MK + V K PG
Sbjct: 735 KAGNVELAEHAAEMAI-LSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPG 793
Query: 480 CSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
S + I+ V F++ +K+H + ++I+ +L+ + +Q+
Sbjct: 794 RSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 193/431 (44%), Gaps = 39/431 (9%)
Query: 10 TLLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
T+L C + L KQ HA + GL+ ++ +L VL S+ G + A K+F +
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILRYGLEMDA-SLMNVL-IDSYVKCGRVIAAHKLFNGMP 311
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
+ + T++ + N + +FT+M + GL PD Y L +CA+L G
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ 371
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
+H Y+ K L D +V NSLI MY + ARKVFD + V ++ MI GY+++G
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
W E L +FR M+ I P FVS+L A
Sbjct: 432 Q-----------------WE-----------LHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
A + +L +H + + L L I ++L+D+Y+ C L ++ +FD M +D+V W
Sbjct: 464 SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIW 523
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
N+M +G + AL LF E++ +PD+ TF + TA G + ++
Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK 583
Query: 367 VYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
+E L+D+ ++ G E+A + S + + W + +S+ NHG+
Sbjct: 584 -RGLECNPYITNALLDMYAKCGSPEDAHKAF-----DSAASRDVVCWNSVISSYANHGEG 637
Query: 427 QLATLAAESLV 437
+ A E ++
Sbjct: 638 KKALQMLEKMM 648
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 159/328 (48%), Gaps = 36/328 (10%)
Query: 25 HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLING 84
H Q+ GL+ +++ LS +L + G + YA KVF+++ + +T++ A +G
Sbjct: 67 HGQIIVWGLELDTY-LSNIL-INLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 85 NLNRTLHVFTNMLRNGL-SPDNYTIPYALKACAAL--RDHSLGEMIHGYSSKLGLLFDIF 141
+L VF R SP+ Y + ++AC+ L R + + + K G D++
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
VG LI Y G++ AR VFD +P S V+W+ MISG K+G
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG---------------- 228
Query: 202 KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHR 261
YV L LF + ++ PD I ++LSAC+ + L+ G +H
Sbjct: 229 --------RSYVS-------LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHA 273
Query: 262 YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG 321
++ R L + L L+D Y KCG + A +LF+ MP+++I+ W ++SG +
Sbjct: 274 HILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKE 333
Query: 322 ALKLFSEMEKLGIKPDDITFIAVFTACS 349
A++LF+ M K G+KPD ++ T+C+
Sbjct: 334 AMELFTSMSKFGLKPDMYACSSILTSCA 361
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 150/330 (45%), Gaps = 36/330 (10%)
Query: 23 QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLI 82
Q + + SG D + + + ++ F + G++ YA VF + + T+I +
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDF--YLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFV 142
G +L +F ++ + + PD Y + L AC+ L G+ IH + + GL D +
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 143 GNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDK 202
N LI Y G ++AA K+ F+ P K+
Sbjct: 287 MNVLIDSYVKCGRVIAAHKL-------------------------------FNGMPNKNI 315
Query: 203 GIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRY 262
W ++SGY QN KE + LF M + PD SIL++CA + AL G VH Y
Sbjct: 316 ISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAY 375
Query: 263 LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGI-- 320
+A L ++ SL+DMYAKC L A+++FD D+V +NAMI G + G
Sbjct: 376 TIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWEL 435
Query: 321 -GALKLFSEMEKLGIKPDDITFIAVFTACS 349
AL +F +M I+P +TF+++ A +
Sbjct: 436 HEALNIFRDMRFRLIRPSLLTFVSLLRASA 465
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 139/340 (40%), Gaps = 44/340 (12%)
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
++HG GL D ++ N LI +Y G MV ARKV
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKV----------------------- 101
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLF-RLMQLTDIGPDESIFVSIL 244
F++ PE++ W M+S + ++E L +F + P+E I S +
Sbjct: 102 --------FEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFI 153
Query: 245 SACAHMGALDTGVW----VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD 300
AC+ G G W + +L ++ + + T L+D Y K GN+D A+ +FD++P+
Sbjct: 154 QACS--GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE 211
Query: 301 RDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL 360
+ V W MISG G +L+LF ++ + + PD V +ACS EG K
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFL-EGGKQ 270
Query: 361 LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSAC 420
+ Y +E + L+D + G A + + N N ++W LS
Sbjct: 271 IHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKN-----IISWTTLLSGY 325
Query: 421 CNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAASGRHA 460
+ + A S+ + +Y S L + + HA
Sbjct: 326 KQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA 365
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 163/516 (31%), Positives = 271/516 (52%), Gaps = 50/516 (9%)
Query: 10 TLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPT 69
T+++KC + Q+KQ + T+G +SF SR+L C+ G L++A ++F+ I P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 70 VCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSP------DNYTIPYALKACAALRDHSL 123
N II+ F + + + + +ML+ S D T + LKACA S
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 124 GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK 183
+ +H ++ GL D + +L+ Y GD+++A K+FDE+P SW+
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWN-------- 179
Query: 184 VGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
A+I+G V N E + L++ M+ I E V+
Sbjct: 180 -----------------------ALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAA 216
Query: 244 LSACAHMGALDTGVWV-HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP-DR 301
L AC+H+G + G + H Y N ++ +S + +DMY+KCG +D A ++F+ +
Sbjct: 217 LGACSHLGDVKEGENIFHGYSND-----NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKK 271
Query: 302 DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLL 361
+V WN MI+G A+HG+ AL++F ++E GIKPDD++++A TAC ++G+ GL +
Sbjct: 272 SVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVF 331
Query: 362 DKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACC 421
+ M + +E +HYGC+VDLLSR G EA II S + + + W++ L A
Sbjct: 332 NNM-ACKGVERNMKHYGCVVDLLSRAGRLREAHDII----CSMSMIPDPVLWQSLLGASE 386
Query: 422 NHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGC 480
+ ++A +A+ + + N G +VL+SN+YAA GR DV RVRD M++K+V K PG
Sbjct: 387 IYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGL 446
Query: 481 SSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
S +E G + EF +K+H Q EI+ ++++ ++
Sbjct: 447 SYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKI 482
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/522 (29%), Positives = 270/522 (51%), Gaps = 48/522 (9%)
Query: 2 SSCSKRCLTLLEKC----KNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTY 57
SS S++ LL C ++ + H + +G D + F ++++ S GS+ Y
Sbjct: 73 SSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSD--LGSVDY 130
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
A KVF + + T+ + N + +A + G+ L ++ M R G+ D +T Y LKAC A
Sbjct: 131 ARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 118 LR---DHSL-GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVS 173
+H + G+ IH + ++ G +++ +L+ MY
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMY----------------------- 227
Query: 174 WSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLM--QLT 231
A+ G VD A F P ++ W AMI+ Y +N E L FR M +
Sbjct: 228 --------ARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETK 279
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
D P+ VS+L ACA + AL+ G +H Y+ R L + + ++L+ MY +CG L++
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVG 339
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYS 351
+R+FD M DRD+V WN++IS +HG G A+++F EM G P +TF++V ACS+
Sbjct: 340 QRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHE 399
Query: 352 GMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETL 411
G+ EG +L + M+ + ++P+ EHY C+VDLL R +EA +++ +
Sbjct: 400 GLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPK---- 455
Query: 412 AWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMK 470
W + L +C HG +LA A+ L L+ +G YVL++++YA + +V+RV+ +++
Sbjct: 456 VWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLE 515
Query: 471 NKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
++ + K PG +E+ + F++ ++ +P M++IH+ L K+
Sbjct: 516 HRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKL 557
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/523 (30%), Positives = 266/523 (50%), Gaps = 59/523 (11%)
Query: 10 TLLEKCKNMKQL---KQAHAQVFTSG-LDNNSF---ALSRVLAFCSHPHQGSLTYACKVF 62
++L C +++ L K+ HA +G LD NSF AL + C G +VF
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGR-----RVF 361
Query: 63 QRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRN-GLSPDNYTIPYALKACAALRDH 121
+ + + N +I + N + L +F M + GL ++ T+ + AC
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 122 SLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGY 181
S E IHG+ K GL D FV N+L+ MY
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMY------------------------------- 450
Query: 182 AKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQ-----------L 230
+++G +D+A F + ++D W MI+GYV + ++ L L MQ
Sbjct: 451 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 510
Query: 231 TDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDL 290
+ P+ ++IL +CA + AL G +H Y + L + + ++L+DMYAKCG L +
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 570
Query: 291 AKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSY 350
++++FD +P ++++ WN +I MHG+G A+ L M G+KP+++TFI+VF ACS+
Sbjct: 571 SRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 630
Query: 351 SGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEET 410
SGM EGL++ M Y +EP S+HY C+VDLL R G +EA ++ + N +
Sbjct: 631 SGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG-- 688
Query: 411 LAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVM 469
AW + L A H ++ +AA++L++L+ N + YVL++N+Y+++G VR M
Sbjct: 689 -AWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNM 747
Query: 470 KNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
K + V K PGCS +E V +F+AG+ +HPQ +++ LE +
Sbjct: 748 KEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 169/402 (42%), Gaps = 55/402 (13%)
Query: 16 KNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNT 75
++M+ KQ HA V+ G +S ++ L + G KVF RI N+
Sbjct: 111 QDMELGKQIHAHVYKFGYGVDSVTVANTLVNL-YRKCGDFGAVYKVFDRISERNQVSWNS 169
Query: 76 IIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAAL---RDHSLGEMIHGYSS 132
+I + L F ML + P ++T+ + AC+ L +G+ +H Y
Sbjct: 170 LISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGL 229
Query: 133 KLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARL 192
+ G L + F+ N+L+AMY K+G + +++
Sbjct: 230 RKGEL-NSFIINTLVAMY-------------------------------GKLGKLASSKV 257
Query: 193 FFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGA 252
+D W ++S QN E L R M L + PDE S+L AC+H+
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 253 LDTGVWVHRY-LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMIS 311
L TG +H Y L L + + ++L+DMY C + +R+FD M DR I WNAMI+
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 312 GLAMHGDGIGALKLFSEMEK-LGIKPDDITFIAVFTACSYSGMASEGLKL--------LD 362
G + + AL LF ME+ G+ + T V AC SG S + LD
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 363 KMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSN 404
+ V N L+D+ SR G + AM I ++ + +
Sbjct: 438 RDRFVQN---------TLMDMYSRLGKIDIAMRIFGKMEDRD 470
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 128/279 (45%), Gaps = 36/279 (12%)
Query: 86 LNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFD-IFVGN 144
L + + +M+ G+ PDNY P LKA A L+D LG+ IH + K G D + V N
Sbjct: 78 LREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVAN 137
Query: 145 SLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGI 204
+L+ +Y GD A KVF D E+++
Sbjct: 138 TLVNLYRKCGDFGAVYKVF-------------------------------DRISERNQVS 166
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMG---ALDTGVWVHR 261
W ++IS ++ L FR M ++ P VS+++AC+++ L G VH
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA 226
Query: 262 YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG 321
Y R + L+ + +L+ MY K G L +K L S RD+V WN ++S L + +
Sbjct: 227 YGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLE 285
Query: 322 ALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL 360
AL+ EM G++PD+ T +V ACS+ M G +L
Sbjct: 286 ALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 259/533 (48%), Gaps = 43/533 (8%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
++L+ CK+ L+ HAQ+ G+ ++ A L CS + S Y+ +F+ +
Sbjct: 33 ISLIHACKDTASLRHVHAQILRRGVLSSRVAAQ--LVSCSSLLK-SPDYSLSIFRNSEER 89
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
+ N +I+ N ++ F MLR G+ PD T P+ LK+ + L LG +H
Sbjct: 90 NPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALH 149
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL----SAVSWSLMISGYAKV 184
+ K + D FV SL+ MY G + A +VF+E P S + W+++I+GY +
Sbjct: 150 AATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRA 209
Query: 185 GDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDI----------- 233
D+ +A F PE++ G W +I GYV + LF LM ++
Sbjct: 210 KDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFS 269
Query: 234 --------------------GPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIR 273
P+E ++LSAC+ GAL +G+ +H Y+ + L
Sbjct: 270 QTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRA 329
Query: 274 LSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLG 333
+ T+L+DMYAKCG LD A +F +M +DI+ W AMI G A+HG A++ F +M G
Sbjct: 330 IGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSG 389
Query: 334 IKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEA 393
KPD++ F+AV TAC S GL D M Y +EP +HY +VDLL R G EA
Sbjct: 390 EKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEA 449
Query: 394 MVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNP-SGLYVLISNL 452
++ + + + W A AC H + A +++L+ LD G Y+ +
Sbjct: 450 HELVENMPI----NPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKT 505
Query: 453 YAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEI 505
+A+ G DV + R ++ + +++ G S +E+DG + +F AG+ +H EI
Sbjct: 506 HASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEI 558
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 8/240 (3%)
Query: 235 PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRL 294
PDES F+S++ AC +L VH + R R LS R++ L+ + + D + +
Sbjct: 27 PDESHFISLIHACKDTASLRH---VHAQILR-RGVLSSRVAAQLVSCSSLLKSPDYSLSI 82
Query: 295 FDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMA 354
F + +R+ NA+I GL + +++ F M +LG+KPD +TF V + S G
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 355 SEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWR 414
G L + ++ S LVD+ ++TG + A + + E L W
Sbjct: 143 WLGRALHAATLKNF-VDCDSFVRLSLVDMYAKTGQLKHAFQVFEE-SPDRIKKESILIWN 200
Query: 415 AFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRV 474
++ C +AT S+ + SG + + Y SG +++ ++M K V
Sbjct: 201 VLINGYCRAKDMHMATTLFRSMP--ERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNV 258
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 163/514 (31%), Positives = 256/514 (49%), Gaps = 43/514 (8%)
Query: 9 LTLLEKCKNMKQLKQA---HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRI 65
++LL C + H+ GL++ F ++++ + G L KVF R+
Sbjct: 251 VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL--YAEFGRLRDCQKVFDRM 308
Query: 66 QHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGE 125
+ N+IIKA+ +N R + +F M + + PD T+ + L D
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR 368
Query: 126 MIHGYSSKLG-LLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKV 184
+ G++ + G L DI +GN+++ MY AK+
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMY-------------------------------AKL 397
Query: 185 GDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT-DIGPDESIFVSI 243
G VD AR F+ P D W +ISGY QN E + ++ +M+ +I ++ +VS+
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI 303
L AC+ GAL G+ +H L + L L + + TSL DMY KCG L+ A LF +P +
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDK 363
V WN +I+ HG G A+ LF EM G+KPD ITF+ + +ACS+SG+ EG +
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEM 577
Query: 364 MFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNH 423
M + Y + P +HYGC+VD+ R G E A+ I+ ++ + S W A LSAC H
Sbjct: 578 MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDAS----IWGALLSACRVH 633
Query: 424 GQAQLATLAAESLVRLDNPS-GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSS 482
G L +A+E L ++ G +VL+SN+YA++G+ V +R + K + K PG SS
Sbjct: 634 GNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSS 693
Query: 483 VEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
+E+D V F G +THP +E++ L + +L
Sbjct: 694 MEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKL 727
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 214/491 (43%), Gaps = 84/491 (17%)
Query: 10 TLLEKCKNMKQLKQAHAQ-VFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
TL C N++ K HA+ V + + N + V +C + G++ A F IQ+
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYC---YLGNVALARHTFDHIQNR 115
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFT-NMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
V N +I + GN + + F+ ML +GL+PD T P LKAC + D G I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKI 172
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
H + K G ++D++V SLI +Y S Y VG+
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLY----------------------------SRYKAVGN- 203
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
AR+ FDE P +D G W AMISGY Q+ KE L L ++ D VS+LSAC
Sbjct: 204 --ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSAC 257
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWN 307
G + GV +H Y + L + +S L+D+YA+ G L +++FD M RD++ WN
Sbjct: 258 TEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWN 317
Query: 308 AMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG--------------- 352
++I ++ + A+ LF EM I+PD +T I++ + S G
Sbjct: 318 SIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRK 377
Query: 353 --------------MASEGLKLLDKMFSVYNMEPKSE--HYGCLVDLLSRTGFFEEAMVI 396
+ L L+D +V+N P ++ + ++ ++ GF EA+ +
Sbjct: 378 GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEM 437
Query: 397 IRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLI------S 450
+ + W + L AC G + L++ +GLY+ + +
Sbjct: 438 YNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK----NGLYLDVFVVTSLA 493
Query: 451 NLYAASGRHAD 461
++Y GR D
Sbjct: 494 DMYGKCGRLED 504
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 150/501 (29%), Positives = 264/501 (52%), Gaps = 41/501 (8%)
Query: 16 KNMKQLKQAHAQVFTSGL-DNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICN 74
+N+ KQ H+ SGL D+ +L + A CS GS+ KVF R++ +V
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSA--DGSVDDCRKVFDRMEDHSVMSWT 340
Query: 75 TIIKAFLINGNL-NRTLHVFTNMLRNG-LSPDNYTIPYALKACAALRDHSLGEMIHGYSS 132
+I ++ N NL +++F+ M+ G + P+++T A KAC L D +G+ + G +
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 133 KLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARL 192
K GL + V NS+I+M+ M A++ F+ + + VS++ + G + + + A
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460
Query: 193 FFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGA 252
E E++ G+ S + F S+LS A++G+
Sbjct: 461 LLSEITERELGV-----SAFT--------------------------FASLLSGVANVGS 489
Query: 253 LDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISG 312
+ G +H + + L + + +L+ MY+KCG++D A R+F+ M +R+++ W +MI+G
Sbjct: 490 IRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITG 549
Query: 313 LAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEP 372
A HG I L+ F++M + G+KP+++T++A+ +ACS+ G+ SEG + + M+ + ++P
Sbjct: 550 FAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKP 609
Query: 373 KSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLA 432
K EHY C+VDLL R G +A I N+ + L WR FL AC H +L LA
Sbjct: 610 KMEHYACMVDLLCRAGLLTDAFEFI----NTMPFQADVLVWRTFLGACRVHSNTELGKLA 665
Query: 433 AESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVME 491
A ++ LD N Y+ +SN+YA +G+ + +R MK + + K GCS +E+ + +
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHK 725
Query: 492 FIAGEKTHPQMDEIHSILEKM 512
F G+ HP +I+ L+++
Sbjct: 726 FYVGDTAHPNAHQIYDELDRL 746
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 130/512 (25%), Positives = 216/512 (42%), Gaps = 85/512 (16%)
Query: 10 TLLEKC---KNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQ--- 63
+LL+ C ++ + K HA++ ++ +S + +++ + G A VF+
Sbjct: 67 SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISL--YSKSGDSAKAEDVFETMR 124
Query: 64 RIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSL 123
R V + ++ + NG + VF L GL P++Y ++AC+ +
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 124 GEMIHGYSSKLG-LLFDIFVGNSLIAMYCVFGD--MVAARKVFDEIPSLSAVSWSLMISG 180
G + G+ K G D+ VG SLI M+ V G+ A KVFD++ L+ V+W+LMI+
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMF-VKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 181 YAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIF 240
++G P +E + F M L+ D+
Sbjct: 244 CMQMG-----------FP--------------------REAIRFFLDMVLSGFESDKFTL 272
Query: 241 VSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKC---GNLDLAKRLFDS 297
S+ SACA + L G +H + R+ L + SL+DMYAKC G++D +++FD
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 298 MPDRDIVCWNAMISGLAMHGD-GIGALKLFSEMEKLG-IKPDDITFIAVFTACSYSGMAS 355
M D ++ W A+I+G + + A+ LFSEM G ++P+ TF + F AC
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390
Query: 356 EGLKLLDKMF------------SVYNMEPKSEH------------------YGCLVDLLS 385
G ++L + F SV +M KS+ Y +D
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 386 RTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD---NP 442
R FE+A ++ IT G + + LS N G + +V+L N
Sbjct: 451 RNLNFEQAFKLLSEITERELGV-SAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 509
Query: 443 SGLYVLISNLYAASGRHADVRRVRDVMKNKRV 474
LIS +Y+ G RV + M+N+ V
Sbjct: 510 PVCNALIS-MYSKCGSIDTASRVFNFMENRNV 540
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 163/379 (43%), Gaps = 42/379 (11%)
Query: 52 QGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYA 111
+ S A KVF ++ V +I + G + F +M+ +G D +T+
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 112 LKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYC---VFGDMVAARKVFDEIPS 168
ACA L + SLG+ +H ++ + GL+ D V SL+ MY G + RKVFD +
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 169 LSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLF-RL 227
S +SW+ +I+GY K + +LA E + LF +
Sbjct: 334 HSVMSWTALITGYMK--NCNLA----------------------------TEAINLFSEM 363
Query: 228 MQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGN 287
+ + P+ F S AC ++ G V + L + ++ S++ M+ K
Sbjct: 364 ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 423
Query: 288 LDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTA 347
++ A+R F+S+ ++++V +N + G + + A KL SE+ + + TF ++ +
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483
Query: 348 CSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGS 407
+ G +G ++ ++ + + L+ + S+ G + A + + N N
Sbjct: 484 VANVGSIRKGEQIHSQVVKL-GLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN--- 539
Query: 408 EETLAWRAFLSACCNHGQA 426
++W + ++ HG A
Sbjct: 540 --VISWTSMITGFAKHGFA 556
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 43/287 (14%)
Query: 72 ICNTIIKAFLINGNLNRTLHVFTNMLRNGLSP-DNYTIPYALKACAALRDHSLGEMIHGY 130
+ + +I L G+L + M R+G+ P D+ T LK+C RD LG+++H
Sbjct: 28 VADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHAR 87
Query: 131 SSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL---SAVSWSLMISGYAKVG-D 186
+ + D + NSLI++Y GD A VF+ + VSWS M++ Y G +
Sbjct: 88 LIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRE 147
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG--PDESIFVSIL 244
+D ++F ++ ++G P++ + +++
Sbjct: 148 LDAIKVF----------------------------------VEFLELGLVPNDYCYTAVI 173
Query: 245 SACAHMGALDTG-VWVHRYLNRARLPLSIRLSTSLLDMYAKCGN-LDLAKRLFDSMPDRD 302
AC++ + G V + + + + SL+DM+ K N + A ++FD M + +
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN 233
Query: 303 IVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
+V W MI+ G A++ F +M G + D T +VF+AC+
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 12/204 (5%)
Query: 227 LMQLTDIGPDESI-FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKC 285
LM I P +S+ F S+L +C G VH L + L SL+ +Y+K
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110
Query: 286 GNLDLAKRLFDSMP---DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFI 342
G+ A+ +F++M RD+V W+AM++ +G + A+K+F E +LG+ P+D +
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170
Query: 343 AVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC-LVDLLSR-TGFFEEAMVIIRRI 400
AV ACS S G L + + E GC L+D+ + FE A + ++
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDV-CVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 401 TNSNNGSEETLAWRAFLSACCNHG 424
+ N + W ++ C G
Sbjct: 230 SELN-----VVTWTLMITRCMQMG 248
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/471 (31%), Positives = 255/471 (54%), Gaps = 14/471 (2%)
Query: 19 KQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIK 78
K K+ HA + +G + ++L H G L+YA +VF + PT+ N +I
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLIL--HLKCGCLSYARQVFDELPKPTLSAYNYMIS 108
Query: 79 AFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA-----LRDHSLGEMIHGYSSK 133
+L +G + L + M +G D YT+ LKA + + SL ++H K
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIK 168
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
+ D + +L+ Y G + +AR VF+ + + V + MISGY G V+ A
Sbjct: 169 CDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEI 228
Query: 194 FDETPEKDKGIWGAMISGYVQN-NCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGA 252
F+ T KD ++ AM+ G+ ++ K + ++ MQ P+ S F S++ AC+ + +
Sbjct: 229 FNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTS 288
Query: 253 LDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISG 312
+ G VH + ++ + I++ +SLLDMYAKCG ++ A+R+FD M ++++ W +MI G
Sbjct: 289 HEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDG 348
Query: 313 LAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEP 372
+G+ AL+LF+ M++ I+P+ +TF+ +ACS+SG+ +G ++ + M Y+M+P
Sbjct: 349 YGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKP 408
Query: 373 KSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLA 432
K EHY C+VDL+ R G +A R + + W A LS+C HG +LA++A
Sbjct: 409 KMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSD----IWAALLSSCNLHGNVELASIA 464
Query: 433 AESLVRL--DNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCS 481
A L +L D G Y+ +SN+YA++ + +V ++R+VMK +R+ K G S
Sbjct: 465 ASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 27/267 (10%)
Query: 99 NGLSPDNYTIPYALKACAALRDH------SLGEMIHGYSSKLGLLFDIFVGNSLIAMYCV 152
+ LSP Y AL++H G+ IH K G D+ + L+ ++
Sbjct: 29 SSLSPAKYI-------AGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLK 81
Query: 153 FGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDE---TPEKDKGIWGAMI 209
G + AR+VFDE+P + +++ MISGY K G V L + EK G +M+
Sbjct: 82 CGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMV 141
Query: 210 --SGYVQNNCFKEGLYLFRLMQLT----DIGPDESIFVSILSACAHMGALDTGVWVHRYL 263
+ + + L RL+ D+ D+ + +++ G L++ V +
Sbjct: 142 LKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETM 201
Query: 264 NRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG-A 322
++ TS++ Y G ++ A+ +F++ +DIV +NAM+ G + G+ +
Sbjct: 202 KDE----NVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRS 257
Query: 323 LKLFSEMEKLGIKPDDITFIAVFTACS 349
+ ++ M++ G P+ TF +V ACS
Sbjct: 258 VDMYISMQRAGFHPNISTFASVIGACS 284
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/469 (33%), Positives = 248/469 (52%), Gaps = 9/469 (1%)
Query: 49 HPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGL-SPDNYT 107
H G + A F+++ + N++I F G R L +F+ MLR+ L SPD +T
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Query: 108 IPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDE-- 165
+ L ACA L +G+ IH + G V N+LI+MY G + AR++ ++
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 166 IPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLF 225
L ++ ++ GY K+GD++ A+ F ++D W AMI GY Q+ + E + LF
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401
Query: 226 RLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKC 285
R M P+ ++LS + + +L G +H ++ S+ +S +L+ MYAK
Sbjct: 402 RSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461
Query: 286 GNLDLAKRLFDSMP-DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAV 344
GN+ A R FD + +RD V W +MI LA HG AL+LF M G++PD IT++ V
Sbjct: 462 GNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521
Query: 345 FTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSN 404
F+AC+++G+ ++G + D M V + P HY C+VDL R G +EA I ++
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPI-- 579
Query: 405 NGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVR 463
+ + W + LSAC H L +AAE L+ L+ SG Y ++NLY+A G+ +
Sbjct: 580 --EPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAA 637
Query: 464 RVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
++R MK+ RV K G S +E+ V F + THP+ +EI+ ++K+
Sbjct: 638 KIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKI 686
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 224/482 (46%), Gaps = 55/482 (11%)
Query: 36 NSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTN 95
+F+ + VL+ ++ +G + C+ F ++ T+I + G ++ + V +
Sbjct: 79 TAFSWNTVLS--AYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD 136
Query: 96 MLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGD 155
M++ G+ P +T+ L + AA R G+ +H + KLGL ++ V NSL+ MY GD
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 156 MVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQN 215
+ A+ VFD + SW+ MI+ + +VG +DLA F++ E+D W +MISG+ Q
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 216 NCFKEGLYLF-RLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYL----------- 263
L +F ++++ + + PD S+LSACA++ L G +H ++
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316
Query: 264 ----------------------NRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR 301
R L I T+LLD Y K G+++ AK +F S+ DR
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 302 DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLL 361
D+V W AMI G HG A+ LF M G +P+ T A+ + S S G ++
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 362 D---KMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLS 418
K +Y++ + L+ + ++ G A R + +T++W + +
Sbjct: 437 GSAVKSGEIYSVSVSN----ALITMYAKAGNITSA----SRAFDLIRCERDTVSWTSMII 488
Query: 419 ACCNHGQAQLATLAAESL----VRLDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRV 474
A HG A+ A E++ +R D+ + YV + + +G R+ D+MK+ V
Sbjct: 489 ALAQHGHAEEALELFETMLMEGLRPDHIT--YVGVFSACTHAGLVNQGRQYFDMMKD--V 544
Query: 475 DK 476
DK
Sbjct: 545 DK 546
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 135/258 (52%), Gaps = 32/258 (12%)
Query: 124 GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK 183
+++H K GL+F +++ N+L+ +Y G + ARK+FDE+P +A SW+ ++S Y+K
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 184 VGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
GD+D FFD+ P++D W MI GY + + + + M I P + ++
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGN---------------- 287
L++ A ++TG VH ++ + L ++ +S SLL+MYAKCG+
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 288 ---------------LDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKL 332
+DLA F+ M +RDIV WN+MISG G + AL +FS+M +
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 333 G-IKPDDITFIAVFTACS 349
+ PD T +V +AC+
Sbjct: 273 SLLSPDRFTLASVLSACA 290
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 177/445 (39%), Gaps = 113/445 (25%)
Query: 10 TLLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCS------------------ 48
++L C N+++L KQ H+ + T+G D + L+ +++ S
Sbjct: 284 SVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK 343
Query: 49 -------------HPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTN 95
+ G + A +F ++ V +I + +G+ +++F +
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRS 403
Query: 96 MLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGD 155
M+ G P++YT+ L ++L S G+ IHG + K G ++ + V N+LI MY G+
Sbjct: 404 MVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGN 463
Query: 156 MVAARKVFDEIP-SLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQ 214
+ +A + FD I VSW+ MI A+ G +
Sbjct: 464 ITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE-------------------------- 497
Query: 215 NNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRL 274
E L LF M + + PD +V + SAC H G ++ G +Y + + I
Sbjct: 498 -----EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQG---RQYFDMMKDVDKIIP 549
Query: 275 STS----LLDMYAKCGNLDLAKRLFDSMP-DRDIVCWNAMISGLAMHGDGIGALKLFSEM 329
+ S ++D++ + G L A+ + MP + D+V W +++S +H +
Sbjct: 550 TLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKN----------- 598
Query: 330 EKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPK-SEHYGCLVDLLSRTG 388
+A+E L LL EP+ S Y L +L S G
Sbjct: 599 ------------------IDLGKVAAERLLLL---------EPENSGAYSALANLYSACG 631
Query: 389 FFEEAMVIIRRITNSNNGSEETLAW 413
+EEA I + + + E+ +W
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFSW 656
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/510 (31%), Positives = 253/510 (49%), Gaps = 45/510 (8%)
Query: 1 MSSCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACK 60
+S+CS+ L LE+ K + H + G + + + S ++ + L A +
Sbjct: 215 ISACSR--LLWLERGKEI------HRKCVKKGFELDEYVNSALVDM--YGKCDCLEVARE 264
Query: 61 VFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRD 120
VFQ++ ++ N++IK ++ G+ + + M+ G P T+ L AC+ R+
Sbjct: 265 VFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRN 324
Query: 121 HSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISG 180
G+ IHGY + + DI+V SLI +Y G+ A VF + A SW++MIS
Sbjct: 325 LLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISS 384
Query: 181 YAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIF 240
Y VG+ W + Y Q M + PD F
Sbjct: 385 YISVGN------------------WFKAVEVYDQ-------------MVSVGVKPDVVTF 413
Query: 241 VSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD 300
S+L AC+ + AL+ G +H ++ +RL L ++LLDMY+KCGN A R+F+S+P
Sbjct: 414 TSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK 473
Query: 301 RDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL 360
+D+V W MIS HG AL F EM+K G+KPD +T +AV +AC ++G+ EGLK
Sbjct: 474 KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKF 533
Query: 361 LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSAC 420
+M S Y +EP EHY C++D+L R G EA II++ +++ +E SAC
Sbjct: 534 FSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAE---LLSTLFSAC 590
Query: 421 CNHGQAQLATLAAESLVR-LDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPG 479
C H + L A LV + + Y+++ NLYA+ RRVR MK + K PG
Sbjct: 591 CLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPG 650
Query: 480 CSSVEIDGVVMEFIAGEKTHPQMDEIHSIL 509
CS +E+ V F A +++H + + ++ L
Sbjct: 651 CSWIEMSDKVCHFFAEDRSHLRAENVYECL 680
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 165/360 (45%), Gaps = 53/360 (14%)
Query: 5 SKRCLTLLEKC----KNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACK 60
S + L+LL +C K+++++K H ++ T GL + ++ ++ + CK
Sbjct: 3 SSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLI---------NVYFTCK 53
Query: 61 -------VFQRIQ-HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLS-PDNYTIPYA 111
VF+ V I N+++ + N + TL VF +L + PD++T P
Sbjct: 54 DHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNV 113
Query: 112 LKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSA 171
+KA AL LG MIH K G + D+ V +SL+ MY F + +VFDE+P
Sbjct: 114 IKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDV 173
Query: 172 VSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
SW+ +IS + + G+ + A L LF M+ +
Sbjct: 174 ASWNTVISCFYQSGEAEKA-------------------------------LELFGRMESS 202
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
P+ +SAC+ + L+ G +HR + L ++++L+DMY KC L++A
Sbjct: 203 GFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVA 262
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYS 351
+ +F MP + +V WN+MI G GD +++ + M G +P T ++ ACS S
Sbjct: 263 REVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 165/505 (32%), Positives = 253/505 (50%), Gaps = 38/505 (7%)
Query: 10 TLLEKCKNMKQLK---QAHAQVFTSGLDNNS---FALSRVLAFCS-------------HP 50
T+L+ C ++ LK Q HAQ+ G++ +S +L V A C P
Sbjct: 192 TVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREP 251
Query: 51 HQGSLT-----YA-CK-------VFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNML 97
SL+ YA C +F R + V + N++I ++ N N+ V N +
Sbjct: 252 DDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIAN-NMKMEALVLFNEM 310
Query: 98 RNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMV 157
RN D+ T+ + AC L G+ +H ++ K GL+ DI V ++L+ MY G +
Sbjct: 311 RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPM 370
Query: 158 AARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNC 217
A K+F E+ S + + MI Y G +D A+ F+ K W +M +G+ QN C
Sbjct: 371 EACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGC 430
Query: 218 FKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTS 277
E L F M D+ DE S++SACA + +L+ G V L +S+S
Sbjct: 431 TVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSS 490
Query: 278 LLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPD 337
L+D+Y KCG ++ +R+FD+M D V WN+MISG A +G G A+ LF +M GI+P
Sbjct: 491 LIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPT 550
Query: 338 DITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVII 397
ITF+ V TAC+Y G+ EG KL + M + P EH+ C+VDLL+R G+ EEA+ ++
Sbjct: 551 QITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLV 610
Query: 398 RRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGL-YVLISNLYAAS 456
+ +GS W + L C +G + AAE ++ L+ + + YV +S ++A S
Sbjct: 611 EEMPFDVDGS----MWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATS 666
Query: 457 GRHADVRRVRDVMKNKRVDKAPGCS 481
G VR +M+ V K PG S
Sbjct: 667 GDWESSALVRKLMRENNVTKNPGSS 691
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 198/408 (48%), Gaps = 47/408 (11%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G L+ A ++F + V N+++ +++NG L +F + S D T+ L
Sbjct: 138 GELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVL 194
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
KACA L G+ IH G+ D + +SL+ +Y GD+ A + ++I
Sbjct: 195 KACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDH 254
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
S S +ISGYA G V+ +R FD + +W +MISGY+ NN E L LF M+ +
Sbjct: 255 SLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NE 313
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGN----- 287
D ++++AC +G L+TG +H + + L I ++++LLDMY+KCG+
Sbjct: 314 TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEAC 373
Query: 288 --------------------------LDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG 321
+D AKR+F+ + ++ ++ WN+M +G + +G +
Sbjct: 374 KLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVE 433
Query: 322 ALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMF---SVYNMEPKSEHYG 378
L+ F +M KL + D+++ +V +AC+ + L+L +++F ++ ++
Sbjct: 434 TLEYFHQMHKLDLPTDEVSLSSVISACA----SISSLELGEQVFARATIVGLDSDQVVSS 489
Query: 379 CLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
L+DL + GF E RR+ ++ S+E + W + +S +GQ
Sbjct: 490 SLIDLYCKCGFVEHG----RRVFDTMVKSDE-VPWNSMISGYATNGQG 532
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 135/312 (43%), Gaps = 67/312 (21%)
Query: 112 LKACAALRDHSLGEMIHGYSSKLGLLFDI-FVGNSLIAMYCVFGDMVAARKVFDEIPSLS 170
L++C++ +L +G K G L I V N L+ MY G M AR +FDE+P +
Sbjct: 33 LQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRN 92
Query: 171 AVSWSLMISGY-------------------------------AKVGDVDLARLFFDETPE 199
SW+ MI GY AK G++ +AR F+ PE
Sbjct: 93 YFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPE 152
Query: 200 KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWV 259
KD +++ GY+ N +E L LF+ + + D ++L ACA + AL G +
Sbjct: 153 KDVVTLNSLLHGYILNGYAEEALRLFKELNFS---ADAITLTTVLKACAELEALKCGKQI 209
Query: 260 HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA---------------------------- 291
H + + ++++SL+++YAKCG+L +A
Sbjct: 210 HAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRV 269
Query: 292 ---KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTAC 348
+ LFD +R ++ WN+MISG + + AL LF+EM + D T AV AC
Sbjct: 270 NESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETREDSRTLAAVINAC 328
Query: 349 SYSGMASEGLKL 360
G G ++
Sbjct: 329 IGLGFLETGKQM 340
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 248/480 (51%), Gaps = 6/480 (1%)
Query: 11 LLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTV 70
L+E ++ L Q HA++ TSG +S R+L S G +Y +++ I +
Sbjct: 28 LVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLK--SSSRFGDSSYTVSIYRSIGK--L 83
Query: 71 CICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGY 130
N + KA+L++ + + L + ++LR G PD+YT + G+M HG
Sbjct: 84 YCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQ 143
Query: 131 SSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLA 190
+ K G + V NSL+ MY G + A+K+F EIP VSW+ +I+G + GDV A
Sbjct: 144 AIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAA 203
Query: 191 RLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHM 250
FDE P+K+ W MIS Y+ N + LFR M +ES V +L+AC
Sbjct: 204 HKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRS 263
Query: 251 GALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMI 310
L G VH L R L S+ + T+L+DMY KC + LA+R+FDS+ R+ V WN MI
Sbjct: 264 ARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMI 323
Query: 311 SGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNM 370
+HG G L+LF M ++PD++TF+ V C+ +G+ S+G M + +
Sbjct: 324 LAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQI 383
Query: 371 EPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLAT 430
+P H C+ +L S GF EEA ++ + + + E T W LS+ G L
Sbjct: 384 KPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPEST-KWANLLSSSRFTGNPTLGE 442
Query: 431 LAAESLVRLDNPS-GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVV 489
A+SL+ D + Y L+ N+Y+ +GR DV RVR+++K +++ + PGC V++ +V
Sbjct: 443 SIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIV 502
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/512 (31%), Positives = 255/512 (49%), Gaps = 43/512 (8%)
Query: 11 LLEKCKNMKQLK---QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH 67
LL C + + L+ + HA + + ++ +R+L F + L A KV +
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIF--YGKCDCLEDARKVLDEMPE 115
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
V +I + G+ + L VF M+R+ P+ +T L +C LG+ I
Sbjct: 116 KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQI 175
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
HG K IFVG+SL+ MY AK G +
Sbjct: 176 HGLIVKWNYDSHIFVGSSLLDMY-------------------------------AKAGQI 204
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
AR F+ PE+D A+I+GY Q +E L +F + + P+ + S+L+A
Sbjct: 205 KEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWN 307
+ + LD G H ++ R LP L SL+DMY+KCGNL A+RLFD+MP+R + WN
Sbjct: 265 SGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWN 324
Query: 308 AMISGLAMHGDGIGALKLFSEM-EKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
AM+ G + HG G L+LF M ++ +KPD +T +AV + CS+ M GL + D M +
Sbjct: 325 AMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 384
Query: 367 -VYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQ 425
Y +P +EHYGC+VD+L R G +EA I+R+ + + L AC H
Sbjct: 385 GEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAG----VLGSLLGACRVHLS 440
Query: 426 AQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVE 484
+ L+ ++ +G YV++SNLYA++GR ADV VR +M K V K PG S ++
Sbjct: 441 VDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQ 500
Query: 485 IDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
+ + F A ++THP+ +E+ + ++++ +++
Sbjct: 501 HEQTLHYFHANDRTHPRREEVLAKMKEISIKM 532
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 127/302 (42%), Gaps = 47/302 (15%)
Query: 10 TLLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
T+L C L KQ H + D++ F S +L + G + A ++F+ +
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDM--YAKAGQIKEAREIFECLP 215
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACA--ALRDHSLG 124
V C II + G L +F + G+SP+ T L A + AL DH G
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH--G 273
Query: 125 EMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKV 184
+ H + + L F + NSLI MY G++ AR++FD +P +A+SW+ M+ GY+K
Sbjct: 274 KQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKH 333
Query: 185 GDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQ-LTDIGPDESIFVSI 243
G L R E L LFRLM+ + PD +++
Sbjct: 334 G---LGR----------------------------EVLELFRLMRDEKRVKPDAVTLLAV 362
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTS----LLDMYAKCGNLDLAKRLFDSMP 299
LS C+H DTG+ + + + T ++DM + G +D A MP
Sbjct: 363 LSGCSHGRMEDTGLNI--FDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMP 420
Query: 300 DR 301
+
Sbjct: 421 SK 422
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 39/282 (13%)
Query: 227 LMQLTDIGPDESI--FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAK 284
L+++ +GP+ + ++L+AC AL G VH ++ + R + L T LL Y K
Sbjct: 40 LLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGK 99
Query: 285 CGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAV 344
C L+ A+++ D MP++++V W AMIS + G AL +F+EM + KP++ TF V
Sbjct: 100 CDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATV 159
Query: 345 FTAC-------------------SYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLV--DL 383
T+C +Y G LLD ++ E + CL D+
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV 219
Query: 384 LSRT---------GFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAE 434
+S T G EEA+ + R+ +S S + + + L+A A
Sbjct: 220 VSCTAIIAGYAQLGLDEEALEMFHRL-HSEGMSPNYVTYASLLTALSGLALLDHGKQAHC 278
Query: 435 SLVRLDNPSGLYVLISN----LYAASGRHADVRRVRDVMKNK 472
++R + P Y ++ N +Y+ G + RR+ D M +
Sbjct: 279 HVLRRELP--FYAVLQNSLIDMYSKCGNLSYARRLFDNMPER 318
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/504 (29%), Positives = 262/504 (51%), Gaps = 38/504 (7%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH- 67
+ +L+ C +MK+L++ H+ V +GL ++ + +L FC+ GSL++A +F
Sbjct: 9 VRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSD 68
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLS-PDNYTIPYALKACAALRDHSLGEM 126
P+ N +I+ F + + ++ + ML + +S PD +T +ALK+C ++
Sbjct: 69 PSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLE 128
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
IHG + G L D V SL+ Y + G
Sbjct: 129 IHGSVIRSGFLDDAIVATSLVRCY-------------------------------SANGS 157
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
V++A FDE P +D W MI + + L +++ M + D V++LS+
Sbjct: 158 VEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSS 217
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
CAH+ AL+ GV +HR R + +S +L+DMYAKCG+L+ A +F+ M RD++ W
Sbjct: 218 CAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTW 277
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
N+MI G +HG G+ A+ F +M G++P+ ITF+ + CS+ G+ EG++ + M S
Sbjct: 278 NSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSS 337
Query: 367 VYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
+++ P +HYGC+VDL R G E ++ +I +++ E+ + WR L +C H
Sbjct: 338 QFHLTPNVKHYGCMVDLYGRAGQLENSLEMIY----ASSCHEDPVLWRTLLGSCKIHRNL 393
Query: 427 QLATLAAESLVRLDN-PSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEI 485
+L +A + LV+L+ +G YVL++++Y+A+ +R ++++ + PG S +EI
Sbjct: 394 ELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEI 453
Query: 486 DGVVMEFIAGEKTHPQMDEIHSIL 509
V +F+ +K HP+ I+S L
Sbjct: 454 GDQVHKFVVDDKMHPESAVIYSEL 477
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/510 (29%), Positives = 262/510 (51%), Gaps = 48/510 (9%)
Query: 13 EKCKNMKQLKQAHAQVFTSGLDNNSFALSRVL-AFCSHPH-QGSLTYACKVFQRIQHPTV 70
++C +KQ+K H+ GL N++A+S++L AF P+ YA +F I+ P
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 71 CICNTIIKAFLINGNLNRTLHVFTNMLRN---GLSPDNYTIPYALKACAALRDHSLGEMI 127
+ +T+I+ + + L F M++ ++P T + + AC S+G+ I
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQI 138
Query: 128 HGYSSKLGL-LFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
H + K G+ L D V ++ +Y V + +FD
Sbjct: 139 HCWVVKNGVFLSDGHVQTGVLRIY------VEDKLLFD---------------------- 170
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
AR FDE P+ D W +++GYV+ EGL +F+ M + I PDE + L+A
Sbjct: 171 ---ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTA 227
Query: 247 CAHMGALDTGVWVHRYLNRAR-LPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVC 305
CA +GAL G W+H ++ + R + + + T+L+DMYAKCG ++ A +F+ + R++
Sbjct: 228 CAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFS 287
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKL-GIKPDDITFIAVFTACSYSGMASEGLKLLDKM 364
W A+I G A +G A +E+ GIKPD + + V AC++ G EG +L+ M
Sbjct: 288 WAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENM 347
Query: 365 FSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
+ Y + PK EHY C+VDL+ R G ++A+ +I ++ S W A L+ C H
Sbjct: 348 EARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLAS----VWGALLNGCRTHK 403
Query: 425 QAQLATLAAESLVRL-----DNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPG 479
+L LA ++L+ L + V +SN+Y + R+ + +VR +++ + + K PG
Sbjct: 404 NVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPG 463
Query: 480 CSSVEIDGVVMEFIAGEKTHPQMDEIHSIL 509
S +E+DG+V +F++G+ +HP + +IH+++
Sbjct: 464 WSLLEVDGIVTKFVSGDVSHPNLLQIHTLI 493
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/506 (30%), Positives = 252/506 (49%), Gaps = 40/506 (7%)
Query: 10 TLLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
TLL+ N + L +Q HA V +GL +N+ + ++ + G L A +VF ++
Sbjct: 189 TLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNM--YVKCGWLVGAKRVFDQMA 246
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
C ++ + G L +F +++ G+ D++ LKACA+L + +LG+
Sbjct: 247 VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQ 306
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
IH +KLGL ++ VG L+ Y +A + F EI + VSWS +ISGY ++
Sbjct: 307 IHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQ 366
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
+ A F K+ I + + SI A
Sbjct: 367 FEEAVKTFKSLRSKNASILNSF------------------------------TYTSIFQA 396
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
C+ + + G VH + L S ++L+ MY+KCG LD A +F+SM + DIV W
Sbjct: 397 CSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAW 456
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
A ISG A +G+ AL+LF +M G+KP+ +TFIAV TACS++G+ +G LD M
Sbjct: 457 TAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLR 516
Query: 367 VYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
YN+ P +HY C++D+ +R+G +EA+ ++ + + ++W+ FLS C H
Sbjct: 517 KYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDA----MSWKCFLSGCWTHKNL 572
Query: 427 QLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEI 485
+L +A E L +LD + YVL NLY +G+ + + +M + + K CS ++
Sbjct: 573 ELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQE 632
Query: 486 DGVVMEFIAGEKTHPQMDEIHSILEK 511
G + FI G+K HPQ EI+ L++
Sbjct: 633 KGKIHRFIVGDKHHPQTQEIYEKLKE 658
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 166/383 (43%), Gaps = 40/383 (10%)
Query: 64 RIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSL 123
+I H + N + + + LN M + G+S +Y+ +AC LR S
Sbjct: 42 KISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSH 101
Query: 124 GEMIHGYSSKLGLLF-DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYA 182
G ++H ++G+ + + N ++ MYC + A K+FDE+ L+AVS + MIS YA
Sbjct: 102 GRLLHD-RMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYA 160
Query: 183 KVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVS 242
+ G +D A + LF M + P S++ +
Sbjct: 161 EQGILDKA-------------------------------VGLFSGMLASGDKPPSSMYTT 189
Query: 243 ILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRD 302
+L + + ALD G +H ++ RA L + + T +++MY KCG L AKR+FD M +
Sbjct: 190 LLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKK 249
Query: 303 IVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLD 362
V ++ G G ALKLF ++ G++ D F V AC+ + G K +
Sbjct: 250 PVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG-KQIH 308
Query: 363 KMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCN 422
+ +E + LVD + FE A + I N+ ++W A +S C
Sbjct: 309 ACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND-----VSWSAIISGYCQ 363
Query: 423 HGQAQLATLAAESLVRLDNPSGL 445
Q + A +SL R N S L
Sbjct: 364 MSQFEEAVKTFKSL-RSKNASIL 385
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 192/466 (41%), Gaps = 57/466 (12%)
Query: 1 MSSCSKRCLTLLEKCKNMKQLKQAHAQVFTS----GLDNNSFALSRVL--AFCSHPHQGS 54
+SS S +CL E C+ ++ L +H ++ G++N S L + +C S
Sbjct: 81 VSSYSYQCL--FEACRELRSL--SHGRLLHDRMRMGIENPSVLLQNCVLQMYCECR---S 133
Query: 55 LTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKA 114
L A K+F + T+I A+ G L++ + +F+ ML +G P + LK+
Sbjct: 134 LEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKS 193
Query: 115 CAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSW 174
R G IH + + GL + + ++ MY G +V A++VFD++ V+
Sbjct: 194 LVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAC 253
Query: 175 SLMISGYAKVGDV-DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDI 233
+ ++ GY + G D +LF D E +
Sbjct: 254 TGLMVGYTQAGRARDALKLFVDLVTE--------------------------------GV 281
Query: 234 GPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKR 293
D +F +L ACA + L+ G +H + + L + + T L+D Y KC + + A R
Sbjct: 282 EWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACR 341
Query: 294 LFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEME-KLGIKPDDITFIAVFTACSYSG 352
F + + + V W+A+ISG A+K F + K + T+ ++F ACS
Sbjct: 342 AFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLA 401
Query: 353 MASEGLKLLDKMFSVYNMEPKSEHYG--CLVDLLSRTGFFEEAMVIIRRITNSNNGSEET 410
+ G ++ + YG L+ + S+ G ++A + + N +
Sbjct: 402 DCNIGGQVHADAIKRSLI---GSQYGESALITMYSKCGCLDDANEVFESMDNPD-----I 453
Query: 411 LAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAAS 456
+AW AF+S +G A A E +V I+ L A S
Sbjct: 454 VAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACS 499
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 158/497 (31%), Positives = 246/497 (49%), Gaps = 40/497 (8%)
Query: 19 KQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIK 78
KQLK+ HA V +G + L+++L + G + YA +VF + P + + NT+ K
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLE--NLVVIGDMCYARQVFDEMHKPRIFLWNTLFK 82
Query: 79 AFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLF 138
++ N +L ++ M G+ PD +T P+ +KA + L D S G +H + K G
Sbjct: 83 GYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGC 142
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
V L+ MY FG++ +A F+
Sbjct: 143 LGIVATELVMMYMKFGELSSAE-------------------------------FLFESMQ 171
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVW 258
KD W A ++ VQ L F M + D VS+LSAC +G+L+ G
Sbjct: 172 VKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEE 231
Query: 259 VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGD 318
++ + + +I + + LDM+ KCGN + A+ LF+ M R++V W+ MI G AM+GD
Sbjct: 232 IYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGD 291
Query: 319 GIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSV--YNMEPKSEH 376
AL LF+ M+ G++P+ +TF+ V +ACS++G+ +EG + M N+EP+ EH
Sbjct: 292 SREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEH 351
Query: 377 YGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESL 436
Y C+VDLL R+G EEA I+++ +T W A L AC H L A+ L
Sbjct: 352 YACMVDLLGRSGLLEEAYEFIKKMPV----EPDTGIWGALLGACAVHRDMILGQKVADVL 407
Query: 437 VRLDNPSGLY-VLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAG 495
V G Y VL+SN+YAA+G+ V +VR M+ K SSVE +G + F G
Sbjct: 408 VETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRG 467
Query: 496 EKTHPQMDEIHSILEKM 512
+K+HPQ I+ L+++
Sbjct: 468 DKSHPQSKAIYEKLDEI 484
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 163/475 (34%), Positives = 243/475 (51%), Gaps = 44/475 (9%)
Query: 14 KCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCIC 73
K +++ KQ H V G ++ + + ++ F + G ACKVF + V
Sbjct: 118 KFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHF--YGVCGESRNACKVFGEMPVRDVVSW 175
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
II F G L F+ M + P+ T L + + SLG+ IHG K
Sbjct: 176 TGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILK 232
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
L + GN+LI MY + A +VF E+
Sbjct: 233 RASLISLETGNALIDMYVKCEQLSDAMRVFGELE-------------------------- 266
Query: 194 FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD-IGPDESIFVSILSACAHMGA 252
+KDK W +MISG V KE + LF LMQ + I PD I S+LSACA +GA
Sbjct: 267 -----KKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGA 321
Query: 253 LDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISG 312
+D G WVH Y+ A + + T+++DMYAKCG ++ A +F+ + +++ WNA++ G
Sbjct: 322 VDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGG 381
Query: 313 LAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS-VYNME 371
LA+HG G+ +L+ F EM KLG KP+ +TF+A AC ++G+ EG + KM S YN+
Sbjct: 382 LAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLF 441
Query: 372 PKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQ-AQLAT 430
PK EHYGC++DLL R G +EA+ +++ + + A LSAC N G +L
Sbjct: 442 PKLEHYGCMIDLLCRAGLLDEALELVKAMPV----KPDVRICGAILSACKNRGTLMELPK 497
Query: 431 LAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVE 484
+S + ++ SG+YVL+SN++AA+ R DV R+R +MK K + K PG S +E
Sbjct: 498 EILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 211/475 (44%), Gaps = 47/475 (9%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
L L+ +C +++ KQ Q+ T L + +++V+ F + +Y+ + I+
Sbjct: 10 LELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFA-SYSSVILHSIRSV 68
Query: 69 TVCIC-NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
NT++ ++ + T+ + + NG SPD +T P KAC G+ I
Sbjct: 69 LSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQI 128
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
HG +K+G DI+V NSL+ Y V G+ A KVF E+P VSW+ +I+G+ + G
Sbjct: 129 HGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTG-- 186
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
+KE L F M D+ P+ + +V +L +
Sbjct: 187 -----------------------------LYKEALDTFSKM---DVEPNLATYVCVLVSS 214
Query: 248 AHMGALDTGVWVHRY-LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
+G L G +H L RA L +S+ +L+DMY KC L A R+F + +D V W
Sbjct: 215 GRVGCLSLGKGIHGLILKRASL-ISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSW 273
Query: 307 NAMISGLAMHGDGIGALKLFSEME-KLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMF 365
N+MISGL A+ LFS M+ GIKPD +V +AC+ G G + + +
Sbjct: 274 NSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHG-RWVHEYI 332
Query: 366 SVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQ 425
++ + +VD+ ++ G+ E A+ I I + N W A L HG
Sbjct: 333 LTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKN-----VFTWNALLGGLAIHGH 387
Query: 426 AQLATLAAESLVRLDNPSGLYVLISNLYAA--SGRHADVRRVRDVMKNKRVDKAP 478
+ E +V+L L ++ L A +G + RR MK++ + P
Sbjct: 388 GLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFP 442
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 251/519 (48%), Gaps = 59/519 (11%)
Query: 10 TLLEKCKNMKQLK---QAHAQVFTSGL--DNNSFALSRVLAFCSHPHQGSLTYACKVFQR 64
++++ C N+K+L+ Q H V G D N R ++ ++ A ++F+
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI----RTALMVAYSKCTAMLDALRLFKE 355
Query: 65 IQHPTVCICNTI-----IKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALR 119
I C+ N + I FL N + +F+ M R G+ P+ +T L A +
Sbjct: 356 IG----CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS 411
Query: 120 DHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMIS 179
+H K VG +L+
Sbjct: 412 PSE----VHAQVVKTNYERSSTVGTALL-------------------------------D 436
Query: 180 GYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
Y K+G V+ A F +KD W AM++GY Q + + +F + I P+E
Sbjct: 437 AYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFT 496
Query: 240 FVSILSACAHMGA-LDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM 298
F SIL+ CA A + G H + ++RL S+ +S++LL MYAK GN++ A+ +F
Sbjct: 497 FSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 299 PDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGL 358
++D+V WN+MISG A HG + AL +F EM+K +K D +TFI VF AC+++G+ EG
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 359 KLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLS 418
K D M + P EH C+VDL SR G E+AM +I + N + WR L+
Sbjct: 617 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGST----IWRTILA 672
Query: 419 ACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKA 477
AC H + +L LAAE ++ + S YVL+SN+YA SG + +VR +M + V K
Sbjct: 673 ACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKE 732
Query: 478 PGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
PG S +E+ F+AG+++HP D+I+ LE + +L
Sbjct: 733 PGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRL 771
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 175/414 (42%), Gaps = 54/414 (13%)
Query: 22 KQAHAQVFTSG-LDNNSFALSRVLAFCSHPHQGS-LTYACKVFQRIQHPTVCICNTIIKA 79
+Q H Q G LD+ S S V + +GS KVF ++ V T+I
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYM----KGSNFKDGRKVFDEMKERNVVTWTTLISG 168
Query: 80 FLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFD 139
+ N + L +F M G P+++T AL A G +H K GL
Sbjct: 169 YARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228
Query: 140 IFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPE 199
I V NSLI +Y K G+V AR+ FD+T
Sbjct: 229 IPVSNSLINLYL-------------------------------KCGNVRKARILFDKTEV 257
Query: 200 KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWV 259
K W +MISGY N E L +F M+L + ES F S++ CA++ L +
Sbjct: 258 KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQL 317
Query: 260 HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP-DRDIVCWNAMISGLAMHGD 318
H + + + T+L+ Y+KC + A RLF + ++V W AMISG +
Sbjct: 318 HCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG 377
Query: 319 GIGALKLFSEMEKLGIKPDDITFIAVFTA---CSYSGMASEGLKLLDKMFSVYNMEPKSE 375
A+ LFSEM++ G++P++ T+ + TA S S + ++ +K N E S
Sbjct: 378 KEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKT--------NYERSST 429
Query: 376 HYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
L+D + G EEA + I + ++ +AW A L+ G+ + A
Sbjct: 430 VGTALLDAYVKLGKVEEAAKVFSGIDD-----KDIVAWSAMLAGYAQTGETEAA 478
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 120/275 (43%), Gaps = 31/275 (11%)
Query: 75 TIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKL 134
+++ F +G +F N+ R G+ D LK A L D G +H K
Sbjct: 63 SLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKF 122
Query: 135 GLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFF 194
G L D+ VG SL+ Y + RKVFD
Sbjct: 123 GFLDDVSVGTSLVDTYMKGSNFKDGRKVFD------------------------------ 152
Query: 195 DETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALD 254
E E++ W +ISGY +N+ E L LF MQ P+ F + L A G
Sbjct: 153 -EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 211
Query: 255 TGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLA 314
G+ VH + + L +I +S SL+++Y KCGN+ A+ LFD + +V WN+MISG A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 315 MHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
+G + AL +F M ++ + +F +V C+
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCA 306
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 27/253 (10%)
Query: 185 GDVDLARLF-----FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
G V +RL+ FD++P +D+ + +++ G+ ++ +E LF + + D SI
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
F S+L A + G +H + + + TSL+D Y K N +++FD M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK 359
+R++V W +ISG A + L LF M+ G +P+ TF A + G+ GL+
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 360 L--------LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETL 411
+ LDK V N L++L + G +A RI + +
Sbjct: 216 VHTVVVKNGLDKTIPVSN---------SLINLYLKCGNVRKA-----RILFDKTEVKSVV 261
Query: 412 AWRAFLSACCNHG 424
W + +S +G
Sbjct: 262 TWNSMISGYAANG 274
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 150/510 (29%), Positives = 260/510 (50%), Gaps = 48/510 (9%)
Query: 13 EKCKNMKQLKQAHAQVFTSGLDNNSFALSRVL-AFCSHPH-QGSLTYACKVFQRIQHPTV 70
++C +KQ+K H+ GL N++A+S++L AF P+ YA +F I+ P
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 71 CICNTIIKAFLINGNLNRTLHVFTNMLRN---GLSPDNYTIPYALKACAALRDHSLGEMI 127
+ +T+I+ + + L F M++ ++P T + + AC S+G+ I
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQI 138
Query: 128 HGYSSKLGL-LFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
H + K G+ L D V ++ +Y ++ ARKVFD
Sbjct: 139 HCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFD---------------------- 176
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
E P+ D W +++GYV+ EGL +FR M + + PDE + L+A
Sbjct: 177 ---------EIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTA 227
Query: 247 CAHMGALDTGVWVHRYLNR-ARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVC 305
CA +GAL G W+H ++ + + + + + T+L+DMYAKCG ++ A +F + R++
Sbjct: 228 CAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFS 287
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKL-GIKPDDITFIAVFTACSYSGMASEGLKLLDKM 364
W A+I G A +G A+ +E+ GIKPD + + V AC++ G EG +L+ M
Sbjct: 288 WAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENM 347
Query: 365 FSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
+ Y + PK EHY C+VDL+ R G ++A+ +I ++ S W A L+ C H
Sbjct: 348 EARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLAS----VWGALLNGCRTHK 403
Query: 425 QAQLATLAAESLVRL-----DNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPG 479
+L LA ++L+ L + V +SN+Y + R+ + +VR +++ + V K PG
Sbjct: 404 NVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPG 463
Query: 480 CSSVEIDGVVMEFIAGEKTHPQMDEIHSIL 509
S +E+DG V +F++G+ +HP + +IH+++
Sbjct: 464 WSVLEVDGNVTKFVSGDVSHPNLLQIHTVI 493
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 231/417 (55%), Gaps = 13/417 (3%)
Query: 75 TIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSS-- 132
T + A+ + L R LH ++ ++ D++T + LKA + R SL I +
Sbjct: 92 TPLHAYFLYDQLQR-LHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTL 150
Query: 133 KLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARL 192
KLG ++V +L+ MY V G+M+ A KVFDE+P + V+W++MI+G +GD + A
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 193 FFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD-IGPDESIFVSILSACAHMG 251
F ++ P + W +I GY + + KE + LF M D I P+E ++IL A ++G
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 252 ALDTGVWVHRYL-NRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD--RDIVCWNA 308
L VH Y+ R +P IR++ SL+D YAKCG + A + F +P+ +++V W
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 309 MISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEG-LKLLDKMFSV 367
MIS A+HG G A+ +F +ME+LG+KP+ +T I+V ACS+ G+A E L+ + M +
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 368 YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
Y + P +HYGCLVD+L R G EEA I I E+ + WR L AC + A+
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPI----EEKAVVWRMLLGACSVYDDAE 446
Query: 428 LATLAAESLVRLDNP-SGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSV 483
LA L+ L+ G YVL+SN++ +GR D +R R M + V K PG S V
Sbjct: 447 LAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 162/498 (32%), Positives = 241/498 (48%), Gaps = 43/498 (8%)
Query: 23 QAHAQVFTSGLDNNSFA---LSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKA 79
Q H S L N+ A L + A C G L A +VF +I+ P N II
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARC-----GFLNSARRVFDQIERPDTASWNVIIAG 345
Query: 80 FLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFD 139
NG + + VF+ M +G PD ++ L A S G IH Y K G L D
Sbjct: 346 LANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLAD 405
Query: 140 IFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPE 199
+ V NSL+ MY D+ +F+ D
Sbjct: 406 LTVCNSLLTMYTFCSDLYCCFNLFE------------------------------DFRNN 435
Query: 200 KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWV 259
D W +++ +Q+ E L LF+LM +++ PD ++L C + +L G V
Sbjct: 436 ADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQV 495
Query: 260 HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDG 319
H Y + L + L+DMYAKCG+L A+R+FDSM +RD+V W+ +I G A G G
Sbjct: 496 HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFG 555
Query: 320 IGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC 379
AL LF EM+ GI+P+ +TF+ V TACS+ G+ EGLKL M + + + P EH C
Sbjct: 556 EEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSC 615
Query: 380 LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRL 439
+VDLL+R G EA R + + + W+ LSAC G LA AAE+++++
Sbjct: 616 VVDLLARAGRLNEA----ERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKI 671
Query: 440 DN-PSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKT 498
D S +VL+ +++A+SG + +R MK V K PG S +EI+ + F A +
Sbjct: 672 DPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIF 731
Query: 499 HPQMDEIHSILEKMHLQL 516
HP+ D+I+++L + Q+
Sbjct: 732 HPERDDIYTVLHNIWSQM 749
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 181/417 (43%), Gaps = 51/417 (12%)
Query: 16 KNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNT 75
+++ Q ++ H + S ++ + +L+ + GSL A +VF + + +
Sbjct: 81 RSLAQGRKIHDHILNSNCKYDTILNNHILSM--YGKCGSLRDAREVFDFMPERNLVSYTS 138
Query: 76 IIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLG 135
+I + NG + ++ ML+ L PD + +KACA+ D LG+ +H KL
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198
Query: 136 LLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFD 195
+ N+LIAMY F M A +VF IP
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPM--------------------------- 231
Query: 196 ETPEKDKGIWGAMISGYVQNNCFKEGL-YLFRLMQLTDIGPDESIFVSILSACAHMGALD 254
KD W ++I+G+ Q E L +L ++ P+E IF S L AC+ + D
Sbjct: 232 ----KDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 287
Query: 255 TGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLA 314
G +H ++ L + SL DMYA+CG L+ A+R+FD + D WN +I+GLA
Sbjct: 288 YGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA 347
Query: 315 MHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKS 374
+G A+ +FS+M G PD I+ ++ A + S+G+++ +
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-------- 399
Query: 375 EHYGCLVD------LLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQ 425
+G L D LL+ F + + N + ++++W L+AC H Q
Sbjct: 400 --WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA-DSVSWNTILTACLQHEQ 453
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 19/261 (7%)
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPD 236
++S Y K G + AR FD PE++ + ++I+GY QN E + L+ M D+ PD
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 237 ESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFD 296
+ F SI+ ACA + G +H + + + +L+ MY + + A R+F
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFY 227
Query: 297 SMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGI-KPDDITFIAVFTACSYSGMAS 355
+P +D++ W+++I+G + G AL EM G+ P++ F + ACS
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS------ 281
Query: 356 EGLKLLDKMFSVYNMEPKSEHYG------CLVDLLSRTGFFEEAMVIIRRITNSNNGSEE 409
L D ++ + KSE G L D+ +R GF A + +I +
Sbjct: 282 -SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP-----D 335
Query: 410 TLAWRAFLSACCNHGQAQLAT 430
T +W ++ N+G A A
Sbjct: 336 TASWNVIIAGLANNGYADEAV 356
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/480 (29%), Positives = 237/480 (49%), Gaps = 68/480 (14%)
Query: 5 SKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQR 64
+K TLL C ++ ++++ H +F S R+L
Sbjct: 47 NKLLATLLSNCTSLARVRRIHGDIFRS----------RILD------------------- 77
Query: 65 IQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLG 124
Q+P + N I+++++ + + + V+ M+R+ + PD Y++P +KA + D +LG
Sbjct: 78 -QYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLG 136
Query: 125 EMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKV 184
+ +H + +LG + D F + I +YC K
Sbjct: 137 KELHSVAVRLGFVGDEFCESGFITLYC-------------------------------KA 165
Query: 185 GDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSIL 244
G+ + AR FDE PE+ G W A+I G E + +F M+ + + PD+ VS+
Sbjct: 166 GEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVT 225
Query: 245 SACAHMGALDTGVWVHRYLNRARLPLS--IRLSTSLLDMYAKCGNLDLAKRLFDSMPDRD 302
++C +G L +H+ + +A+ I + SL+DMY KCG +DLA +F+ M R+
Sbjct: 226 ASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRN 285
Query: 303 IVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLD 362
+V W++MI G A +G+ + AL+ F +M + G++P+ ITF+ V +AC + G+ EG
Sbjct: 286 VVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFA 345
Query: 363 KMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCN 422
M S + +EP HYGC+VDLLSR G +EA ++ + N + W + C
Sbjct: 346 MMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPN----VMVWGCLMGGCEK 401
Query: 423 HGQAQLATLAAESLVRLDN-PSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCS 481
G ++A A +V L+ G+YV+++N+YA G DV RVR +MK K+V K P S
Sbjct: 402 FGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 248 bits (633), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 159/515 (30%), Positives = 254/515 (49%), Gaps = 42/515 (8%)
Query: 7 RCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
+CL L+ C ++K L Q H Q+ S L N+SF +S ++ S L +A +
Sbjct: 15 QCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSS 74
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
T N + + + + + ++ V++ M R G+ P+ T P+ LKACA+ + G
Sbjct: 75 DSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQ 134
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
I K G FD++VGN+LI +Y ARKVFDE+ + VSW+ +++ + G
Sbjct: 135 IQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGK 194
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
++L CF E M PDE+ V +LSA
Sbjct: 195 LNLV------------------------FECFCE-------MIGKRFCPDETTMVVLLSA 223
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
C G L G VH + L L+ RL T+L+DMYAK G L+ A+ +F+ M D+++ W
Sbjct: 224 CG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTW 281
Query: 307 NAMISGLAMHGDGIGALKLFSEMEK-LGIKPDDITFIAVFTACSYSGMASEGLKLLDKMF 365
+AMI GLA +G AL+LFS+M K ++P+ +TF+ V ACS++G+ +G K +M
Sbjct: 282 SAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEME 341
Query: 366 SVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQ 425
++ ++P HYG +VD+L R G EA I+++ + + WR LSAC H
Sbjct: 342 KIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDA----VVWRTLLSACSIHHD 397
Query: 426 AQ---LATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCS 481
+ + L+ L+ SG V+++N +A + A+ VR VMK ++ K G S
Sbjct: 398 EDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGES 457
Query: 482 SVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
+E+ G F +G + I+ +L+ QL
Sbjct: 458 CLELGGSFHRFFSGYDPRSEYVSIYELLDLFKFQL 492
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 251/470 (53%), Gaps = 12/470 (2%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLN-RTLHVFTNMLRNG-LSPDNYTIPY 110
G+ ++A +VF + H +++ A L NL+ +TL VF+++ + L PD++
Sbjct: 52 GAASHALQVFDEMPHRDHIAWASVLTA-LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSA 110
Query: 111 ALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLS 170
+KACA L G +H + D V +SL+ MY G + +A+ VFD I +
Sbjct: 111 LVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKN 170
Query: 171 AVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQL 230
+SW+ M+SGYAK G + A F P K+ W A+ISG+VQ+ E +F M+
Sbjct: 171 TISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRR 230
Query: 231 TDIGP-DESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLD 289
+ D + SI+ ACA++ A G VH + + +S +L+DMYAKC ++
Sbjct: 231 ERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVI 290
Query: 290 LAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
AK +F M RD+V W ++I G+A HG AL L+ +M G+KP+++TF+ + ACS
Sbjct: 291 AAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACS 350
Query: 350 YSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEE 409
+ G +G +L M Y + P +HY CL+DLL R+G +EA +I + + E
Sbjct: 351 HVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPD--EP 408
Query: 410 TLAWRAFLSACCNHGQAQLATLAAESLV---RLDNPSGLYVLISNLYAASGRHADVRRVR 466
T W A LSAC G+ Q+ A+ LV +L +PS Y+L+SN+YA++ V R
Sbjct: 409 T--WAALLSACKRQGRGQMGIRIADHLVSSFKLKDPS-TYILLSNIYASASLWGKVSEAR 465
Query: 467 DVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
+ V K PG SSVE+ F AGE +HP ++I +L+K+ ++
Sbjct: 466 RKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEM 515
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 158/387 (40%), Gaps = 84/387 (21%)
Query: 110 YALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL 169
+ L+ CA R + + +H + KLG++ + N+L+ +Y G A +VFDE+P
Sbjct: 8 HQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHR 67
Query: 170 SAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQ 229
++W+ +++ + A +SG K +
Sbjct: 68 DHIAWASVLTALNQ-----------------------ANLSG-------KTLSVFSSVGS 97
Query: 230 LTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLD 289
+ + PD+ +F +++ ACA++G++D G VH + + + +SL+DMYAKCG L+
Sbjct: 98 SSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLN 157
Query: 290 LAKRLFDS-------------------------------MPDRDIVCWNAMISGLAMHGD 318
AK +FDS +P +++ W A+ISG G
Sbjct: 158 SAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGK 217
Query: 319 GIGALKLFSEMEKLGIKP-DDITFIAVFTAC-----SYSGMASEGLKL---LDKMFSVYN 369
G+ A +F+EM + + D + ++ AC S +G GL + D + N
Sbjct: 218 GLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISN 277
Query: 370 MEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
L+D+ ++ A I R+ + + ++W + + HGQA+ A
Sbjct: 278 ---------ALIDMYAKCSDVIAAKDIFSRMRH-----RDVVSWTSLIVGMAQHGQAEKA 323
Query: 430 TLAAESLVRLDNPSGLYVLISNLYAAS 456
+ +V + +YA S
Sbjct: 324 LALYDDMVSHGVKPNEVTFVGLIYACS 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 9/237 (3%)
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
++ L CA L T +H ++ + + L+ +L+++Y KCG A ++FD MP
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 300 DRDIVCWNAMISGLAMHG-DGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGL 358
RD + W ++++ L G S G++PDD F A+ AC+ G G
Sbjct: 66 HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG- 124
Query: 359 KLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLS 418
+ + F V LVD+ ++ G A + I N T++W A +S
Sbjct: 125 RQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKN-----TISWTAMVS 179
Query: 419 ACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVD 475
G+ + A L ++ + N LIS + SG+ + V M+ +RVD
Sbjct: 180 GYAKSGRKEEA-LELFRILPVKNLYSWTALISG-FVQSGKGLEAFSVFTEMRRERVD 234
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 170/571 (29%), Positives = 265/571 (46%), Gaps = 79/571 (13%)
Query: 10 TLLEKCKN---MKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
TLL C + + Q HA G D N F + S+ L AC +F+ I
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAAL-------- 118
NT+I + +G ++H+F M ++G P ++T LKA L
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 119 -----------RDHSLGEMIHGYSSK------LGLLFDI-----FVG-NSLIAMYCVFGD 155
RD S+G I + SK +LFD FV N +I+ Y
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 156 MVAARKVFDEIP---------------------------------SLSAVSWSLMISG-- 180
A+ F E+ +L A + S++ G
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNS 391
Query: 181 ----YAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPD 236
YAK + A L F P++ W A+ISGYVQ GL LF M+ +++ D
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRAD 451
Query: 237 ESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFD 296
+S F ++L A A +L G +H ++ R+ ++ + L+DMYAKCG++ A ++F+
Sbjct: 452 QSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFE 511
Query: 297 SMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASE 356
MPDR+ V WNA+IS A +GDG A+ F++M + G++PD ++ + V TACS+ G +
Sbjct: 512 EMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQ 571
Query: 357 GLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAF 416
G + M +Y + PK +HY C++DLL R G F EA ++ + + + W +
Sbjct: 572 GTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEA----EKLMDEMPFEPDEIMWSSV 627
Query: 417 LSACCNHGQAQLATLAAESLVRLDN--PSGLYVLISNLYAASGRHADVRRVRDVMKNKRV 474
L+AC H LA AAE L ++ + YV +SN+YAA+G VR V+ M+ + +
Sbjct: 628 LNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
Query: 475 DKAPGCSSVEIDGVVMEFIAGEKTHPQMDEI 505
K P S VE++ + F + ++THP DEI
Sbjct: 688 KKVPAYSWVEVNHKIHVFSSNDQTHPNGDEI 718
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 107/219 (48%), Gaps = 4/219 (1%)
Query: 133 KLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARL 192
K G D N ++ G + AARKV+DE+P + VS + MISG+ K GDV AR
Sbjct: 41 KTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARD 100
Query: 193 FFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD--IGPDESIFVSILSACAHM 250
FD P++ W ++ Y +N+ F E LFR M + PD F ++L C
Sbjct: 101 LFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDA 160
Query: 251 GALDTGVWVHRYLNRARLPLSIRLSTS--LLDMYAKCGNLDLAKRLFDSMPDRDIVCWNA 308
+ VH + + + L+ S LL Y + LDLA LF+ +P++D V +N
Sbjct: 161 VPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNT 220
Query: 309 MISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTA 347
+I+G G ++ LF +M + G +P D TF V A
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 153/389 (39%), Gaps = 59/389 (15%)
Query: 49 HPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNG--LSPDNY 106
H G ++ A +F + TV ++ + N + + +F M R+ PD+
Sbjct: 89 HVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 107 TIPYALKACA-ALRDHSLGEMIHGYSSKLGLLFDIF--VGNSLIAMYCVFGDMVAARKVF 163
T L C A+ +++G+ +H ++ KLG + F V N L+ YC + A +F
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQ-VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLF 207
Query: 164 DEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLY 223
+EIP +V+++ +I+GY K G + E ++
Sbjct: 208 EEIPEKDSVTFNTLITGYEKDG-------------------------------LYTESIH 236
Query: 224 LFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYA 283
LF M+ + P + F +L A + G +H + +LD Y+
Sbjct: 237 LFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYS 296
Query: 284 KCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIA 343
K + + LFD MP+ D V +N +IS + +L F EM+ +G + F
Sbjct: 297 KHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFAT 356
Query: 344 VFTACSYSGMASEGLKL--------LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMV 395
+ + + G +L D + V N LVD+ ++ FEEA +
Sbjct: 357 MLSIAANLSSLQMGRQLHCQALLATADSILHVGN---------SLVDMYAKCEMFEEAEL 407
Query: 396 IIRRITNSNNGSEETLAWRAFLSACCNHG 424
I + + T++W A +S G
Sbjct: 408 IFKSLPQRT-----TVSWTALISGYVQKG 431
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/501 (30%), Positives = 258/501 (51%), Gaps = 39/501 (7%)
Query: 18 MKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTII 77
+ LK+ H N + +A S+ GSL+YA +VF I+ TV N +I
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVA--SYAKCGSLSYAQRVFHGIRSKTVNSWNALI 468
Query: 78 KAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLL 137
+ + +L M +GL PD++T+ L AC+ L+ LG+ +HG+ + L
Sbjct: 469 GGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 528
Query: 138 FDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDET 197
D+FV S++++Y G++ + +FD + S VSW+ +I+GY + G
Sbjct: 529 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNG-----------F 577
Query: 198 PEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGV 257
P++ G++ M+ LY +L ++ + + AC+ + +L G
Sbjct: 578 PDRALGVFRQMV------------LYGIQLCGIS--------MMPVFGACSLLPSLRLGR 617
Query: 258 WVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHG 317
H Y + L ++ SL+DMYAK G++ + ++F+ + ++ WNAMI G +HG
Sbjct: 618 EAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHG 677
Query: 318 DGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHY 377
A+KLF EM++ G PDD+TF+ V TAC++SG+ EGL+ LD+M S + ++P +HY
Sbjct: 678 LAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHY 737
Query: 378 GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLV 437
C++D+L R G ++A+ R + + + W++ LS+C H ++ A L
Sbjct: 738 ACVIDMLGRAGQLDKAL---RVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 794
Query: 438 RL--DNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAG 495
L + P YVL+SNLYA G+ DVR+VR M + K GCS +E++ V F+ G
Sbjct: 795 ELEPEKPEN-YVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVG 853
Query: 496 EKTHPQMDEIHSILEKMHLQL 516
E+ +EI S+ + +++
Sbjct: 854 ERFLDGFEEIKSLWSILEMKI 874
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 161/342 (47%), Gaps = 39/342 (11%)
Query: 14 KCKNMKQLKQAHAQVFTSG-LDNNSFALSRVL---AFCSHPHQGSLTYACKVFQRIQHPT 69
K K+++ ++ H V S L N+ +R++ A C P VF ++
Sbjct: 96 KRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRF-----VFDALRSKN 150
Query: 70 VCICNTIIKAFLINGNLNRTLHVFTNMLRN-GLSPDNYTIPYALKACAALRDHSLGEMIH 128
+ N +I ++ N + L F M+ L PD++T P +KACA + D +G +H
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 210
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVD 188
G K GL+ D+FVGN+L++ Y G + A ++FD +P + VSW+ MI ++ G +
Sbjct: 211 GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSE 270
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
+ L E E++ +G ++ PD + V++L CA
Sbjct: 271 ESFLLLGEMMEEN-----------------GDGAFM----------PDVATLVTVLPVCA 303
Query: 249 HMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNA 308
+ G VH + + RL + L+ +L+DMY+KCG + A+ +F ++++V WN
Sbjct: 304 REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNT 363
Query: 309 MISGLAMHGDGIGALKLFSEMEKLG--IKPDDITFIAVFTAC 348
M+ G + GD G + +M G +K D++T + C
Sbjct: 364 MVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 172/402 (42%), Gaps = 46/402 (11%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNG--LSPDNYTIPY 110
G +T A +F+ + V NT++ F G+ + T V ML G + D TI
Sbjct: 341 GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 400
Query: 111 ALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLS 170
A+ C + +H YS K +++ V N+ +A
Sbjct: 401 AVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVA---------------------- 438
Query: 171 AVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQL 230
YAK G + A+ F K W A+I G+ Q+N + L M++
Sbjct: 439 ---------SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 489
Query: 231 TDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDL 290
+ + PD S+LSAC+ + +L G VH ++ R L + + S+L +Y CG L
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 549
Query: 291 AKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSY 350
+ LFD+M D+ +V WN +I+G +G AL +F +M GI+ I+ + VF ACS
Sbjct: 550 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL 609
Query: 351 SGMASEGLKLLDKMFSVYNMEPKSEHYGC-LVDLLSRTGFFEEAMVIIRRITNSNNGSEE 409
+ S L +++ ++ C L+D+ ++ G ++ + NG +E
Sbjct: 610 --LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF-------NGLKE 660
Query: 410 --TLAWRAFLSACCNHGQAQLATLAAESLVRL-DNPSGLYVL 448
T +W A + HG A+ A E + R NP L L
Sbjct: 661 KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 22/248 (8%)
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLF-RLMQLTDIGP 235
+I+ YA G D +R FD K+ W A+IS Y +N + E L F ++ TD+ P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 236 DESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLF 295
D + ++ ACA M + G+ VH + + L + + +L+ Y G + A +LF
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 296 DSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEM-EKLG---IKPDDITFIAVFTACSYS 351
D MP+R++V WN+MI + +G + L EM E+ G PD T + V C+
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 352 -------GMASEGLKL-LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNS 403
G+ +KL LDK + N L+D+ S+ G A +I + N
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNN---------ALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 404 NNGSEETL 411
N S T+
Sbjct: 357 NVVSWNTM 364
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 149/481 (30%), Positives = 243/481 (50%), Gaps = 44/481 (9%)
Query: 10 TLLEKCKNMKQLKQA---HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
TL+ C + L Q H + SG++ +S ++ +L + G ++ A +VF
Sbjct: 247 TLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDM--YVKCGDISNARRVFNEHS 304
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
H + + +I + NG++N L +F M + P+ TI L C + + LG
Sbjct: 305 HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRS 364
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
+HG S K+G+ +D V N+L+ MY AK
Sbjct: 365 VHGLSIKVGI-WDTNVANALVHMY-------------------------------AKCYQ 392
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
A+ F+ EKD W ++ISG+ QN E L+LF M + P+ S+ SA
Sbjct: 393 NRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSA 452
Query: 247 CAHMGALDTGVWVHRYLNRARL--PLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIV 304
CA +G+L G +H Y + S+ + T+LLD YAKCG+ A+ +FD++ +++ +
Sbjct: 453 CASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTI 512
Query: 305 CWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKM 364
W+AMI G GD IG+L+LF EM K KP++ TF ++ +AC ++GM +EG K M
Sbjct: 513 TWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSM 572
Query: 365 FSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
+ YN P ++HY C+VD+L+R G E+A+ II ++ + + AFL C H
Sbjct: 573 YKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPI----QPDVRCFGAFLHGCGMHS 628
Query: 425 QAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSV 483
+ L + + ++ L + + YVL+SNLYA+ GR + VR++MK + + K G S++
Sbjct: 629 RFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688
Query: 484 E 484
E
Sbjct: 689 E 689
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 227/503 (45%), Gaps = 68/503 (13%)
Query: 3 SCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVF 62
+ S C LL KC N+ L+Q+H + +GL + +++++ + G A VF
Sbjct: 42 AASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSL--YGFFGYTKDARLVF 99
Query: 63 QRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHS 122
+I P + +++ + +N + ++ ++++G D+ ALKAC L+D
Sbjct: 100 DQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLD 159
Query: 123 LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYA 182
G+ IH K +PS V + ++ YA
Sbjct: 160 NGKKIHCQLVK--------------------------------VPSFDNVVLTGLLDMYA 187
Query: 183 KVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVS 242
K G++ A F++ ++ W +MI+GYV+N+ +EGL LF M+ ++ +E + +
Sbjct: 188 KCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGT 247
Query: 243 ILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRD 302
++ AC + AL G W H L ++ + LS L TSLLDMY KCG++ A+R+F+ D
Sbjct: 248 LIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVD 307
Query: 303 IVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYS-----GMASEG 357
+V W AMI G +G AL LF +M+ + IKP+ +T +V + C G + G
Sbjct: 308 LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHG 367
Query: 358 LKL------------LDKMFS----------VYNMEPKSE--HYGCLVDLLSRTGFFEEA 393
L + L M++ V+ ME + + + ++ S+ G EA
Sbjct: 368 LSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEA 427
Query: 394 MVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD--NPSGLYV--LI 449
+ + R+ NS + + + + SAC + G + + V+L S ++V +
Sbjct: 428 LFLFHRM-NSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTAL 486
Query: 450 SNLYAASGRHADVRRVRDVMKNK 472
+ YA G R + D ++ K
Sbjct: 487 LDFYAKCGDPQSARLIFDTIEEK 509
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 157/494 (31%), Positives = 234/494 (47%), Gaps = 40/494 (8%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
K HA++F + + S S +L + G A VF+ ++ + ++I
Sbjct: 393 KSVHAELFKRPIQSTSTIESALLTL--YSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLC 450
Query: 82 INGNLNRTLHVFTNMLRN--GLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFD 139
NG L VF +M + L PD+ + ACA L G +HG K GL+ +
Sbjct: 451 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLN 510
Query: 140 IFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPE 199
+FVG+SLI +Y G A KVF + + + V+
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA-------------------------- 544
Query: 200 KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWV 259
W +MIS Y +NN + + LF LM I PD S+L A + +L G +
Sbjct: 545 -----WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL 599
Query: 260 HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDG 319
H Y R +P L +L+DMY KCG A+ +F M + ++ WN MI G HGD
Sbjct: 600 HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDC 659
Query: 320 IGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC 379
I AL LF EM+K G PDD+TF+++ +AC++SG EG + + M Y +EP EHY
Sbjct: 660 ITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYAN 719
Query: 380 LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRL 439
+VDLL R G EEA I+ + + S W LSA H +L L+AE L+R+
Sbjct: 720 MVDLLGRAGLLEEAYSFIKAMPIEADSS----IWLCLLSASRTHHNVELGILSAEKLLRM 775
Query: 440 DNPSG-LYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKT 498
+ G YV + NLY +G + ++ +MK K + K PGCS +E+ F +G +
Sbjct: 776 EPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSS 835
Query: 499 HPQMDEIHSILEKM 512
P EI ++L ++
Sbjct: 836 SPMKAEIFNVLNRL 849
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 184/409 (44%), Gaps = 49/409 (11%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAF---CSHPHQGSLTYACKVFQRIQHPTVCICNTIIK 78
+Q H V GL N+ + + +L+ C + ++C V +R++ I N ++
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLE-----IWNAMVA 346
Query: 79 AFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLF 138
A+ N L +F M + + PD++T+ + C+ L ++ G+ +H K +
Sbjct: 347 AYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQS 406
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
+ ++L+ +Y G A VF + V+W +ISG K
Sbjct: 407 TSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCK--------------- 451
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD--IGPDESIFVSILSACAHMGALDTG 256
N FKE L +F M+ D + PD I S+ +ACA + AL G
Sbjct: 452 ----------------NGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFG 495
Query: 257 VWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMH 316
+ VH + + L L++ + +SL+D+Y+KCG ++A ++F SM ++V WN+MIS + +
Sbjct: 496 LQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRN 555
Query: 317 GDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEH 376
++ LF+ M GI PD ++ +V A S + +G L +++ P H
Sbjct: 556 NLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL--HGYTLRLGIPSDTH 613
Query: 377 Y-GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
L+D+ + GF + A I +++ + + + W + +HG
Sbjct: 614 LKNALIDMYVKCGFSKYAENIFKKMQH-----KSLITWNLMIYGYGSHG 657
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 160/355 (45%), Gaps = 44/355 (12%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSP---DNYTIPYALKACAALRDHSLGEMIHGY 130
N+ I+A + G + LH+++ +G SP +T P LKAC+AL + S G+ IHG
Sbjct: 28 NSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 131 SSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLA 190
LG +D F+ SL+ MY G + A +VFD WS SG +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFD--------GWSQSQSGVSA------- 130
Query: 191 RLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDE---SIFVSILSAC 247
+D +W +MI GY + FKEG+ FR M + + PD SI VS++
Sbjct: 131 ---------RDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR-DIVCW 306
+ + G +H ++ R L L T+L+DMY K G A R+F + D+ ++V W
Sbjct: 182 GNF-RREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
N MI G G +L L+ + +K +F ACS S + G ++
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQI---HCD 297
Query: 367 VYNMEPKSEHYGC--LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSA 419
V M ++ Y C L+ + S+ G EA + + + + W A ++A
Sbjct: 298 VVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVD-----KRLEIWNAMVAA 347
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 181/414 (43%), Gaps = 48/414 (11%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPT-VCICNTIIKAF 80
KQ H + + LD +SF + ++ + G A +VF I+ + V + N +I F
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDM--YFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGF 247
Query: 81 LINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDI 140
+G +L ++ N + + + AL AC+ + G IH K+GL D
Sbjct: 248 GGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDP 307
Query: 141 FVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEK 200
+V SL++MY G + A VF + W+ M++ YA E
Sbjct: 308 YVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA----------------EN 351
Query: 201 DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVH 260
D G L LF M+ + PD +++S C+ +G + G VH
Sbjct: 352 DYGY---------------SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVH 396
Query: 261 RYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGI 320
L + + + + ++LL +Y+KCG A +F SM ++D+V W ++ISGL +G
Sbjct: 397 AELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFK 456
Query: 321 GALKLFSEM--EKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS---VYNMEPKSE 375
ALK+F +M + +KPD +V AC+ GL++ M V N+ S
Sbjct: 457 EALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSS 516
Query: 376 HYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
L+DL S+ G E A+ + ++ +E +AW + +S + +L+
Sbjct: 517 ----LIDLYSKCGLPEMALKVFTSMS-----TENMVAWNSMISCYSRNNLPELS 561
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 178/432 (41%), Gaps = 50/432 (11%)
Query: 10 TLLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVF---- 62
+LL+ C + L K H V G + F + ++ + G L YA +VF
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNM--YVKCGFLDYAVQVFDGWS 122
Query: 63 ---QRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALR 119
+ V + N++I + + F ML G+ PD +++ +
Sbjct: 123 QSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEG 182
Query: 120 D--HSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLM 177
+ G+ IHG+ + L D F+ +LI MY FG + A +VF EI S V
Sbjct: 183 NFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV---- 238
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDE 237
+W MI G+ + + L L+ L + +
Sbjct: 239 --------------------------LWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVS 272
Query: 238 SIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDS 297
+ F L AC+ G +H + + L + TSLL MY+KCG + A+ +F
Sbjct: 273 TSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSC 332
Query: 298 MPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEG 357
+ D+ + WNAM++ A + G AL LF M + + PD T V + CS G+ + G
Sbjct: 333 VVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG 392
Query: 358 LKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFL 417
+ ++F ++ S L+ L S+ G +A ++ + + ++ +AW + +
Sbjct: 393 KSVHAELFK-RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEE-----KDMVAWGSLI 446
Query: 418 SACCNHGQAQLA 429
S C +G+ + A
Sbjct: 447 SGLCKNGKFKEA 458
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 229/474 (48%), Gaps = 52/474 (10%)
Query: 53 GSLTYACKVFQRIQHPT----VCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTI 108
G A ++F+++Q V + I + G L V ML +G+ P+ T+
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 109 PYALKACAALRDHSLGEMIHGYSSKLGLLF-------DIFVGNSLIAMYCVFGDMVAARK 161
L CA++ G+ IH Y+ K + + V N LI MY
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY----------- 417
Query: 162 VFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGI--WGAMISGYVQNNCFK 219
AK VD AR FD K++ + W MI GY Q+
Sbjct: 418 --------------------AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 220 EGLYLFRLMQLTD--IGPDESIFVSILSACAHMGALDTGVWVHRY-LNRARLPLSIRLST 276
+ L L M D P+ L ACA + AL G +H Y L + + + +S
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN 517
Query: 277 SLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKP 336
L+DMYAKCG++ A+ +FD+M ++ V W ++++G MHG G AL +F EM ++G K
Sbjct: 518 CLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKL 577
Query: 337 DDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVI 396
D +T + V ACS+SGM +G++ ++M +V+ + P EHY CLVDLL R G A+ +
Sbjct: 578 DGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRL 637
Query: 397 IRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRL-DNPSGLYVLISNLYAA 455
I + + W AFLS C HG+ +L AAE + L N G Y L+SNLYA
Sbjct: 638 IEEMPM----EPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYAN 693
Query: 456 SGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSIL 509
+GR DV R+R +M++K V K PGCS VE F G+KTHP EI+ +L
Sbjct: 694 AGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 217/458 (47%), Gaps = 37/458 (8%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
+ AHA +G +N F + ++A S SL+ A KVF + V N+II+++
Sbjct: 147 ESAHALSLVTGFISNVFVGNALVAMYSRCR--SLSDARKVFDEMSVWDVVSWNSIIESYA 204
Query: 82 INGNLNRTLHVFTNMLRN-GLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDI 140
G L +F+ M G PDN T+ L CA+L HSLG+ +H ++ ++ ++
Sbjct: 205 KLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNM 264
Query: 141 FVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV-DLARLFFDETPE 199
FVGN L+ MY G M A VF + VSW+ M++GY+++G D RLF E
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 200 K---DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTG 256
K D W A ISGY Q E L + R M + I P+E +S+LS CA +GAL G
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Query: 257 VWVHRYLNRARLPLSIR---------LSTSLLDMYAKCGNLDLAKRLFDSM--PDRDIVC 305
+H Y + P+ +R + L+DMYAKC +D A+ +FDS+ +RD+V
Sbjct: 385 KEIHCY--AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVT 442
Query: 306 WNAMISGLAMHGDGIGALKLFSEM--EKLGIKPDDITFIAVFTACSYSGMASEGLKLLDK 363
W MI G + HGD AL+L SEM E +P+ T AC AS + K
Sbjct: 443 WTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC-----ASLAALRIGK 497
Query: 364 MFSVYNMEPKSEHY-----GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLS 418
Y + + CL+D+ ++ G +A R+ N ++ + W + ++
Sbjct: 498 QIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA-----RLVFDNMMAKNEVTWTSLMT 552
Query: 419 ACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAAS 456
HG + A + + R+ L+ LYA S
Sbjct: 553 GYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS 590
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 170/359 (47%), Gaps = 37/359 (10%)
Query: 11 LLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTV 70
+ KCK + Q+K H ++ + G+ + + + S G L++A + +R
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYIS---VGCLSHAVSLLRRFPPSDA 90
Query: 71 CI--CNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
+ N++I+++ NG N+ L++F M +PDNYT P+ KAC + GE H
Sbjct: 91 GVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAH 150
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVD 188
S G + ++FVGN+L+AMY + ARKVFDE+ VS
Sbjct: 151 ALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVS--------------- 195
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLF-RLMQLTDIGPDESIFVSILSAC 247
W ++I Y + K L +F R+ PD V++L C
Sbjct: 196 ----------------WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWN 307
A +G G +H + + + ++ + L+DMYAKCG +D A +F +M +D+V WN
Sbjct: 240 ASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWN 299
Query: 308 AMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
AM++G + G A++LF +M++ IK D +T+ A + + G+ E L + +M S
Sbjct: 300 AMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 240/481 (49%), Gaps = 38/481 (7%)
Query: 11 LLEKCKNMKQLKQA---HAQVFTSGLDNNSFALSRVLAFCSHPHQ--GSLTYACKVFQRI 65
+L+ C ++ ++ H V +G + N + + +L H + G + Y +VF+ I
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLL----HMYMCCGEVNYGLRVFEDI 168
Query: 66 QHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGE 125
V ++I F+ N + + F M NG+ + + L AC +D G+
Sbjct: 169 PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGK 228
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
HG+ LG FD + F + + + +I YAK G
Sbjct: 229 WFHGFLQGLG--FDPY---------------------FQSKVGFNVILATSLIDMYAKCG 265
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILS 245
D+ AR FD PE+ W ++I+GY QN +E L +F M I PD+ F+S++
Sbjct: 266 DLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIR 325
Query: 246 ACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVC 305
A G G +H Y+++ + +L++MYAK G+ + AK+ F+ + +D +
Sbjct: 326 ASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIA 385
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKLG-IKPDDITFIAVFTACSYSGMASEGLKLLDKM 364
W +I GLA HG G AL +F M++ G PD IT++ V ACS+ G+ EG + +M
Sbjct: 386 WTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEM 445
Query: 365 FSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
++ +EP EHYGC+VD+LSR G FEEA +++ + N + W A L+ C H
Sbjct: 446 RDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVN----IWGALLNGCDIHE 501
Query: 425 QAQLATLAAESLVRLDN-PSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSV 483
+L + + SG+YVL+SN+YA +GR ADV+ +R+ MK+KRVDK G SSV
Sbjct: 502 NLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 561
Query: 484 E 484
E
Sbjct: 562 E 562
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 147/462 (31%), Positives = 234/462 (50%), Gaps = 49/462 (10%)
Query: 6 KRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSH-PHQGSLTYACKVFQR 64
K L+ LE C+++ +L Q H + S + N LSR++ FC+ P +L+YA VF+
Sbjct: 7 KPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFES 66
Query: 65 IQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLG 124
I P+V I N++I+ + + N ++ L + MLR G SPD +T PY LKAC+ LRD G
Sbjct: 67 IDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFG 126
Query: 125 EMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKV 184
+HG+ K G +++V L+ MY G++ +VF++IP + V+W
Sbjct: 127 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAW---------- 176
Query: 185 GDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSIL 244
G++ISG+V NN F + + FR MQ + +E+I V +L
Sbjct: 177 ---------------------GSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLL 215
Query: 245 SACAHMGALDTGVWVHRYLN--------RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFD 296
AC + TG W H +L ++++ ++ L+TSL+DMYAKCG+L A+ LFD
Sbjct: 216 VACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFD 275
Query: 297 SMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASE 356
MP+R +V WN++I+G + +GD AL +F +M LGI PD +TF++V A G +
Sbjct: 276 GMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQL 335
Query: 357 GLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAF 416
G + + S + LV++ ++TG E A + ++T+AW
Sbjct: 336 G-QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEK-----KDTIAWTVV 389
Query: 417 LSACCNHGQAQLATLAAESLVRLDN--PSGLYVLISNLYAAS 456
+ +HG A + + N P G+ L LYA S
Sbjct: 390 IIGLASHGHGNEALSIFQRMQEKGNATPDGITYL-GVLYACS 430
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 240/467 (51%), Gaps = 39/467 (8%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRT-LHVFTNMLRNGLSPDNYTIPYA 111
G L A KVF + + N +I A LI N L +F M G SPD YT+
Sbjct: 39 GDLVNARKVFDEMPDRKLTTWNAMI-AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSV 97
Query: 112 LKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSA 171
A LR S+G+ IHGY+ K GL D+ V +SL MY G + V +P +
Sbjct: 98 FSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNL 157
Query: 172 VSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
V+W+ +I G A QN C + LYL+++M+++
Sbjct: 158 VAWNTLIMGNA-------------------------------QNGCPETVLYLYKMMKIS 186
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
P++ FV++LS+C+ + G +H + + + +SL+ MY+KCG L A
Sbjct: 187 GCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDA 246
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEM-EKLGIKPDDITFIAVFTACSY 350
+ F D D V W++MIS HG G A++LF+ M E+ ++ +++ F+ + ACS+
Sbjct: 247 AKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSH 306
Query: 351 SGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEET 410
SG+ +GL+L D M Y +P +HY C+VDLL R G ++A IIR + +
Sbjct: 307 SGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT----DI 362
Query: 411 LAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVM 469
+ W+ LSAC H A++A + ++++D N S YVL++N++A++ R DV VR M
Sbjct: 363 VIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSM 422
Query: 470 KNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
++K V K G S E G V +F G+++ + EI+S L+++ L++
Sbjct: 423 RDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEM 469
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 152/307 (49%), Gaps = 11/307 (3%)
Query: 147 IAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWG 206
++MY GD +A V+ + + +S +++I+GY + GD+ AR FDE P++ W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 207 AMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRA 266
AMI+G +Q +EGL LFR M PDE S+ S A + ++ G +H Y +
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 267 RLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLF 326
L L + +++SL MY + G L + + SMP R++V WN +I G A +G L L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 327 SEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSR 386
M+ G +P+ ITF+ V ++CS + +G ++ + + L+ + S+
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKI-GASSVVAVVSSLISMYSK 239
Query: 387 TGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA-----TLAAESLVRLDN 441
G +A S E+ + W + +SA HGQ A T+A ++ + ++
Sbjct: 240 CGCLGDAAKAF-----SEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINE 294
Query: 442 PSGLYVL 448
+ L +L
Sbjct: 295 VAFLNLL 301
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/463 (31%), Positives = 231/463 (49%), Gaps = 39/463 (8%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + A ++F+ ++ +V +IK NG + F M GL D Y L
Sbjct: 219 GMIEDALQLFRGMEKDSVSWA-AMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
AC L + G+ IH + I+VG++LI MYC + A+ VFD + + V
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
S W AM+ GY Q +E + +F MQ +
Sbjct: 338 S-------------------------------WTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
I PD +SACA++ +L+ G H + L + +S SL+ +Y KCG++D +
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 293 RLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
RLF+ M RD V W AM+S A G + ++LF +M + G+KPD +T V +ACS +G
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 353 MASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLA 412
+ +G + M S Y + P HY C++DL SR+G EEAM R N + +
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAM----RFINGMPFPPDAIG 542
Query: 413 WRAFLSACCNHGQAQLATLAAESLVRLD--NPSGLYVLISNLYAASGRHADVRRVRDVMK 470
W LSAC N G ++ AAESL+ LD +P+G Y L+S++YA+ G+ V ++R M+
Sbjct: 543 WTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG-YTLLSSIYASKGKWDSVAQLRRGMR 601
Query: 471 NKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMH 513
K V K PG S ++ G + F A +++ P +D+I++ LE+++
Sbjct: 602 EKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELN 644
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 192/405 (47%), Gaps = 18/405 (4%)
Query: 27 QVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNL 86
+VF N F+ + +L ++ G ++ F+++ N +I+ + ++G +
Sbjct: 62 RVFDRIPQPNLFSWNNLL--LAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLV 119
Query: 87 NRTLHVFTNMLRN-GLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNS 145
+ + M+R+ + T+ LK ++ SLG+ IHG KLG + VG+
Sbjct: 120 GAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 179
Query: 146 LIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIW 205
L+ MY G + A+KVF + + V ++ ++ G G ++ A F EKD W
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSW 238
Query: 206 GAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNR 265
AMI G QN KE + FR M++ + D+ F S+L AC +GA++ G +H + R
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR 298
Query: 266 ARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKL 325
I + ++L+DMY KC L AK +FD M +++V W AM+ G G A+K+
Sbjct: 299 TNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKI 358
Query: 326 FSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHY----GCLV 381
F +M++ GI PD T +AC+ EG + K + + HY LV
Sbjct: 359 FLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLI-----HYVTVSNSLV 413
Query: 382 DLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
L + G +++ R+ N N + ++W A +SA G+A
Sbjct: 414 TLYGKCGDIDDST----RLFNEMN-VRDAVSWTAMVSAYAQFGRA 453
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 133/303 (43%), Gaps = 43/303 (14%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVL-AFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAF 80
KQ HA + + ++ + S ++ +C L YA VF R++ V ++ +
Sbjct: 290 KQIHACIIRTNFQDHIYVGSALIDMYCKCK---CLHYAKTVFDRMKQKNVVSWTAMVVGY 346
Query: 81 LINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDI 140
G + +F +M R+G+ PD+YT+ A+ ACA + G HG + GL+ +
Sbjct: 347 GQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYV 406
Query: 141 FVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEK 200
V NSL+ +Y GD+ + ++F+E+ AVSW+ M+S YA+ G
Sbjct: 407 TVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRA------------- 453
Query: 201 DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVH 260
E + LF M + PD ++SAC+ G ++ G
Sbjct: 454 ------------------VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG---Q 492
Query: 261 RYL----NRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP-DRDIVCWNAMISGLAM 315
RY + + SI + ++D++++ G L+ A R + MP D + W ++S
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 316 HGD 318
G+
Sbjct: 553 KGN 555
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 145/354 (40%), Gaps = 42/354 (11%)
Query: 112 LKACAAL--RDHS-LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPS 168
+K C L R+ S +MIHG + + F+ N+++ Y + AR+VFD IP
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 169 LSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLM 228
+ SW+ ++ Y+K G + F++ P++D W +I GY + + + M
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 229 QLTDIGPD--ESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCG 286
+ D + +++L + G + G +H + + + + + LL MYA G
Sbjct: 130 -MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 287 NLDLAKRLFDSMPDR------------------------------DIVCWNAMISGLAMH 316
+ AK++F + DR D V W AMI GLA +
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQN 248
Query: 317 GDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEH 376
G A++ F EM+ G+K D F +V AC G +EG K + N +
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG-KQIHACIIRTNFQDHIYV 307
Query: 377 YGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLAT 430
L+D+ + A + R+ N ++W A + G+A+ A
Sbjct: 308 GSALIDMYCKCKCLHYAKTVFDRMKQKN-----VVSWTAMVVGYGQTGRAEEAV 356
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 149/469 (31%), Positives = 252/469 (53%), Gaps = 10/469 (2%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + A F + + N I+ AF + + L++ ++L ++ D+ TI L
Sbjct: 380 GDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLL 439
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFD---IFVGNSLIAMYCVFGDMVAARKVFDEIPSL 169
K C ++ + +HGYS K GLL D +GN+L+ Y G++ A K+F +
Sbjct: 440 KFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSER 499
Query: 170 -SAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLM 228
+ VS++ ++SGY G D A++ F E D W M+ Y ++ C E + +FR +
Sbjct: 500 RTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREI 559
Query: 229 QLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNL 288
Q + P+ +++L CA + +L H Y+ R L IRL +LLD+YAKCG+L
Sbjct: 560 QARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSL 618
Query: 289 DLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTAC 348
A +F S RD+V + AM++G A+HG G AL ++S M + IKPD + + TAC
Sbjct: 619 KHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTAC 678
Query: 349 SYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSE 408
++G+ +GL++ D + +V+ M+P E Y C VDL++R G ++A + ++ N +
Sbjct: 679 CHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNAN- 737
Query: 409 ETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRD 467
W L AC + + L A L++ + + +G +VLISN+YAA + V +R+
Sbjct: 738 ---IWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRN 794
Query: 468 VMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
+MK K + K GCS +E+DG F++G+ +HP+ D I ++ ++LQ+
Sbjct: 795 LMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQM 843
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 129/296 (43%), Gaps = 37/296 (12%)
Query: 60 KVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNM-LRNGLSPDNYTIPYALKACAAL 118
K+F+++ + N ++ ++ T+ F M + P + T L C L
Sbjct: 77 KMFRQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRL 135
Query: 119 RDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMI 178
D G+ +H Y K GL D VGN+L++MY FG +F +
Sbjct: 136 GDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFG------FIFPD------------- 176
Query: 179 SGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDES 238
A FD +KD W A+I+G+ +NN + F LM P+ +
Sbjct: 177 -----------AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYA 225
Query: 239 IFVSILSACAHMG---ALDTGVWVHRYL-NRARLPLSIRLSTSLLDMYAKCGNLDLAKRL 294
++L CA M A +G +H Y+ R+ L + + SL+ Y + G ++ A L
Sbjct: 226 TIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASL 285
Query: 295 FDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLG-IKPDDITFIAVFTACS 349
F M +D+V WN +I+G A + + A +LF + G + PD +T I++ C+
Sbjct: 286 FTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCA 341
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 144/315 (45%), Gaps = 40/315 (12%)
Query: 22 KQAHAQVFT-SGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAF 80
+Q H+ V S L + F + +++F + G + A +F R+ + N +I +
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSF--YLRVGRIEEAASLFTRMGSKDLVSWNVVIAGY 304
Query: 81 LINGNLNRTLHVFTNMLRNG-LSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLG-LLF 138
N + +F N++ G +SPD+ TI L CA L D + G+ IH Y + LL
Sbjct: 305 ASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLE 364
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
D VGN+LI+ Y FGD AA F + + +SW+ ++ +A ++P
Sbjct: 365 DTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA-------------DSP 411
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVW 258
++ + F L+ +T D +S+L C ++ +
Sbjct: 412 KQFQ---------------FLNLLHHLLNEAIT---LDSVTILSLLKFCINVQGIGKVKE 453
Query: 259 VHRYLNRARL---PLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD-RDIVCWNAMISGLA 314
VH Y +A L +L +LLD YAKCGN++ A ++F + + R +V +N+++SG
Sbjct: 454 VHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYV 513
Query: 315 MHGDGIGALKLFSEM 329
G A LF+EM
Sbjct: 514 NSGSHDDAQMLFTEM 528
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 117/298 (39%), Gaps = 39/298 (13%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
A F I V N II F N + F ML+ P+ TI L CA+
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS 236
Query: 118 LRDH---SLGEMIHGYSSKLGLL-FDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVS 173
+ + G IH Y + L +FV NSL++ Y G + A +F + S VS
Sbjct: 237 MDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVS 296
Query: 174 WSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNC--FKEGLYLFRLMQLT 231
W+++I+GYA +NC FK L+
Sbjct: 297 WNVVIAGYA--------------------------------SNCEWFKAFQLFHNLVHKG 324
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLS-IRLSTSLLDMYAKCGNLDL 290
D+ PD +SIL CA + L +G +H Y+ R L + +L+ YA+ G+
Sbjct: 325 DVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSA 384
Query: 291 AKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTAC 348
A F M +DI+ WNA++ A L L + I D +T +++ C
Sbjct: 385 AYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFC 442
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 138/329 (41%), Gaps = 44/329 (13%)
Query: 97 LRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDM 156
L +G D+ +KACA++ D + G +HG KLG + V S++ MY M
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM 72
Query: 157 VAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNN 216
+K+F ++ SL V +W +++G + +
Sbjct: 73 DDCQKMFRQMDSLDPV-------------------------------VWNIVLTG-LSVS 100
Query: 217 CFKEGLYLFRLMQLTD-IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLS 275
C +E + F+ M D P F +L C +G G +H Y+ +A L +
Sbjct: 101 CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVG 160
Query: 276 TSLLDMYAKCGNL-DLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGI 334
+L+ MYAK G + A FD + D+D+V WNA+I+G + + A + F M K
Sbjct: 161 NALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPT 220
Query: 335 KPDDITFIAVFTACSY--SGMASEGLKLLDKMFSVYNMEPKSEHYGC--LVDLLSRTGFF 390
+P+ T V C+ +A + + + V ++ + C LV R G
Sbjct: 221 EPNYATIANVLPVCASMDKNIACRSGRQIHS-YVVQRSWLQTHVFVCNSLVSFYLRVGRI 279
Query: 391 EEAMVIIRRITNSNNGSEETLAWRAFLSA 419
EEA + R+ GS++ ++W ++
Sbjct: 280 EEAASLFTRM-----GSKDLVSWNVVIAG 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 225 FRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAK 284
FRL L+ G D +F+ ++ ACA + L +G +H + + +S S+L+MYAK
Sbjct: 11 FRL--LSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAK 68
Query: 285 CGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLG-IKPDDITFIA 343
C +D +++F M D V WN +++GL++ G ++ F M KP +TF
Sbjct: 69 CRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSVTFAI 127
Query: 344 VFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGF-FEEAMVIIRRITN 402
V C G + G + + +E + LV + ++ GF F +A I +
Sbjct: 128 VLPLCVRLGDSYNGKSMHSYIIKA-GLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIAD 186
Query: 403 SNNGSEETLAWRAFLSA 419
++ ++W A ++
Sbjct: 187 -----KDVVSWNAIIAG 198
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 222/413 (53%), Gaps = 16/413 (3%)
Query: 77 IKAFLINGNLNRTLHVFTNMLRNGLSP-DNYTIPYALKACAALRDHSLGEMIHGYSSKLG 135
+ ++ GN + L++F M + P D + ALK+CAA LG +H +S K
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 136 LLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFF- 194
L + FVG +L+ MY + ARK+FDEIP +AV W+ MIS Y G V A +
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 195 --DETPEKDKGIWGAMISGYV--QNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHM 250
D P ++ + A+I G V ++ ++ + +R M P+ ++++SAC+ +
Sbjct: 139 AMDVMP--NESSFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLITLLALVSACSAI 195
Query: 251 GALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMI 310
GA +H Y R + +L + L++ Y +CG++ + +FDSM DRD+V W+++I
Sbjct: 196 GAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLI 255
Query: 311 SGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNM 370
S A+HGD ALK F EME + PDDI F+ V ACS++G+A E L +M Y +
Sbjct: 256 SAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGL 315
Query: 371 EPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLAT 430
+HY CLVD+LSR G FEEA +I+ + W A L AC N+G+ +LA
Sbjct: 316 RASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAK----TWGALLGACRNYGEIELAE 371
Query: 431 LAAESL--VRLDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCS 481
+AA L V +NP+ YVL+ +Y + GR + R+R MK V +PG S
Sbjct: 372 IAARELLMVEPENPAN-YVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 155/514 (30%), Positives = 252/514 (49%), Gaps = 40/514 (7%)
Query: 3 SCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVF 62
+C L + Q KQ H GLD + S ++ S G + A KVF
Sbjct: 530 ACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC--GIIKDARKVF 587
Query: 63 QRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHS 122
+ +V N +I + N NL + +F ML G++P T ++AC +
Sbjct: 588 SSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLT 646
Query: 123 LGEMIHGYSSKLGLLFD-IFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGY 181
LG HG +K G + ++G SL+ MY M A +F E+ S ++
Sbjct: 647 LGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIV-------- 698
Query: 182 AKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFV 241
+W M+SG+ QN ++E L ++ M+ + PD++ FV
Sbjct: 699 ----------------------LWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFV 736
Query: 242 SILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR 301
++L C+ + +L G +H + L S +L+DMYAKCG++ + ++FD M R
Sbjct: 737 TVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR 796
Query: 302 -DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL 360
++V WN++I+G A +G ALK+F M + I PD+ITF+ V TACS++G S+G K+
Sbjct: 797 SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Query: 361 LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSAC 420
+ M Y +E + +H C+VDLL R G+ +EA I + N + W + L AC
Sbjct: 857 FEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFI----EAQNLKPDARLWSSLLGAC 912
Query: 421 CNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPG 479
HG ++AE L+ L+ S YVL+SN+YA+ G +R VM+++ V K PG
Sbjct: 913 RIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPG 972
Query: 480 CSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMH 513
S ++++ F AG+K+H ++ +I LE ++
Sbjct: 973 YSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLY 1006
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 197/431 (45%), Gaps = 51/431 (11%)
Query: 22 KQAHAQVFTSGLDNNSF---ALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIK 78
K H++ G+D+ A+ + A C+ ++YA K F ++ V N+++
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQ-----VSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 79 AFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLF 138
+ G + L F ++ N + P+ +T L CA + G IH K+GL
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK--------------- 183
+ + G +L+ MY + AR+VF+ I + V W+ + SGY K
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 184 --------------------VGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLY 223
+G + ARL F E D W MISG+ + C +
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIE 313
Query: 224 LFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYA 283
F M+ + + S S+LSA + LD G+ VH + L +I + +SL+ MY+
Sbjct: 314 YFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYS 373
Query: 284 KCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIA 343
KC ++ A ++F+++ +++ V WNAMI G A +G+ ++LF +M+ G DD TF +
Sbjct: 374 KCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTS 433
Query: 344 VFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHY---GCLVDLLSRTGFFEEAMVIIRRI 400
+ + C+ AS L++ + S+ + +++ LVD+ ++ G E+A I R+
Sbjct: 434 LLSTCA----ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 401 TNSNNGSEETL 411
+ +N + T+
Sbjct: 490 CDRDNVTWNTI 500
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 153/324 (47%), Gaps = 34/324 (10%)
Query: 25 HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLING 84
HA+ GL +N + S +++ S + + A KVF+ ++ N +I+ + NG
Sbjct: 350 HAEAIKLGLASNIYVGSSLVSMYSKCEK--MEAAAKVFEALEEKNDVFWNAMIRGYAHNG 407
Query: 85 NLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGN 144
++ + +F +M +G + D++T L CAA D +G H K L ++FVGN
Sbjct: 408 ESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGN 467
Query: 145 SLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGI 204
+L+ MY AK G ++ AR F+ ++D
Sbjct: 468 ALVDMY-------------------------------AKCGALEDARQIFERMCDRDNVT 496
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLN 264
W +I YVQ+ E LF+ M L I D + S L AC H+ L G VH
Sbjct: 497 WNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSV 556
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALK 324
+ L + +SL+DMY+KCG + A+++F S+P+ +V NA+I+G + + + A+
Sbjct: 557 KCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVV 615
Query: 325 LFSEMEKLGIKPDDITFIAVFTAC 348
LF EM G+ P +ITF + AC
Sbjct: 616 LFQEMLTRGVNPSEITFATIVEAC 639
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 173/405 (42%), Gaps = 39/405 (9%)
Query: 40 LSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRN 99
L+ V ++ G L A +F + P V N +I G + F NM ++
Sbjct: 262 LAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKS 321
Query: 100 GLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAA 159
+ T+ L A + + LG ++H + KLGL +I+VG+SL++MY M AA
Sbjct: 322 SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAA 381
Query: 160 RKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFK 219
KVF+ + EK+ W AMI GY N
Sbjct: 382 AKVFEALE-------------------------------EKNDVFWNAMIRGYAHNGESH 410
Query: 220 EGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLL 279
+ + LF M+ + D+ F S+LS CA L+ G H + + +L ++ + +L+
Sbjct: 411 KVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALV 470
Query: 280 DMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDI 339
DMYAKCG L+ A+++F+ M DRD V WN +I + A LF M GI D
Sbjct: 471 DMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA 530
Query: 340 TFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYG-CLVDLLSRTGFFEEAMVIIR 398
+ AC++ +G ++ SV + H G L+D+ S+ G ++A +
Sbjct: 531 CLASTLKACTHVHGLYQGKQV--HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 399 RITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPS 443
+ + ++ A ++ + + L E L R NPS
Sbjct: 589 SLPEWS-----VVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPS 628
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 207/473 (43%), Gaps = 58/473 (12%)
Query: 10 TLLEKCKNMKQLK---QAHAQVFTSGLDNNSF---ALSRVLAFCSHPHQGSLTYACKVFQ 63
+LL C L+ Q H+ + L N F AL + A C G+L A ++F+
Sbjct: 433 SLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKC-----GALEDARQIFE 487
Query: 64 RIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSL 123
R+ NTII +++ + N + +F M G+ D + LKAC +
Sbjct: 488 RMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQ 547
Query: 124 GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK 183
G+ +H S K GL D+ G+SLI MY G + ARKVF +P S VS + +I+GY+
Sbjct: 548 GKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS- 606
Query: 184 VGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
QNN +E + LF+ M + P E F +I
Sbjct: 607 ------------------------------QNN-LEEAVVLFQEMLTRGVNPSEITFATI 635
Query: 244 LSACAHMGALDTGVWVH-RYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD-R 301
+ AC +L G H + R L SLL MY + A LF + +
Sbjct: 636 VEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPK 695
Query: 302 DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLL 361
IV W M+SG + +G ALK + EM G+ PD TF+ V CS EG +
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIH 755
Query: 362 DKMFSV-YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSAC 420
+F + ++++ + + L+D+ ++ G + + + + +N ++W + ++
Sbjct: 756 SLIFHLAHDLDELTSN--TLIDMYAKCGDMKGSSQVFDEMRRRSN----VVSWNSLINGY 809
Query: 421 CNHGQAQLATLAAESL----VRLDNPSGLYVLISNLYAASGRHADVRRVRDVM 469
+G A+ A +S+ + D + L VL + +A G+ +D R++ ++M
Sbjct: 810 AKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHA--GKVSDGRKIFEMM 860
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 27/235 (11%)
Query: 156 MVAARKVFDEIPSLSAVSWSL----------------------MISGYAKVGDVDLARLF 193
+ +RKVFDE+P A++ + ++ YAK V A
Sbjct: 58 LFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQ 117
Query: 194 FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQL--TDIGPDESIFVSILSACAHMG 251
FD EKD W +M+S Y ++ K G L + L I P++ F +LS CA
Sbjct: 118 FD-FLEKDVTAWNSMLSMY--SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARET 174
Query: 252 ALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMIS 311
++ G +H + + L + +L+DMYAKC + A+R+F+ + D + VCW + S
Sbjct: 175 NVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFS 234
Query: 312 GLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
G G A+ +F M G +PD + F+ V G + L +M S
Sbjct: 235 GYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS 289
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/459 (30%), Positives = 236/459 (51%), Gaps = 41/459 (8%)
Query: 55 LTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKA 114
L A ++F ++ V T+I A+ + L + MLR+ + P+ YT L++
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 115 CAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSW 174
C + D M+H K GL D+FV ++LI ++
Sbjct: 172 CNGMSD---VRMLHCGIIKEGLESDVFVRSALIDVF------------------------ 204
Query: 175 SLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG 234
AK+G+ + A FDE D +W ++I G+ QN+ L LF+ M+
Sbjct: 205 -------AKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 257
Query: 235 PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRL 294
+++ S+L AC + L+ G+ H ++ + + L+ +L+DMY KCG+L+ A R+
Sbjct: 258 AEQATLTSVLRACTGLALLELGMQAHVHI--VKYDQDLILNNALVDMYCKCGSLEDALRV 315
Query: 295 FDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMA 354
F+ M +RD++ W+ MISGLA +G ALKLF M+ G KP+ IT + V ACS++G+
Sbjct: 316 FNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLL 375
Query: 355 SEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWR 414
+G M +Y ++P EHYGC++DLL + G ++A+ ++ N + + WR
Sbjct: 376 EDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV----KLLNEMECEPDAVTWR 431
Query: 415 AFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKR 473
L AC LA AA+ ++ LD +G Y L+SN+YA S + V +R M+++
Sbjct: 432 TLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRG 491
Query: 474 VDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
+ K PGCS +E++ + FI G+ +HPQ+ E+ L ++
Sbjct: 492 IKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQL 530
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 141/334 (42%), Gaps = 45/334 (13%)
Query: 10 TLLEKCKNMKQLKQAHAQVFTSGLDNNSF---ALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
++L C M ++ H + GL+++ F AL V A P A VF +
Sbjct: 167 SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED-----ALSVFDEMV 221
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
+ N+II F N + L +F M R G + T+ L+AC L LG
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ 281
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
H + K D+ + N+L+ MYC G + A +VF+++ ++WS MISG A+
Sbjct: 282 AHVHIVKYDQ--DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ--- 336
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
+GY Q E L LF M+ + P+ V +L A
Sbjct: 337 -----------------------NGYSQ-----EALKLFERMKSSGTKPNYITIVGVLFA 368
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTS-LLDMYAKCGNLDLAKRLFDSMP-DRDIV 304
C+H G L+ G + R + + +R ++D+ K G LD A +L + M + D V
Sbjct: 369 CSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAV 428
Query: 305 CWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDD 338
W ++ + + + L ++ + + + P+D
Sbjct: 429 TWRTLLGACRVQRNMV--LAEYAAKKVIALDPED 460
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 157/376 (41%), Gaps = 50/376 (13%)
Query: 85 NLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGN 144
+L R + ++ +GL D+ T +K C + R G +I + G +F+ N
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 145 SLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGI 204
LI MY F + A ++FD++P + +SW+ MIS Y+K
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKC-------------------- 140
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLN 264
++ L L LM ++ P+ + S+L +C M + +H +
Sbjct: 141 -----------KIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGII 186
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALK 324
+ L + + ++L+D++AK G + A +FD M D + WN++I G A + AL+
Sbjct: 187 KEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALE 246
Query: 325 LFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEH----YGCL 380
LF M++ G + T +V AC+ GL LL+ + K + L
Sbjct: 247 LFKRMKRAGFIAEQATLTSVLRACT-------GLALLELGMQAHVHIVKYDQDLILNNAL 299
Query: 381 VDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD 440
VD+ + G E+A+ + ++ + + W +S +G +Q A E +
Sbjct: 300 VDMYCKCGSLEDALRVFNQMK-----ERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 441 NPSGLYVLISNLYAAS 456
++ L+A S
Sbjct: 355 TKPNYITIVGVLFACS 370
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 202/370 (54%), Gaps = 6/370 (1%)
Query: 144 NSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKG 203
S++ Y + G + A + F+ +P ++ + MI G+ +VG++ AR FD ++D
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 204 IWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYL 263
W MI Y + E L LF MQ + P +SILS CA + +L G VH +L
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHL 357
Query: 264 NRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGAL 323
R + + +++ L+ MY KCG L AK +FD +DI+ WN++ISG A HG G AL
Sbjct: 358 VRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEAL 417
Query: 324 KLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDL 383
K+F EM G P+ +T IA+ TACSY+G EGL++ + M S + + P EHY C VD+
Sbjct: 418 KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 384 LSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NP 442
L R G ++AM +I +T + + W A L AC H + LA +AA+ L + +
Sbjct: 478 LGRAGQVDKAMELIESMTIKPDAT----VWGALLGACKTHSRLDLAEVAAKKLFENEPDN 533
Query: 443 SGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFI-AGEKTHPQ 501
+G YVL+S++ A+ + DV VR M+ V K PGCS +E+ V F G K HP+
Sbjct: 534 AGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPE 593
Query: 502 MDEIHSILEK 511
I +LEK
Sbjct: 594 QAMILMMLEK 603
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 153/375 (40%), Gaps = 53/375 (14%)
Query: 55 LTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKA 114
+ A VF+ + V ++K ++ G + +F M P+ + + +
Sbjct: 95 IVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM------PERNEVSWTVMF 148
Query: 115 CAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSW 174
+ D + + Y + + D+ ++I C G + AR +FDE+ + V+W
Sbjct: 149 GGLIDDGRIDKARKLYD--MMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTW 206
Query: 175 SLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG 234
+ MI+GY + VD+AR F+ PEK + W +M+ GY + ++ F +M + +
Sbjct: 207 TTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPV- 265
Query: 235 PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRL 294
AC +++ + + G + A+R+
Sbjct: 266 ----------IAC----------------------------NAMIVGFGEVGEISKARRV 287
Query: 295 FDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMA 354
FD M DRD W MI G + AL LF++M+K G++P + I++ + C+
Sbjct: 288 FDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL 347
Query: 355 SEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWR 414
G ++ + + L+ + + G +A ++ R + S++ + W
Sbjct: 348 QYGRQVHAHLVRC-QFDDDVYVASVLMTMYVKCGELVKAKLVFDRFS-----SKDIIMWN 401
Query: 415 AFLSACCNHGQAQLA 429
+ +S +HG + A
Sbjct: 402 SIISGYASHGLGEEA 416
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 119/281 (42%), Gaps = 37/281 (13%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G ++ A +VF ++ +IKA+ G L +F M + G+ P ++ L
Sbjct: 279 GEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISIL 338
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
CA L G +H + + D++V + L+ MY G++V A+ VFD S +
Sbjct: 339 SVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDII 398
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
W+ +ISGYA G + A F E P G M
Sbjct: 399 MWNSIISGYASHGLGEEALKIFHEMPSS-----GTM------------------------ 429
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYL-NRARLPLSIRLSTSLLDMYAKCGNLDLA 291
P++ ++IL+AC++ G L+ G+ + + ++ + ++ + +DM + G +D A
Sbjct: 430 --PNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKA 487
Query: 292 KRLFDSMPDR-DIVCWNAMISGLAMHGD----GIGALKLFS 327
L +SM + D W A++ H + A KLF
Sbjct: 488 MELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFE 528
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 28/235 (11%)
Query: 144 NSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKG 203
NS+++ Y G AR++FDE+ + VSW+ ++SGY K + AR F+ PE++
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 204 IWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYL 263
W AM+ GY+Q E LF M P+ + + G +D G +
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRM------PERN---EVSWTVMFGGLIDDG-----RI 157
Query: 264 NRAR-----LPLS-IRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHG 317
++AR +P+ + ST+++ + G +D A+ +FD M +R++V W MI+G +
Sbjct: 158 DKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNN 217
Query: 318 DGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEP 372
A KLF M + ++++ ++ + SG + ++ F V M+P
Sbjct: 218 RVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIEDA----EEFFEVMPMKP 264
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 120/307 (39%), Gaps = 59/307 (19%)
Query: 170 SAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQ 229
+ V+ S IS +++G ++ AR FFD K G W +++SGY N KE LF
Sbjct: 16 TGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLF---- 71
Query: 230 LTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLD 289
DE M + W L+ Y K +
Sbjct: 72 ------DE------------MSERNVVSW-----------------NGLVSGYIKNRMIV 96
Query: 290 LAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
A+ +F+ MP+R++V W AM+ G G A LF M + +++++ +F
Sbjct: 97 EARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMF---- 148
Query: 350 YSGMASEGLKLLDKMFSVYNMEPKSEHYGC--LVDLLSRTGFFEEAMVIIRRITNSNNGS 407
G+ +G +DK +Y+M P + ++ L R G +EA +I + N
Sbjct: 149 -GGLIDDG--RIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN--- 202
Query: 408 EETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAASGRHADVRRVRD 467
+ W ++ + + +A E + S +L+ Y SGR D +
Sbjct: 203 --VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLG--YTLSGRIEDAEEFFE 258
Query: 468 VMKNKRV 474
VM K V
Sbjct: 259 VMPMKPV 265
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 226/465 (48%), Gaps = 38/465 (8%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G ++ A KVF + V + +I F NG N + +F M + P+ +T+ L
Sbjct: 296 GDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSIL 355
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
CA + LGE +HG K+G DI+V N+LI +Y
Sbjct: 356 NGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVY---------------------- 393
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
AK +D A F E K++ W +I GY + +FR
Sbjct: 394 ---------AKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQ 444
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
+ E F S L ACA + ++D GV VH + + +S SL+DMYAKCG++ A+
Sbjct: 445 VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQ 504
Query: 293 RLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
+F+ M D+ WNA+ISG + HG G AL++ M+ KP+ +TF+ V + CS +G
Sbjct: 505 SVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAG 564
Query: 353 MASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLA 412
+ +G + + M + +EP EHY C+V LL R+G ++AM +I I +
Sbjct: 565 LIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPY----EPSVMI 620
Query: 413 WRAFLSACCNHGQAQLATLAAESLVRLDNP--SGLYVLISNLYAASGRHADVRRVRDVMK 470
WRA LSA N + A +AE ++++ NP YVL+SN+YA + + A+V +R MK
Sbjct: 621 WRAMLSASMNQNNEEFARRSAEEILKI-NPKDEATYVLVSNMYAGAKQWANVASIRKSMK 679
Query: 471 NKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQ 515
V K PG S +E G V F G HP M I+ +LE ++++
Sbjct: 680 EMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMK 724
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 179/428 (41%), Gaps = 46/428 (10%)
Query: 25 HAQVFTSGLDNNSF---ALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
H+ + G D+N+F AL + C GS+ A VF+ I + + I+ ++
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVC-----GSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 82 INGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIF 141
NG +L + + M G P+NYT ALKA L + +HG K + D
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
VG L+ +Y GDM A KVF +E P+ D
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVF-------------------------------NEMPKND 312
Query: 202 KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHR 261
W MI+ + QN E + LF M+ + P+E SIL+ CA G +H
Sbjct: 313 VVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHG 372
Query: 262 YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG 321
+ + L I +S +L+D+YAKC +D A +LF + ++ V WN +I G G+G
Sbjct: 373 LVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGK 432
Query: 322 ALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLV 381
A +F E + + ++TF + AC+ G+++ N + K L+
Sbjct: 433 AFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK-KVAVSNSLI 491
Query: 382 DLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD- 440
D+ ++ G + A + + + S W A +S HG + A + + D
Sbjct: 492 DMYAKCGDIKFAQSVFNEMETIDVAS-----WNALISGYSTHGLGRQALRILDIMKDRDC 546
Query: 441 NPSGLYVL 448
P+GL L
Sbjct: 547 KPNGLTFL 554
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 175 SLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG 234
+++++ Y K G A FDE PE++ + + GY + GLY + ++
Sbjct: 88 NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPI--GLYSRLHREGHELN 145
Query: 235 PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRL 294
P +F S L + + W+H + + + + +L++ Y+ CG++D A+ +
Sbjct: 146 P--HVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTV 203
Query: 295 FDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTA 347
F+ + +DIV W ++S +G +LKL S M G P++ TF A
Sbjct: 204 FEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 254/522 (48%), Gaps = 54/522 (10%)
Query: 5 SKRCLTLLEKC---KNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKV 61
S +TL++ K++K L+ HA G+D + ++ ++ G L A V
Sbjct: 153 SVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIS--TYGKCGDLDSAKLV 210
Query: 62 FQRIQH--PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALR 119
F+ I TV N++ KA+ + G ++ MLR PD T +C
Sbjct: 211 FEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPE 270
Query: 120 DHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMIS 179
+ G +IH ++ LG DI N+ I+MY
Sbjct: 271 TLTQGRLIHSHAIHLGTDQDIEAINTFISMY----------------------------- 301
Query: 180 GYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
+K D ARL FD + W MISGY + E L LF M + PD
Sbjct: 302 --SKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVT 359
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPL------SIRLSTSLLDMYAKCGNLDLAKR 293
+S++S C G+L+TG W+ AR + ++ + +L+DMY+KCG++ A+
Sbjct: 360 LLSLISGCGKFGSLETGKWID-----ARADIYGCKRDNVMICNALIDMYSKCGSIHEARD 414
Query: 294 LFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGM 353
+FD+ P++ +V W MI+G A++G + ALKLFS+M L KP+ ITF+AV AC++SG
Sbjct: 415 IFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGS 474
Query: 354 ASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAW 413
+G + M VYN+ P +HY C+VDLL R G EEA+ +IR ++ + W
Sbjct: 475 LEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAG----IW 530
Query: 414 RAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNK 472
A L+AC H ++A AAESL L+ + YV ++N+YAA+G R+R +MK +
Sbjct: 531 GALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQR 590
Query: 473 RVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHL 514
+ K PG S ++++G F GE H + + I+ L + L
Sbjct: 591 NIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSL 632
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 33/272 (12%)
Query: 88 RTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLI 147
+L +F M R G P+N+T P+ KACA L D EM+H + K D+FVG + +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 148 AMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGA 207
M+ K VD A F+ PE+D W A
Sbjct: 95 DMF-------------------------------VKCNSVDYAAKVFERMPERDATTWNA 123
Query: 208 MISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRAR 267
M+SG+ Q+ + LFR M+L +I PD ++++ + + +L +H R
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 268 LPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP--DRDIVCWNAMISGLAMHGDGIGALKL 325
+ + + ++ + + Y KCG+LD AK +F+++ DR +V WN+M ++ G+ A L
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243
Query: 326 FSEMEKLGIKPDDITFIAVFTACSYSGMASEG 357
+ M + KPD TFI + +C ++G
Sbjct: 244 YCLMLREEFKPDLSTFINLAASCQNPETLTQG 275
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 162/374 (43%), Gaps = 40/374 (10%)
Query: 54 SLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALK 113
S+ YA KVF+R+ N ++ F +G+ ++ +F M N ++PD+ T+ ++
Sbjct: 102 SVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQ 161
Query: 114 ACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP--SLSA 171
+ + + L E +H +LG+ + V N+ I+ Y GD+ +A+ VF+ I +
Sbjct: 162 SASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTV 221
Query: 172 VSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
VSW+ M Y+ G+ FD GLY LM
Sbjct: 222 VSWNSMFKAYSVFGEA------FDAF-----------------------GLYC--LMLRE 250
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
+ PD S F+++ ++C + L G +H + I + + MY+K + A
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA 310
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYS 351
+ LFD M R V W MISG A GD AL LF M K G KPD +T +++ + C
Sbjct: 311 RLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKF 370
Query: 352 GMASEGLKLLDKMFSVYNMEPKSEHY-GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEET 410
G G K +D +Y + + L+D+ S+ G EA I N +
Sbjct: 371 GSLETG-KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIF-----DNTPEKTV 424
Query: 411 LAWRAFLSACCNHG 424
+ W ++ +G
Sbjct: 425 VTWTTMIAGYALNG 438
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 10/225 (4%)
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLN 264
W I V N E L LFR M+ P+ F + ACA + + VH +L
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALK 324
++ + + T+ +DM+ KC ++D A ++F+ MP+RD WNAM+SG G A
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 325 LFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSV---YNMEPKSEHYGCLV 381
LF EM I PD +T + + + S+ + LKLL+ M +V ++ + +
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASF----EKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 382 DLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
+ G + A ++ I + G ++W + A G+A
Sbjct: 196 STYGKCGDLDSAKLVFEAI---DRGDRTVVSWNSMFKAYSVFGEA 237
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/491 (30%), Positives = 243/491 (49%), Gaps = 55/491 (11%)
Query: 15 CKNMKQL---KQAHAQVFTSGLDNN---SFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
C ++++ + H+ +F GL+ + + +L + A C G + YA K+F I
Sbjct: 142 CAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKC-----GQVGYARKLFDEITER 196
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
N++I + G + +F M G PD T+ L AC+ L D G ++
Sbjct: 197 DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLE 256
Query: 129 --GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
+ K+GL F+G+ LI+MY K GD
Sbjct: 257 EMAITKKIGL--STFLGSKLISMY-------------------------------GKCGD 283
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
+D AR F++ +KD+ W AMI+ Y QN E LF M+ T + PD ++LSA
Sbjct: 284 LDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSA 343
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
C +GAL+ G + + + L +I ++T L+DMY KCG ++ A R+F++MP ++ W
Sbjct: 344 CGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATW 403
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
NAMI+ A G AL LF +++ + P DITFI V +AC ++G+ +G + +M S
Sbjct: 404 NAMITAYAHQGHAKEALLLF---DRMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSS 460
Query: 367 VYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
++ + PK EHY ++DLLSR G +EA + R G + + A L AC
Sbjct: 461 MFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFP----GKPDEIMLAAILGACHKRKDV 516
Query: 427 QLATLAAESLVRLDNP--SGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVE 484
+ A L+ + +G YV+ SN+ A + ++R +M+++ V K PGCS +E
Sbjct: 517 AIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIE 576
Query: 485 IDGVVMEFIAG 495
I+G +MEF+AG
Sbjct: 577 IEGELMEFLAG 587
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 203/424 (47%), Gaps = 44/424 (10%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
L LL+KC ++ QL+Q AQ+ ++ +F + + + G Y+ +F + P
Sbjct: 41 LFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVEL------GDFNYSSFLFSVTEEP 94
Query: 69 TVCICNTIIKAFLINGNLNRT-LHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
N +I+ N + L ++ M +GL PD +T + ACA L + +G +
Sbjct: 95 NHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSV 154
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
H K+GL D+ + +SLI MY G + ARK+FDEI VSW+ MISGY++
Sbjct: 155 HSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSE---- 210
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
+GY K+ + LFR M+ PDE VS+L AC
Sbjct: 211 ----------------------AGYA-----KDAMDLFRKMEEEGFEPDERTLVSMLGAC 243
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWN 307
+H+G L TG + ++ LS L + L+ MY KCG+LD A+R+F+ M +D V W
Sbjct: 244 SHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWT 303
Query: 308 AMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSV 367
AMI+ + +G A KLF EMEK G+ PD T V +AC G G K ++ S
Sbjct: 304 AMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG-KQIETHASE 362
Query: 368 YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
+++ LVD+ + G EEA+ + + N + W A ++A + G A+
Sbjct: 363 LSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEAT-----WNAMITAYAHQGHAK 417
Query: 428 LATL 431
A L
Sbjct: 418 EALL 421
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 164/516 (31%), Positives = 251/516 (48%), Gaps = 44/516 (8%)
Query: 9 LTLLEKCKNMKQLK---QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRI 65
++ L C ++K K Q H + G+D N + ++ + G L K+F +
Sbjct: 419 ISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTL--YAETGYLNECRKIFSSM 476
Query: 66 QHPTVCICNTIIKAFLING-NLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLG 124
N+II A + +L + F N R G + T L A ++L LG
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 125 EMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKV 184
+ IHG + K + + N+LIA Y G+M K+F +
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRM------------------ 578
Query: 185 GDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSIL 244
+D W +MISGY+ N + L L M T D ++ ++L
Sbjct: 579 ------------AERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVL 626
Query: 245 SACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIV 304
SA A + L+ G+ VH RA L + + ++L+DMY+KCG LD A R F++MP R+
Sbjct: 627 SAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY 686
Query: 305 CWNAMISGLAMHGDGIGALKLFSEMEKLG-IKPDDITFIAVFTACSYSGMASEGLKLLDK 363
WN+MISG A HG G ALKLF M+ G PD +TF+ V +ACS++G+ EG K +
Sbjct: 687 SWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFES 746
Query: 364 MFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACC-- 421
M Y + P+ EH+ C+ D+L R G ++ I ++ N L WR L ACC
Sbjct: 747 MSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPN----VLIWRTVLGACCRA 802
Query: 422 NHGQAQLATLAAESLVRLDNPSGL-YVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGC 480
N +A+L AAE L +L+ + + YVL+ N+YAA GR D+ + R MK+ V K G
Sbjct: 803 NGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGY 862
Query: 481 SSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
S V + V F+AG+K+HP D I+ L++++ ++
Sbjct: 863 SWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKM 898
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 152/334 (45%), Gaps = 45/334 (13%)
Query: 17 NMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTI 76
+++ L+Q + SGL + F S +++ + GSL+YA KVF +++ N +
Sbjct: 223 DVRLLEQIMCTIQKSGLLTDLFVGSGLVS--AFAKSGSLSYARKVFNQMETRNAVTLNGL 280
Query: 77 IKAFLINGNLNRTLHVFTNMLRN-GLSPDNYTI------PYALKACAALRDHSLGEMIHG 129
+ + +F +M +SP++Y I Y+L L+ G +HG
Sbjct: 281 MVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKK---GREVHG 337
Query: 130 YSSKLGLL-FDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVD 188
+ GL+ F + +GN L+ MY AK G +
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMY-------------------------------AKCGSIA 366
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
AR F +KD W +MI+G QN CF E + ++ M+ DI P +S LS+CA
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426
Query: 249 HMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNA 308
+ G +H + + L++ +S +L+ +YA+ G L+ +++F SMP+ D V WN+
Sbjct: 427 SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNS 486
Query: 309 MISGLAMHGDGI-GALKLFSEMEKLGIKPDDITF 341
+I LA + A+ F ++ G K + ITF
Sbjct: 487 IIGALARSERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 163/384 (42%), Gaps = 64/384 (16%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
GS+ YA F I+ N+II + G+ +F++M +G P YT +
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 113 KACAALR--DHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLS 170
+L D L E I K GLL D+FVG+ L+
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLV----------------------- 250
Query: 171 AVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQ- 229
S +AK G + AR F++ ++ ++ G V+ +E LF M
Sbjct: 251 --------SAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 230 LTDIGPDESIFVSILSA-----CAHMGALDTGVWVHRY-LNRARLPLSIRLSTSLLDMYA 283
+ D+ P+ +V +LS+ A L G VH + + + + + L++MYA
Sbjct: 303 MIDVSPES--YVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYA 360
Query: 284 KCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIA 343
KCG++ A+R+F M D+D V WN+MI+GL +G I A++ + M + I P T I+
Sbjct: 361 KCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLIS 420
Query: 344 VFTACSYSGMAS-------EGLKL-LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMV 395
++C+ A E LKL +D SV N L+ L + TG+ E
Sbjct: 421 SLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSN---------ALMTLYAETGYLNECRK 471
Query: 396 IIRRITNSNNGSEETLAWRAFLSA 419
I S+ + ++W + + A
Sbjct: 472 IF-----SSMPEHDQVSWNSIIGA 490
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 121/255 (47%), Gaps = 44/255 (17%)
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
D+++ N+LI Y GD V+ARKVFDE+P + VSW+ ++SGY++ G+
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE------------ 82
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDT--G 256
KE L R M I ++ FVS+L AC +G++ G
Sbjct: 83 -------------------HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFG 123
Query: 257 VWVHRYLNRARLPLSIRLSTSLLDMYAKC-GNLDLAKRLFDSMPDRDIVCWNAMISGLAM 315
+H + + + +S L+ MY KC G++ A F + ++ V WN++IS +
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ 183
Query: 316 HGDGIGALKLFSEMEKLGIKPDDITFIA-VFTACSYSGMASEGLKLLDKMFSVYNMEPKS 374
GD A ++FS M+ G +P + TF + V TACS + ++LL+++
Sbjct: 184 AGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTI------ 234
Query: 375 EHYGCLVDLLSRTGF 389
+ G L DL +G
Sbjct: 235 QKSGLLTDLFVGSGL 249
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 192/449 (42%), Gaps = 71/449 (15%)
Query: 25 HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLING 84
H++++ + LD + + + ++ ++ G A KVF + I+ + NG
Sbjct: 24 HSRLYKNRLDKDVYLCNNLIN--AYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNG 81
Query: 85 NLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSL--GEMIHGYSSKLGLLFDIFV 142
L +M++ G+ + Y L+AC + + G IHG KL D V
Sbjct: 82 EHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV 141
Query: 143 GNSLIAMY--CVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEK 200
N LI+MY C+ G + A F +I ++VSW+ +IS Y++ GD
Sbjct: 142 SNVLISMYWKCI-GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGD-------------- 186
Query: 201 DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGV--W 258
Q + F+ +F MQ P E F S+++ + D +
Sbjct: 187 -------------QRSAFR----IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQ 229
Query: 259 VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGD 318
+ + ++ L + + + L+ +AK G+L A+++F+ M R+ V N ++ GL
Sbjct: 230 IMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKW 289
Query: 319 GIGALKLFSEMEKL-GIKPDDITFIAVFTACSYSGMASE-GLK-------------LLDK 363
G A KLF +M + + P+ +++ + ++ +A E GLK L+D
Sbjct: 290 GEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDF 347
Query: 364 MFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNH 423
M + N LV++ ++ G +A + +T+ +++++W + ++ +
Sbjct: 348 MVGIGN---------GLVNMYAKCGSIADARRVFYFMTD-----KDSVSWNSMITGLDQN 393
Query: 424 GQAQLATLAAESLVRLDNPSGLYVLISNL 452
G A +S+ R D G + LIS+L
Sbjct: 394 GCFIEAVERYKSMRRHDILPGSFTLISSL 422
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 241 VSILSAC-AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
+S + +C H GA + H L + RL + L +L++ Y + G+ A+++FD MP
Sbjct: 7 LSFVQSCVGHRGA---ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP 63
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
R+ V W ++SG + +G+ AL +M K GI + F++V AC G
Sbjct: 64 LRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 223/455 (49%), Gaps = 4/455 (0%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
A VF + N +I G L L +F ML + PD YT + AC+A
Sbjct: 157 ALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSA 216
Query: 118 LRDHSL-GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSL 176
+ + G M+H K G + NS+++ Y G A + + I L+ VSW+
Sbjct: 217 DSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNS 276
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPD 236
+I K+G+ + A F PEK+ W MI+GY +N ++ L F M + + D
Sbjct: 277 IIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSD 336
Query: 237 ESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFD 296
+ ++L AC+ + L G +H L + +L+++YAKCG++ A R F
Sbjct: 337 HFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFG 396
Query: 297 SMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASE 356
+ ++D+V WN M+ +HG ALKL+ M GIKPD++TFI + T CS+SG+ E
Sbjct: 397 DIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEE 456
Query: 357 GLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAF 416
G + + M Y + + +H C++D+ R G EA + ++ S +W
Sbjct: 457 GCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETL 516
Query: 417 LSACCNHGQAQLATLAAESLVRLDNPSG--LYVLISNLYAASGRHADVRRVRDVMKNKRV 474
L AC H +L ++ L ++ PS +VL+SNLY ++GR + VR M + +
Sbjct: 517 LGACSTHWHTELGREVSKVL-KIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGM 575
Query: 475 DKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSIL 509
K PGCS +E+ V F+ G+ +HP+++E+ L
Sbjct: 576 KKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETL 610
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 173/411 (42%), Gaps = 40/411 (9%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + A +VF + NT++ ++ G + +FT + + PD+Y+ L
Sbjct: 18 GRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAIL 77
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEI--PSLS 170
CA+L + G I + G + V NSLI MY D ++A KVF ++ S +
Sbjct: 78 STCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRN 137
Query: 171 AVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQL 230
V+W ++ Y + A F E P++ W MISG+ + L LF+ M
Sbjct: 138 EVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLE 197
Query: 231 TDIGPDESIFVSILSAC-AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLD 289
++ PD F S+++AC A + G VH + + ++ S+L Y K G+ D
Sbjct: 198 SEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRD 257
Query: 290 LAKRLFDSM-------------------------------PDRDIVCWNAMISGLAMHGD 318
A R +S+ P+++IV W MI+G +GD
Sbjct: 258 DAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGD 317
Query: 319 GIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYG 378
G AL+ F EM K G+ D + AV ACS + G K++ + +
Sbjct: 318 GEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG-KMIHGCLIHCGFQGYAYVGN 376
Query: 379 CLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
LV+L ++ G +EA I N ++ ++W L A HG A A
Sbjct: 377 ALVNLYAKCGDIKEADRAFGDIAN-----KDLVSWNTMLFAFGVHGLADQA 422
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 38/285 (13%)
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDE 237
I+ AK G + AR FD PE D W M++ Y + +E + LF ++ +D PD+
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 238 SIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLF-- 295
F +ILS CA +G + G + + R+ S+ ++ SL+DMY KC + A ++F
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 296 ---DS----------------------------MPDRDIVCWNAMISGLAMHGDGIGALK 324
DS MP R WN MISG A G L
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 325 LFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLL 384
LF EM + KPD TF ++ ACS +++ + E ++
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFY 250
Query: 385 SRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
++ G ++AM + I ++W + + AC G+ + A
Sbjct: 251 TKLGSRDDAMRELESIEVLTQ-----VSWNSIIDACMKIGETEKA 290
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 32/243 (13%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G A +VF + T+I + NG+ + L F M+++G+ D++ L
Sbjct: 285 GETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVL 344
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
AC+ L G+MIHG G +VGN+L+ +Y GD+ A + F +I + V
Sbjct: 345 HACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLV 404
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
SW+ M+ + G D A L L+ M +
Sbjct: 405 SWNTMLFAFGVHGLADQA-------------------------------LKLYDNMIASG 433
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNR-ARLPLSIRLSTSLLDMYAKCGNLDLA 291
I PD F+ +L+ C+H G ++ G + + + R+PL + T ++DM+ + G+L A
Sbjct: 434 IKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEA 493
Query: 292 KRL 294
K L
Sbjct: 494 KDL 496
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 272 IRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEK 331
+RL++ + + AK G + A+++FD MP+ D V WN M++ + G A+ LF+++
Sbjct: 5 VRLTSKIASL-AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 332 LGIKPDDITFIAVFTACSYSGMASEGLKL 360
KPDD +F A+ + C+ G G K+
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKI 92
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 140/443 (31%), Positives = 227/443 (51%), Gaps = 42/443 (9%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
N ++ + + + ++TL +F M + G D++T+ K C L + G+ +H Y+ K
Sbjct: 486 NAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIK 545
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
G D++V + ++ MY K GD+ A+
Sbjct: 546 SGYDLDLWVSSGILDMY-------------------------------VKCGDMSAAQFA 574
Query: 194 FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGAL 253
FD P D W MISG ++N + ++F M+L + PDE ++ A + + AL
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 634
Query: 254 DTGVWVHR---YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMI 310
+ G +H LN P + TSL+DMYAKCG++D A LF + +I WNAM+
Sbjct: 635 EQGRQIHANALKLNCTNDPF---VGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAML 691
Query: 311 SGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNM 370
GLA HG+G L+LF +M+ LGIKPD +TFI V +ACS+SG+ SE K + M Y +
Sbjct: 692 VGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGI 751
Query: 371 EPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLAT 430
+P+ EHY CL D L R G ++A +I ++ + S +R L+AC G +
Sbjct: 752 KPEIEHYSCLADALGRAGLVKQAENLIESMSMEASAS----MYRTLLAACRVQGDTETGK 807
Query: 431 LAAESLVRLDN-PSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVV 489
A L+ L+ S YVL+SN+YAA+ + +++ R +MK +V K PG S +E+ +
Sbjct: 808 RVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKI 867
Query: 490 MEFIAGEKTHPQMDEIHSILEKM 512
F+ ++++ Q + I+ ++ M
Sbjct: 868 HIFVVDDRSNRQTELIYRKVKDM 890
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 179/408 (43%), Gaps = 43/408 (10%)
Query: 22 KQAHAQVFTSGLDNN-SFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAF 80
+Q H GLD + + S + +C G +A VF + + N++I
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFG---FARTVFDNMSERDLISWNSVIAGI 391
Query: 81 LINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDH-SLGEMIHGYSSKLGLLFD 139
NG + +F +LR GL PD YT+ LKA ++L + SL + +H ++ K+ + D
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 140 IFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPE 199
FV +LI Y M A +F E + V+W+
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWN------------------------ 486
Query: 200 KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWV 259
AM++GY Q++ + L LF LM D+ ++ C + A++ G V
Sbjct: 487 -------AMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV 539
Query: 260 HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDG 319
H Y ++ L + +S+ +LDMY KCG++ A+ FDS+P D V W MISG +G+
Sbjct: 540 HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEE 599
Query: 320 IGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC 379
A +FS+M +G+ PD+ T + A S +G ++ + N
Sbjct: 600 ERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKL-NCTNDPFVGTS 658
Query: 380 LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
LVD+ ++ G ++A + +RI N AW A L HG+ +
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEMMN-----ITAWNAMLVGLAQHGEGK 701
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 200/445 (44%), Gaps = 59/445 (13%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
K HA++ T + F ++ +++ S GSLTYA +VF ++ + N+I+ A+
Sbjct: 59 KCTHARILTFEENPERFLINNLISMYSKC--GSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 82 -----INGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGL 136
+ N+ + +F + ++ + T+ LK C E HGY+ K+GL
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 137 LFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG----DVDLARL 192
D FV +L+ +Y FG + + +F+E+P V W+LM+ Y ++G +DL+
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 193 FFDE--TPEKDKGIWGAMISG--------------------------------YVQNNCF 218
F P + A ISG Y+ + +
Sbjct: 237 FHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQY 296
Query: 219 KEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSL 278
L F M +D+ D+ F+ +L+ + +L G VH + L L + +S SL
Sbjct: 297 SALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSL 356
Query: 279 LDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDD 338
++MY K A+ +FD+M +RD++ WN++I+G+A +G + A+ LF ++ + G+KPD
Sbjct: 357 INMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQ 416
Query: 339 ITFIAVFTACSYSGMASEGLKLLDKMFSVY----NMEPKSEHYGCLVDLLSRTGFFEEAM 394
T +V A S EGL L K V+ N S L+D SR +EA
Sbjct: 417 YTMTSVLKAAS---SLPEGLS-LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Query: 395 VIIRRITNSNNGSEETLAWRAFLSA 419
++ R + + +AW A ++
Sbjct: 473 ILFER------HNFDLVAWNAMMAG 491
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 152/358 (42%), Gaps = 41/358 (11%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
N + +L +G + L F +M+ + + D T L + +LG+ +H + K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
LGL + V NSLI MYC K+ AR
Sbjct: 344 LGLDLMLTVSNSLINMYC-------------------------------KLRKFGFARTV 372
Query: 194 FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHM-GA 252
FD E+D W ++I+G QN E + LF + + PD+ S+L A + +
Sbjct: 373 FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEG 432
Query: 253 LDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISG 312
L VH + + +ST+L+D Y++ + A+ LF+ + D+V WNAM++G
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAG 491
Query: 313 LAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL-LDKMFSVYNME 371
DG LKLF+ M K G + DD T VF C + ++G ++ + S Y+++
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 372 PKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
++D+ + G A I ++ +AW +S C +G+ + A
Sbjct: 552 LWVS--SGILDMYVKCGDMSAAQFAFDSIPVPDD-----VAWTTMISGCIENGEEERA 602
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 118/282 (41%), Gaps = 34/282 (12%)
Query: 18 MKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTII 77
+ Q KQ HA SG D + + S +L + G ++ A F I P T+I
Sbjct: 533 INQGKQVHAYAIKSGYDLDLWVSSGILDM--YVKCGDMSAAQFAFDSIPVPDDVAWTTMI 590
Query: 78 KAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLL 137
+ NG R HVF+ M G+ PD +TI KA + L G IH + KL
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT 650
Query: 138 FDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDET 197
D FVG SL+ MY G + A +F I ++ +W+ M+ G A+ G+
Sbjct: 651 NDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEG---------- 700
Query: 198 PEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGV 257
KE L LF+ M+ I PD+ F+ +LSAC+H G +
Sbjct: 701 ---------------------KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAY 739
Query: 258 WVHRYLN-RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM 298
R ++ + I + L D + G + A+ L +SM
Sbjct: 740 KHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM 781
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 8/207 (3%)
Query: 141 FVGNSLIAMYCVFGDMVAARKV-FDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPE 199
F+ N++ + + G AR + F+E P ++ +IS Y+K G + AR FD+ P+
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLIN--NLISMYSKCGSLTYARRVFDKMPD 102
Query: 200 KDKGIWGAMISGYVQNN-C----FKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALD 254
+D W ++++ Y Q++ C ++ LFR+++ + +L C H G +
Sbjct: 103 RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVW 162
Query: 255 TGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLA 314
H Y + L ++ +L+++Y K G + K LF+ MP RD+V WN M+
Sbjct: 163 ASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYL 222
Query: 315 MHGDGIGALKLFSEMEKLGIKPDDITF 341
G A+ L S G+ P++IT
Sbjct: 223 EMGFKEEAIDLSSAFHSSGLNPNEITL 249
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 244/470 (51%), Gaps = 9/470 (1%)
Query: 43 VLAFCSHPHQGSLTYACKVFQRIQHPTVCIC-NTIIKAFLINGNLNRTLHVFTNMLRNGL 101
+ A+C +G + A VF R I NT+I + NG L + +M NGL
Sbjct: 200 IAAYC---REGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGL 256
Query: 102 SPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARK 161
D ++ L ++L+ +G+ +H K G + FV + ++ +YC G+M A
Sbjct: 257 KWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAES 316
Query: 162 VFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEG 221
+ S S MI GY+ G + A+ FD EK+ +W AM GY+
Sbjct: 317 AHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSV 376
Query: 222 LYLFRLMQLTDIG-PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLD 280
L L R + PD + VS+L AC+ ++ G +H + R + + +L T+ +D
Sbjct: 377 LELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVD 436
Query: 281 MYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDIT 340
MY+KCGN++ A+R+FDS +RD V +NAMI+G A HG + + F +M + G KPD+IT
Sbjct: 437 MYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEIT 496
Query: 341 FIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRI 400
F+A+ +AC + G+ EG K M YN+ P++ HY C++DL + ++A+ ++ I
Sbjct: 497 FMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGI 556
Query: 401 TNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSG-LYVLISNLYAASGRH 459
+ ++ + AFL+AC + +L E L+ ++ +G Y+ I+N YA+SGR
Sbjct: 557 ---DQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRW 613
Query: 460 ADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSIL 509
+++R+R M+ K ++ GCS ID F + + +H + + I+++L
Sbjct: 614 DEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 194/445 (43%), Gaps = 49/445 (11%)
Query: 21 LKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ-HPTVCICNTIIKA 79
L++A VF L+ N ++ + V+A ++ ++ A ++F+ + NT++
Sbjct: 39 LREAR-NVFDEMLERNVYSWNAVIA--AYVKFNNVKEARELFESDNCERDLITYNTLLSG 95
Query: 80 FL-INGNLNRTLHVFTNMLR---NGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLG 135
F +G + + +F M R + + D++T+ +K A L + GE +HG K G
Sbjct: 96 FAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTG 155
Query: 136 LLFDIFVGNSLIAMYCVFGDMVAARKVFDE--IPSLSAVSWSLMISGYAKVGDVDLARLF 193
F +SLI MY G +F+ + + +V+ + MI+ Y + GD+D A
Sbjct: 156 NDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSV 215
Query: 194 FDETPEKDKGI-WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGA 252
F PE + I W +I+GY QN +E L + M+ + DE F ++L+ + + +
Sbjct: 216 FWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKS 275
Query: 253 LDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDL---------------------- 290
L G VH + + + +S+ ++D+Y KCGN+
Sbjct: 276 LKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVG 335
Query: 291 ---------AKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSE-MEKLGIKPDDIT 340
AKRLFDS+ ++++V W AM G L+L + PD +
Sbjct: 336 YSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLV 395
Query: 341 FIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRI 400
++V ACS G ++ + K + VD+ S+ G E A RI
Sbjct: 396 MVSVLGACSLQAYMEPGKEIHGHSLRTGILMDK-KLVTAFVDMYSKCGNVEYA----ERI 450
Query: 401 TNSNNGSEETLAWRAFLSACCNHGQ 425
+S + +T+ + A ++ C +HG
Sbjct: 451 FDS-SFERDTVMYNAMIAGCAHHGH 474
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 39/265 (14%)
Query: 124 GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK 183
G + H S K G N L+ +Y G + AR VFDE+ + SW+ +I+ Y K
Sbjct: 7 GFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVK 66
Query: 184 VGDVDLAR-LFFDETPEKDKGIWGAMISGYVQNN-CFKEGLYLFRLM---QLTDIGPDES 238
+V AR LF + E+D + ++SG+ + + C E + +F M + DI D+
Sbjct: 67 FNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDF 126
Query: 239 IFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKC------------- 285
+++ A + + G +H L + + +SL+ MY+KC
Sbjct: 127 TVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGS 186
Query: 286 --------------------GNLDLAKRLFDSMPD-RDIVCWNAMISGLAMHGDGIGALK 324
G++D A +F P+ D + WN +I+G A +G ALK
Sbjct: 187 CVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALK 246
Query: 325 LFSEMEKLGIKPDDITFIAVFTACS 349
+ ME+ G+K D+ +F AV S
Sbjct: 247 MAVSMEENGLKWDEHSFGAVLNVLS 271
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 238/486 (48%), Gaps = 39/486 (8%)
Query: 32 GLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLH 91
G N+ F S VL + G + A +F ++ V T++ F G + +
Sbjct: 146 GYKNDVFVCSSVLNL--YMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVE 203
Query: 92 VFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYC 151
+ M G D + L+A L D +G +HGY + GL ++ V SL+ MY
Sbjct: 204 FYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMY- 262
Query: 152 VFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISG 211
AKVG +++A F K WG++ISG
Sbjct: 263 ------------------------------AKVGFIEVASRVFSRMMFKTAVSWGSLISG 292
Query: 212 YVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLS 271
+ QN + MQ PD V +L AC+ +G+L TG VH Y+ + R L
Sbjct: 293 FAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILK-RHVLD 351
Query: 272 IRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEK 331
+T+L+DMY+KCG L ++ +F+ + +D+VCWN MIS +HG+G + LF +M +
Sbjct: 352 RVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTE 411
Query: 332 LGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFE 391
I+PD TF ++ +A S+SG+ +G M + Y ++P +HY CL+DLL+R G E
Sbjct: 412 SNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVE 471
Query: 392 EAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPS-GLYVLIS 450
EA+ +I NS W A LS C NH + +AA +++L+ S G+ L+S
Sbjct: 472 EALDMI----NSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVS 527
Query: 451 NLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILE 510
N +A + + +V +VR +M+N ++K PG S++E++G + F+ + +H + + +L
Sbjct: 528 NFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLR 587
Query: 511 KMHLQL 516
+ ++
Sbjct: 588 NLKTEI 593
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 192/425 (45%), Gaps = 41/425 (9%)
Query: 4 CSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSR-VLAFCSHPHQGSLTYACKVF 62
C KR L K + + Q HA V ++G N ++SR ++A C G ++YA KVF
Sbjct: 16 CPKRIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRI--GEISYARKVF 73
Query: 63 QRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHS 122
+ V + N++I + N + L ++ M+ + PD+ T +KAC +
Sbjct: 74 DELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLE 133
Query: 123 LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYA 182
GE + + G D+FV +S++ +Y G M A +F ++ + W+ M++G+A
Sbjct: 134 KGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFA 193
Query: 183 KVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVS 242
+ G A F+ E +QN F G D + +
Sbjct: 194 QAGKSLKAVEFYRE----------------MQNEGF---------------GRDRVVMLG 222
Query: 243 ILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRD 302
+L A +G G VH YL R LP+++ + TSL+DMYAK G +++A R+F M +
Sbjct: 223 LLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKT 282
Query: 303 IVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLD 362
V W ++ISG A +G A + EM+ LG +PD +T + V ACS G G +
Sbjct: 283 AVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHC 342
Query: 363 KMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCN 422
+ + ++ + L+D+ S+ G + I + G ++ + W +S
Sbjct: 343 YILKRHVLDRVTA--TALMDMYSKCGALSSSREIFEHV-----GRKDLVCWNTMISCYGI 395
Query: 423 HGQAQ 427
HG Q
Sbjct: 396 HGNGQ 400
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 220/438 (50%), Gaps = 40/438 (9%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + A VF R++ V +I + +G++ L + M G+ P+ TI +
Sbjct: 267 GRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLV 326
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
C + G+ +HG++ + + DI + SLI+MY
Sbjct: 327 SVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY---------------------- 364
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
AK VDL F + G W A+I+G VQN + L LF+ M+ D
Sbjct: 365 ---------AKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED 415
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
+ P+ + S+L A A + L + +H YL + S+ +T L+ +Y+KCG L+ A
Sbjct: 416 VEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAH 475
Query: 293 RLFDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTAC 348
++F+ + ++ D+V W A+ISG MHGDG AL++F EM + G+ P++ITF + AC
Sbjct: 476 KIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNAC 535
Query: 349 SYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSE 408
S+SG+ EGL L M Y +S HY C+VDLL R G +EA +I I +
Sbjct: 536 SHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTST- 594
Query: 409 ETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRD 467
W A L+AC H QL +AA L L+ +G YVL++N+YAA GR D+ +VR
Sbjct: 595 ---VWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRS 651
Query: 468 VMKNKRVDKAPGCSSVEI 485
+M+N + K PG S++EI
Sbjct: 652 MMENVGLRKKPGHSTIEI 669
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 158/337 (46%), Gaps = 40/337 (11%)
Query: 16 KNMKQLKQAHAQVFTSGLDNNSF--ALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCIC 73
+++ + K H V T G + LS A C H +TYA K+F+ + ++
Sbjct: 29 QSISKTKALHCHVITGGRVSGHILSTLSVTYALCGH-----ITYARKLFEEMPQSSLLSY 83
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLS--PDNYTIPYALKACAALRDHSLGEMIHGYS 131
N +I+ ++ G + + VF M+ G+ PD YT P+ KA L+ LG ++HG
Sbjct: 84 NIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRI 143
Query: 132 SKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLAR 191
+ D +V N+L+AMY FG V++AR
Sbjct: 144 LRSWFGRDKYVQNALLAMYMNFGK-------------------------------VEMAR 172
Query: 192 LFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMG 251
FD +D W MISGY +N + L +F M + D + VS+L C H+
Sbjct: 173 DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLK 232
Query: 252 ALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMIS 311
L+ G VH+ + RL I + +L++MY KCG +D A+ +FD M RD++ W MI+
Sbjct: 233 DLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMIN 292
Query: 312 GLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTAC 348
G GD AL+L M+ G++P+ +T ++ + C
Sbjct: 293 GYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 8/251 (3%)
Query: 181 YAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG--PDES 238
YA G + AR F+E P+ + +I YV+ + + + +F M + PD
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 239 IFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM 298
+ + A + ++ G+ VH + R+ + +LL MY G +++A+ +FD M
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 299 PDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGL 358
+RD++ WN MISG +G AL +F M + D T +++ C + G
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG- 237
Query: 359 KLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLS 418
+ + K+ + K E LV++ + G +EA + R+ + + W ++
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMER-----RDVITWTCMIN 292
Query: 419 ACCNHGQAQLA 429
G + A
Sbjct: 293 GYTEDGDVENA 303
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/348 (37%), Positives = 199/348 (57%), Gaps = 7/348 (2%)
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
D N++I Y M A +F E+P+ A SW++M+SGYA VG+V+LAR +F++TP
Sbjct: 311 DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTP 370
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVW 258
EK W ++I+ Y +N +KE + LF M + PD S+LSA + L G+
Sbjct: 371 EKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQ 430
Query: 259 VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP-DRDIVCWNAMISGLAMHG 317
+H+ + + +P + + +L+ MY++CG + ++R+FD M R+++ WNAMI G A HG
Sbjct: 431 MHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHG 489
Query: 318 DGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHY 377
+ AL LF M+ GI P ITF++V AC+++G+ E M SVY +EP+ EHY
Sbjct: 490 NASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHY 549
Query: 378 GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLV 437
LV++ S G FEEAM II S + W A L AC + LA +AAE++
Sbjct: 550 SSLVNVTSGQGQFEEAMYII----TSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMS 605
Query: 438 RLDNPSGL-YVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVE 484
RL+ S YVL+ N+YA G + +VR M++KR+ K G S V+
Sbjct: 606 RLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 178/434 (41%), Gaps = 73/434 (16%)
Query: 15 CKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICN 74
C ++ L++A ++F +SF+ + +++ + + A +F+++ +
Sbjct: 115 CGGIRFLEEAR-KLFDEMPSRDSFSWNTMIS--GYAKNRRIGEALLLFEKMPERNAVSWS 171
Query: 75 TIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGE---MIHGYS 131
+I F NG ++ + +F M P + P +++ L E ++ Y
Sbjct: 172 AMITGFCQNGEVDSAVVLFRKM------PVKDSSPLCALVAGLIKNERLSEAAWVLGQYG 225
Query: 132 SKLGLLFD-IFVGNSLIAMYCVFGDMVAARKVFDEIPSL---------------SAVSWS 175
S + D ++ N+LI Y G + AAR +FD+IP L + VSW+
Sbjct: 226 SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWN 285
Query: 176 LMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGP 235
MI Y KVGDV ARL FD+ ++D W MI GYV + ++ LF
Sbjct: 286 SMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALF---------- 335
Query: 236 DESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLF 295
+ M D W ++ YA GN++LA+ F
Sbjct: 336 ------------SEMPNRDAHSW-----------------NMMVSGYASVGNVELARHYF 366
Query: 296 DSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMAS 355
+ P++ V WN++I+ + D A+ LF M G KPD T ++ +A +G+ +
Sbjct: 367 EKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAS--TGLVN 424
Query: 356 EGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRA 415
L + V + P + L+ + SR G E+ RRI + E + W A
Sbjct: 425 LRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMES----RRIFDEMKLKREVITWNA 480
Query: 416 FLSACCNHGQAQLA 429
+ HG A A
Sbjct: 481 MIGGYAFHGNASEA 494
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 180/467 (38%), Gaps = 93/467 (19%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + A +F++++ NT+I ++ +N+ +F M + + N
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN------- 106
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
MI GY S G+ F + ARK+FDE+PS +
Sbjct: 107 ------------TMISGYVSCGGIRF-----------------LEEARKLFDEMPSRDSF 137
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
SW+ MISGYAK + A L F++ PE++ W AMI+G+ QN + LFR M + D
Sbjct: 138 SWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKD 197
Query: 233 IGPDESIFVSILS---------ACAHMGALDTG----VWVHRYL---------------- 263
P ++ ++ G+L +G V+ + L
Sbjct: 198 SSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCL 257
Query: 264 ---------------NRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNA 308
R R ++ S++ Y K G++ A+ LFD M DRD + WN
Sbjct: 258 FDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNT 317
Query: 309 MISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVY 368
MI G A LFSEM ++ SG AS G L + +
Sbjct: 318 MIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMV---------SGYASVGNVELARHYFEK 368
Query: 369 NMEPKSEHYGCLVDLLSRTGFFEEAM-VIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
E + + ++ + ++EA+ + IR TL + LSA +
Sbjct: 369 TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLT--SLLSASTGLVNLR 426
Query: 428 LATLAAESLVRLDNPS-GLYVLISNLYAASGRHADVRRVRDVMKNKR 473
L + +V+ P ++ + +Y+ G + RR+ D MK KR
Sbjct: 427 LGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKR 473
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 11/162 (6%)
Query: 270 LSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEM 329
L R + L+ + G + A+ +F+ + R+ V WN MISG + A KLF M
Sbjct: 38 LGFRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM 97
Query: 330 EKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGF 389
K + + T I+ + +C E KL D+M S S + ++ ++
Sbjct: 98 PKRDVVTWN-TMISGYVSCGGIRFLEEARKLFDEMPS-----RDSFSWNTMISGYAKNRR 151
Query: 390 FEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATL 431
EA+++ ++ N ++W A ++ C +G+ A +
Sbjct: 152 IGEALLLFEKMPERN-----AVSWSAMITGFCQNGEVDSAVV 188
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/441 (34%), Positives = 237/441 (53%), Gaps = 11/441 (2%)
Query: 49 HPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTI 108
+ G + A ++F +I + T+I L L+ L +T MLR G+ P +
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 109 PYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPS 168
L A A S G +HG K G F+ ++I Y V D+ A + F+
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 169 LSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFR-L 227
S + +I+G+ K G V+ AR FD+T +KD W AMISGY Q+ + L+LFR +
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREM 428
Query: 228 MQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGN 287
+ + + PD VS+ SA + +G+L+ G H YLN + +P + L+ +++DMYAKCG+
Sbjct: 429 ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGS 488
Query: 288 LDLAKRLF---DSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAV 344
++ A +F ++ I WNA+I G A HG AL L+S+++ L IKP+ ITF+ V
Sbjct: 489 IETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGV 548
Query: 345 FTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSN 404
+AC ++G+ G + M S + +EP +HYGC+VDLL + G EEA +I+++
Sbjct: 549 LSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPV-- 606
Query: 405 NGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPS--GLYVLISNLYAASGRHADV 462
+ + W LSA HG ++A LAA L +D PS G V++SN+YA +GR DV
Sbjct: 607 --KADVMIWGMLLSASRTHGNVEIAELAATELAAID-PSHGGCKVMLSNVYADAGRWEDV 663
Query: 463 RRVRDVMKNKRVDKAPGCSSV 483
VR+ M+ + V+ + S V
Sbjct: 664 ALVREEMRTRDVEWSRAFSGV 684
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 208/470 (44%), Gaps = 66/470 (14%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVL--------------AFCSHPHQGSLTY---------- 57
+Q H +V SGLD+N + + VL F H S ++
Sbjct: 61 RQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRS 120
Query: 58 -----ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
A K+F + + T+IK + N + + +F M G+ + T+ +
Sbjct: 121 RRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVI 180
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
AC+ L M+ + KL L +FV +L+ MYC+ + ARK+FDE+P + V
Sbjct: 181 SACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLV 240
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
+W++M++GY+K G ++ A FD+ EKD WG MI G ++ N E L + M
Sbjct: 241 TWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCG 300
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYL----------------------NRARLPL 270
+ P E + V +LSA A G+ +H + N +L L
Sbjct: 301 MKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLAL 360
Query: 271 S---------IRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG 321
I +L+ + K G ++ A+ +FD D+DI WNAMISG A
Sbjct: 361 QQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQL 420
Query: 322 ALKLFSEM-EKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCL 380
AL LF EM +KPD IT ++VF+A S G EG + D + + + P +
Sbjct: 421 ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL-NFSTIPPNDNLTAAI 479
Query: 381 VDLLSRTGFFEEAMVIIRRITNSNNGSEETLA-WRAFLSACCNHGQAQLA 429
+D+ ++ G E A+ I + + N S T++ W A + HG A+LA
Sbjct: 480 IDMYAKCGSIETALNIFHQ---TKNISSSTISPWNAIICGSATHGHAKLA 526
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 152/449 (33%), Positives = 230/449 (51%), Gaps = 41/449 (9%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + A KVF + V N +I ++ NG+ V + L +S T+ +
Sbjct: 95 GCVVSARKVFDEMPERNVATWNAMIGGYMSNGDA-----VLASGLFEEISVCRNTVTWI- 148
Query: 113 KACAALRDHSLGEMIHGYSSKLGL-------------LFDIFVGNSLIAMYCVFGDMVAA 159
EMI GY ++ + L ++ + ++ +Y M A
Sbjct: 149 ------------EMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDA 196
Query: 160 RKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFK 219
RK F++IP +A WSLM+SGY ++GDV AR F +D IW +I+GY QN
Sbjct: 197 RKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSD 256
Query: 220 EGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLL 279
+ + F MQ PD SILSACA G LD G VH +N + L+ +S +L+
Sbjct: 257 DAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALI 316
Query: 280 DMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDI 339
DMYAKCG+L+ A +F+S+ R + C N+MIS LA+HG G AL++FS ME L +KPD+I
Sbjct: 317 DMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEI 376
Query: 340 TFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRR 399
TFIAV TAC + G EGLK+ +M +++P +H+GCL+ LL R+G +EA +++
Sbjct: 377 TFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKE 435
Query: 400 ITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLY-----VLISNLYA 454
+ N + A L AC H ++A + + + + Y ISNLYA
Sbjct: 436 MHVKPNDT----VLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYA 491
Query: 455 ASGRHADVRRVRDVMKNKRVDKAPGCSSV 483
+ R +R M+ + ++K+PG SS+
Sbjct: 492 HTERWQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 182/384 (47%), Gaps = 45/384 (11%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHS-LGEMIHGYSS 132
+ +IK + G+ + L ++ + R G+ + +P L+ACA + LG+++H S
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGW-VPLILRACACVVPRVVLGKLLHSESI 73
Query: 133 KLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARL 192
K G+ D+ VG+SLI+MY G +V+ARKVFDE+P + +W+ MI GY GD LA
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 193 FFDETPE-KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMG 251
F+E ++ W MI GY + ++ LF M P E V S
Sbjct: 134 LFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM------PFELKNVKAWSVM---- 183
Query: 252 ALDTGVWV-HRYLNRAR-----LPLSIRLSTSL-LDMYAKCGNLDLAKRLFDSMPDRDIV 304
GV+V +R + AR +P SL + Y + G++ A+ +F + RD+V
Sbjct: 184 ---LGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLV 240
Query: 305 CWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKM 364
WN +I+G A +G A+ F M+ G +PD +T ++ +AC+ SG G + + +
Sbjct: 241 IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVG-REVHSL 299
Query: 365 FSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCN-- 422
+ +E L+D+ ++ G E A + E+++ R+ ACCN
Sbjct: 300 INHRGIELNQFVSNALIDMYAKCGDLENATSVF-----------ESISVRSV--ACCNSM 346
Query: 423 ------HGQAQLATLAAESLVRLD 440
HG+ + A ++ LD
Sbjct: 347 ISCLAIHGKGKEALEMFSTMESLD 370
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 140/430 (32%), Positives = 230/430 (53%), Gaps = 37/430 (8%)
Query: 89 TLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIA 148
+L M+ L PD++ +P A K+CA L +G +H S K G D+FVG+SL+
Sbjct: 100 SLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVD 159
Query: 149 MYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAM 208
MY G++V ARK+FDE+P + V+WS M+ GYA++G E ++ +W
Sbjct: 160 MYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMG-------------ENEEALW--- 203
Query: 209 ISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARL 268
FKE L+ ++ ++ F S++S CA+ L+ G +H ++
Sbjct: 204 --------LFKEALF-------ENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSF 248
Query: 269 PLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSE 328
S + +SL+ +Y+KCG + A ++F+ +P +++ WNAM+ A H ++LF
Sbjct: 249 DSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKR 308
Query: 329 MEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTG 388
M+ G+KP+ ITF+ V ACS++G+ EG D+M +EP +HY LVD+L R G
Sbjct: 309 MKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAG 367
Query: 389 FFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDN-PSGLYV 447
+EA+ + ITN E++ W A L++C H +LA AA+ + L SG+++
Sbjct: 368 RLQEALEV---ITNMPIDPTESV-WGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHI 423
Query: 448 LISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHS 507
+SN YAA GR D + R +++++ K G S VE V F AGE+ H + EI+
Sbjct: 424 SLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYE 483
Query: 508 ILEKMHLQLD 517
L ++ +++
Sbjct: 484 KLAELGEEME 493
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 134/316 (42%), Gaps = 37/316 (11%)
Query: 112 LKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSA 171
L + A R G +HGY K GL V N+LI Y ++ FD
Sbjct: 22 LLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYS------KSQLPFD------- 68
Query: 172 VSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
+R F+++P+K W ++IS + QN L + M
Sbjct: 69 ------------------SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAG 110
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
++ PD+ + S +CA + D G VH + + + +SL+DMYAKCG + A
Sbjct: 111 NLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYA 170
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYS 351
+++FD MP R++V W+ M+ G A G+ AL LF E + +D +F +V + C+ S
Sbjct: 171 RKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANS 230
Query: 352 GMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETL 411
+ G + + + + + S LV L S+ G E A + + N G
Sbjct: 231 TLLELG-RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLG----- 284
Query: 412 AWRAFLSACCNHGQAQ 427
W A L A H Q
Sbjct: 285 IWNAMLKAYAQHSHTQ 300
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 147/493 (29%), Positives = 245/493 (49%), Gaps = 8/493 (1%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
+Q H V G D++ F + ++ + + ++ A KVF + V N++I +
Sbjct: 152 RQVHGFVIRGGFDSDVFVGNGMITY--YTKCDNIESARKVFDEMSERDVVSWNSMISGYS 209
Query: 82 INGNLNRTLHVFTNMLR-NGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDI 140
+G+ ++ ML + P+ T+ +AC D G +H + + D+
Sbjct: 210 QSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDL 269
Query: 141 FVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEK 200
+ N++I Y G + AR +FDE+ +V++ +ISGY G V A F E
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
Query: 201 DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVH 260
W AMISG +QNN +E + FR M P+ S+L + + L G +H
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 261 RYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGI 320
+ R +I ++TS++D YAK G L A+R+FD+ DR ++ W A+I+ A+HGD
Sbjct: 390 AFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSD 449
Query: 321 GALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCL 380
A LF +M+ LG KPDD+T AV +A ++SG + + D M + Y++EP EHY C+
Sbjct: 450 SACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACM 509
Query: 381 VDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD 440
V +LSR G +AM I ++ W A L+ G ++A A + L ++
Sbjct: 510 VSVLSRAGKLSDAMEFISKMPIDPIAK----VWGALLNGASVLGDLEIARFACDRLFEME 565
Query: 441 -NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTH 499
+G Y +++NLY +GR + VR+ MK + K PG S +E + + FIA + +
Sbjct: 566 PENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSC 625
Query: 500 PQMDEIHSILEKM 512
+ E++ I+E +
Sbjct: 626 ERSKEMYEIIEGL 638
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 209/500 (41%), Gaps = 83/500 (16%)
Query: 23 QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLI 82
Q HA++ + ++F S++++F + Q A VF I N ++ A+
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISF--YTRQDRFRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 83 NGNLNRTLHVFTNML------RNGLSPDNYTIPYALKACAALRDHSLGEM---IHGYSSK 133
+F + + + PD+ +I LKA + D LG + +HG+ +
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIR 160
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
G D+FVGN +I Y ++ +ARKVFDE+ VSW+ MISGY++ G
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSF------ 214
Query: 194 FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGAL 253
E K ++ AM++ +D P+ +S+ AC L
Sbjct: 215 -----EDCKKMYKAMLA-------------------CSDFKPNGVTVISVFQACGQSSDL 250
Query: 254 DTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGL 313
G+ VH+ + + + + L +++ YAKCG+LD A+ LFD M ++D V + A+ISG
Sbjct: 251 IFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGY 310
Query: 314 AMHGDGIGALKLFSEMEKLGI-------------------------------KPDDITFI 342
HG A+ LFSEME +G+ +P+ +T
Sbjct: 311 MAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLS 370
Query: 343 AVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC-LVDLLSRTGFFEEAMVIIRRIT 401
++ + +YS G ++ F++ N + + ++D ++ GF A +
Sbjct: 371 SLLPSLTYSSNLKGGKEI--HAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVF---- 424
Query: 402 NSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNL--YAASGRH 459
N +AW A ++A HG + A + + L L + L +A SG
Sbjct: 425 -DNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDS 483
Query: 460 ADVRRVRDVMKNKRVDKAPG 479
+ + D M K D PG
Sbjct: 484 DMAQHIFDSMLTK-YDIEPG 502
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
L L N+K K+ HA +G DNN + + ++ ++ G L A +VF +
Sbjct: 373 LPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIID--NYAKLGFLLGAQRVFDNCKDR 430
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
++ II A+ ++G+ + +F M G PD+ T+ L A A D + + H
Sbjct: 431 SLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQ--H 488
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLS-------AVSWSLMISGY 181
+ S L +DI G A C+ + A K+ D + +S A W +++G
Sbjct: 489 IFDSML-TKYDIEPGVEHYA--CMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGA 545
Query: 182 AKVGDVDLARL----FFDETPEKDKGIWGAMISGYVQNNCFKEG 221
+ +GD+++AR F+ PE + G + M + Y Q ++E
Sbjct: 546 SVLGDLEIARFACDRLFEMEPE-NTGNYTIMANLYTQAGRWEEA 588
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/458 (32%), Positives = 230/458 (50%), Gaps = 53/458 (11%)
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLS-PDNYTIPYALKACAALRDHSL-G 124
H N +K +L +G + L F + R S D++++ +A+K +A + SL G
Sbjct: 25 HTKSLKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDG 84
Query: 125 EMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKV 184
IH KLG I + SL+ Y + V
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFY-------------------------------SSV 113
Query: 185 GDVDLARLFFDETPEKDKGI-WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
GDVD AR FDETPEK + W AMIS Y +N E + LF+ M+ I D I
Sbjct: 114 GDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 244 LSACAHMGALDTGVWVH-RYLNRAR-LPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR 301
LSACA +GA+ G ++ R + R R L + + L SLL+MY K G + A++LFD +
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRK 233
Query: 302 DIVCWNAMISGLAMHGDGIGALKLFSEMEKLG------IKPDDITFIAVFTACSYSGMAS 355
D+ + +MI G A++G +L+LF +M+ + I P+D+TFI V ACS+SG+
Sbjct: 234 DVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVE 293
Query: 356 EGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRA 415
EG + M YN++P+ H+GC+VDL R+G ++A I ++ N T+ WR
Sbjct: 294 EGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN----TVIWRT 349
Query: 416 FLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRV 474
L AC HG +L + LD + G YV +SN+YA+ G + ++RD ++ +R+
Sbjct: 350 LLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRM 409
Query: 475 DKAPGCSSVEIDGVVMEFIAGEKTHPQ---MDEIHSIL 509
PG S +E+ ++ EF++G + + M EI +L
Sbjct: 410 ---PGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVL 444
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 156/360 (43%), Gaps = 57/360 (15%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRI-QHPTVCICNTIIKAF 80
+Q HA V G + + ++ F S G + YA +VF + + + +I A+
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFYSSV--GDVDYARQVFDETPEKQNIVLWTAMISAY 142
Query: 81 LINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYS--SKLGLLF 138
N N + +F M + D + AL ACA L +GE I+ S K L
Sbjct: 143 TENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAM 202
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
D+ + NSL+ MY G+ ARK+FDE +
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDE-------------------------------SM 231
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD------IGPDESIFVSILSACAHMGA 252
KD + +MI GY N +E L LF+ M+ D I P++ F+ +L AC+H G
Sbjct: 232 RKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGL 291
Query: 253 LDTGVWVHRYLNRARLPLSIRLSTS----LLDMYAKCGNLDLAKRLFDSMPDR-DIVCWN 307
++ G R+ + +++ + ++D++ + G+L A + MP + + V W
Sbjct: 292 VEEG---KRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWR 348
Query: 308 AMISGLAMHGDGIGALKLFSEMEK--LGIKPDDI-TFIAVFTACSYSGMASEGLKLLDKM 364
++ ++HG+ ++L E+++ + D + ++A+ + GM E K+ D++
Sbjct: 349 TLLGACSLHGN----VELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRV 404
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 164/568 (28%), Positives = 254/568 (44%), Gaps = 77/568 (13%)
Query: 14 KCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCIC 73
+ N+ + HA + L ++ + S +L + G + +C+VF +
Sbjct: 120 QSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDM--YKRVGKIDKSCRVFSEMPFRNAVTW 177
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
II + G L F+ M R+ D YT ALKACA LR G+ IH +
Sbjct: 178 TAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIV 237
Query: 134 LGLLFDIFVGNSLIAMY----------CVFGDM------------VAARKVFDEI----- 166
G + + V NSL MY C+F +M VA +++ E+
Sbjct: 238 RGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVET 297
Query: 167 -----------------------PSLSAVSW---------------SLMISG-----YAK 183
SLS + W SL +S Y+
Sbjct: 298 FIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYST 357
Query: 184 VGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
G++ A + F +D W +I GY Q +EG F M+ + P + S+
Sbjct: 358 CGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASL 417
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI 303
LS +M ++ G VH L + + +SL++MY+KCG++ A +F DI
Sbjct: 418 LSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDI 477
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDK 363
V AMI+G A HG A+ LF + K+G +PD +TFI+V TAC++SG G +
Sbjct: 478 VSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNM 537
Query: 364 MFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNH 423
M YNM P EHYGC+VDLL R G +A ++ N + ++ + W L AC
Sbjct: 538 MQETYNMRPAKEHYGCMVDLLCRAGRLSDA----EKMINEMSWKKDDVVWTTLLIACKAK 593
Query: 424 GQAQLATLAAESLVRLDNP-SGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSS 482
G + AAE ++ LD + V ++N+Y+++G + VR MK K V K PG SS
Sbjct: 594 GDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSS 653
Query: 483 VEIDGVVMEFIAGEKTHPQMDEIHSILE 510
++I V F++G++ HPQ ++I++ILE
Sbjct: 654 IKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 143/299 (47%), Gaps = 33/299 (11%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNM--LRNGLSPDNYTIPY 110
G+L A +VF ++ H + +IIK ++ N + L +F+ M + + +SPD +
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 111 ALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLS 170
LKAC + + GE +H Y+ K LL ++VG+SL+ MY
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMY-------------------- 153
Query: 171 AVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQL 230
+VG +D + F E P ++ W A+I+G V +KEGL F M
Sbjct: 154 -----------KRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSR 202
Query: 231 TDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDL 290
++ D F L ACA + + G +H ++ ++ ++ SL MY +CG +
Sbjct: 203 SEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQD 262
Query: 291 AKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
LF++M +RD+V W ++I G + A++ F +M + P++ TF ++F+AC+
Sbjct: 263 GLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 131/320 (40%), Gaps = 50/320 (15%)
Query: 10 TLLEKCKNMKQL---KQAHAQVFTSGLDNN---SFALSRVLAFCSHPHQGSLTYACKVFQ 63
++ C ++ +L +Q H V + GL+++ S ++ ++ + C G+L A +FQ
Sbjct: 315 SMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTC-----GNLVSASVLFQ 369
Query: 64 RIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSL 123
++ + +TII + G F+ M ++G P ++ + L +
Sbjct: 370 GMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEG 429
Query: 124 GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK 183
G +H + GL + V +SLI MY G + A +F E VS + MI+GYA+
Sbjct: 430 GRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAE 489
Query: 184 VGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
G KE + LF PD F+S+
Sbjct: 490 HGKS-------------------------------KEAIDLFEKSLKVGFRPDSVTFISV 518
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTS----LLDMYAKCGNLDLAKRLFDSMP 299
L+AC H G LD G Y N + ++R + ++D+ + G L A+++ + M
Sbjct: 519 LTACTHSGQLDLGF---HYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMS 575
Query: 300 -DRDIVCWNAMISGLAMHGD 318
+D V W ++ GD
Sbjct: 576 WKKDDVVWTTLLIACKAKGD 595
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 193/342 (56%), Gaps = 6/342 (1%)
Query: 144 NSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKG 203
N+L+ GD+V A+K+FDE+P +S++ MI GYAK GD+ AR F+E D
Sbjct: 211 NALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVR 270
Query: 204 IWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYL 263
W A+I GY QN E +F M ++ PDE I V ++SAC+ MG + V YL
Sbjct: 271 AWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYL 330
Query: 264 NRARLPLSIR-LSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGA 322
++ S + +L+DM AKCG++D A +LF+ MP RD+V + +M+ G+A+HG G A
Sbjct: 331 HQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEA 390
Query: 323 LKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVD 382
++LF +M GI PD++ F + C S + EGL+ + M Y++ +HY C+V+
Sbjct: 391 IRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVN 450
Query: 383 LLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNP 442
LLSRTG +EA +I+ + + S AW + L C HG ++A + A L L+
Sbjct: 451 LLSRTGKLKEAYELIKSMPFEAHAS----AWGSLLGGCSLHGNTEIAEVVARHLFELEPQ 506
Query: 443 S-GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSV 483
S G YVL+SN+YAA R DV +RD M + K G S +
Sbjct: 507 SAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 184/389 (47%), Gaps = 49/389 (12%)
Query: 10 TLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPT 69
TL + CK+ L Q HA++ GL+ + L + S SL+Y+ VF+R+ P
Sbjct: 15 TLFKLCKSEIHLNQIHARIIRKGLEQDQ-NLISIFISSSSSSSSSLSYSSSVFERVPSPG 73
Query: 70 VCICNTIIKAFLINGNLNRTLHVFTNMLRNGLS-PDNYTIPYALKACAALRDHSLGEMIH 128
+ N +IK + T+ + M+R GL+ PD YT P +K C+ +G +H
Sbjct: 74 TYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVH 133
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVD 188
G ++G D+ VG S + Y D+ +ARKVF E+P +AVSW+ ++ Y K G+++
Sbjct: 134 GLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELE 193
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
A+ FD PE++ G W A++ G V++ LF M DI +S
Sbjct: 194 EAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI-------ISY----- 241
Query: 249 HMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNA 308
TS++D YAK G++ A+ LF+ D+ W+A
Sbjct: 242 ---------------------------TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSA 274
Query: 309 MISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVY 368
+I G A +G A K+FSEM +KPD+ + + +ACS G +L +K+ S
Sbjct: 275 LILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGC----FELCEKVDSYL 330
Query: 369 N--MEPKSEHY--GCLVDLLSRTGFFEEA 393
+ M S HY L+D+ ++ G + A
Sbjct: 331 HQRMNKFSSHYVVPALIDMNAKCGHMDRA 359
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 40/272 (14%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + A +F+ + V + +I + NG N VF+ M + PD + + +
Sbjct: 252 GDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLM 311
Query: 113 KACAALRDHSLGEMIHGY-SSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSA 171
AC+ + L E + Y ++ +V +LI M G M A K+F+E+P
Sbjct: 312 SACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDL 371
Query: 172 VSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
VS+ M+ G A G C E + LF M
Sbjct: 372 VSYCSMMEGMAIHG-------------------------------CGSEAIRLFEKMVDE 400
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLS----TSLLDMYAKCGN 287
I PDE F IL C ++ G+ RY R SI S + ++++ ++ G
Sbjct: 401 GIVPDEVAFTVILKVCGQSRLVEEGL---RYFELMRKKYSILASPDHYSCIVNLLSRTGK 457
Query: 288 LDLAKRLFDSMP-DRDIVCWNAMISGLAMHGD 318
L A L SMP + W +++ G ++HG+
Sbjct: 458 LKEAYELIKSMPFEAHASAWGSLLGGCSLHGN 489
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 232/458 (50%), Gaps = 18/458 (3%)
Query: 54 SLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALK 113
+L A +VF ++ N II A NG TL +F +MLR+ + PD +T LK
Sbjct: 432 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 491
Query: 114 ACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVS 173
AC G IH K G+ + VG SLI MY G + A K+ + VS
Sbjct: 492 ACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 550
Query: 174 WSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDI 233
G ++ ++ ++ W ++ISGYV ++ LF M I
Sbjct: 551 -----------GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGI 599
Query: 234 GPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKR 293
PD+ + ++L CA++ + G +H + + L + + ++L+DMY+KCG+L ++
Sbjct: 600 TPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRL 659
Query: 294 LFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGM 353
+F+ RD V WNAMI G A HG G A++LF M IKP+ +TFI++ AC++ G+
Sbjct: 660 MFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGL 719
Query: 354 ASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAW 413
+GL+ M Y ++P+ HY +VD+L ++G + A+ +IR + + + W
Sbjct: 720 IDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMP----FEADDVIW 775
Query: 414 RAFLSACCNH-GQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKN 471
R L C H ++A A +L+RLD S Y L+SN+YA +G V +R M+
Sbjct: 776 RTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRG 835
Query: 472 KRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSIL 509
++ K PGCS VE+ + F+ G+K HP+ +EI+ L
Sbjct: 836 FKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEEL 873
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 200/486 (41%), Gaps = 103/486 (21%)
Query: 22 KQAHAQVFTSGLDNNSFAL--------------SRVLAFCSHPHQGSLTY---------- 57
KQAHA + SG +F L S + F P + +++
Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKS 127
Query: 58 -----ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
A F + V N+++ +L NG +++ VF +M R G+ D T L
Sbjct: 128 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 187
Query: 113 KACAALRDHSLGEMIHGYSSKLG---------LLFDIF---------------------V 142
K C+ L D SLG IHG ++G L D++ V
Sbjct: 188 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV 247
Query: 143 GNSLIAMYCVFGDMVA-ARKVFDEIPSLSA-VSWSLMIS--------------------- 179
S I CV ++++ A K F E+ ++A VS S+ S
Sbjct: 248 SWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHA 307
Query: 180 -----------------GYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGL 222
YAK ++ A++ FD + ++ + AMI+GY Q + L
Sbjct: 308 LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKAL 367
Query: 223 YLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMY 282
LF + + +G DE + ACA + L G+ ++ ++ L L + ++ + +DMY
Sbjct: 368 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMY 427
Query: 283 AKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFI 342
KC L A R+FD M RD V WNA+I+ +G G L LF M + I+PD+ TF
Sbjct: 428 GKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFG 487
Query: 343 AVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC-LVDLLSRTGFFEEAMVIIRRIT 401
++ AC+ G G+++ + V + + GC L+D+ S+ G EEA I R
Sbjct: 488 SILKACT-GGSLGYGMEIHSSI--VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 544
Query: 402 NSNNGS 407
N S
Sbjct: 545 QRANVS 550
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 130/259 (50%), Gaps = 4/259 (1%)
Query: 93 FTNMLR--NGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMY 150
FT+ L N +S N++ + K CA LG+ H + G FV N L+ +Y
Sbjct: 36 FTDFLNQVNSVSTTNFS--FVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVY 93
Query: 151 CVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMIS 210
D V+A VFD++P VSW+ MI+GY+K D+ A FF+ P +D W +M+S
Sbjct: 94 TNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLS 153
Query: 211 GYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPL 270
GY+QN + + +F M I D F IL C+ + G+ +H + R
Sbjct: 154 GYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDT 213
Query: 271 SIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEME 330
+ +++LLDMYAK + R+F +P+++ V W+A+I+G + ALK F EM+
Sbjct: 214 DVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ 273
Query: 331 KLGIKPDDITFIAVFTACS 349
K+ + +V +C+
Sbjct: 274 KVNAGVSQSIYASVLRSCA 292
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 174/386 (45%), Gaps = 62/386 (16%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
N +I + + + L +F ++ +GL D ++ +ACA ++ S G I+G + K
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
L D+ V N+ I MY + A +VFDE+ AVSW+ +I+ + + G
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG-------- 462
Query: 194 FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGAL 253
GY E L+LF M + I PDE F SIL AC G+L
Sbjct: 463 ----------------KGY-------ETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSL 498
Query: 254 DTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRL----------------FDS 297
G+ +H + ++ + + + SL+DMY+KCG ++ A+++ +
Sbjct: 499 GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEK 558
Query: 298 MPDRDI----VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGM 353
M ++ + V WN++ISG M A LF+ M ++GI PD T+ V C+
Sbjct: 559 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLAS 618
Query: 354 ASEGLKLLDKMFSVYNMEPKSEHYGC--LVDLLSRTGFFEEAMVIIRRITNSNNGSEETL 411
A G ++ + V E +S+ Y C LVD+ S+ G ++ R+ + + +
Sbjct: 619 AGLGKQIHAQ---VIKKELQSDVYICSTLVDMYSKCGDLHDS-----RLMFEKSLRRDFV 670
Query: 412 AWRAFLSACCNHGQAQLATLAAESLV 437
W A + +HG+ + A E ++
Sbjct: 671 TWNAMICGYAHHGKGEEAIQLFERMI 696
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 257/481 (53%), Gaps = 34/481 (7%)
Query: 49 HPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTI 108
+ G + A ++F + + N+++KA + G ++ +++F M R +
Sbjct: 150 YAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV------ 203
Query: 109 PYALKACAALRDHSLGEMIHGYSSKLGLLFD------IFVGNSLIAMYCVFGDMVAARKV 162
+ A+ D G +G + LFD I N++I Y + A ++
Sbjct: 204 -----SWTAMVD---GLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQL 255
Query: 163 FDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGL 222
F +P SW+ MI+G+ + +++ A FD PEK+ W MI+GYV+N +E L
Sbjct: 256 FQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEAL 315
Query: 223 YLF-RLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDM 281
+F ++++ + P+ +VSILSAC+ + L G +H+ ++++ + ++++LL+M
Sbjct: 316 NVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNM 375
Query: 282 YAKCGNLDLAKRLFDS--MPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDI 339
Y+K G L A+++FD+ + RD++ WN+MI+ A HG G A++++++M K G KP +
Sbjct: 376 YSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAV 435
Query: 340 TFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRR 399
T++ + ACS++G+ +G++ + ++ + EHY CLVDL R G ++
Sbjct: 436 TYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKD------- 488
Query: 400 ITNSNNGSEETLA---WRAFLSACCNHGQAQLATLAAESLVRL-DNPSGLYVLISNLYAA 455
+TN N + L+ + A LSAC H + +A + ++ + +G YVL+SN+YAA
Sbjct: 489 VTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAA 548
Query: 456 SGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQ 515
+G+ + +R MK K + K PGCS V++ F+ G+K+HPQ + + SIL + +
Sbjct: 549 NGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNK 608
Query: 516 L 516
+
Sbjct: 609 M 609
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 105/195 (53%), Gaps = 15/195 (7%)
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSL-SAVSWSLMISGYAKVGDVDLARLFFDET 197
D+ +I Y GDM AR++FD + S + V+W+ M+SGY + + +A + F E
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEM 135
Query: 198 PEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI--FVSILSACAHMGALDT 255
PE++ W MI GY Q+ + L LF M P+ +I + S++ A G +D
Sbjct: 136 PERNVVSWNTMIDGYAQSGRIDKALELFDEM------PERNIVSWNSMVKALVQRGRIDE 189
Query: 256 GVWVHRYLNRARLPLSIRLS-TSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLA 314
+ + R+P +S T+++D AK G +D A+RLFD MP+R+I+ WNAMI+G A
Sbjct: 190 AMNLFE-----RMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYA 244
Query: 315 MHGDGIGALKLFSEM 329
+ A +LF M
Sbjct: 245 QNNRIDEADQLFQVM 259
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 15/247 (6%)
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
++ ++++ Y + A +F E+P + VSW+ MI GYA+ G +D A FDE P
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP 167
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVW 258
E++ W +M+ VQ E + LF M D+ + +++ A G +D
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVS----WTAMVDGLAKNGKVDEA-- 221
Query: 259 VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGD 318
R L +I +++ YA+ +D A +LF MP+RD WN MI+G + +
Sbjct: 222 --RRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNRE 279
Query: 319 GIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYG 378
A LF M + + I++ + T + E L + KM +++P + G
Sbjct: 280 MNKACGLFDRMPEKNV----ISWTTMITGYVENKENEEALNVFSKMLRDGSVKP---NVG 332
Query: 379 CLVDLLS 385
V +LS
Sbjct: 333 TYVSILS 339
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 157/500 (31%), Positives = 234/500 (46%), Gaps = 47/500 (9%)
Query: 18 MKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRI-QHPTVCICNTI 76
+ +K+ H F G D++ + S ++ S+ S+ A KVF + + N +
Sbjct: 176 LSDVKKVHGLAFKLGFDSDCYVGSGLVT--SYSKFMSVEDAQKVFDELPDRDDSVLWNAL 233
Query: 77 IKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGL 136
+ + L VF+ M G+ +TI L A D G IHG + K G
Sbjct: 234 VNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGS 293
Query: 137 LFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDE 196
DI V N+LI MY + A +F+ + +W+ ++ + GD D
Sbjct: 294 GSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGT------ 347
Query: 197 TPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTG 256
L LF M + I PD ++L C + +L G
Sbjct: 348 -------------------------LALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQG 382
Query: 257 VWVHRY------LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMI 310
+H Y LNR I SL+DMY KCG+L A+ +FDSM +D WN MI
Sbjct: 383 REIHGYMIVSGLLNRKSSNEFIH--NSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMI 440
Query: 311 SGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNM 370
+G + G AL +FS M + G+KPD+ITF+ + ACS+SG +EG L +M +VYN+
Sbjct: 441 NGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNI 500
Query: 371 EPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLAT 430
P S+HY C++D+L R EEA + S + + WR+ LS+C HG LA
Sbjct: 501 LPTSDHYACVIDMLGRADKLEEAY----ELAISKPICDNPVVWRSILSSCRLHGNKDLAL 556
Query: 431 LAAESLVRLDNPS-GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVV 489
+A + L L+ G YVL+SN+Y +G++ +V VRD M+ + V K PGCS + + V
Sbjct: 557 VAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGV 616
Query: 490 MEFIAGEKTHPQMDEIHSIL 509
F G +THP+ IH L
Sbjct: 617 HTFFTGNQTHPEFKSIHDWL 636
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 176/401 (43%), Gaps = 49/401 (12%)
Query: 8 CLTLLEKCKNMKQL---KQAHAQVFTSGLDNNS----FALSRVLAFCSHPHQGSLTYACK 60
C+ L++C K +Q H + G ++S +L + A C G + A
Sbjct: 63 CIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKC-----GLMRRAVL 117
Query: 61 VFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRD 120
VF + V N +I F++NG+ + + M NG+ PD YT P LK A+
Sbjct: 118 VFGGSER-DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMEL 176
Query: 121 HSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL-SAVSWSLMIS 179
+ + +HG + KLG D +VG+ L+ Y F + A+KVFDE+P +V W+ +++
Sbjct: 177 SDV-KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 235
Query: 180 GYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
GY+++ F++ L +F M+ +G
Sbjct: 236 GYSQIFR-------------------------------FEDALLVFSKMREEGVGVSRHT 264
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
S+LSA G +D G +H + I +S +L+DMY K L+ A +F++M
Sbjct: 265 ITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD 324
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK 359
+RD+ WN+++ GD G L LF M GI+PD +T V C +G +
Sbjct: 325 ERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGRE 384
Query: 360 LLDKMFSVYNMEPKSEH---YGCLVDLLSRTGFFEEAMVII 397
+ M + KS + + L+D+ + G +A ++
Sbjct: 385 IHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVF 425
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 157/545 (28%), Positives = 275/545 (50%), Gaps = 49/545 (8%)
Query: 8 CLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH 67
CL+ +++ KQ+HA +G++ ++ + +L F + G + YA VF R+
Sbjct: 280 CLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNF--YCKVGLIEYAEMVFDRMFE 337
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
V N II ++ G + +++ M L D T+ + A A + LG+ +
Sbjct: 338 KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV 397
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG-D 186
Y + DI + ++++ MY G +V A+KVFD + W+ +++ YA+ G
Sbjct: 398 QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLS 457
Query: 187 VDLARLFF---------------------------DETPE-----KDKGI------WGAM 208
+ RLF+ DE + + GI W M
Sbjct: 458 GEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTM 517
Query: 209 ISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARL 268
++G VQN C +E + R MQ + + P+ LSACAH+ +L G +H Y+ R
Sbjct: 518 MNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQ 577
Query: 269 PLS-IRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFS 327
S + + TSL+DMYAKCG+++ A+++F S ++ NAMIS A++G+ A+ L+
Sbjct: 578 HSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYR 637
Query: 328 EMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRT 387
+E +G+KPD+IT V +AC+++G ++ +++ + S +M+P EHYG +VDLL+
Sbjct: 638 SLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASA 697
Query: 388 GFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLY 446
G E+A+ +I + + ++ +++C + +L + L+ + SG Y
Sbjct: 698 GETEKALRLIEEMPFKPDAR----MIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNY 753
Query: 447 VLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGV--VMEFIAGEKTHPQMDE 504
V ISN YA G +V ++R++MK K + K PGCS ++I G V F+A +KTH +++E
Sbjct: 754 VTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINE 813
Query: 505 IHSIL 509
I +L
Sbjct: 814 IQMML 818
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 203/460 (44%), Gaps = 41/460 (8%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
+ H V SGL++ F S + + G L A KVF I N ++ ++
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADM--YGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV 250
Query: 82 INGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIF 141
NG + +F++M + G+ P T+ L A A + G+ H + G+ D
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI 310
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
+G SL+ YC G + A VFD + V+W+L+IS
Sbjct: 311 LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIIS---------------------- 348
Query: 202 KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHR 261
GYVQ ++ +Y+ +LM+L + D +++SA A L G V
Sbjct: 349 ---------GYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQC 399
Query: 262 YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG 321
Y R I L+++++DMYAKCG++ AK++FDS ++D++ WN +++ A G
Sbjct: 400 YCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGE 459
Query: 322 ALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLV 381
AL+LF M+ G+ P+ IT+ + + +G E + +M S + P + ++
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS-SGIIPNLISWTTMM 518
Query: 382 DLLSRTGFFEEAMVIIRRITNSN---NGSEETLAWRAFLSACCNHGQAQLATLAAESLVR 438
+ + + G EEA++ +R++ S N T+A LSAC + + ++R
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVA----LSACAHLASLHIGRTIHGYIIR 574
Query: 439 LDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAP 478
S L + ++L + D+ + V +K + P
Sbjct: 575 NLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELP 614
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 162/355 (45%), Gaps = 42/355 (11%)
Query: 11 LLEKC---KNMKQLKQAHAQVFTSG--LDNNSFALSRVLAFCSHPHQGSLTYACKVFQRI 65
+L+ C +++ KQ HA++ +G N + ++++ F + +L A +F ++
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIF--YAKCDALEIAEVLFSKL 133
Query: 66 QHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGE 125
+ V II G L F ML N + PDN+ +P KAC AL+ G
Sbjct: 134 RVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGR 193
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
+HGY K GL +FV +SL MY G + A KVFDEIP +AV+W+ ++ G
Sbjct: 194 GVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVG----- 248
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILS 245
YVQN +E + LF M+ + P + LS
Sbjct: 249 --------------------------YVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLS 282
Query: 246 ACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVC 305
A A+MG ++ G H + L L TSLL+ Y K G ++ A+ +FD M ++D+V
Sbjct: 283 ASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVT 342
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL 360
WN +ISG G A+ + M +K D +T + +A + +E LKL
Sbjct: 343 WNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAA----RTENLKL 393
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 171/388 (44%), Gaps = 40/388 (10%)
Query: 83 NGNLNRTLHVFTNM-LRN-GLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDI 140
NG + L + T M RN + P+ Y L+ C RD S G+ IH K G D
Sbjct: 48 NGEIKEALSLVTEMDFRNLRIGPEIYG--EILQGCVYERDLSTGKQIHARILKNG---DF 102
Query: 141 FVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEK 200
+ N I V +F YAK +++A + F + +
Sbjct: 103 YARNEYIETKLV---------IF-----------------YAKCDALEIAEVLFSKLRVR 136
Query: 201 DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVH 260
+ W A+I + + L F M +I PD + ++ AC + G VH
Sbjct: 137 NVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVH 196
Query: 261 RYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGI 320
Y+ ++ L + +++SL DMY KCG LD A ++FD +PDR+ V WNA++ G +G
Sbjct: 197 GYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNE 256
Query: 321 GALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCL 380
A++LFS+M K G++P +T +A + G EG K + V ME + L
Sbjct: 257 EAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG-KQSHAIAIVNGMELDNILGTSL 315
Query: 381 VDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD 440
++ + G E A ++ R+ ++ + W +S G + A + L+RL+
Sbjct: 316 LNFYCKVGLIEYAEMVFDRMF-----EKDVVTWNLIISGYVQQGLVEDAIYMCQ-LMRLE 369
Query: 441 NPSGLYVLISNLYAASGRHADVRRVRDV 468
V ++ L +A+ R +++ ++V
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKEV 397
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 95/231 (41%), Gaps = 24/231 (10%)
Query: 209 ISGYVQNNCFKEGLYLFRLMQLTD--IGPDESIFVSILSACAHMGALDTGVWVHRYL--N 264
+S +N KE L L M + IGP+ I+ IL C + L TG +H + N
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPE--IYGEILQGCVYERDLSTGKQIHARILKN 99
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALK 324
+ + T L+ YAKC L++A+ LF + R++ W A+I G GAL
Sbjct: 100 GDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALM 159
Query: 325 LFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC----- 379
F EM + I PD+ V AC LK V+ KS C
Sbjct: 160 GFVEMLENEIFPDNFVVPNVCKACG-------ALKWSRFGRGVHGYVVKSGLEDCVFVAS 212
Query: 380 -LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
L D+ + G ++A + I + N +AW A + +G+ + A
Sbjct: 213 SLADMYGKCGVLDDASKVFDEIPDRN-----AVAWNALMVGYVQNGKNEEA 258
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/470 (30%), Positives = 222/470 (47%), Gaps = 41/470 (8%)
Query: 49 HPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNL-----NRTLHVFTNMLRNGLSP 103
+ GSL A K+F + V N +I FL + + +F +M R GL P
Sbjct: 297 YAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEP 356
Query: 104 DNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVF 163
T LKAC+A + G IH K D F+G++LI +Y + G + F
Sbjct: 357 SPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCF 416
Query: 164 DEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLY 223
T ++D W +MI +VQN +
Sbjct: 417 AS-------------------------------TSKQDIASWTSMIDCHVQNEQLESAFD 445
Query: 224 LFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYA 283
LFR + + I P+E ++SACA AL +G + Y ++ + + TS + MYA
Sbjct: 446 LFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYA 505
Query: 284 KCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIA 343
K GN+ LA ++F + + D+ ++AMIS LA HG AL +F M+ GIKP+ F+
Sbjct: 506 KSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLG 565
Query: 344 VFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNS 403
V AC + G+ ++GLK M + Y + P +H+ CLVDLL RTG +A +I S
Sbjct: 566 VLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLIL----S 621
Query: 404 NNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADV 462
+ + + WRA LS+C + + + AE L+ L+ SG YVL+ N+Y SG ++
Sbjct: 622 SGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSA 681
Query: 463 RRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
VR++M+++ V K P S + I F + +HP I+++LE M
Sbjct: 682 EEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 155/349 (44%), Gaps = 42/349 (12%)
Query: 55 LTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKA 114
L +A ++F R+ + N++I + G + + +F L D +T AL
Sbjct: 98 LGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGF 157
Query: 115 CAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSW 174
C D LGE++HG GL +F+ N LI MY
Sbjct: 158 CGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMY------------------------ 193
Query: 175 SLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG 234
+K G +D A FD E+D+ W ++ISGYV+ +E L L M +
Sbjct: 194 -------SKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLN 246
Query: 235 PDESIFVSILSACA---HMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
S+L AC + G ++ G+ +H Y + + I + T+LLDMYAK G+L A
Sbjct: 247 LTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEA 306
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIG------ALKLFSEMEKLGIKPDDITFIAVF 345
+LF MP +++V +NAMISG + D I A KLF +M++ G++P TF V
Sbjct: 307 IKLFSLMPSKNVVTYNAMISGF-LQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVL 365
Query: 346 TACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
ACS + G + + + N + L++L + G E+ M
Sbjct: 366 KACSAAKTLEYG-RQIHALICKNNFQSDEFIGSALIELYALMGSTEDGM 413
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 10/230 (4%)
Query: 181 YAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIF 240
Y K ++ AR FD PE++ + ++ISGY Q +++ + LF + ++ D+ +
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 241 VSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD 300
L C LD G +H + L + L L+DMY+KCG LD A LFD +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 301 RDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL 360
RD V WN++ISG G L L ++M + G+ +V AC + +EG
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCIN--LNEG--F 267
Query: 361 LDKMFSVY------NMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSN 404
++K +++ ME L+D+ ++ G +EA+ + + + N
Sbjct: 268 IEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKN 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 6/205 (2%)
Query: 223 YLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMY 282
+L L Q + D + + A G++ G H ++ ++ L + L +LL+MY
Sbjct: 33 FLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMY 92
Query: 283 AKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFI 342
KC L A++LFD MP+R+I+ +N++ISG G A++LF E + +K D T+
Sbjct: 93 CKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYA 152
Query: 343 AVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITN 402
C G +LL + V + + L+D+ S+ G ++AM + R
Sbjct: 153 GALGFCGERCDLDLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 403 SNNGSEETLAWRAFLSACCNHGQAQ 427
+ ++W + +S G A+
Sbjct: 212 -----RDQVSWNSLISGYVRVGAAE 231
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 257/532 (48%), Gaps = 54/532 (10%)
Query: 27 QVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ----HPTVCICNTIIKAFLI 82
+VF S D N + + +L+ S+ G + A + ++ P + N+++ +
Sbjct: 145 KVFNSMKDRNLSSWNSILS--SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYAS 202
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFV 142
G + V M GL P +I L+A A LG+ IHGY + L +D++V
Sbjct: 203 KGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYV 262
Query: 143 GNSLIAMYCVFGDMVAARKVFDEIPSLSAVSW-----------------SLMI------- 178
+LI MY G + AR VFD + + + V+W +LMI
Sbjct: 263 ETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGI 322
Query: 179 -----------SGYAKVGDVDLARLFFDETPEKDKGI------WGAMISGYVQNNCFKEG 221
SGYA +G + A + K+KG+ W A+ SG +N F+
Sbjct: 323 KPDAITWNSLASGYATLGKPEKALDVIGKM--KEKGVAPNVVSWTAIFSGCSKNGNFRNA 380
Query: 222 LYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDM 281
L +F MQ +GP+ + ++L + L +G VH + R L ++T+L+DM
Sbjct: 381 LKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDM 440
Query: 282 YAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITF 341
Y K G+L A +F + ++ + WN M+ G AM G G + FS M + G++PD ITF
Sbjct: 441 YGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITF 500
Query: 342 IAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRIT 401
+V + C SG+ EG K D M S Y + P EH C+VDLL R+G+ +EA I+ ++
Sbjct: 501 TSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS 560
Query: 402 NSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHA 460
+ + W AFLS+C H +LA +A + L L+ + S Y+++ NLY+ R
Sbjct: 561 LKPDAT----IWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWE 616
Query: 461 DVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
DV R+R++M+N RV S ++ID V F A KTHP +I+ L K+
Sbjct: 617 DVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKL 668
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 190/387 (49%), Gaps = 8/387 (2%)
Query: 25 HAQVFTSGLDN-NSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLIN 83
H + GLDN ++ +S + F + SL +A K+F + N I+ L +
Sbjct: 10 HGGLIKRGLDNSDTRVVSASMGF--YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRS 67
Query: 84 GNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVG 143
GN + + +F M +G + T+ L+ C+ + G IHGY +LGL ++ +
Sbjct: 68 GNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMC 127
Query: 144 NSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP----E 199
NSLI MY G + +RKVF+ + + SW+ ++S Y K+G VD A DE +
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 200 KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWV 259
D W +++SGY K+ + + + MQ+ + P S S+L A A G L G +
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 260 HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDG 319
H Y+ R +L + + T+L+DMY K G L A+ +FD M ++IV WN+++SGL+
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307
Query: 320 IGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC 379
A L MEK GIKPD IT+ ++ + + G + L ++ KM + P +
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM-KEKGVAPNVVSWTA 366
Query: 380 LVDLLSRTGFFEEAMVIIRRITNSNNG 406
+ S+ G F A+ + ++ G
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVG 393
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 148/478 (30%), Positives = 242/478 (50%), Gaps = 41/478 (8%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSR-VLAFCSHPHQGSLTYACKVFQRIQH 67
+LL N K L+ HA + + L +N S+ VLA+ H + VF + +
Sbjct: 38 FSLLHHSPNAKHLRHLHAHLLRTFLYSNVVLSSKLVLAYSKLNHL--FPTSLSVFWHMPY 95
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNG-LSPDNYTIPYALKACAALRDHSLGEM 126
+ N II F +G ++++ +F M R + PD++T+P L+AC+A R+ G++
Sbjct: 96 RNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDL 155
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
IH KLG +FV ++L+ MY G ++ ARK+FD++P +V ++ M GY + G+
Sbjct: 156 IHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE 215
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
L GL +FR M + D + VS+L A
Sbjct: 216 AML-------------------------------GLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
C +GAL G VH + R L + L ++ DMY KC LD A +F +M RD++ W
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 304
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
+++I G + GD + + KLF EM K GI+P+ +TF+ V +AC++ G+ + L ++
Sbjct: 305 SSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSW-LYFRLMQ 363
Query: 367 VYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
YN+ P+ +HY + D +SR G EEA + + + E + A LS C +G
Sbjct: 364 EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPD--EAVMG--AVLSGCKVYGNV 419
Query: 427 QLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSV 483
++ A L++L + YV ++ LY+A+GR + +R MK K++ K PGCSS+
Sbjct: 420 EVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 160/571 (28%), Positives = 257/571 (45%), Gaps = 102/571 (17%)
Query: 11 LLEKCKNMKQLKQAHAQVFTSGLDN-NSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPT 69
L++C ++Q KQ HAQ+ + ++ + + L F + +TY ++ +
Sbjct: 9 FLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHD 68
Query: 70 VCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH- 128
+++ + T+ V+ +M +G+ P ++ + L+AC + + G+ IH
Sbjct: 69 SFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHA 128
Query: 129 ------------------GYSSKLGLL------FD------IFVGNSLIAMYCVFGDMVA 158
G S+LG + FD NSL+ Y G++
Sbjct: 129 QALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDE 188
Query: 159 ARKVFDEIPSLSAVSWSLMISGYAKVGDV------------------------------- 187
AR+VFD+IP AVSW+L+IS YAK GD+
Sbjct: 189 ARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREM 248
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD--------------- 232
LAR +FD P+K+ W MISGY + + LFRLM D
Sbjct: 249 KLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNG 308
Query: 233 ------------------IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRL 274
I PDE S++SA + +G G WV Y+ + + L
Sbjct: 309 KPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLL 368
Query: 275 STSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGI 334
STSL+D+Y K G+ A ++F ++ +D V ++AMI G ++G A LF+ M + I
Sbjct: 369 STSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKI 428
Query: 335 KPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
P+ +TF + +A S+SG+ EG K + M +N+EP ++HYG +VD+L R G EEA
Sbjct: 429 PPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEEAY 487
Query: 395 VIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLY 453
+I+ + N W A L A H + +A V+L+ +P+G ++ +Y
Sbjct: 488 ELIKSMPMQPNAG----VWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIY 543
Query: 454 AASGRHADVRRVRDVMKNKRVDKAPGCSSVE 484
++ GR D R VRD +K K++ K GCS VE
Sbjct: 544 SSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/433 (32%), Positives = 225/433 (51%), Gaps = 43/433 (9%)
Query: 55 LTYACKVFQRI-QHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALK 113
L+ A K+F RI + NT++K + + + +F + G+ D+ + +
Sbjct: 382 LSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVIS 441
Query: 114 ACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVS 173
+C+ + LG+ +H Y K L I V NSLI +Y GD+ V+
Sbjct: 442 SCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLT--------------VA 487
Query: 174 WSLMISGYAKVGDVDLARLFFDETPEKDKGI--WGAMISGYVQNNCFKEGLYLFRLMQLT 231
W R+F E D + W AMI+ YV ++ + LF M
Sbjct: 488 W----------------RMF----CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSE 527
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
+ P V++L AC + G+L+ G +HRY+ +++ LS +L+DMYAKCG+L+ +
Sbjct: 528 NFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKS 587
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYS 351
+ LFD+ +D VCWN MISG MHGD A+ LF +ME+ +KP TF+A+ +AC+++
Sbjct: 588 RELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHA 647
Query: 352 GMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETL 411
G+ +G KL KM Y+++P +HY CLVDLLSR+G EEA + + S +G +
Sbjct: 648 GLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDG----V 702
Query: 412 AWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMK 470
W LS+C HG+ ++ AE V D G Y++++N+Y+A+G+ + R R++M+
Sbjct: 703 IWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMR 762
Query: 471 NKRVDKAPGCSSV 483
V K G S V
Sbjct: 763 ESGVGKRAGHSVV 775
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 195/451 (43%), Gaps = 46/451 (10%)
Query: 12 LEKCKNMKQLKQA---HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
+ C N+ LK+ H +GL ++ F S + +F S S Y F+ +
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLS--FRELGDE 294
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
+ +II + +G++ + +F M G+ PD I + + G+ H
Sbjct: 295 DMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFH 354
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVD 188
G+ + D V NSL++MYC F + A K+F I
Sbjct: 355 GFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRI---------------------- 392
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
+ E +K W M+ GY + C + + LFR +Q I D + S++S+C+
Sbjct: 393 --------SEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCS 444
Query: 249 HMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNA 308
H+GA+ G +H Y+ + L L+I + SL+D+Y K G+L +A R+F D +++ WNA
Sbjct: 445 HIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNA 503
Query: 309 MISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVY 368
MI+ A+ LF M KP IT + + AC +G G +++ + +
Sbjct: 504 MIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERG-QMIHRYITET 562
Query: 369 NMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQL 428
E L+D+ ++ G E++ R + ++ N ++ + W +S HG +
Sbjct: 563 EHEMNLSLSAALIDMYAKCGHLEKS----RELFDAGN-QKDAVCWNVMISGYGMHGDVES 617
Query: 429 ATL----AAESLVRLDNPSGLYVLISNLYAA 455
A ES V+ P+ L +L + +A
Sbjct: 618 AIALFDQMEESDVKPTGPTFLALLSACTHAG 648
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 161/337 (47%), Gaps = 39/337 (11%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
+ L ++ +++ L++ +A + T GL N F S++++ S+ G + +VF +
Sbjct: 31 VILCDQSLSLESLRKHNALIITGGLSENIFVASKLIS--SYASYGKPNLSSRVFHLVTRR 88
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
+ + N+IIKA NG+ R+L F +ML +G SPD++T P + ACA L +G +H
Sbjct: 89 DIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVH 148
Query: 129 GYSSKLGLLFD--IFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
G K G FD VG S + Y G + A VFDE+P V+W+
Sbjct: 149 GLVLKHG-GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWT----------- 196
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGL-YLFRLMQL-TDIG-PDESIFVSI 243
A+ISG+VQN + GL YL ++ +D+ P+
Sbjct: 197 --------------------AIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECG 236
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI 303
AC+++GAL G +H + + L S + +S+ Y+K GN A F + D D+
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDM 296
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDIT 340
W ++I+ LA GD + +F EM+ G+ PD +
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVV 333
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 114/258 (44%), Gaps = 12/258 (4%)
Query: 175 SLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG 234
S +IS YA G +L+ F +D +W ++I + N + L F M L+
Sbjct: 63 SKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQS 122
Query: 235 PDESIFVSILSACAHMGALDTGVWVHR-YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKR 293
PD ++SACA + G +VH L + + S + Y+KCG L A
Sbjct: 123 PDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACL 182
Query: 294 LFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGI---KPDDITFIAVFTACSY 350
+FD MPDRD+V W A+ISG +G+ G L +M G KP+ T F ACS
Sbjct: 183 VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSN 242
Query: 351 SGMASEGLKLLDKMFSVYNMEPKSEHY-GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEE 409
G EG L F+V N S+ + S++G EA + R + G E+
Sbjct: 243 LGALKEGRCL--HGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFREL-----GDED 295
Query: 410 TLAWRAFLSACCNHGQAQ 427
+W + +++ G +
Sbjct: 296 MFSWTSIIASLARSGDME 313
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 132/298 (44%), Gaps = 35/298 (11%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
K H V + LD ++ ++ + G LT A ++F V N +I +++
Sbjct: 453 KSLHCYVVKTSLDLTISVVNSLIDL--YGKMGDLTVAWRMFCEAD-TNVITWNAMIASYV 509
Query: 82 INGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIF 141
+ + +F M+ P + T+ L AC G+MIH Y ++ ++
Sbjct: 510 HCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLS 569
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
+ +LI MY G + +R++FD AV W++MISGY GDV+ A FD+
Sbjct: 570 LSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQ----- 624
Query: 202 KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHR 261
M+ +D+ P F+++LSAC H G ++ G +
Sbjct: 625 --------------------------MEESDVKPTGPTFLALLSACTHAGLVEQGKKLFL 658
Query: 262 YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP-DRDIVCWNAMISGLAMHGD 318
+++ + +++ + L+D+ ++ GNL+ A+ SMP D V W ++S HG+
Sbjct: 659 KMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGE 716
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 153/403 (37%), Gaps = 73/403 (18%)
Query: 32 GLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLH 91
G D N+ + + F S G L AC VF + V II + NG L
Sbjct: 156 GFDRNTAVGASFVYFYSKC--GFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 92 VFTNMLRNGL---SPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIA 148
M G P+ T+ +AC+ L G +HG++ K GL FV +S+ +
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFS 273
Query: 149 MYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAM 208
Y G+ A F E+ SW+ +I+ A+ GD++
Sbjct: 274 FYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDME-------------------- 313
Query: 209 ISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARL 268
E +F MQ + PD + +++ M + G H ++ R
Sbjct: 314 -----------ESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCF 362
Query: 269 PLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR-DIVCWNAMISGLAMHGDGIGALKLFS 327
L + SLL MY K L +A++LF + + + WN M+ G + ++LF
Sbjct: 363 SLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFR 422
Query: 328 EMEKLGIKPDDITFIAVFTACSYSGMASEGLKL--------LDKMFSVYNMEPKSEHYGC 379
+++ LGI+ D + +V ++CS+ G G L LD SV N
Sbjct: 423 KIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVN---------S 473
Query: 380 LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCN 422
L+DL + G + T+AWR F A N
Sbjct: 474 LIDLYGKMG-------------------DLTVAWRMFCEADTN 497
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 268 LPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFS 327
L +I +++ L+ YA G +L+ R+F + RDI WN++I +GD +L F
Sbjct: 55 LSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFF 114
Query: 328 EMEKLGIKPDDITFIAVFTACS-----YSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVD 382
M G PD T V +AC+ + G GL L F S V
Sbjct: 115 SMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS-----FVY 169
Query: 383 LLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
S+ GF ++A ++ + + + +AW A +S +G+++
Sbjct: 170 FYSKCGFLQDACLVFDEMPD-----RDVVAWTAIISGHVQNGESE 209
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 227/463 (49%), Gaps = 38/463 (8%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
KQ H SGL + S + F + GSL + K+FQ I ++I F
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSL--FTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFN 527
Query: 82 INGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIF 141
G L + +F+ ML +G SPD T+ L C++ G+ IHGY+ + G+ +
Sbjct: 528 EYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMD 587
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
+G++L+ MY G + AR+V+D +P L VS S +ISGY+
Sbjct: 588 LGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYS------------------- 628
Query: 202 KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHR 261
Q+ ++G LFR M ++ D SIL A A G VH
Sbjct: 629 ------------QHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHA 676
Query: 262 YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG 321
Y+ + L + +SLL MY+K G++D + F + D++ W A+I+ A HG
Sbjct: 677 YITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANE 736
Query: 322 ALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLV 381
AL++++ M++ G KPD +TF+ V +ACS+ G+ E L+ M Y +EP++ HY C+V
Sbjct: 737 ALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMV 796
Query: 382 DLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD- 440
D L R+G EA I N+ + + L W L+AC HG+ +L +AA+ + L+
Sbjct: 797 DALGRSGRLREAESFI----NNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEP 852
Query: 441 NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSV 483
+ +G Y+ +SN+ A G +V R +MK V K PG SSV
Sbjct: 853 SDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 137/309 (44%), Gaps = 32/309 (10%)
Query: 49 HPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTI 108
+ + GS+ A K+F I P V CN +I + + +L F+ M G + +
Sbjct: 94 YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISY 153
Query: 109 PYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPS 168
+ AC+AL+ E++ ++ K+G F V ++LI ++ A KVF + S
Sbjct: 154 GSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRD--S 211
Query: 169 LSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLM 228
LSA + W +I+G ++N + LF M
Sbjct: 212 LSANVY-----------------------------CWNTIIAGALRNQNYGAVFDLFHEM 242
Query: 229 QLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNL 288
+ PD + S+L+ACA + L G V + + + + T+++D+YAKCG++
Sbjct: 243 CVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHM 301
Query: 289 DLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTAC 348
A +F +P+ +V W M+SG D AL++F EM G++ ++ T +V +AC
Sbjct: 302 AEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Query: 349 SYSGMASEG 357
M E
Sbjct: 362 GRPSMVCEA 370
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 162/372 (43%), Gaps = 50/372 (13%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
A KVF+ V NTII L N N +F M PD+YT L ACA+
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 118 LRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLM 177
L G+++ K G D+FV +++ +Y G M A +VF IP+ S VS
Sbjct: 264 LEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS---- 318
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDE 237
W M+SGY ++N L +F+ M+ + + +
Sbjct: 319 ---------------------------WTVMLSGYTKSNDAFSALEIFKEMRHSGVEINN 351
Query: 238 SIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDS 297
S++SAC + VH ++ ++ L ++ +L+ MY+K G++DL++++F+
Sbjct: 352 CTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFED 411
Query: 298 MPD---RDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTA--CSYSG 352
+ D ++IV N MI+ + A++LF+ M + G++ D+ + ++ + C G
Sbjct: 412 LDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG 469
Query: 353 MASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLA 412
G L + V ++ S L L S+ G EE+ + + I +N
Sbjct: 470 KQVHGYTLKSGL--VLDLTVGSS----LFTLYSKCGSLEESYKLFQGIPFKDNA-----C 518
Query: 413 WRAFLSACCNHG 424
W + +S +G
Sbjct: 519 WASMISGFNEYG 530
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 142/315 (45%), Gaps = 41/315 (13%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNN---SFALSRVLAFCSHPHQGSLTYACKVFQRI 65
LT+ ++ + K+ H +G+D AL + + C GSL A +V+ R+
Sbjct: 558 LTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKC-----GSLKLARQVYDRL 612
Query: 66 QHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGE 125
C+++I + +G + +F +M+ +G + D++ I LKA A + SLG
Sbjct: 613 PELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGA 672
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
+H Y +K+GL + VG+SL+ MY FG + K F +I ++W+ +I+ YA+ G
Sbjct: 673 QVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHG 732
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILS 245
+ E L ++ LM+ PD+ FV +LS
Sbjct: 733 KAN-------------------------------EALQVYNLMKEKGFKPDKVTFVGVLS 761
Query: 246 ACAHMGALDTGVW-VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR-DI 303
AC+H G ++ + ++ + + R ++D + G L A+ ++M + D
Sbjct: 762 ACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDA 821
Query: 304 VCWNAMISGLAMHGD 318
+ W +++ +HG+
Sbjct: 822 LVWGTLLAACKIHGE 836
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 21/261 (8%)
Query: 163 FDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGL 222
FD + S +SW Y+ G + A FD P+ D MISGY Q+ F+E L
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 223 YLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMY 282
F M +E + S++SAC+ + A V + + + ++L+D++
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 283 AKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGAL-KLFSEMEKLGIKPDDITF 341
+K + A ++F ++ CWN +I+G A+ GA+ LF EM KPD T+
Sbjct: 196 SKNLRFEDAYKVFRDSLSANVYCWNTIIAG-ALRNQNYGAVFDLFHEMCVGFQKPDSYTY 254
Query: 342 IAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEH-YGC--LVDLLSRTGFFEEAMVIIR 398
+V AC+ + E L+ K+ ++ +E + C +VDL ++ G EAM +
Sbjct: 255 SSVLAACA----SLEKLR-FGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 399 RITNSNNGSEETLAWRAFLSA 419
RI N + ++W LS
Sbjct: 310 RIPNPS-----VVSWTVMLSG 325
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 263 LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGA 322
L R LP + L+ SLL Y+ G++ A +LFD++P D+V N MISG H +
Sbjct: 75 LRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEES 134
Query: 323 LKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHY----G 378
L+ FS+M LG + ++I++ +V +ACS + L ++ + ++ Y
Sbjct: 135 LRFFSKMHFLGFEANEISYGSVISACS-----ALQAPLFSELVCCHTIKMGYFFYEVVES 189
Query: 379 CLVDLLSRTGFFEEAMVIIRRITNSN 404
L+D+ S+ FE+A + R ++N
Sbjct: 190 ALIDVFSKNLRFEDAYKVFRDSLSAN 215
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 158/502 (31%), Positives = 251/502 (50%), Gaps = 53/502 (10%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQ-----GSLTYACKVFQRIQHPTVCICNTI 76
+ HA V T+G FA+ ++ C+ Q GS A K+F R++ + T+
Sbjct: 317 RDIHAYVITTG-----FAVD--ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 77 IKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGL 136
I + N ++ + + M ++ + PD T+ L ACA L D G +H + K L
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 137 LFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDE 196
+ + V N+LI MY +K +D A F
Sbjct: 430 ISYVIVANNLINMY-------------------------------SKCKCIDKALDIFHN 458
Query: 197 TPEKDKGIWGAMISGYVQNN-CFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDT 255
P K+ W ++I+G NN CF E L R M++T + P+ + L+ACA +GAL
Sbjct: 459 IPRKNVISWTSIIAGLRLNNRCF-EALIFLRQMKMT-LQPNAITLTAALAACARIGALMC 516
Query: 256 GVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAM 315
G +H ++ R + L L +LLDMY +CG ++ A F+S +D+ WN +++G +
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSE 575
Query: 316 HGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSE 375
G G ++LF M K ++PD+ITFI++ CS S M +GL KM Y + P +
Sbjct: 576 RGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLK 634
Query: 376 HYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAES 435
HY C+VDLL R G +EA I+++ + + + W A L+AC H + L L+A+
Sbjct: 635 HYACVVDLLGRAGELQEAHKFIQKMPVTPDPA----VWGALLNACRIHHKIDLGELSAQH 690
Query: 436 LVRLDNPS-GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIA 494
+ LD S G Y+L+ NLYA G+ +V +VR +MK + GCS VE+ G V F++
Sbjct: 691 IFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLS 750
Query: 495 GEKTHPQMDEIHSILEKMHLQL 516
+K HPQ EI+++LE + ++
Sbjct: 751 DDKYHPQTKEINTVLEGFYEKM 772
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 142/309 (45%), Gaps = 32/309 (10%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLR-NGLSPDNYTIPYA 111
G+L A VF ++ + N ++ + G + + ++ ML G+ PD YT P
Sbjct: 143 GNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCV 202
Query: 112 LKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSA 171
L+ C + D + G+ +H + + G DI V N+LI MY
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY--------------------- 241
Query: 172 VSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
K GDV ARL FD P +D W AMISGY +N EGL LF M+
Sbjct: 242 ----------VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGL 291
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
+ PD S++SAC +G G +H Y+ + I + SL MY G+ A
Sbjct: 292 SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREA 351
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYS 351
++LF M +DIV W MISG + A+ + M++ +KPD+IT AV +AC+
Sbjct: 352 EKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATL 411
Query: 352 GMASEGLKL 360
G G++L
Sbjct: 412 GDLDTGVEL 420
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 153/330 (46%), Gaps = 37/330 (11%)
Query: 11 LLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH 67
+L C + L K+ H V G + + ++ ++ + G + A +F R+
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITM--YVKCGDVKSARLLFDRMPR 259
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
+ N +I + NG + L +F M + PD T+ + AC L D LG I
Sbjct: 260 RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDI 319
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
H Y G DI V NSL MY G A K+F + VSW+ MISGY
Sbjct: 320 HAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE----- 374
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
++ P+K + +R+M + PDE ++LSAC
Sbjct: 375 ------YNFLPDK--------------------AIDTYRMMDQDSVKPDEITVAAVLSAC 408
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWN 307
A +G LDTGV +H+ +ARL + ++ +L++MY+KC +D A +F ++P ++++ W
Sbjct: 409 ATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWT 468
Query: 308 AMISGLAMHGDGIGALKLFSEMEKLGIKPD 337
++I+GL ++ AL +M K+ ++P+
Sbjct: 469 SIIAGLRLNNRCFEALIFLRQM-KMTLQPN 497
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 30/270 (11%)
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFV 142
NG L + + +M ++ D ++ C R G ++ + + +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 143 GNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDK 202
GN+ +AM+ FG++V A VF ++ + SW++++ GYAK G +FDE
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQG-------YFDE------ 178
Query: 203 GIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRY 262
AM LY R++ + + PD F +L C + L G VH +
Sbjct: 179 ----AMC------------LY-HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVH 221
Query: 263 LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGA 322
+ R L I + +L+ MY KCG++ A+ LFD MP RDI+ WNAMISG +G
Sbjct: 222 VVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEG 281
Query: 323 LKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
L+LF M L + PD +T +V +AC G
Sbjct: 282 LELFFAMRGLSVDPDLMTLTSVISACELLG 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 209 ISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARL 268
+ G N +E + L MQ + DE +FV+++ C A + G V+ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 269 PLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSE 328
L + L + L M+ + GNL A +F M +R++ WN ++ G A G A+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 329 MEKL-GIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRT 387
M + G+KPD TF V C + G K + Y E + L+ + +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARG-KEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 388 GFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
G + A ++ R+ + ++W A +S +G
Sbjct: 245 GDVKSARLLFDRMPR-----RDIISWNAMISGYFENG 276
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/506 (29%), Positives = 247/506 (48%), Gaps = 39/506 (7%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
L + K +N++ KQ H + + + F S ++ ++ ++ A +F +
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALID--AYFKCRGVSMAQNIFSQCNSV 404
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
V + +I +L NG +L +F +++ +SP+ T+ L L LG +H
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVD 188
G+ K G +G ++I MY AK G ++
Sbjct: 465 GFIIKKGFDNRCNIGCAVIDMY-------------------------------AKCGRMN 493
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
LA F+ ++D W +MI+ Q++ + +FR M ++ I D + LSACA
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 249 HMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNA 308
++ + G +H ++ + L + ++L+DMYAKCGNL A +F +M +++IV WN+
Sbjct: 554 NLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNS 613
Query: 309 MISGLAMHGDGIGALKLFSEM-EKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSV 367
+I+ HG +L LF EM EK GI+PD ITF+ + ++C + G EG++ M
Sbjct: 614 IIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTED 673
Query: 368 YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
Y ++P+ EHY C+VDL R G EA ++ + + W L AC H +
Sbjct: 674 YGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAG----VWGTLLGACRLHKNVE 729
Query: 428 LATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEID 486
LA +A+ L+ LD + SG YVLISN +A + V +VR +MK + V K PG S +EI+
Sbjct: 730 LAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEIN 789
Query: 487 GVVMEFIAGEKTHPQMDEIHSILEKM 512
F++G+ HP+ I+S+L +
Sbjct: 790 KRTHLFVSGDVNHPESSHIYSLLNSL 815
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 170/349 (48%), Gaps = 38/349 (10%)
Query: 6 KRCLTLLEKCKN---MKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVF 62
+R LL+ C N ++Q KQ HA + + + +S+ R+L + GS + K+F
Sbjct: 36 RRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGM--YAMCGSFSDCGKMF 93
Query: 63 QRI--QHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRD 120
R+ + ++ N+II +F+ NG LN+ L + ML G+SPD T P +KAC AL++
Sbjct: 94 YRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKN 153
Query: 121 HSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISG 180
+ + S LG+ + FV +SLI Y +G + K+FD + V W++M++G
Sbjct: 154 FKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNG 213
Query: 181 YAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIF 240
YAK G +D ++I G F +M++ I P+ F
Sbjct: 214 YAKCGALD------------------SVIKG-------------FSVMRMDQISPNAVTF 242
Query: 241 VSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD 300
+LS CA +D GV +H + + + + SLL MY+KCG D A +LF M
Sbjct: 243 DCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR 302
Query: 301 RDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
D V WN MISG G +L F EM G+ PD ITF ++ + S
Sbjct: 303 ADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 181/406 (44%), Gaps = 41/406 (10%)
Query: 23 QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLI 82
Q H V SG+D + +L+ + G A K+F+ + N +I ++
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSM--YSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFV 142
+G + +L F M+ +G+ PD T L + + + + IH Y + + DIF+
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 143 GNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDK 202
++LI Y K V +A+ F + D
Sbjct: 378 TSALI-------------------------------DAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 203 GIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRY 262
++ AMISGY+ N + + L +FR + I P+E VSIL + AL G +H +
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 263 LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGA 322
+ + + +++DMYAKCG ++LA +F+ + RDIV WN+MI+ A + A
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 323 LKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGL-KLLDKMFSVYNMEPKSEHYGCLV 381
+ +F +M GI D ++ A +AC + + SE K + +++ L+
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSAC--ANLPSESFGKAIHGFMIKHSLASDVYSESTLI 584
Query: 382 DLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
D+ ++ G + AM + + + N ++W + ++AC NHG+ +
Sbjct: 585 DMYAKCGNLKAAMNVFKTMKEKN-----IVSWNSIIAACGNHGKLK 625
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 104/220 (47%), Gaps = 6/220 (2%)
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLN 264
W ++IS +V+N + L + M + PD S F ++ AC + ++ ++
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALK 324
+ + +++SL+ Y + G +D+ +LFD + +D V WN M++G A G +K
Sbjct: 166 SLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIK 225
Query: 325 LFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLL 384
FS M I P+ +TF V + C+ + G++ L + V ++ + L+ +
Sbjct: 226 GFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQ-LHGLVVVSGVDFEGSIKNSLLSMY 284
Query: 385 SRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
S+ G F++A + R ++ + +T+ W +S G
Sbjct: 285 SKCGRFDDASKLFRMMSRA-----DTVTWNCMISGYVQSG 319
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/519 (28%), Positives = 254/519 (48%), Gaps = 48/519 (9%)
Query: 1 MSSCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACK 60
+S+C+K + L +C H V G N+ +L L C + + A
Sbjct: 170 VSACTKLSNSRLGRC--------VHGFVIRRGFSND-LSLVNSLLNC-YAKSRAFKEAVN 219
Query: 61 VFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRD 120
+F+ I V +T+I ++ NG L VF +M+ +G P+ T+ L+ACAA D
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 121 HSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISG 180
G H + + GL ++ V +L+ MY A VF IP VS
Sbjct: 280 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVS------- 332
Query: 181 YAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQL-TDIGPDESI 239
W A+ISG+ N + F +M L + PD +
Sbjct: 333 ------------------------WVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 368
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
V +L +C+ +G L+ H Y+ + + + SL+++Y++CG+L A ++F+ +
Sbjct: 369 MVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLG-IKPDDITFIAVFTACSYSGMASEGL 358
+D V W ++I+G +HG G AL+ F+ M K +KP+++TF+++ +ACS++G+ EGL
Sbjct: 429 LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 488
Query: 359 KLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLS 418
++ M + Y + P EHY LVDLL R G + A+ I +R+ S + + L L
Sbjct: 489 RIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSP--TPQILG--TLLG 544
Query: 419 ACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKA 477
AC H ++A A+ L L+ N +G Y+L+SN+Y G +V ++R+ +K + + K
Sbjct: 545 ACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKG 604
Query: 478 PGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
S +EI V F+A ++ HP+ + ++ +L+++ L +
Sbjct: 605 LAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHM 643
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 201/454 (44%), Gaps = 79/454 (17%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
A ++F + ++ NT++K+ L+ F++M R+ PDN+T+P ALKAC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 118 LRDHSLGEMIHGYSSK-LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSL 176
LR+ + GEMIHG+ K + L D++VG+SLI MY G M+ A ++FDE+ V+WS
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 177 MISGYAKVGDVDLARLFF-------DETPEK----------------------------- 200
M+SG+ K G A FF D TP++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 201 ----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDI----------------------- 233
D + ++++ Y ++ FKE + LF+++ D+
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 234 --------GPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKC 285
P+ + + +L ACA L+ G H R L +++ST+L+DMY KC
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 286 GNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEM-EKLGIKPDDITFIAV 344
+ + A +F +P +D+V W A+ISG ++G +++ FS M + +PD I + V
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 345 FTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSN 404
+CS G + K Y + LV+L SR G A + I
Sbjct: 373 LGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI---- 427
Query: 405 NGSEETLAWRAFLSACCNHGQAQLATLAAESLVR 438
++T+ W + ++ HG+ A +V+
Sbjct: 428 -ALKDTVVWTSLITGYGIHGKGTKALETFNHMVK 460
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/506 (30%), Positives = 244/506 (48%), Gaps = 46/506 (9%)
Query: 15 CKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCIC- 73
C + +KQ H + G D+ S + + + S G L A VF + +
Sbjct: 151 CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKG--GLLREAVSVFYGMDELRDEVSW 208
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLG-EMIHGYSS 132
N++I A+ + + L ++ M+ G D +T+ L A +L DH +G HG
Sbjct: 209 NSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSL-DHLIGGRQFHGKLI 267
Query: 133 KLGLLFDIFVGNSLIAMYCVFGD---MVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDL 189
K G + VG+ LI Y G M + KVF EI S V
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV----------------- 310
Query: 190 ARLFFDETPEKDKGIWGAMISGYVQNNCF-KEGLYLFRLMQLTDIGPDESIFVSILSACA 248
+W MISGY N +E + FR MQ PD+ FV + SAC+
Sbjct: 311 --------------VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACS 356
Query: 249 HMGALDTGVWVHRYLNRARLPLS-IRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWN 307
++ + +H ++ +P + I ++ +L+ +Y K GNL A+ +FD MP+ + V +N
Sbjct: 357 NLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFN 416
Query: 308 AMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSV 367
MI G A HG G AL L+ M GI P+ ITF+AV +AC++ G EG + + M
Sbjct: 417 CMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKET 476
Query: 368 YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
+ +EP++EHY C++DLL R G EEA R ++ ++AW A L AC H
Sbjct: 477 FKIEPEAEHYSCMIDLLGRAGKLEEA----ERFIDAMPYKPGSVAWAALLGACRKHKNMA 532
Query: 428 LATLAAESLVRLDNPSGL-YVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEID 486
LA AA L+ + + YV+++N+YA + + ++ VR M+ KR+ K PGCS +E+
Sbjct: 533 LAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVK 592
Query: 487 GVVMEFIAGEKTHPQMDEIHSILEKM 512
F+A + +HP + E++ LE+M
Sbjct: 593 KKKHVFVAEDWSHPMIREVNEYLEEM 618
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 205/464 (44%), Gaps = 52/464 (11%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G L+YA F + P V N I+KA+ + ++ +F + + PD + +
Sbjct: 57 GRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQ----PDTVSYNTLI 112
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFD---EIPSL 169
A R+ ++ KLG D F + LIA C D++ F S
Sbjct: 113 SGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSY 172
Query: 170 SAVSWSLMISGYAKVGDV-DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLM 228
S+V+ + ++ Y+K G + + +F+ +D+ W +MI Y Q+ + L L++ M
Sbjct: 173 SSVN-NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEM 231
Query: 229 QLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNL 288
D S+L+A + L G H L +A + + + L+D Y+KCG
Sbjct: 232 IFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGC 291
Query: 289 DL---AKRLFDSMPDRDIVCWNAMISGLAMHGD-GIGALKLFSEMEKLGIKPDDITFIAV 344
D ++++F + D+V WN MISG +M+ + A+K F +M+++G +PDD +F+ V
Sbjct: 292 DGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCV 351
Query: 345 FTACS----------------YSGMASEGLKLLDKMFSVY----NM-----------EPK 373
+ACS S + S + + + + S+Y N+ E
Sbjct: 352 TSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELN 411
Query: 374 SEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACC-----NHGQAQL 428
+ + C++ ++ G EA+++ +R+ +S + + + A LSAC + GQ
Sbjct: 412 AVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNK-ITFVAVLSACAHCGKVDEGQEYF 470
Query: 429 ATLAAESLVRLDNPSGLYVLISNLYAASGRHADVRRVRDVMKNK 472
T+ + +++ + Y + +L +G+ + R D M K
Sbjct: 471 NTM--KETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYK 512
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 3/232 (1%)
Query: 117 ALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSL 176
A RD G+ +H K + ++ N + +Y G + AR F + S+++
Sbjct: 20 AERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNV 79
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPD 236
++ YAK + +AR FDE P+ D + +ISGY + LF+ M+ D
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 237 ESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFD 296
+++AC +D +H + ++ + + Y+K G L A +F
Sbjct: 140 GFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 297 SMPD-RDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTA 347
M + RD V WN+MI H +G AL L+ EM G K D T +V A
Sbjct: 198 GMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 232/507 (45%), Gaps = 41/507 (8%)
Query: 10 TLLEKCKNMKQLK---QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
++L+ C + L+ Q H+Q+ + N++ S ++ + G L A + R
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDM--YAKLGKLDTAWDILIRFA 552
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
V T+I + ++ L F ML G+ D + A+ ACA L+ G+
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
IH + G D+ N+L+ +Y ++ G
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLY-------------------------------SRCGK 641
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
++ + L F++T D W A++SG+ Q+ +E L +F M I + F S + A
Sbjct: 642 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
+ + G VH + + + +L+ MYAKCG++ A++ F + ++ V W
Sbjct: 702 ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSW 761
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
NA+I+ + HG G AL F +M ++P+ +T + V +ACS+ G+ +G+ + M S
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 821
Query: 367 VYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
Y + PK EHY C+VD+L+R G A I+ + + L WR LSAC H
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPI----KPDALVWRTLLSACVVHKNM 877
Query: 427 QLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEI 485
++ AA L+ L+ S YVL+SNLYA S + R MK K V K PG S +E+
Sbjct: 878 EIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV 937
Query: 486 DGVVMEFIAGEKTHPQMDEIHSILEKM 512
+ F G++ HP DEIH + +
Sbjct: 938 KNSIHSFYVGDQNHPLADEIHEYFQDL 964
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 184/423 (43%), Gaps = 42/423 (9%)
Query: 10 TLLEKCKNMKQLK---QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
++L CK ++ L+ Q H V G ++++ + +++ + H G+L A +F +
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL--YFHLGNLISAEHIFSNMS 350
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
NT+I G + + +F M +GL PD+ T+ + AC+A G+
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
+H Y++KLG F N+ I +++ YAK D
Sbjct: 411 LHAYTTKLG-----FASNNKIE--------------------------GALLNLYAKCAD 439
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
++ A +F ET ++ +W M+ Y + + +FR MQ+ +I P++ + SIL
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
C +G L+ G +H + + L+ + + L+DMYAK G LD A + +D+V W
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 559
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
MI+G + AL F +M GI+ D++ +AC+ EG ++ +
Sbjct: 560 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA-C 618
Query: 367 VYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
V LV L SR G EE+ + + +N +AW A +S G
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-----IAWNALVSGFQQSGNN 673
Query: 427 QLA 429
+ A
Sbjct: 674 EEA 676
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 163/354 (46%), Gaps = 36/354 (10%)
Query: 11 LLEKC----KNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
LLE C ++ + ++ H+Q+ GLD+N ++ F + +G L A KVF +
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF--YLFKGDLYGAFKVFDEMP 147
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
T+ N +IK + +F M+ ++P+ T L+AC R S+
Sbjct: 148 ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC---RGGSVA-- 202
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
FD+ + + AR ++ + S V + +I Y++ G
Sbjct: 203 -----------FDVV-------------EQIHARILYQGLRD-STVVCNPLIDLYSRNGF 237
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
VDLAR FD KD W AMISG +N C E + LF M + I P F S+LSA
Sbjct: 238 VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA 297
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
C + +L+ G +H + + + +L+ +Y GNL A+ +F +M RD V +
Sbjct: 298 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 357
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL 360
N +I+GL+ G G A++LF M G++PD T ++ ACS G G +L
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 139/334 (41%), Gaps = 65/334 (19%)
Query: 100 GLSPDNYTIPYALKACAALRDHSL--GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMV 157
G+ P++ T+ + L+ C + SL G +H KLGL + + L Y GD+
Sbjct: 79 GIRPNHQTLKWLLEGCLK-TNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY 137
Query: 158 AARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNC 217
A KVFDE+ PE+ W MI N
Sbjct: 138 GAFKVFDEM-------------------------------PERTIFTWNKMIKELASRNL 166
Query: 218 FKEGLYLFRLMQLTDIGPDESIFVSILSACAHMG-ALDTGVWVHRYLNRARLPLSIRLST 276
E LF M ++ P+E F +L AC A D +H + L S +
Sbjct: 167 IGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCN 226
Query: 277 SLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKP 336
L+D+Y++ G +DLA+R+FD + +D W AMISGL+ + A++LF +M LGI P
Sbjct: 227 PLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMP 286
Query: 337 DDITFIAVFTACSY-----SGMASEGLKL----------LDKMFSVY------------- 368
F +V +AC G GL L + + S+Y
Sbjct: 287 TPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 346
Query: 369 -NMEPKSE-HYGCLVDLLSRTGFFEEAMVIIRRI 400
NM + Y L++ LS+ G+ E+AM + +R+
Sbjct: 347 SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/460 (30%), Positives = 229/460 (49%), Gaps = 41/460 (8%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNML-RNGLSPDNYTIPYA 111
G ++YA ++F + + N +I + NG + F M +NGL PD T
Sbjct: 281 GEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINL 340
Query: 112 LKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSA 171
L A A L G IHGY+ + G L + + +LI MY
Sbjct: 341 LPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMY--------------------- 375
Query: 172 VSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
+ G + A + FD EK+ W ++I+ YVQN L LF+ + +
Sbjct: 376 ----------GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS 425
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
+ PD + SIL A A +L G +H Y+ ++R + + SL+ MYA CG+L+ A
Sbjct: 426 SLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDA 485
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYS 351
++ F+ + +D+V WN++I A+HG G ++ LFSEM + P+ TF ++ ACS S
Sbjct: 486 RKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSIS 545
Query: 352 GMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETL 411
GM EG + + M Y ++P EHYGC++DL+ RTG F A +R
Sbjct: 546 GMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAA----KRFLEEMPFVPTAR 601
Query: 412 AWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMK 470
W + L+A NH +A AAE + +++ + +G YVL+ N+YA +GR DV R++ +M+
Sbjct: 602 IWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLME 661
Query: 471 NKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILE 510
+K + + S+VE G F G+++H ++I+ +L+
Sbjct: 662 SKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLD 701
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 166/371 (44%), Gaps = 45/371 (12%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
A ++F + + N +IK F G + ++ M+ G+ D +T P+ +K+ A
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 118 LRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLM 177
+ G+ IH KLG + D++V NSLI++Y G A KVF+
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFE------------- 189
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDE 237
E PE+D W +MISGY+ L LF+ M PD
Sbjct: 190 ------------------EMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDR 231
Query: 238 SIFVSILSACAHMGALDTGVWVHRYLNRARLPLS-IRLSTSLLDMYAKCGNLDLAKRLFD 296
+S L AC+H+ + G +H + R+R+ + + TS+LDMY+K G + A+R+F+
Sbjct: 232 FSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFN 291
Query: 297 SMPDRDIVCWNAMISGLAMHGDGIGALKLFSEM-EKLGIKPDDITFIAVFTACS-YSGMA 354
M R+IV WN MI A +G A F +M E+ G++PD IT I + A + G
Sbjct: 292 GMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRT 351
Query: 355 SEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWR 414
G + +E L+D+ G + A VI R+ N ++W
Sbjct: 352 IHGYAMRRGFLPHMVLET------ALIDMYGECGQLKSAEVIFDRMAEKN-----VISWN 400
Query: 415 AFLSACCNHGQ 425
+ ++A +G+
Sbjct: 401 SIIAAYVQNGK 411
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 204/436 (46%), Gaps = 58/436 (13%)
Query: 17 NMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTI 76
++++ K+ HA V G ++ + + +++ + G A KVF+ + + N++
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISL--YMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 77 IKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGL 136
I +L G+ +L +F ML+ G PD ++ AL AC+ + +G+ IH ++ + +
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 137 -LFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFD 195
D+ V S++ MY +G++ A ++F+ + + V+W++MI YA+ G V A L F
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 196 ETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDT 255
+ E++ + PD +++L A A+
Sbjct: 323 KMSEQN------------------------------GLQPDVITSINLLPA----SAILE 348
Query: 256 GVWVHRY-LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLA 314
G +H Y + R LP + L T+L+DMY +CG L A+ +FD M +++++ WN++I+
Sbjct: 349 GRTIHGYAMRRGFLPHMV-LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYV 407
Query: 315 MHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKS 374
+G AL+LF E+ + PD T ++ A + S SEG + ++ KS
Sbjct: 408 QNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGRE-------IHAYIVKS 460
Query: 375 EHY------GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQL 428
++ LV + + G E+A I ++ ++W + + A HG ++
Sbjct: 461 RYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL-----LKDVVSWNSIIMAYAVHGFGRI 515
Query: 429 AT-LAAESLVRLDNPS 443
+ L +E + NP+
Sbjct: 516 SVWLFSEMIASRVNPN 531
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%)
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDE 237
+ G+A ++ A FDE + D +W MI G+ + E + + M + D
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 238 SIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDS 297
+ ++ + A + +L+ G +H + + + + SL+ +Y K G A+++F+
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 298 MPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSY 350
MP+RDIV WN+MISG GDG +L LF EM K G KPD + ++ ACS+
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 155/487 (31%), Positives = 237/487 (48%), Gaps = 48/487 (9%)
Query: 1 MSSCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACK 60
+SS K C L E ++ + H V T G + N F +S LA+ ++ + A +
Sbjct: 166 LSSAVKACSELGE----VRLGRCFHGVVITHGFEWNHF-ISSTLAYLYGVNREPVD-ARR 219
Query: 61 VFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLR-NGLSPDNYTIPYALKACAALR 119
VF + P V ++ AF N L +F M R GL PD T L AC LR
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 120 DHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMIS 179
G+ IHG G+ ++ V +SL+ MY
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMY----------------------------- 310
Query: 180 GYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
K G V AR F+ +K+ W A++ GY QN ++ + +FR M+ D+
Sbjct: 311 --GKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YC 364
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
F ++L ACA + A+ G +H R ++ + ++L+D+Y K G +D A R++ M
Sbjct: 365 FGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS 424
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK 359
R+++ WNAM+S LA +G G A+ F++M K GIKPD I+FIA+ TAC ++GM EG
Sbjct: 425 IRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRN 484
Query: 360 LLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSA 419
M Y ++P +EHY C++DLL R G FEEA ++ R N+ S W L
Sbjct: 485 YFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDAS----LWGVLLGP 540
Query: 420 C-CNHGQAQLATLAAESLVRLDNPSGL-YVLISNLYAASGRHADVRRVRDVMKNKRVDKA 477
C N +++A A+ ++ L+ + YVL+SN+Y A GRH D +R +M + V K
Sbjct: 541 CAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKT 600
Query: 478 PGCSSVE 484
G S ++
Sbjct: 601 VGQSWID 607
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 198/434 (45%), Gaps = 64/434 (14%)
Query: 10 TLLEKCKNMKQLK---QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
+LL+ C + Q HA V SGL+ + + +L+ G + +VF
Sbjct: 66 SLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPG-MRETRRVFDGRF 124
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
+++ ++ + L VF M+ GL + +T+ A+KAC+ L + LG
Sbjct: 125 VKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRC 184
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
HG G ++ F+ ++L +Y V + V AR+VFDE+P + W+ ++S ++K
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK--- 241
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQL-TDIGPDESIFVSILS 245
N+ ++E L LF M + PD S F ++L+
Sbjct: 242 ----------------------------NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLT 273
Query: 246 ACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVC 305
AC ++ L G +H L + ++ + +SLLDMY KCG++ A+++F+ M ++ V
Sbjct: 274 ACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVS 333
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMF 365
W+A++ G +G+ A+++F EME + D F V AC +G+A+ ++L ++
Sbjct: 334 WSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKAC--AGLAA--VRLGKEIH 385
Query: 366 SVYNMEPKSEHYGC---------LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAF 416
Y GC L+DL ++G + A + +++ N + W A
Sbjct: 386 GQYVRR------GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRN-----MITWNAM 434
Query: 417 LSACCNHGQAQLAT 430
LSA +G+ + A
Sbjct: 435 LSALAQNGRGEEAV 448
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 222/419 (52%), Gaps = 10/419 (2%)
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
T C+ NT+I+++L G +L +FT+ML + + P+N T P +KA + S G +H
Sbjct: 50 TKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALH 109
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVD 188
G + K G L+D FV S + Y GD+ ++RK+FD+I + V+ + ++ + G++D
Sbjct: 110 GQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMD 169
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD---IGPDESIFVSILS 245
A +F P D W +I+G+ + + L +F M + I P+E+ FVS+LS
Sbjct: 170 YAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLS 229
Query: 246 ACAHM--GALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI 303
+CA+ G + G +H Y+ + L+ L T+LLDMY K G+L++A +FD + D+ +
Sbjct: 230 SCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKV 289
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDK 363
WNA+IS LA +G AL++F M+ + P+ IT +A+ TAC+ S + G++L
Sbjct: 290 CAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSS 349
Query: 364 MFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNH 423
+ S Y + P SEHYGC+VDL+ R G +A I+ + + S A L AC H
Sbjct: 350 ICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDAS----VLGALLGACKIH 405
Query: 424 GQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCS 481
+L + L+ L G YV +S A ++ ++R M + K P S
Sbjct: 406 ENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 136/327 (41%), Gaps = 55/327 (16%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNG---LSPDNYTIP 109
G + YA + FQR+ V T+I F G + L VF M++N ++P+ T
Sbjct: 166 GEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFV 225
Query: 110 YALKACAALRDHS--LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP 167
L +CA LG+ IHGY ++ +G +L+ MY GD+ A +FD+I
Sbjct: 226 SVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI- 284
Query: 168 SLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGI--WGAMISGYVQNNCFKEGLYLF 225
+DK + W A+IS N K+ L +F
Sbjct: 285 --------------------------------RDKKVCAWNAIISALASNGRPKQALEMF 312
Query: 226 RLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYL-NRARLPLSIRLSTSLLDMYAK 284
+M+ + + P+ ++IL+ACA +D G+ + + + ++ + ++D+ +
Sbjct: 313 EMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGR 372
Query: 285 CGNLDLAKRLFDSMP-DRDIVCWNAMISGLAMH-----GDGIGALKLFSEMEKLGIKPDD 338
G L A S+P + D A++ +H G+ +G + +G++P
Sbjct: 373 AGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGK-------QLIGLQPQH 425
Query: 339 I-TFIAVFTACSYSGMASEGLKLLDKM 364
++A+ T + SE K+ M
Sbjct: 426 CGQYVALSTFNALDSNWSEAEKMRKAM 452
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 134/462 (29%), Positives = 229/462 (49%), Gaps = 38/462 (8%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRN--GLSPDNYTIPYALKAC 115
A K+F + + N++I + G L + V + M+ + G P+ T + AC
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 116 AALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWS 175
G IHG K G+L ++ V N+ I Y GD+ ++ K+F+++ + VS
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVS-- 202
Query: 176 LMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGP 235
W MI ++QN ++GL F + + P
Sbjct: 203 -----------------------------WNTMIVIHLQNGLAEKGLAYFNMSRRVGHEP 233
Query: 236 DESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLF 295
D++ F+++L +C MG + +H + + ++T+LLD+Y+K G L+ + +F
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVF 293
Query: 296 DSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMAS 355
+ D + W AM++ A HG G A+K F M GI PD +TF + ACS+SG+
Sbjct: 294 HEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVE 353
Query: 356 EGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRA 415
EG + M Y ++P+ +HY C+VDLL R+G ++A +I+ + + W A
Sbjct: 354 EGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSG----VWGA 409
Query: 416 FLSACCNHGQAQLATLAAESLVRLDNPSGL-YVLISNLYAASGRHADVRRVRDVMKNKRV 474
L AC + QL T AAE L L+ G YV++SN+Y+ASG D R+R++MK K +
Sbjct: 410 LLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGL 469
Query: 475 DKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
+A GCS +E + +F+ G+ +HP+ ++I L+++ ++
Sbjct: 470 VRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKM 511
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 223/410 (54%), Gaps = 9/410 (2%)
Query: 104 DNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVF 163
D+ + L++C A + H KLG + S +A Y AR++
Sbjct: 29 DHGMLKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLL 88
Query: 164 DEIPSLS--AVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEG 221
SLS + +L+I K+G+ LA+ +++ W MI GYV+N ++E
Sbjct: 89 LWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEA 148
Query: 222 LYLFR-LMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLD 280
L + ++ TDI P++ F S L+ACA +G L WVH + + + L+ LS++L+D
Sbjct: 149 LKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVD 208
Query: 281 MYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDIT 340
+YAKCG++ ++ +F S+ D+ WNAMI+G A HG A+++FSEME + PD IT
Sbjct: 209 VYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSIT 268
Query: 341 FIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRI 400
F+ + T CS+ G+ EG + M ++++PK EHYG +VDLL R G +EA +I
Sbjct: 269 FLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELI--- 325
Query: 401 TNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAASGRHA 460
S + + WR+ LS+ + +L +A ++L + SG YVL+SN+Y+++ +
Sbjct: 326 -ESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKA--KSGDYVLLSNIYSSTKKWE 382
Query: 461 DVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILE 510
++VR++M + + KA G S +E G++ F AG+ +H + I+ +LE
Sbjct: 383 SAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLE 432
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 137/339 (40%), Gaps = 70/339 (20%)
Query: 11 LLEKCK---NMKQLKQAHAQVFTSGLD----------------NNSFALSRVLAF----- 46
+LE CK N K + QAHAQ+F G N S+ R+L +
Sbjct: 36 VLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLS 95
Query: 47 ---C-------SHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNM 96
C S G A KV + V N +I ++ N L NM
Sbjct: 96 PGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM 155
Query: 97 LR-NGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGD 155
L + P+ ++ +L ACA L D + +H G+ + + ++L+ +Y GD
Sbjct: 156 LSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGD 215
Query: 156 MVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQN 215
+ +R+VF + W+ MI+G+A G LA
Sbjct: 216 IGTSREVFYSVKRNDVSIWNAMITGFATHG---LA------------------------- 247
Query: 216 NCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLS 275
E + +F M+ + PD F+ +L+ C+H G L+ G ++R R + +L
Sbjct: 248 ---TEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSR-RFSIQPKLE 303
Query: 276 --TSLLDMYAKCGNLDLAKRLFDSMP-DRDIVCWNAMIS 311
+++D+ + G + A L +SMP + D+V W +++S
Sbjct: 304 HYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 220/418 (52%), Gaps = 38/418 (9%)
Query: 94 TNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVF 153
+++ R+G S D Y + A+++C RD G H + K G + D+++G+SL+ +Y
Sbjct: 109 SSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDS 168
Query: 154 GDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYV 213
G++ A KVF+ E PE++ W AMISG+
Sbjct: 169 GEVENAYKVFE-------------------------------EMPERNVVSWTAMISGFA 197
Query: 214 QNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIR 273
Q L L+ M+ + P++ F ++LSAC GAL G VH L +
Sbjct: 198 QEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLH 257
Query: 274 LSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFS-EMEKL 332
+S SL+ MY KCG+L A R+FD ++D+V WN+MI+G A HG + A++LF M K
Sbjct: 258 ISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKS 317
Query: 333 GIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEE 392
G KPD IT++ V ++C ++G+ EG K + M + + ++P+ HY CLVDLL R G +E
Sbjct: 318 GTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM-AEHGLKPELNHYSCLVDLLGRFGLLQE 376
Query: 393 AMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISN 451
A+ +I + N ++ W + L +C HG AAE + L+ + + +V ++N
Sbjct: 377 ALELIENMPMKPN----SVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLAN 432
Query: 452 LYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSIL 509
LYA+ G + VR +MK+K + PGCS +EI+ V F A + ++ +M EI +L
Sbjct: 433 LYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVL 490
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 35/287 (12%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + A KVF+ + V +I F ++ L +++ M ++ P++YT L
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
AC G +H + +GL + + NSLI+MYC GD+ A ++FD+ + V
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQ-LT 231
SW+ MI+GYA Q+ + + LF LM +
Sbjct: 289 SWNSMIAGYA-------------------------------QHGLAMQAIELFELMMPKS 317
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
PD ++ +LS+C H G + G + L + + L+D+ + G L A
Sbjct: 318 GTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEA 377
Query: 292 KRLFDSMPDR-DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPD 337
L ++MP + + V W +++ +HGD ++ + E+L ++PD
Sbjct: 378 LELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIR--AAEERLMLEPD 422
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 255/520 (49%), Gaps = 29/520 (5%)
Query: 11 LLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH 67
L++ C + L K+ H + TSG +R+L + GSL A KVF + +
Sbjct: 91 LIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM--YAKCGSLVDARKVFDEMPN 148
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNML-RNGLSPDNYTIPYALK--ACAALRDHSLG 124
+C N ++ + G L +F M ++ S Y K AL +SL
Sbjct: 149 RDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLM 208
Query: 125 EMIHGYSSKLGLLFDIFVGNSLIAMYCV------FGDMVAARKVFDEIPSLSAVSWSLMI 178
+ + +S+ + + A+ C+ G +V A DE V WS ++
Sbjct: 209 QRVP--NSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDE------VLWSSLM 260
Query: 179 SGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDES 238
Y K G +D AR FD+ EKD W +MI Y +++ ++EG LF + + P+E
Sbjct: 261 DMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEY 320
Query: 239 IFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM 298
F +L+ACA + + G VH Y+ R S+SL+DMY KCGN++ AK + D
Sbjct: 321 TFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC 380
Query: 299 PDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGL 358
P D+V W ++I G A +G ALK F + K G KPD +TF+ V +AC+++G+ +GL
Sbjct: 381 PKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGL 440
Query: 359 KLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLS 418
+ + + + S+HY CLVDLL+R+G FE+ +I + + W + L
Sbjct: 441 EFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPS----KFLWASVLG 496
Query: 419 ACCNHGQAQLATLAAESLVRL--DNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDK 476
C +G LA AA+ L ++ +NP YV ++N+YAA+G+ + ++R M+ V K
Sbjct: 497 GCSTYGNIDLAEEAAQELFKIEPENPV-TYVTMANIYAAAGKWEEEGKMRKRMQEIGVTK 555
Query: 477 APGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
PG S EI FIA + +HP ++I L ++ ++
Sbjct: 556 RPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKM 595
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 166/344 (48%), Gaps = 7/344 (2%)
Query: 87 NRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSL 146
+ L +L P T ++ C+ R G+ +H + G + I + N L
Sbjct: 67 QKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRL 126
Query: 147 IAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWG 206
+ MY G +V ARKVFDE+P+ SW++M++GYA+VG ++ AR FDE EKD W
Sbjct: 127 LRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWT 186
Query: 207 AMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGA-LDTGVWVHRYLNR 265
AM++GYV+ + +E L L+ LMQ VSI A A + G +H ++ R
Sbjct: 187 AMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVR 246
Query: 266 ARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKL 325
A L L +SL+DMY KCG +D A+ +FD + ++D+V W +MI L
Sbjct: 247 AGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSL 306
Query: 326 FSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLS 385
FSE+ +P++ TF V AC+ G ++ M V +P S LVD+ +
Sbjct: 307 FSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLVDMYT 365
Query: 386 RTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
+ G E A ++ + ++W + + C +GQ A
Sbjct: 366 KCGNIESAKHVV-----DGCPKPDLVSWTSLIGGCAQNGQPDEA 404
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 152/501 (30%), Positives = 246/501 (49%), Gaps = 48/501 (9%)
Query: 18 MKQLKQAHAQVFTSGLDNN----SFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCIC 73
+++ K H LD N S AL + A C G L+ V + + +
Sbjct: 319 IREGKSVHGFAVRRELDPNYESLSLALVELYAEC-----GKLSDCETVLRVVSDRNIVAW 373
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
N++I + G + + L +F M+ + PD +T+ ++ AC LG+ IHG+ +
Sbjct: 374 NSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIR 433
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
+ D FV NSLI MY +K G VD A
Sbjct: 434 TDV-SDEFVQNSLIDMY-------------------------------SKSGSVDSASTV 461
Query: 194 FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGAL 253
F++ + W +M+ G+ QN E + LF M + + +E F++++ AC+ +G+L
Sbjct: 462 FNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL 521
Query: 254 DTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGL 313
+ G WVH L + L + T+L+DMYAKCG+L+ A+ +F +M R IV W++MI+
Sbjct: 522 EKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAY 580
Query: 314 AMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPK 373
MHG A+ F++M + G KP+++ F+ V +AC +SG EG + M S + + P
Sbjct: 581 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPN 639
Query: 374 SEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAA 433
SEH+ C +DLLSR+G +EA I+ + + S W + ++ C H + +
Sbjct: 640 SEHFACFIDLLSRSGDLKEAYRTIKEMPFLADAS----VWGSLVNGCRIHQKMDIIKAIK 695
Query: 434 ESLVRL-DNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEF 492
L + + +G Y L+SN+YA G + RR+R MK+ + K PG S++EID V F
Sbjct: 696 NDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRF 755
Query: 493 IAGEKTHPQMDEIHSILEKMH 513
AGE+ Q DEI+ L +
Sbjct: 756 GAGEENRIQTDEIYRFLGNLQ 776
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 191/419 (45%), Gaps = 42/419 (10%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSG-LDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH 67
+ L C +++ + Q HA + +G L + +++++ S+ GS + VF+ +
Sbjct: 5 MPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIE--SYAFMGSPDSSRLVFEAFPY 62
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDH-SLGEM 126
P + +IK + L+ + ++ ++ + P L+ACA R+H S+G
Sbjct: 63 PDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGK 122
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
+HG K G+ D + SL+ MY G++ A KVFD +P V+WS ++S + G+
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGE 182
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
V + L +F+ M + PD +S++
Sbjct: 183 V-------------------------------VKALRMFKCMVDDGVEPDAVTMISVVEG 211
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
CA +G L VH + R L L SLL MY+KCG+L ++R+F+ + ++ V W
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSW 271
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
AMIS AL+ FSEM K GI+P+ +T +V ++C G+ EG K +
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREG-KSVHGFAV 330
Query: 367 VYNMEPKSEHYG-CLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
++P E LV+L + G + ++R +++ N +AW + +S + G
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRN-----IVAWNSLISLYAHRG 384
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 192/405 (47%), Gaps = 41/405 (10%)
Query: 23 QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLI 82
+ H ++ G+D+++ + +L C + G+L+ A KVF + + +T++ + L
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLL--CMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLE 179
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFV 142
NG + + L +F M+ +G+ PD T+ ++ CA L + +HG ++ D +
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL 239
Query: 143 GNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDK 202
NSL+ MY GD++++ ++F++I +AVSW+ MIS Y + E EK
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR-----------GEFSEK-- 286
Query: 203 GIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRY 262
L F M + I P+ S+LS+C +G + G VH +
Sbjct: 287 ------------------ALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGF 328
Query: 263 LNRARL-PLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG 321
R L P LS +L+++YA+CG L + + + DR+IV WN++IS A G I
Sbjct: 329 AVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQ 388
Query: 322 ALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLV 381
AL LF +M IKPD T + +AC +G+ G ++ + + ++ L+
Sbjct: 389 ALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQN--SLI 446
Query: 382 DLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
D+ S++G + A + +I + + + W + L +G +
Sbjct: 447 DMYSKSGSVDSASTVFNQIKHRS-----VVTWNSMLCGFSQNGNS 486
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 159/352 (45%), Gaps = 36/352 (10%)
Query: 9 LTLLEKCKNMKQLKQA---HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRI 65
++++E C + L+ A H Q+ D + + +L S G L + ++F++I
Sbjct: 206 ISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKC--GDLLSSERIFEKI 263
Query: 66 QHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGE 125
+I ++ + L F+ M+++G+ P+ T+ L +C + G+
Sbjct: 264 AKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGK 323
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
+HG+ A R+ D P+ ++S +L + YA+ G
Sbjct: 324 SVHGF---------------------------AVRRELD--PNYESLSLAL-VELYAECG 353
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILS 245
+ +++ W ++IS Y + L LFR M I PD S +S
Sbjct: 354 KLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSIS 413
Query: 246 ACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVC 305
AC + G + G +H ++ R + + SL+DMY+K G++D A +F+ + R +V
Sbjct: 414 ACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVT 472
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEG 357
WN+M+ G + +G+ + A+ LF M ++ +++TF+AV ACS G +G
Sbjct: 473 WNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKG 524
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 147/331 (44%), Gaps = 33/331 (9%)
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPD 236
+I YA +G D +RL F+ P D ++G +I V + + L+ +
Sbjct: 40 LIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQIS 99
Query: 237 ESIFVSILSACA-HMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLF 295
+ +F S+L ACA L G VH + + + + TSLL MY + GNL A+++F
Sbjct: 100 KFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVF 159
Query: 296 DSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG--- 352
D MP RD+V W+ ++S +G+ + AL++F M G++PD +T I+V C+ G
Sbjct: 160 DGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLR 219
Query: 353 -MASEGLKLLDKMFSVYNMEPKS--EHYGCLVDLLSRTGFFEE-----AMVIIRRITNSN 404
S ++ KMF + S Y DLLS FE+ A+ I++ N
Sbjct: 220 IARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYN 279
Query: 405 NGSEETLAWRAFLSACCNHGQAQLATLAAE-------SLVR-------------LD-NPS 443
G A R+F + + L TL + L+R LD N
Sbjct: 280 RGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYE 339
Query: 444 GLYVLISNLYAASGRHADVRRVRDVMKNKRV 474
L + + LYA G+ +D V V+ ++ +
Sbjct: 340 SLSLALVELYAECGKLSDCETVLRVVSDRNI 370
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/415 (32%), Positives = 216/415 (52%), Gaps = 38/415 (9%)
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFV 142
NG+ L V+ +ML + + P N++I ALKAC L+D +G IH K D V
Sbjct: 214 NGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVV 273
Query: 143 GNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDK 202
N L+ +Y G +FD+ AR FD E++
Sbjct: 274 YNVLLKLYMESG-------LFDD------------------------ARKVFDGMSERNV 302
Query: 203 GIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRY 262
W ++IS + E LFR MQ IG + +IL AC+ + AL TG +H
Sbjct: 303 VTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQ 362
Query: 263 LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGA 322
+ +++ + L SL+DMY KCG ++ ++R+FD M +D+ WN M++ A++G+
Sbjct: 363 ILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEV 422
Query: 323 LKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVD 382
+ LF M + G+ PD ITF+A+ + CS +G+ GL L ++M + + + P EHY CLVD
Sbjct: 423 INLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVD 482
Query: 383 LLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-- 440
+L R G +EA+ +I + + S W + L++C HG + +AA+ L L+
Sbjct: 483 ILGRAGKIKEAVKVIETMPFKPSAS----IWGSLLNSCRLHGNVSVGEIAAKELFVLEPH 538
Query: 441 NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAG 495
NP G YV++SN+YA + +V ++R++MK + V K GCS V++ + F+AG
Sbjct: 539 NP-GNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 3/178 (1%)
Query: 175 SLMISGYAKVGDVDLARLFFDETPEKD---KGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
S +I+ ++ +DLAR FD+ + + +W AM GY +N ++ L ++ M +
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
I P L AC + L G +H + + + + + LL +Y + G D A
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
+++FD M +R++V WN++IS L+ LF +M++ I T + ACS
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACS 348
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 136/324 (41%), Gaps = 42/324 (12%)
Query: 12 LEKCKNMKQLKQA---HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
L+ C ++K L+ HAQ+ + + +L + G A KVF +
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKL--YMESGLFDDARKVFDGMSER 300
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
V N++I ++ ++F M + T+ L AC+ + G+ IH
Sbjct: 301 NVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIH 360
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVD 188
K D+ + NSL+ MY G++ +R+VFD + + SW++M++ YA G+++
Sbjct: 361 AQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIE 420
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
E + LF M + + PD FV++LS C+
Sbjct: 421 -------------------------------EVINLFEWMIESGVAPDGITFVALLSGCS 449
Query: 249 HMGALDTGVWV-HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR-DIVCW 306
G + G+ + R R+ ++ L+D+ + G + A ++ ++MP + W
Sbjct: 450 DTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIW 509
Query: 307 NAMISGLAMHGD----GIGALKLF 326
++++ +HG+ I A +LF
Sbjct: 510 GSLLNSCRLHGNVSVGEIAAKELF 533
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 85/191 (44%), Gaps = 24/191 (12%)
Query: 240 FVSILSACAHMGALDTGVWV-HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM 298
+ +L AC +L G+ + LN L + +L + L+ +++ C LDLA+++FD +
Sbjct: 134 YTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDV 193
Query: 299 PDRDIV---CWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTAC------- 348
D ++ W AM G + +G AL ++ +M I+P + + AC
Sbjct: 194 TDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLR 253
Query: 349 SYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSE 408
G+ ++ +K +K+ V Y L+ L +G F++A + ++ N
Sbjct: 254 VGRGIHAQIVKRKEKVDQVV--------YNVLLKLYMESGLFDDARKVFDGMSERN---- 301
Query: 409 ETLAWRAFLSA 419
+ W + +S
Sbjct: 302 -VVTWNSLISV 311
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/463 (30%), Positives = 224/463 (48%), Gaps = 38/463 (8%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + A VF ++ N+II ++ +G+L + +F M+ D+ T +
Sbjct: 356 GDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLI 415
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
L D G+ +H K G+ D+ V N+LI MY
Sbjct: 416 SVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY---------------------- 453
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
AK G+V + F D W +IS V+ F GL + M+ ++
Sbjct: 454 ---------AKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE 504
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
+ PD + F+ L CA + A G +H L R +++ +L++MY+KCG L+ +
Sbjct: 505 VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSS 564
Query: 293 RLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
R+F+ M RD+V W MI M+G+G AL+ F++MEK GI PD + FIA+ ACS+SG
Sbjct: 565 RVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSG 624
Query: 353 MASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLA 412
+ EGL +KM + Y ++P EHY C+VDLLSR+ +A I+ + + S
Sbjct: 625 LVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDAS----I 680
Query: 413 WRAFLSACCNHGQAQLATLAAESLVRL--DNPSGLYVLISNLYAASGRHADVRRVRDVMK 470
W + L AC G + A + ++ L D+P G +L SN YAA + V +R +K
Sbjct: 681 WASVLRACRTSGDMETAERVSRRIIELNPDDP-GYSILASNAYAALRKWDKVSLIRKSLK 739
Query: 471 NKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMH 513
+K + K PG S +E+ V F +G+ + PQ + I+ LE ++
Sbjct: 740 DKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILY 782
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 200/421 (47%), Gaps = 55/421 (13%)
Query: 12 LEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ-HPTV 70
L N+ +L++ HA V + GLD++ F +++ SH + + + + VF+R+ V
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLS--VFRRVSPAKNV 71
Query: 71 CICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGY 130
+ N+II+AF NG L + + + +SPD YT P +KACA L D +G++++
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 131 SSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLA 190
+G D+FVGN+L+ MY G + AR+VFDE+P VSW+ +ISGY+
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSS------- 184
Query: 191 RLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHM 250
GY ++E L ++ ++ + I PD S+L A ++
Sbjct: 185 -------------------HGY-----YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNL 220
Query: 251 GALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMI 310
+ G +H + ++ + + ++ L+ MY K A+R+FD M RD V +N MI
Sbjct: 221 LVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMI 280
Query: 311 SGLAMHGDGIGALKLFSEMEKLG-IKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYN 369
G ++++F +E L KPD +T +V AC + L+ L +YN
Sbjct: 281 CGYLKLEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGH-------LRDLSLAKYIYN 331
Query: 370 MEPK------SEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNH 423
K S L+D+ ++ G M+ R + NS ++T++W + +S
Sbjct: 332 YMLKAGFVLESTVRNILIDVYAKCG----DMITARDVFNSME-CKDTVSWNSIISGYIQS 386
Query: 424 G 424
G
Sbjct: 387 G 387
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 190/410 (46%), Gaps = 60/410 (14%)
Query: 25 HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLING 84
+ Q+ G +++ F + ++ S G LT A +VF + + N++I + +G
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSR--MGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 85 NLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGN 144
L ++ + + + PD++T+ L A L G+ +HG++ K G+ + V N
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 145 SLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGI 204
L+AMY F AR+VFDE+ +VS++ MI GY K+ V+
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVE---------------- 290
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLN 264
E + +F L L PD S+L AC H+ L +++ Y+
Sbjct: 291 ---------------ESVRMF-LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYML 334
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALK 324
+A L + L+D+YAKCG++ A+ +F+SM +D V WN++ISG GD + A+K
Sbjct: 335 KAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMK 394
Query: 325 LFSEMEKLGIKPDDITFIAVFTACSY-------SGMASEGLK---LLDKMFSVYNMEPKS 374
LF M + + D IT++ + + + G+ S G+K +D SV N
Sbjct: 395 LFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICID--LSVSN----- 447
Query: 375 EHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
L+D+ ++ G +++ I S+ G+ +T+ W +SAC G
Sbjct: 448 ----ALIDMYAKCGEVGDSLKIF-----SSMGTGDTVTWNTVISACVRFG 488
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 175/405 (43%), Gaps = 46/405 (11%)
Query: 56 TYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKAC 115
T A +VF + NT+I +L + ++ +F L + PD T+ L+AC
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRAC 317
Query: 116 AALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWS 175
LRD SL + I+ Y K G + + V N LI +Y
Sbjct: 318 GHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVY------------------------- 352
Query: 176 LMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGP 235
AK GD+ AR F+ KD W ++ISGY+Q+ E + LF++M + +
Sbjct: 353 ------AKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA 406
Query: 236 DESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLF 295
D ++ ++S + L G +H ++ + + + +S +L+DMYAKCG + + ++F
Sbjct: 407 DHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIF 466
Query: 296 DSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMAS 355
SM D V WN +IS GD L++ ++M K + PD TF+ C AS
Sbjct: 467 SSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC-----AS 521
Query: 356 EGLKLLDKMFSV----YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETL 411
K L K + E + + L+++ S+ G E + + R++ + +
Sbjct: 522 LAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSR-----RDVV 576
Query: 412 AWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAAS 456
W + A +G+ + A + + V I+ +YA S
Sbjct: 577 TWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACS 621
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/476 (31%), Positives = 231/476 (48%), Gaps = 56/476 (11%)
Query: 10 TLLEKCKNMKQLK---QAHAQVFTSGLDNN---SFALSRVLAFCSHPHQGSLTYACKVFQ 63
+LLE C +++ + + H + L NN S L R+ A C G A +VF
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASC-----GYAEVAHEVFD 151
Query: 64 RI--QHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDH 121
R+ + + N++I + G + ++ M +G+ PD +T P LKAC +
Sbjct: 152 RMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSV 211
Query: 122 SLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGY 181
+GE IH K G +D++V N+L+ MY
Sbjct: 212 QIGEAIHRDLVKEGFGYDVYVLNALVVMY------------------------------- 240
Query: 182 AKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFV 241
AK GD+ AR FD P KD W +M++GY+ + E L +FRLM I PD+ V
Sbjct: 241 AKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDK---V 297
Query: 242 SILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR 301
+I S A + + G +H ++ R + + ++ +L+ +Y+K G L A +FD M +R
Sbjct: 298 AISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLER 357
Query: 302 DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLL 361
D V WNA+IS + + +G LK F +M + KPD ITF++V + C+ +GM +G +L
Sbjct: 358 DTVSWNAIISAHSKNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLF 414
Query: 362 DKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACC 421
M Y ++PK EHY C+V+L R G EEA +I + G W A L AC
Sbjct: 415 SLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGP---TVWGALLYACY 471
Query: 422 NHGQAQLATLAAESLVRL--DNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVD 475
HG + +AA+ L L DN +LI +Y+ + R DV RVR +M ++ ++
Sbjct: 472 LHGNTDIGEVAAQRLFELEPDNEHNFELLI-RIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 236 DESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLF 295
+ IF S+L C + A+D GV VH + L ++ +S+ L+ +YA CG ++A +F
Sbjct: 91 EPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVF 150
Query: 296 DSMPDRD--IVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGM 353
D M RD WN++ISG A G A+ L+ +M + G+KPD TF V AC G
Sbjct: 151 DRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGS 210
Query: 354 ASEGLKLLDKM------FSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGS 407
G + + + VY + LV + ++ G +A + I +
Sbjct: 211 VQIGEAIHRDLVKEGFGYDVYVL-------NALVVMYAKCGDIVKARNVFDMIPH----- 258
Query: 408 EETLAWRAFLSACCNHG 424
++ ++W + L+ +HG
Sbjct: 259 KDYVSWNSMLTGYLHHG 275
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/494 (28%), Positives = 236/494 (47%), Gaps = 48/494 (9%)
Query: 22 KQAHAQVFTSGLDN-----NSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTI 76
K HA SG D N S CS +G VF + H V +
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRG-------VFDGMSHRNVITLTAV 227
Query: 77 IKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGL 136
I + N L +F+ M R + P++ T AL AC+ + G+ IH K G+
Sbjct: 228 ISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGI 287
Query: 137 LFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDE 196
++ + ++L+ MY +K G ++ A F+
Sbjct: 288 ESELCIESALMDMY-------------------------------SKCGSIEDAWTIFES 316
Query: 197 TPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTG 256
T E D+ ++ G QN +E + F M + D ++ ++L +L G
Sbjct: 317 TTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLG 376
Query: 257 VWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMH 316
+H + + + + ++ L++MY+KCG+L ++ +F MP R+ V WN+MI+ A H
Sbjct: 377 KQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARH 436
Query: 317 GDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEH 376
G G+ ALKL+ EM L +KP D+TF+++ ACS+ G+ +G +LL++M V+ +EP++EH
Sbjct: 437 GHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEH 496
Query: 377 YGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESL 436
Y C++D+L R G +EA I +S + W+A L AC HG ++ AAE L
Sbjct: 497 YTCIIDMLGRAGLLKEAKSFI----DSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQL 552
Query: 437 VRL-DNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAG 495
+ + S ++LI+N+Y++ G+ + + MK V K G SS+EI+ F+
Sbjct: 553 FQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVE 612
Query: 496 EKTHPQMDEIHSIL 509
+K HPQ + I+ +L
Sbjct: 613 DKLHPQAEAIYDVL 626
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 168/404 (41%), Gaps = 38/404 (9%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G L A K+F + V N + FL N + ML +G D+ T+ L
Sbjct: 104 GKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVL 162
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
C + +MIH + G +I VGN LI Y G V+ R VFD + + +
Sbjct: 163 SVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVI 222
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
+ + A+ISG ++N ++GL LF LM+
Sbjct: 223 TLT-------------------------------AVISGLIENELHEDGLRLFSLMRRGL 251
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
+ P+ ++S L+AC+ + G +H L + + + + ++L+DMY+KCG+++ A
Sbjct: 252 VHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAW 311
Query: 293 RLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
+F+S + D V ++ GLA +G A++ F M + G++ D AV
Sbjct: 312 TIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDN 371
Query: 353 MASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLA 412
G K L + + L+++ S+ G ++ + RR+ N ++
Sbjct: 372 SLGLG-KQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRN-----YVS 425
Query: 413 WRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAAS 456
W + ++A HG A E + L+ +S L+A S
Sbjct: 426 WNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACS 469
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 131/321 (40%), Gaps = 50/321 (15%)
Query: 9 LTLLEKCKNMKQL---KQAHAQVFTSGLDNN---SFALSRVLAFCSHPHQGSLTYACKVF 62
L+ L C +++ +Q HA ++ G+++ AL + + C GS+ A +F
Sbjct: 260 LSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKC-----GSIEDAWTIF 314
Query: 63 QRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHS 122
+ I+ NG+ + F ML+ G+ D + L
Sbjct: 315 ESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLG 374
Query: 123 LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYA 182
LG+ +H K + FV N LI MY GD+ ++ VF +P + VSW+ MI+ +A
Sbjct: 375 LGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFA 434
Query: 183 KVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVS 242
+ G LA L L+ M ++ P + F+S
Sbjct: 435 RHGH-GLA------------------------------ALKLYEEMTTLEVKPTDVTFLS 463
Query: 243 ILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTS----LLDMYAKCGNLDLAKRLFDSM 298
+L AC+H+G +D G LN + I T ++DM + G L AK DS+
Sbjct: 464 LLHACSHVGLIDKG---RELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSL 520
Query: 299 PDR-DIVCWNAMISGLAMHGD 318
P + D W A++ + HGD
Sbjct: 521 PLKPDCKIWQALLGACSFHGD 541
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 25/279 (8%)
Query: 151 CVFGDMVAARKVFD----EIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWG 206
C+ ++ + F+ +I + V W+ ++S YAK G + A FDE P +D
Sbjct: 66 CLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQN 125
Query: 207 AMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRA 266
+ G+++N + G L + M L G D + +LS C +H +
Sbjct: 126 IVFYGFLRNRETESGFVLLKRM-LGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILS 184
Query: 267 RLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGL---AMHGDGIGAL 323
I + L+ Y KCG + +FD M R+++ A+ISGL +H DG L
Sbjct: 185 GYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDG---L 241
Query: 324 KLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDL 383
+LFS M + + P+ +T+++ ACS S EG ++ ++ Y +E + L+D+
Sbjct: 242 RLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWK-YGIESELCIESALMDM 300
Query: 384 LSRTGFFEEAMVIIRRITN-------------SNNGSEE 409
S+ G E+A I T + NGSEE
Sbjct: 301 YSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEE 339
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 148/466 (31%), Positives = 228/466 (48%), Gaps = 39/466 (8%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + A K+F+++ V T+I N L +F NMLR + + +
Sbjct: 173 GKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVI 232
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
ACA +G +HG KLG L++ +V SLI Y
Sbjct: 233 TACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFY---------------------- 270
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
+ ++GD +R FDE + +W A++SGY N ++ L +F M
Sbjct: 271 ------ANCKRIGD---SRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNS 321
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
I P++S F S L++C+ +G LD G +H + L + SL+ MY+ GN++ A
Sbjct: 322 ILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAV 381
Query: 293 RLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
+F + + IV WN++I G A HG G A +F +M +L +PD+ITF + +ACS+ G
Sbjct: 382 SVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCG 441
Query: 353 MASEGLKLLDKMFSVYN-MEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETL 411
+G KL M S N ++ K +HY C+VD+L R G +EA +I R+ N +
Sbjct: 442 FLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPN----EM 497
Query: 412 AWRAFLSACCNHGQAQLATLAAESLVRLDNP-SGLYVLISNLYAASGRHADVRRVRDVMK 470
W A LSAC H AA ++ LD+ S YVL+SN+YA++GR ++V ++R MK
Sbjct: 498 VWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMK 557
Query: 471 NKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
+ K PG S V I G EF +G++ P I+ LE + +L
Sbjct: 558 KNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEFLREKL 601
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 185/435 (42%), Gaps = 51/435 (11%)
Query: 38 FALSRVLAFC-SHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNM 96
F R AF SH G + V Q+ V ICN L++ ++ VF +
Sbjct: 7 FQRFRFRAFSISHVIHGKCYRSFSVTVEFQNREVLICN-----HLLSRRIDEAREVFNQV 61
Query: 97 LRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDM 156
P + Y R + L + ++ + + D+ NS+I+ GDM
Sbjct: 62 ------PSPHVSLYTKMITGYTRSNRLVDALNLFDEMP--VRDVVSWNSMISGCVECGDM 113
Query: 157 VAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNN 216
A K+FDE+P S VSW+ M++G + G VD A F + P KD W +M+ GY+Q
Sbjct: 114 NTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFG 173
Query: 217 CFKEGLYLFRLMQLTDI--------GPDES-----------------------IFVSILS 245
+ L LF+ M ++ G D++ F +++
Sbjct: 174 KVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVIT 233
Query: 246 ACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVC 305
ACA+ A G+ VH + + +S SL+ YA C + ++++FD +
Sbjct: 234 ACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAV 293
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMF 365
W A++SG +++ AL +FS M + I P+ TF + +CS G G K + +
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWG-KEMHGVA 352
Query: 366 SVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQ 425
+E + LV + S +G +A+ + +I + ++W + + C HG+
Sbjct: 353 VKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFK-----KSIVSWNSIIVGCAQHGR 407
Query: 426 AQLATLAAESLVRLD 440
+ A + ++RL+
Sbjct: 408 GKWAFVIFGQMIRLN 422
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 231/463 (49%), Gaps = 38/463 (8%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
A K+F I + N I + +G + F R P++ T L AC+
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221
Query: 118 LRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLM 177
+LG +HG + G D+ V N LI Y + ++ +F E+ + +AVS
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVS---- 277
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDE 237
W ++++ YVQN+ ++ L+ + + +
Sbjct: 278 ---------------------------WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 238 SIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDS 297
+ S+LSACA M L+ G +H + +A + +I + ++L+DMY KCG ++ +++ FD
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 298 MPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGI--KPDDITFIAVFTACSYSGMAS 355
MP++++V N++I G A G AL LF EM G P+ +TF+++ +ACS +G
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430
Query: 356 EGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRA 415
G+K+ D M S Y +EP +EHY C+VD+L R G E A I+++ S W A
Sbjct: 431 NGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS----VWGA 486
Query: 416 FLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRV 474
+AC HG+ QL LAAE+L +LD SG +VL+SN +AA+GR A+ VR+ +K +
Sbjct: 487 LQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGI 546
Query: 475 DKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQLD 517
K G S + + V F A +++H EI + L K+ +++
Sbjct: 547 KKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEME 589
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 180/442 (40%), Gaps = 56/442 (12%)
Query: 48 SHPHQGSLTYACKVFQRIQHP-------------TVCICNTIIKAFLINGNLNRTLHVFT 94
S P Y ++ ++ HP V ++I NG+ + L F
Sbjct: 38 SPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFF 97
Query: 95 NMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFG 154
M R G+ P+++T P A KA A+LR G+ IH + K G + D+FVG S MYC
Sbjct: 98 EMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTR 157
Query: 155 DMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQ 214
ARK+FDEIP E++ W A IS V
Sbjct: 158 LRDDARKLFDEIP-------------------------------ERNLETWNAFISNSVT 186
Query: 215 NNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRL 274
+ +E + F + D P+ F + L+AC+ L+ G+ +H + R+ + +
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 275 STSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGI 334
L+D Y KC + ++ +F M ++ V W ++++ + + A L+ K +
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 335 KPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYG-CLVDLLSRTGFFEEA 393
+ D +V +AC +GMA L +V ++ G LVD+ + G E++
Sbjct: 307 ETSDFMISSVLSAC--AGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDS 364
Query: 394 MVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA-TLAAESLVRLDNPSGLYVLISNL 452
+ N + +L + + GQ +A L E R P+ Y+ +L
Sbjct: 365 EQAFDEMPEKNLVTRNSL-----IGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSL 419
Query: 453 YAASGRHADVR---RVRDVMKN 471
+A R V ++ D M++
Sbjct: 420 LSACSRAGAVENGMKIFDSMRS 441
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 8/218 (3%)
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAAR--KVFDEIPSLSAVSWSLMISGYAKVGDVDLAR 191
LGLL N++ A G +V AR K D P ++ +I+ Y+K+ + AR
Sbjct: 9 LGLLLK----NAISASSMRLGRVVHARIVKTLDSPPPPFLANY--LINMYSKLDHPESAR 62
Query: 192 LFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMG 251
L TP ++ W ++ISG QN F L F M+ + P++ F A A +
Sbjct: 63 LVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLR 122
Query: 252 ALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMIS 311
TG +H + L + + S DMY K D A++LFD +P+R++ WNA IS
Sbjct: 123 LPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFIS 182
Query: 312 GLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
G A++ F E ++ P+ ITF A ACS
Sbjct: 183 NSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 124/300 (41%), Gaps = 39/300 (13%)
Query: 23 QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLI 82
Q H V SG D + + ++ F Q + + +F + +++ A++
Sbjct: 230 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQ--IRSSEIIFTEMGTKNAVSWCSLVAAYVQ 287
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFV 142
N + ++ ++ + ++ I L ACA + LG IH ++ K + IFV
Sbjct: 288 NHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFV 347
Query: 143 GNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDK 202
G++L+ MY G + + + FDE+P + V+ + +I GYA G VD+A F+E +
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC 407
Query: 203 GIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRY 262
G P+ FVS+LSAC+ GA++ G+ +
Sbjct: 408 G-----------------------------PTPNYMTFVSLLSACSRAGAVENGM---KI 435
Query: 263 LNRARLPLSIRLSTS----LLDMYAKCGNLDLAKRLFDSMP-DRDIVCWNAMISGLAMHG 317
+ R I ++DM + G ++ A MP I W A+ + MHG
Sbjct: 436 FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 495
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 154/498 (30%), Positives = 247/498 (49%), Gaps = 43/498 (8%)
Query: 23 QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLT-YACKVFQRIQHPTVCICNTIIKAFL 81
+ HA V G D+N + ++ S + +LT Y + F R+ + T+I +
Sbjct: 407 ELHAYVIKHGWDSNLQVGNTLIDMYS---KCNLTCYMGRAFLRMHDKDLISWTTVIAGYA 463
Query: 82 INGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIF 141
N L +F ++ + + D + L+A + L+ + + IH + + GLL D
Sbjct: 464 QNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTV 522
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
+ N L+ +Y +M A +VF+ I VS
Sbjct: 523 IQNELVDVYGKCRNMGYATRVFESIKGKDVVS---------------------------- 554
Query: 202 KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHR 261
W +MIS N E + LFR M T + D + ILSA A + AL+ G +H
Sbjct: 555 ---WTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHC 611
Query: 262 YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG 321
YL R L ++ +++DMYA CG+L AK +FD + + ++ + +MI+ MHG G
Sbjct: 612 YLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKA 671
Query: 322 ALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLV 381
A++LF +M + PD I+F+A+ ACS++G+ EG L M Y +EP EHY CLV
Sbjct: 672 AVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLV 731
Query: 382 DLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD- 440
D+L R EA ++ + W A L+AC +H + ++ +AA+ L+ L+
Sbjct: 732 DMLGRANCVVEAFEFVKMMKTEPTAE----VWCALLAACRSHSEKEIGEIAAQRLLELEP 787
Query: 441 -NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTH 499
NP L VL+SN++A GR DV +VR MK ++K PGCS +E+DG V +F A +K+H
Sbjct: 788 KNPGNL-VLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSH 846
Query: 500 PQMDEIHSILEKMHLQLD 517
P+ EI+ L ++ +L+
Sbjct: 847 PESKEIYEKLSEVTRKLE 864
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 152/341 (44%), Gaps = 34/341 (9%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
L L K + + Q +Q H+++F + L+ L F + GSL A KVF +
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM-YGKCGSLDDAEKVFDEMPDR 145
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
T NT+I A++ NG L ++ NM G+ + P LKACA LRD G +H
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVD 188
KLG F+ N+L++MY AK D+
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMY-------------------------------AKNDDLS 234
Query: 189 LARLFFDETPEK-DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
AR FD EK D +W +++S Y + E L LFR M +T P+ VS L+AC
Sbjct: 235 AARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC 294
Query: 248 AHMGALDTGVWVH-RYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
G +H L + + + +L+ MY +CG + A+R+ M + D+V W
Sbjct: 295 DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTW 354
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTA 347
N++I G + AL+ FS+M G K D+++ ++ A
Sbjct: 355 NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 158/345 (45%), Gaps = 38/345 (11%)
Query: 10 TLLEKCKNMKQLK---QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
LL+ C ++ ++ + H+ + G + F ++ +++ + L+ A ++F Q
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSM--YAKNDDLSAARRLFDGFQ 244
Query: 67 HP-TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGE 125
+ N+I+ ++ +G TL +F M G +P++YTI AL AC LG+
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304
Query: 126 MIHGYSSKLGL-LFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKV 184
IH K +++V N+LIAMY G M A ++ ++ + V+
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVT----------- 353
Query: 185 GDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSIL 244
W ++I GYVQN +KE L F M DE SI+
Sbjct: 354 --------------------WNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSII 393
Query: 245 SACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIV 304
+A + L G+ +H Y+ + ++++ +L+DMY+KC R F M D+D++
Sbjct: 394 AASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLI 453
Query: 305 CWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
W +I+G A + + AL+LF ++ K ++ D++ ++ A S
Sbjct: 454 SWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 166/376 (44%), Gaps = 39/376 (10%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
K+ HA V S ++ + L + G + A ++ +++ + V N++IK ++
Sbjct: 304 KEIHASVLKSSTHSSELYVCNAL-IAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 82 INGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIF 141
N L F++M+ G D ++ + A L + G +H Y K G ++
Sbjct: 363 QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ 422
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
VGN+LI MY + F + +SW+ +I+GYA
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYA------------------- 463
Query: 202 KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHR 261
QN+C E L LFR + + DE I SIL A + + ++ +H
Sbjct: 464 ------------QNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 262 YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG 321
++ R L L + L+D+Y KC N+ A R+F+S+ +D+V W +MIS A++G+
Sbjct: 512 HILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 322 ALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK----LLDKMFSVYNMEPKS--E 375
A++LF M + G+ D + + + +A + ++G + LL K F + + +
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630
Query: 376 HYGCLVDLLSRTGFFE 391
Y C DL S F+
Sbjct: 631 MYACCGDLQSAKAVFD 646
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 133/281 (47%), Gaps = 11/281 (3%)
Query: 181 YAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIF 240
Y K G +D A FDE P++ W MI YV N L L+ M++ + S F
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 241 VSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD 300
++L ACA + + +G +H L + + + +L+ MYAK +L A+RLFD +
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 301 R-DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK 359
+ D V WN+++S + G + L+LF EM G P+ T ++ TAC A G +
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 360 LLDKMFSVYNMEPKSEHYGC--LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFL 417
+ + + SE Y C L+ + +R G +A I+R++ N++ + W + +
Sbjct: 306 IHASVLK--SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNAD-----VVTWNSLI 358
Query: 418 SACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAASGR 458
+ + A ++ + S V ++++ AASGR
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSD-EVSMTSIIAASGR 398
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 34/241 (14%)
Query: 16 KNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNT 75
K+M +K+ H + GL + V + + G YA +VF+ I+ V +
Sbjct: 501 KSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMG---YATRVFESIKGKDVVSWTS 557
Query: 76 IIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLG 135
+I + +NGN + + +F M+ GLS D+ + L A A+L + G IH Y + G
Sbjct: 558 MISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKG 617
Query: 136 LLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFD 195
+ + +++ MY GD+ +A+ VFD I + ++ MI+ Y G
Sbjct: 618 FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHG---------- 667
Query: 196 ETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDT 255
C K + LF M+ ++ PD F+++L AC+H G LD
Sbjct: 668 ---------------------CGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDE 706
Query: 256 G 256
G
Sbjct: 707 G 707
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 106/246 (43%), Gaps = 30/246 (12%)
Query: 225 FRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIR-LSTSLLDMYA 283
F+ + +++ F +L C A+ G +H + + + L+ L+ MY
Sbjct: 68 FQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYG 127
Query: 284 KCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIA 343
KCG+LD A+++FD MPDR WN MI +G+ AL L+ M G+ +F A
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 187
Query: 344 VFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDL-LSRTGFFEEAMVII----- 397
+ AC+ KL D + SE + LV L TGF A+V +
Sbjct: 188 LLKACA---------KLRD-------IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND 231
Query: 398 -----RRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPS-GLYVLISN 451
RR+ + + + W + LS+ G++ L TL + + P+ Y ++S
Sbjct: 232 DLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS-LETLELFREMHMTGPAPNSYTIVSA 290
Query: 452 LYAASG 457
L A G
Sbjct: 291 LTACDG 296
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 150/509 (29%), Positives = 247/509 (48%), Gaps = 49/509 (9%)
Query: 10 TLLEKCKNMKQLKQA---HAQVFTSGLDNNSF---ALSRVLAFCSHPHQGSLTYACKVFQ 63
++L+ C+NMK L H V G++ + + A+ + A CS ++ AC +F+
Sbjct: 116 SVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV----TMEAACLIFR 171
Query: 64 RIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSL 123
I+ T+I F G+ L ++ ML Y I A++A A++ +
Sbjct: 172 DIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTT 231
Query: 124 GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK 183
G+ IH K G ++ V NS++ +YC G + A+ F E+ ++W+ +IS
Sbjct: 232 GKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS---- 287
Query: 184 VGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
E D E L +F+ + P+ F S+
Sbjct: 288 ------------ELERSDS----------------SEALLMFQRFESQGFVPNCYTFTSL 319
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD-RD 302
++ACA++ AL+ G +H + R ++ L+ +L+DMYAKCGN+ ++R+F + D R+
Sbjct: 320 VAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRN 379
Query: 303 IVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLD 362
+V W +M+ G HG G A++LF +M GI+PD I F+AV +AC ++G+ +GLK +
Sbjct: 380 LVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFN 439
Query: 363 KMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCN 422
M S Y + P + Y C+VDLL R G EA ++ R+ + S W A L AC
Sbjct: 440 VMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDES----TWGAILGACKA 495
Query: 423 HGQAQL-ATLAAESLVRLDNP-SGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGC 480
H L + LAA ++ L G YV++S +YAA G+ D RVR +M+ K G
Sbjct: 496 HKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGM 555
Query: 481 SSVEIDGVVMEFIAGEKTHPQMDEIHSIL 509
S + ++ V F +K P ++S+L
Sbjct: 556 SWILVENQVFSFAVSDKMCPNASSVYSVL 584
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 166/378 (43%), Gaps = 38/378 (10%)
Query: 48 SHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYT 107
S+ +G + A +F + V +I + + R F M++ G SP+ +T
Sbjct: 54 SYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFT 113
Query: 108 IPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFG-DMVAARKVFDEI 166
+ LK+C ++ + G ++HG KLG+ ++V N+++ MY M AA +F +I
Sbjct: 114 LSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDI 173
Query: 167 PSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFR 226
+ V+W+ +I+G+ +GD GI GL +++
Sbjct: 174 KVKNDVTWTTLITGFTHLGD----------------GI---------------GGLKMYK 202
Query: 227 LMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCG 286
M L + + A A + ++ TG +H + + ++ + S+LD+Y +CG
Sbjct: 203 QMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCG 262
Query: 287 NLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFT 346
L AK F M D+D++ WN +IS L D AL +F E G P+ TF ++
Sbjct: 263 YLSEAKHYFHEMEDKDLITWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVA 321
Query: 347 ACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNG 406
AC+ + G +L ++F E L+D+ ++ G ++ + I + N
Sbjct: 322 ACANIAALNCGQQLHGRIFR-RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRN- 379
Query: 407 SEETLAWRAFLSACCNHG 424
++W + + +HG
Sbjct: 380 ---LVSWTSMMIGYGSHG 394
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 6/220 (2%)
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPD 236
+I Y + G V+ AR FDE P++D W AMI+GY +N F M P+
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 237 ESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCG-NLDLAKRLF 295
E S+L +C +M L G VH + + + S+ + ++++MYA C ++ A +F
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIF 170
Query: 296 DSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEM--EKLGIKPDDITFIAVFTACSYSGM 353
+ ++ V W +I+G GDGIG LK++ +M E + P IT IAV + S +
Sbjct: 171 RDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT-IAVRASASIDSV 229
Query: 354 ASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEA 393
+ K + + ++DL R G+ EA
Sbjct: 230 TTG--KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEA 267
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 274 LSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLG 333
L+T+L+ Y + G ++ A+ LFD MPDRD+V W AMI+G A A + F EM K G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 334 IKPDDITFIAVFTAC 348
P++ T +V +C
Sbjct: 107 TSPNEFTLSSVLKSC 121
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 230/479 (48%), Gaps = 44/479 (9%)
Query: 12 LEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVC 71
L + +++ K H G N+ + +L + + YA +VF
Sbjct: 215 LGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDV--YAKSKCIIYARRVFDLDFKKNEV 272
Query: 72 ICNTIIKAFLINGNLNRTLHVFTNMLRNG----LSPDNYTIPYALKACAALRDHSLGEMI 127
+ +I ++ N + VF ML N ++P I L CA D S G +
Sbjct: 273 TWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCV 330
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
H Y+ K G + D+ V N++I+ Y +G + A + F
Sbjct: 331 HCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFS----------------------- 367
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
E KD + ++I+G V N +E LF M+ + I PD + + +L+AC
Sbjct: 368 --------EIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC 419
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWN 307
+H+ AL G H Y ++ + +L+DMY KCG LD+AKR+FD+M RDIV WN
Sbjct: 420 SHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWN 479
Query: 308 AMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMF-S 366
M+ G +HG G AL LF+ M++ G+ PD++T +A+ +ACS+SG+ EG +L + M
Sbjct: 480 TMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRG 539
Query: 367 VYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
+N+ P+ +HY C+ DLL+R G+ +EA + ++ + LSAC + A
Sbjct: 540 DFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPF----EPDIRVLGTLLSACWTYKNA 595
Query: 427 QLATLAAESLVRLDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEI 485
+L ++ + L + VL+SN Y+A+ R D R+R + K + + K PG S V++
Sbjct: 596 ELGNEVSKKMQSLGETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 102/180 (56%), Gaps = 3/180 (1%)
Query: 181 YAKVGDVDLARLFFDETPEK--DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDES 238
YA +V+LAR FDE P + W MI Y N+ ++ L L+ M + + P +
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 239 IFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM 298
+ +L ACA + A+D G +H ++N + + + T+L+D YAKCG L++A ++FD M
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 299 PDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKL-GIKPDDITFIAVFTACSYSGMASEG 357
P RD+V WNAMISG ++H + LF +M ++ G+ P+ T + +F A +G EG
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 144/314 (45%), Gaps = 46/314 (14%)
Query: 9 LTLLEKC---KNMKQLKQAHAQVFTSGLDNNS----FALSRVLAFCSHPHQGSLTYACKV 61
L+LLE C +N+ + H + L +S L+R+ A C+ + A V
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNE-----VELARHV 57
Query: 62 FQRIQHPTV--CICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALR 119
F I HP + + +I+A+ N + L ++ ML +G+ P YT P+ LKACA LR
Sbjct: 58 FDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLR 117
Query: 120 DHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMIS 179
G++IH + + D++V +L+ Y G++ A KVFDE+P V+W+
Sbjct: 118 AIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWN---- 173
Query: 180 GYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD-IGPDES 238
AMISG+ + C + + LF M+ D + P+ S
Sbjct: 174 ---------------------------AMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLS 206
Query: 239 IFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM 298
V + A GAL G VH Y R + + T +LD+YAK + A+R+FD
Sbjct: 207 TIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLD 266
Query: 299 PDRDIVCWNAMISG 312
++ V W+AMI G
Sbjct: 267 FKKNEVTWSAMIGG 280
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 21/239 (8%)
Query: 239 IFVSILSACAHMGALDTGVWVHRYLNRARLPLSIR-LSTSLLDMYAKCGNLDLAKRLFDS 297
+F+S+L C L G +H++L + L LS + +L +YA C ++LA+ +FD
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 298 MPDRDI--VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMAS 355
+P I + W+ MI A + AL L+ +M G++P T+ V AC+
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACA------ 114
Query: 356 EGLKLLDKMFSVYN----MEPKSEHYGC--LVDLLSRTGFFEEAMVIIRRITNSNNGSEE 409
GL+ +D +++ + ++ Y C LVD ++ G E A+ + + +
Sbjct: 115 -GLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPK-----RD 168
Query: 410 TLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAASGRHADVRRVRDV 468
+AW A +S H + R+D S I ++ A GR +R + V
Sbjct: 169 MVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAV 227
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 144/491 (29%), Positives = 235/491 (47%), Gaps = 41/491 (8%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
+ H Q+ +G D + + ++ + +Y +V + I + V +I +
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASY--RVLETIPNKDVVCWTVMISGLM 322
Query: 82 INGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIF 141
G + L VF+ ML++G + I + +CA L LG +HGY + G D
Sbjct: 323 RLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTP 382
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
NSLI MY AK G +D + + F+ E+D
Sbjct: 383 ALNSLITMY-------------------------------AKCGHLDKSLVIFERMNERD 411
Query: 202 KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGP-DESIFVSILSACAHMGALDTGVWVH 260
W A+ISGY QN + L LF M+ + D VS+L AC+ GAL G +H
Sbjct: 412 LVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIH 471
Query: 261 RYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGI 320
+ R+ + + T+L+DMY+KCG L+ A+R FDS+ +D+V W +I+G HG G
Sbjct: 472 CIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGD 531
Query: 321 GALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCL 380
AL+++SE G++P+ + F+AV ++CS++GM +GLK+ M + +EP EH C+
Sbjct: 532 IALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACV 591
Query: 381 VDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD 440
VDLL R E+A + N S + L L AC +G+ ++ + E ++ L
Sbjct: 592 VDLLCRAKRIEDAFKFYKE--NFTRPSIDVLG--IILDACRANGKTEVEDIICEDMIELK 647
Query: 441 -NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTH 499
+G YV + + +AA R DV + M++ + K PG S +E++G F +H
Sbjct: 648 PGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Query: 500 PQMDEIHSILE 510
D+ S+L+
Sbjct: 708 S--DDTVSLLK 716
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 193/423 (45%), Gaps = 42/423 (9%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVL-AFCSHPHQGSLTYACKVFQRIQH 67
L +L + QL+ H G D + ++ +L +C H G A +F +++
Sbjct: 151 LEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGD---AKDLFDQMEQ 207
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
+ NT+I + GN++ L + M +GL PD T +L + D +G M+
Sbjct: 208 RDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRML 267
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
H K G D+ + +LI MY G A+ +V + IP+ V W++MISG ++G
Sbjct: 268 HCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRA 327
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
+ A + F E + + I+ S++++C
Sbjct: 328 EKALIVFSEMLQSGSDLSSEAIA-------------------------------SVVASC 356
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWN 307
A +G+ D G VH Y+ R L SL+ MYAKCG+LD + +F+ M +RD+V WN
Sbjct: 357 AQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWN 416
Query: 308 AMISGLAMHGDGIGALKLFSEME-KLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
A+ISG A + D AL LF EM+ K + D T +++ ACS +G G KL+ +
Sbjct: 417 AIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG-KLIHCIVI 475
Query: 367 VYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
+ P S LVD+ S+ G+ E A I+ ++ ++W ++ HG+
Sbjct: 476 RSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSIS-----WKDVVSWGILIAGYGFHGKG 530
Query: 427 QLA 429
+A
Sbjct: 531 DIA 533
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 156/369 (42%), Gaps = 48/369 (13%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
N+ I +G+ + L F++ML N L PD +T P LKACA+L+ S G IH
Sbjct: 15 NSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLV 74
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
G D ++ +SL+ +Y FG + ARKV
Sbjct: 75 NGFSSDFYISSSLVNLYAKFGLLAHARKV------------------------------- 103
Query: 194 FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGAL 253
F+E E+D W AMI Y + E L M+ I P + +LS + L
Sbjct: 104 FEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL 163
Query: 254 DTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGL 313
+H + I + S+L++Y KC ++ AK LFD M RD+V WN MISG
Sbjct: 164 QC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGY 220
Query: 314 AMHGDGIGALKLFSEMEKLGIKPDDITFIAVF----TACSYSGMASEGLKLLDKMFSVYN 369
A G+ LKL M G++PD TF A T C +++ F V +
Sbjct: 221 ASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDV-D 279
Query: 370 MEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
M K+ L+ + + G E + ++ I N ++ + W +S G+A+ A
Sbjct: 280 MHLKT----ALITMYLKCGKEEASYRVLETIPN-----KDVVCWTVMISGLMRLGRAEKA 330
Query: 430 TLAAESLVR 438
+ +++
Sbjct: 331 LIVFSEMLQ 339
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 178/413 (43%), Gaps = 45/413 (10%)
Query: 10 TLLEKCKNMKQLK---QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
+LL+ C ++++L H QV +G ++ + S ++ + G L +A KVF+ ++
Sbjct: 51 SLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNL--YAKFGLLAHARKVFEEMR 108
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
V +I + G + + M G+ P T+ L+ + + + + +
Sbjct: 109 ERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTL---LEMLSGVLEITQLQC 165
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
+H ++ G DI V NS++ +YC K
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYC-------------------------------KCDH 194
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
V A+ FD+ ++D W MISGY E L L M+ + PD+ F + LS
Sbjct: 195 VGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSV 254
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
M L+ G +H + + + + L T+L+ MY KCG + + R+ +++P++D+VCW
Sbjct: 255 SGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCW 314
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
MISGL G AL +FSEM + G +V +C+ G G + +
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
Query: 367 VYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSA 419
+ + L+ + ++ G ++++VI R+ + ++W A +S
Sbjct: 375 -HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNE-----RDLVSWNAIISG 421
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/483 (30%), Positives = 241/483 (49%), Gaps = 20/483 (4%)
Query: 10 TLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPT 69
++L C +++ Q H SG + + + +++ S G A ++F+++ H +
Sbjct: 137 SVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRC--GEWVLAARMFEKVPHKS 194
Query: 70 VCICNTIIKAFLINGNLNRTLHVFTNMLRNGLS--PDNYTIPYALKACAALRDHSLGEMI 127
V N I + NG +N VF N++R S P++ T A+ ACA+L + G +
Sbjct: 195 VVTYNAFISGLMENGVMNLVPSVF-NLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQL 253
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP-SLSAVSWSLMISGYAKVGD 186
HG K F+ VG +LI MY +A VF E+ + + +SW+ +ISG G
Sbjct: 254 HGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQ 313
Query: 187 VDLARLFFD----ETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVS 242
+ A F+ E + D W ++ISG+ Q E F M + P S
Sbjct: 314 HETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTS 373
Query: 243 ILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR- 301
+LSAC+ + L G +H ++ +A I + TSL+DMY KCG A+R+FD +
Sbjct: 374 LLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKP 433
Query: 302 -DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL 360
D V WN MISG HG+ A+++F + + ++P TF AV +ACS+ G +G ++
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQI 493
Query: 361 LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSAC 420
M Y +P +EH GC++DLL R+G EA +I +++ ++ +L L +C
Sbjct: 494 FRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSSL-----LGSC 548
Query: 421 CNHGQAQLATLAAESLVRL--DNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAP 478
H L AA L L +NP+ +V++S++YAA R DV +R V+ K++ K P
Sbjct: 549 RQHLDPVLGEEAAMKLAELEPENPAP-FVILSSIYAALERWEDVESIRQVIDQKQLVKLP 607
Query: 479 GCS 481
G S
Sbjct: 608 GLS 610
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 162/366 (44%), Gaps = 58/366 (15%)
Query: 85 NLNRTLHVFTNMLRNGLS--------PDNYTIPYALKACAALRDHSLGEMIHGYSSKLGL 136
NL R + +N++ G S P+ +T P LK+CA L D G ++H K G
Sbjct: 3 NLTRQRYRVSNLVTGGTSLDVILSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGF 62
Query: 137 LFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDE 196
D+F +L++MY KV V A DE
Sbjct: 63 FVDVFTATALVSMY-------------------------------MKVKQVTDALKVLDE 91
Query: 197 TPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTG 256
PE+ A +SG ++N ++ +F +++ G + S+L C G ++ G
Sbjct: 92 MPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGG 148
Query: 257 VWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMH 316
+ +H ++ + + + TSL+ MY++CG LA R+F+ +P + +V +NA ISGL +
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 317 GDGIGALKLFSEMEKLGI-KPDDITFIAVFTACS-----YSGMASEGLKLLDKMFSVYNM 370
G +F+ M K +P+D+TF+ TAC+ G GL ++ K F M
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGL-VMKKEFQFETM 267
Query: 371 EPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLAT 430
+ L+D+ S+ ++ A ++ + ++ N ++W + +S +GQ + A
Sbjct: 268 VGTA-----LIDMYSKCRCWKSAYIVFTELKDTRN----LISWNSVISGMMINGQHETAV 318
Query: 431 LAAESL 436
E L
Sbjct: 319 ELFEKL 324
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 219/448 (48%), Gaps = 39/448 (8%)
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
+V N I L GN L + + M S D + LKAC+ + LG+ IH
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVD 188
G +A +D I ++ + +I+ Y+K D+
Sbjct: 304 G---------------------------LAIHSSYDGIDNVR----NTLITMYSKCKDLR 332
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
A + F +T E W ++ISGY Q N +E +L R M + P+ SIL CA
Sbjct: 333 HALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCA 392
Query: 249 HMGALDTGVWVHRYLNRAR-LPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWN 307
+ L G H Y+ R + L SL+D+YAK G + AK++ D M RD V +
Sbjct: 393 RIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYT 452
Query: 308 AMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSV 367
++I G G+G AL LF EM + GIKPD +T +AV +ACS+S + EG +L KM
Sbjct: 453 SLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCE 512
Query: 368 YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
Y + P +H+ C+VDL R GF +A II + +G+ W L+AC HG Q
Sbjct: 513 YGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGA----TWATLLNACHIHGNTQ 568
Query: 428 LATLAAESLVRL--DNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEI 485
+ AAE L+ + +NP G YVLI+N+YAA+G + + VR +M++ V K PGC+ ++
Sbjct: 569 IGKWAAEKLLEMKPENP-GYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDT 627
Query: 486 DGVVMEFIAGEKTHPQMDEIHSILEKMH 513
D F G+ + P+ + +L+ ++
Sbjct: 628 DSGFSLFSVGDTSSPEACNTYPLLDGLN 655
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 193/441 (43%), Gaps = 24/441 (5%)
Query: 10 TLLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
+LL C +++ Q HA +SG++ +S + +++ F S + + + I
Sbjct: 48 SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDIL 107
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
HP N +I ++ N + + M+ G+ PD +T P LKAC D + G +
Sbjct: 108 HPLPW--NVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRV 165
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
+HG ++V N+LI+MY F +M AR++FD + AVSW+ +I+ YA G
Sbjct: 166 VHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 187 VDLARLFFDET----PEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVS 242
A FD+ E W + G +Q + L L M+ D +
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII 285
Query: 243 ILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRD 302
L AC+ +GA+ G +H + + +L+ MY+KC +L A +F +
Sbjct: 286 GLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENS 345
Query: 303 IVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK--- 359
+ WN++ISG A A L EM G +P+ IT ++ C+ G +
Sbjct: 346 LCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHC 405
Query: 360 --LLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFL 417
L K F Y M + LVD+ +++G +V +++++ + +E + + + +
Sbjct: 406 YILRRKCFKDYTML-----WNSLVDVYAKSG----KIVAAKQVSDLMSKRDE-VTYTSLI 455
Query: 418 SACCNHGQAQLATLAAESLVR 438
N G+ +A + + R
Sbjct: 456 DGYGNQGEGGVALALFKEMTR 476
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 48/330 (14%)
Query: 32 GLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLH 91
G+DN L + + C L +A VF++ + ++C N+II + H
Sbjct: 313 GIDNVRNTLITMYSKCK-----DLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASH 367
Query: 92 VFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFD-IFVGNSLIAMY 150
+ ML G P++ T+ L CA + + G+ H Y + D + NSL+ +Y
Sbjct: 368 LLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVY 427
Query: 151 CVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMIS 210
G +VAA++V D + V+++ +I GY G+ +A
Sbjct: 428 AKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVA-------------------- 467
Query: 211 GYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPL 270
L LF+ M + I PD V++LSAC+H + G R + +
Sbjct: 468 -----------LALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEG---ERLFMKMQCEY 513
Query: 271 SIRLS----TSLLDMYAKCGNLDLAKRLFDSMPDRDI-VCWNAMISGLAMHGDGIGALKL 325
IR + ++D+Y + G L AK + +MP + W +++ +HG+ +
Sbjct: 514 GIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGN--TQIGK 571
Query: 326 FSEMEKLGIKPDDITFIAVFTACSYSGMAS 355
++ + L +KP++ + V A Y+ S
Sbjct: 572 WAAEKLLEMKPENPGYY-VLIANMYAAAGS 600
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 246/498 (49%), Gaps = 38/498 (7%)
Query: 20 QLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKA 79
+ K H ++ L+ + L+ ++ ++ G + A +VF + ++ NT+I
Sbjct: 79 EAKACHGKIIRIDLEGDVTLLNVLIN--AYSKCGFVELARQVFDGMLERSLVSWNTMIGL 136
Query: 80 FLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFD 139
+ N + L +F M G +TI L AC D + +H S K + +
Sbjct: 137 YTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLN 196
Query: 140 IFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPE 199
++VG +L+ +Y AK G + A F+ +
Sbjct: 197 LYVGTALLDLY-------------------------------AKCGMIKDAVQVFESMQD 225
Query: 200 KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWV 259
K W +M++GYVQN ++E L L+R Q + ++ S++ AC+++ AL G +
Sbjct: 226 KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM 285
Query: 260 HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDG 319
H + ++ ++ +++S +DMYAKCG+L + +F + ++++ WN +ISG A H
Sbjct: 286 HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARP 345
Query: 320 IGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC 379
+ LF +M++ G+ P+++TF ++ + C ++G+ EG + M + Y + P HY C
Sbjct: 346 KEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSC 405
Query: 380 LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRL 439
+VD+L R G EA +I+ I S W + L++C + +LA +AAE L L
Sbjct: 406 MVDILGRAGLLSEAYELIKSIPFDPTAS----IWGSLLASCRVYKNLELAEVAAEKLFEL 461
Query: 440 D-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKT 498
+ +G +VL+SN+YAA+ + ++ + R ++++ V K G S ++I V F GE
Sbjct: 462 EPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESG 521
Query: 499 HPQMDEIHSILEKMHLQL 516
HP++ EI S L+ + ++
Sbjct: 522 HPRIREICSTLDNLVIKF 539
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 134/491 (27%), Positives = 240/491 (48%), Gaps = 41/491 (8%)
Query: 11 LLEKC---KNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH 67
L+E C K+++ +K+ + + ++G + + ++R+L H G + A ++F I
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLM--HVKCGMIIDARRLFDEIPE 186
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
+ +II F+ GN +F M + +T L+A A L +G+ +
Sbjct: 187 RNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQL 246
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
H + KLG++ + FV LI MY +K GD+
Sbjct: 247 HVCALKLGVVDNTFVSCGLIDMY-------------------------------SKCGDI 275
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
+ AR F+ PEK W +I+GY + +E L L M+ + + D+ ++
Sbjct: 276 EDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRIS 335
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWN 307
+ L+ H L R I +T+L+D Y+K G +D A+ +FD +P ++I+ WN
Sbjct: 336 TKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWN 395
Query: 308 AMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSV 367
A++ G A HG G A+KLF +M + P+ +TF+AV +AC+YSG++ +G ++ M V
Sbjct: 396 ALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEV 455
Query: 368 YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
+ ++P++ HY C+++LL R G +EA+ IRR + W A L+AC +
Sbjct: 456 HGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVN----MWAALLNACRMQENLE 511
Query: 428 LATLAAESLVRLDNPS-GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEID 486
L + AE L + G YV++ N+Y + G+ A+ V + +++K + P C+ VE+
Sbjct: 512 LGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVG 571
Query: 487 GVVMEFIAGEK 497
F++G++
Sbjct: 572 DQTHSFLSGDR 582
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 228/468 (48%), Gaps = 38/468 (8%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLS--PDNYTIPY 110
G + A KVF+RI ++ N +I F+ G ++ L F M + PD +T+
Sbjct: 156 GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTS 215
Query: 111 ALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLS 170
LKAC++ G+ IHG+ + G +C PS +
Sbjct: 216 LLKACSSTGMIYAGKQIHGFLVRSGF-------------HC---------------PSSA 247
Query: 171 AVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQL 230
++ SL + Y K G + AR FD+ EK W ++I GY Q F E + LF+ +Q
Sbjct: 248 TITGSL-VDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 231 TDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDL 290
+ D SI+ A L G + + L + S++DMY KCG +D
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDE 366
Query: 291 AKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSY 350
A++ F M +D++ W +I+G HG G ++++F EM + I+PD++ ++AV +ACS+
Sbjct: 367 AEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSH 426
Query: 351 SGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEET 410
SGM EG +L K+ + ++P+ EHY C+VDLL R G +EA +I + N
Sbjct: 427 SGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPN----V 482
Query: 411 LAWRAFLSACCNHGQAQLATLAAESLVRLD--NPSGLYVLISNLYAASGRHADVRRVRDV 468
W+ LS C HG +L + L+R+D NP+ YV++SNLY +G + R++
Sbjct: 483 GIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPAN-YVMMSNLYGQAGYWNEQGNAREL 541
Query: 469 MKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
K + K G S VEI+ V F +GE +HP I L++ +L
Sbjct: 542 GNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRL 589
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 145/296 (48%), Gaps = 38/296 (12%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
A KVF + V + ++ ++NG+L +L +F+ M R G+ P+ +T LKAC
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 118 LRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLM 177
L G IHG+ K+G + VGNSL+ MY G + A KVF I S +SW+ M
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG--P 235
I+G+ G +G+ + L F +MQ +I P
Sbjct: 180 IAGFVHAG-------------------YGS------------KALDTFGMMQEANIKERP 208
Query: 236 DESIFVSILSACAHMGALDTGVWVHRYLNRARL--PLSIRLSTSLLDMYAKCGNLDLAKR 293
DE S+L AC+ G + G +H +L R+ P S ++ SL+D+Y KCG L A++
Sbjct: 209 DEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARK 268
Query: 294 LFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDI---TFIAVFT 346
FD + ++ ++ W+++I G A G+ + A+ LF +++L + D + I VF
Sbjct: 269 AFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFA 324
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 143/317 (45%), Gaps = 39/317 (12%)
Query: 112 LKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSA 171
L+ C G +H Y K G ++ N LI MYC + + A KVFD +P +
Sbjct: 13 LRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNV 72
Query: 172 VSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
VSWS ++SG+ GD+ K L LF M
Sbjct: 73 VSWSALMSGHVLNGDL-------------------------------KGSLSLFSEMGRQ 101
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
I P+E F + L AC + AL+ G+ +H + + + + + SL+DMY+KCG ++ A
Sbjct: 102 GIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEA 161
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIK--PDDITFIAVFTACS 349
+++F + DR ++ WNAMI+G G G AL F M++ IK PD+ T ++ ACS
Sbjct: 162 EKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACS 221
Query: 350 YSGMASEGLKLLDKMF-SVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSE 408
+GM G ++ + S ++ + G LVDL + G+ A +I
Sbjct: 222 STGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT---- 277
Query: 409 ETLAWRAFLSACCNHGQ 425
++W + + G+
Sbjct: 278 -MISWSSLILGYAQEGE 293
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 109/219 (49%), Gaps = 8/219 (3%)
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
VSIL C G D G VH YL ++ L++ S L+DMY KC +A ++FDSMP
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK 359
+R++V W+A++SG ++GD G+L LFSEM + GI P++ TF AC +GL+
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 360 LLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSA 419
+ + E E LVD+ S+ G EA + RRI + + ++W A ++
Sbjct: 129 IHGFCLKI-GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRS-----LISWNAMIAG 182
Query: 420 CCN--HGQAQLATLAAESLVRLDNPSGLYVLISNLYAAS 456
+ +G L T + + L S L A S
Sbjct: 183 FVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACS 221
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 140/453 (30%), Positives = 215/453 (47%), Gaps = 38/453 (8%)
Query: 31 SGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTL 90
SG N VL C G + ++F I P+V N ++ + + +
Sbjct: 344 SGFQPNEVTCISVLGACFR--SGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAI 401
Query: 91 HVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMY 150
F M L PD T+ L +CA LR G+ IHG + + + + + LIA+Y
Sbjct: 402 SNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVY 461
Query: 151 CVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMIS 210
M + +FD D E D W +MIS
Sbjct: 462 SECEKMEISECIFD------------------------------DCINELDIACWNSMIS 491
Query: 211 GYVQNNCFKEGLYLFRLMQLTDI-GPDESIFVSILSACAHMGALDTGVWVHRYLNRARLP 269
G+ N + L LFR M T + P+E+ F ++LS+C+ + +L G H + ++
Sbjct: 492 GFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYV 551
Query: 270 LSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEM 329
+ T+L DMY KCG +D A++ FD++ ++ V WN MI G +G G A+ L+ +M
Sbjct: 552 SDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKM 611
Query: 330 EKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGF 389
G KPD ITF++V TACS+SG+ GL++L M ++ +EP+ +HY C+VD L R G
Sbjct: 612 ISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGR 671
Query: 390 FEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVL 448
E+A ++ + ++ W LS+C HG LA AE L+RLD S YVL
Sbjct: 672 LEDA----EKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVL 727
Query: 449 ISNLYAASGRHADVRRVRDVMKNKRVDKAPGCS 481
+SN Y++ + D ++ +M RV K PG S
Sbjct: 728 LSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 164/378 (43%), Gaps = 47/378 (12%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G L AC+VF + V N +I + G + L V+ M+ +G P +T+ L
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 145
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMV-AARKVFDEIPSLSA 171
AC+ + D G HG + K GL +IFVGN+L++MY G +V +VF+ + +
Sbjct: 146 SACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNE 205
Query: 172 VSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
VS++ A+I G + N E + +FRLM
Sbjct: 206 VSYT-------------------------------AVIGGLARENKVLEAVQMFRLMCEK 234
Query: 232 DIGPDESIFVSILSACAHMGALDT---------GVWVHRYLNRARLPLSIRLSTSLLDMY 282
+ D +ILS A D+ G +H R + L+ SLL++Y
Sbjct: 235 GVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIY 294
Query: 283 AKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFI 342
AK +++ A+ +F MP+ ++V WN MI G +++ + M G +P+++T I
Sbjct: 295 AKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCI 354
Query: 343 AVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITN 402
+V AC SG G ++ + +P + ++ S +EEA+ R++
Sbjct: 355 SVLGACFRSGDVETGRRIFSSI-----PQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQF 409
Query: 403 SNNGSEETLAWRAFLSAC 420
N ++T LS+C
Sbjct: 410 QNLKPDKT-TLSVILSSC 426
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 115/217 (52%), Gaps = 1/217 (0%)
Query: 124 GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK 183
G++IHG+ ++G+ D ++ N L+ +Y GD ARKVFDE+ SW+ ++ K
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 184 VGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
VGD+ A FD PE+D W MIS V+ ++ L +++ M P S+
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNL-DLAKRLFDSMPDRD 302
LSAC+ + G+ H + L +I + +LL MYAKCG + D R+F+S+ +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 303 IVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDI 339
V + A+I GLA + A+++F M + G++ D +
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSV 241
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 135/315 (42%), Gaps = 38/315 (12%)
Query: 10 TLLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
+L C ++ L KQ H V + + NS +S ++A S + ++ C I
Sbjct: 421 VILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEIS-ECIFDDCIN 479
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNG-LSPDNYTIPYALKACAALRDHSLGE 125
+ N++I F N + L +F M + L P+ + L +C+ L G
Sbjct: 480 ELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGR 539
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
HG K G + D FV +L MYC G++ +AR+ FD + + V W+ MI GY G
Sbjct: 540 QFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNG 599
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILS 245
D E + L+R M + PD FVS+L+
Sbjct: 600 RGD-------------------------------EAVGLYRKMISSGEKPDGITFVSVLT 628
Query: 246 ACAHMGALDTGVWVHRYLNRAR-LPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR-DI 303
AC+H G ++TG+ + + R + + ++D + G L+ A++L ++ P +
Sbjct: 629 ACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSS 688
Query: 304 VCWNAMISGLAMHGD 318
V W ++S +HGD
Sbjct: 689 VLWEILLSSCRVHGD 703
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 40/144 (27%)
Query: 255 TGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM---------------- 298
+G +H ++ R + L LLD+Y +CG+ D A+++FD M
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 299 ---------------PDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIA 343
P+RD+V WN MIS L G AL ++ M G P T +
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 344 VFTACSYSGMASEGLKLLDKMFSV 367
V +ACS K+LD +F +
Sbjct: 144 VLSACS---------KVLDGVFGM 158
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 1 MSSCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSF---ALSRVLAFCSHPHQGSLTY 57
+SSCS+ C L +Q H V SG ++SF AL+ + C G +
Sbjct: 526 LSSCSRLCSLL--------HGRQFHGLVVKSGYVSDSFVETALTDMYCKC-----GEIDS 572
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACA- 116
A + F + I N +I + NG + + ++ M+ +G PD T L AC+
Sbjct: 573 ARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSH 632
Query: 117 ------ALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP-SL 169
L S + IHG +L D ++ ++ G + A K+ + P
Sbjct: 633 SGLVETGLEILSSMQRIHGIEPEL----DHYI--CIVDCLGRAGRLEDAEKLAEATPYKS 686
Query: 170 SAVSWSLMISGYAKVGDVDLAR 191
S+V W +++S GDV LAR
Sbjct: 687 SSVLWEILLSSCRVHGDVSLAR 708
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
A KVF I V +I F+ F +L G+ P+ +T + +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 118 LRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLM 177
RD LG+ +H Y+ K+GL ++FVG++++ Y + AR+ FD+ + VS + +
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLF-RLMQLTDIGPD 236
ISGY K + + A F PE+ W A+I G+ Q +E + F +++ + P+
Sbjct: 166 ISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPN 225
Query: 237 ESIFVSILSACAHMGALDTGVWVH----RYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
ES F ++A +++ + G +H ++L + ++ + SL+ Y+KCGN++ +
Sbjct: 226 ESTFPCAITAISNIASHGAGKSIHACAIKFLGKR---FNVFVWNSLISFYSKCGNMEDSL 282
Query: 293 RLFDSMPD--RDIVCWNAMISGLAMHGDGIGALKLFSEMEK-LGIKPDDITFIAVFTACS 349
F+ + + R+IV WN+MI G A +G G A+ +F +M K ++P+++T + V AC+
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 350 YSGMASEGLKLLDKMFSVYNMEP---KSEHYGCLVDLLSRTGFFEEAMVIIRRIT-NSNN 405
++G+ EG +K + Y+ +P + EHY C+VD+LSR+G F+EA +I+ + +
Sbjct: 343 HAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 401
Query: 406 GSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGL--YVLISNLYAASGRHADVR 463
G W+A L C H +LA LAA ++ LD P + YV++SN Y+A +V
Sbjct: 402 G-----FWKALLGGCQIHSNKRLAKLAASKILELD-PRDVSSYVMLSNAYSAMENWQNVS 455
Query: 464 RVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSIL 509
+R MK + + GCS +E+ + F+ +K + DE++ +L
Sbjct: 456 LIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 246/549 (44%), Gaps = 53/549 (9%)
Query: 11 LLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH 67
+L C+ + + + H QV GL N ++ +L +P G + A +F +
Sbjct: 164 ILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTL--YPKAGRMGDAYNLFVEMPV 221
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALK-------------- 113
N +IK F + + +F M R PD T L
Sbjct: 222 RNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKY 281
Query: 114 ---------------------ACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCV 152
CA L S+ E +HGY K G + N+LI +Y
Sbjct: 282 FHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGK 341
Query: 153 FGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKG--------I 204
G + A +F +I + SW+ +I+ + G +D A F E E +
Sbjct: 342 QGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVT 401
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLN 264
W ++I G + L FR MQ + + + ILS CA + AL+ G +H ++
Sbjct: 402 WTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVI 461
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALK 324
R + +I + +L++MYAKCG L +F+++ D+D++ WN++I G MHG AL
Sbjct: 462 RTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALS 521
Query: 325 LFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLL 384
+F M G PD I +AV +ACS++G+ +G ++ M + +EP+ EHY C+VDLL
Sbjct: 522 MFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLL 581
Query: 385 SRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPS 443
R GF +EA I++ + + A L++C H +A A L L+ +
Sbjct: 582 GRVGFLKEASEIVKNMPM----EPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERT 637
Query: 444 GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMD 503
G Y+L+SN+Y+A GR + VR + K K + K G S +E+ +F +G + +
Sbjct: 638 GSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFE 697
Query: 504 EIHSILEKM 512
I+ +LE +
Sbjct: 698 TIYPVLEDL 706
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 174/365 (47%), Gaps = 12/365 (3%)
Query: 11 LLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTV 70
LL C +Q +Q HAQV S S +L+ L + G L A VF+ + +
Sbjct: 62 LLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANL-ISVYARLGLLLDARNVFETVSLVLL 120
Query: 71 C---ICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
+ N+I+KA + +G L ++ M + GL+ D Y +P L+AC L L
Sbjct: 121 SDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAF 180
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
H ++GL ++ V N L+ +Y G M A +F E+P + +SW++MI G+++ D
Sbjct: 181 HTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDC 240
Query: 188 DLARLFFD----ETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
+ A F+ E + D+ W +++S + Q F++ L F LM+++
Sbjct: 241 ESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVF 300
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI 303
S CA + AL VH Y+ + + +L+ +Y K G + A+ LF + ++ I
Sbjct: 301 FSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGI 360
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEKL----GIKPDDITFIAVFTACSYSGMASEGLK 359
WN++I+ G AL LFSE+E++ +K + +T+ +V C+ G + L+
Sbjct: 361 ESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLE 420
Query: 360 LLDKM 364
+M
Sbjct: 421 YFRQM 425
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 6/230 (2%)
Query: 138 FDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDET 197
FD +G L A C V A+ + + S + +IS YA++G + AR F+
Sbjct: 59 FDHLLGLCLTAQQC---RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETV 115
Query: 198 PE---KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALD 254
D +W +++ V + ++ L L+R M+ + D I IL AC ++G
Sbjct: 116 SLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFG 175
Query: 255 TGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLA 314
H + + L ++ + LL +Y K G + A LF MP R+ + WN MI G +
Sbjct: 176 LCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFS 235
Query: 315 MHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKM 364
D A+K+F M++ KPD++T+ +V + S G + LK M
Sbjct: 236 QEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 248/498 (49%), Gaps = 55/498 (11%)
Query: 7 RCLTLLEK-CKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACK--VFQ 63
R L+LL++ K + Q KQ HAQ+ +G +NS + +CS P S + VF
Sbjct: 9 RFLSLLQQNSKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFP 68
Query: 64 RIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNG--LSPDNYTIPYALKACAALRDH 121
R HP + NT++K ++ +F N L + T + L ACA
Sbjct: 69 RFGHPDKFLFNTLLKC----SKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASS 124
Query: 122 S---LGEMIHGYSSKLGLLFDI-FVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLM 177
S +G ++HG KLG L++ +G +L+ Y GD+ ARKVFDE+P ++V+W+ M
Sbjct: 125 SALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAM 184
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG--P 235
I GY KDKG N+ ++ + LFR G P
Sbjct: 185 IGGYCS---------------HKDKG-----------NHNARKAMVLFRRFSCCGSGVRP 218
Query: 236 DESIFVSILSACAHMGALDTGVWVHRYLNRARL--PLSIRLSTSLLDMYAKCGNLDLAKR 293
++ V +LSA + G L+ G VH Y+ + + + + T+L+DMY+KCG L+ A
Sbjct: 219 TDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFS 278
Query: 294 LFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGM 353
+F+ M +++ W +M +GLA++G G L + M + GIKP++ITF ++ +A + G+
Sbjct: 279 VFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGL 338
Query: 354 ASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAW 413
EG++L M + + + P EHYGC+VDLL + G +EA I + + +
Sbjct: 339 VEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPI----KPDAILL 394
Query: 414 RAFLSACCNHGQAQLATLAAESLVRLDNP----SGL----YVLISNLYAASGRHADVRRV 465
R+ +AC +G+ + ++L+ ++ SG YV +SN+ A G+ +V ++
Sbjct: 395 RSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKL 454
Query: 466 RDVMKNKRVDKAPGCSSV 483
R MK +R+ PG S V
Sbjct: 455 RKEMKERRIKTRPGYSFV 472
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 221/454 (48%), Gaps = 43/454 (9%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ---HPTVCICNTIIK 78
KQ H V SGL+++ FA+S ++ S+ GSL YA VF + + + +V + N+++
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYSNC--GSLIYAADVFHQEKLAVNSSVAVWNSMLS 315
Query: 79 AFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLF 138
FLIN L + + ++ L D+YT+ ALK C + LG +H G
Sbjct: 316 GFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL 375
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
D VG S+++ +A VG++ A F P
Sbjct: 376 DYIVG-------------------------------SILVDLHANVGNIQDAHKLFHRLP 404
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVW 258
KD + +I G V++ YLFR + + D+ I +IL C+ + +L G
Sbjct: 405 NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQ 464
Query: 259 VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGD 318
+H + +T+L+DMY KCG +D LFD M +RD+V W +I G +G
Sbjct: 465 IHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGR 524
Query: 319 GIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYG 378
A + F +M +GI+P+ +TF+ + +AC +SG+ E L+ M S Y +EP EHY
Sbjct: 525 VEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYY 584
Query: 379 CLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVR 438
C+VDLL + G F+EA +I ++ + + W + L+AC H A L T+ AE L++
Sbjct: 585 CVVDLLGQAGLFQEANELINKMPLEPDKT----IWTSLLTACGTHKNAGLVTVIAEKLLK 640
Query: 439 --LDNPSGLYVLISNLYAASGRHADVRRVRDVMK 470
D+PS +Y +SN YA G + +VR+ K
Sbjct: 641 GFPDDPS-VYTSLSNAYATLGMWDQLSKVREAAK 673
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 188/430 (43%), Gaps = 13/430 (3%)
Query: 14 KCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCIC 73
K + K+ + A V G+ N F + V++ + L+ A KVF + +
Sbjct: 17 KVQAFKRGESIQAHVIKQGISQNVFIANNVISM--YVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDN-YTIPYALKACAALRDHSLGEMIHGYSS 132
T++ + +G N+ + ++ ML + N + LKAC + D LG +++
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 133 KLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARL 192
K L D+ + NS++ MY G ++ A F EI S+ SW+ +ISGY K G +D A
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 193 FFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGA 252
F P+ + W +ISG+V + +L R MQ + D L AC+ G
Sbjct: 195 LFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVR-MQREGLVLDGFALPCGLKACSFGGL 253
Query: 253 LDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP---DRDIVCWNAM 309
L G +H + ++ L S ++L+DMY+ CG+L A +F + + WN+M
Sbjct: 254 LTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSM 313
Query: 310 ISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYN 369
+SG ++ + AL L ++ + + D T C GL+ + + V
Sbjct: 314 LSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ-VHSLVVVSG 372
Query: 370 MEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
E LVDL + G ++A + R+ N ++ +A+ + C G LA
Sbjct: 373 YELDYIVGSILVDLHANVGNIQDAHKLFHRLPN-----KDIIAFSGLIRGCVKSGFNSLA 427
Query: 430 TLAAESLVRL 439
L++L
Sbjct: 428 FYLFRELIKL 437
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 160/378 (42%), Gaps = 37/378 (9%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + A +F R+ P V N +I F+ G+ R L M R GL D + +P L
Sbjct: 187 GLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGL 245
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
KAC+ ++G+ +H K GL F ++LI MY G ++ A VF + AV
Sbjct: 246 KACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQ--EKLAV 303
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
+ S+ +W +M+SG++ N + L+L + +D
Sbjct: 304 NSSV--------------------------AVWNSMLSGFLINEENEAALWLLLQIYQSD 337
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
+ D L C + L G+ VH + + L + + L+D++A GN+ A
Sbjct: 338 LCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAH 397
Query: 293 RLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
+LF +P++DI+ ++ +I G G A LF E+ KLG+ D + C S
Sbjct: 398 KLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVC--SS 455
Query: 353 MASEGL-KLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETL 411
+AS G K + + E + LVD+ + G + +V+ + + +
Sbjct: 456 LASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGML-----ERDVV 510
Query: 412 AWRAFLSACCNHGQAQLA 429
+W + +G+ + A
Sbjct: 511 SWTGIIVGFGQNGRVEEA 528
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 62/284 (21%)
Query: 108 IPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP 167
I L+ C ++ GE I + K G+ ++F+ N++I+MY F + A KVFDE+
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 168 SLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRL 227
+ V+W+ M+SGY D P K ++ R+
Sbjct: 68 ERNIVTWTTMVSGYTS-----------DGKPNKAIELYR-------------------RM 97
Query: 228 MQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGN 287
+ + +E ++ ++L AC +G + G+ V+ + + L + L S++DMY K G
Sbjct: 98 LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGR 157
Query: 288 L-------------------------------DLAKRLFDSMPDRDIVCWNAMISGLAMH 316
L D A LF MP ++V WN +ISG
Sbjct: 158 LIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDK 217
Query: 317 GDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL 360
G AL+ M++ G+ D ACS+ G+ + G +L
Sbjct: 218 GSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQL 260
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 143/347 (41%), Gaps = 39/347 (11%)
Query: 12 LEKCKNMKQLK---QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
L+ C N L+ Q H+ V SG + + S ++ H + G++ A K+F R+ +
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDL--HANVGNIQDAHKLFHRLPNK 406
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
+ + +I+ + +G + ++F +++ GL D + + LK C++L G+ IH
Sbjct: 407 DIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIH 466
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVD 188
G K G + +L+ MY G++ +FD + VSW+ +I G+ + G V+
Sbjct: 467 GLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVE 526
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
E F M I P++ F+ +LSAC
Sbjct: 527 -------------------------------EAFRYFHKMINIGIEPNKVTFLGLLSACR 555
Query: 249 HMGALDTGVWVHRYL-NRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP-DRDIVCW 306
H G L+ + + L + ++D+ + G A L + MP + D W
Sbjct: 556 HSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIW 615
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGM 353
++++ H + G + + +E G D + ++ A + GM
Sbjct: 616 TSLLTACGTHKNA-GLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGM 661
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 94/236 (39%), Gaps = 40/236 (16%)
Query: 236 DESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLF 295
D + + L C + A G + ++ + + ++ ++ +++ MY L A ++F
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 296 DSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEM-EKLGIKPDDITFIAVFTACSYSGMA 354
D M +R+IV W M+SG G A++L+ M + ++ + AV AC G
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 355 SEGLKLLDK------------MFSVYNM------------------EPKSEHYGCLVDLL 384
G+ + ++ M SV +M P S + L+
Sbjct: 124 QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Query: 385 SRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD 440
+ G +EA+ + R+ N ++W +S + G + A E LVR+
Sbjct: 184 CKAGLMDEAVTLFHRMPQPN-----VVSWNCLISGFVDKGSPR----ALEFLVRMQ 230
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 222/462 (48%), Gaps = 37/462 (8%)
Query: 25 HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLING 84
H +GLD + + ++ + G++ A KVF I + ++K +L
Sbjct: 132 HGLAMKNGLDKDDYVAPSLVEM--YAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 85 NLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGN 144
+F M GL+ D T+ +KAC + +G+ +HG S +
Sbjct: 190 KDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIR----------- 238
Query: 145 SLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGI 204
R D+ L A +I Y K +D AR F+ + +++ +
Sbjct: 239 ---------------RSFIDQSDYLQAS----IIDMYVKCRLLDNARKLFETSVDRNVVM 279
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLN 264
W +ISG+ + E LFR M I P++ +IL +C+ +G+L G VH Y+
Sbjct: 280 WTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMI 339
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALK 324
R + + TS +DMYA+CGN+ +A+ +FD MP+R+++ W++MI+ ++G AL
Sbjct: 340 RNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALD 399
Query: 325 LFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLL 384
F +M+ + P+ +TF+++ +ACS+SG EG K + M Y + P+ EHY C+VDLL
Sbjct: 400 CFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLL 459
Query: 385 SRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPS 443
R G EA I + S AW A LSAC H + LA AE L+ ++ S
Sbjct: 460 GRAGEIGEAKSFIDNMPVKPMAS----AWGALLSACRIHKEVDLAGEIAEKLLSMEPEKS 515
Query: 444 GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEI 485
+YVL+SN+YA +G V VR M K K G S+ E+
Sbjct: 516 SVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 137/546 (25%), Positives = 232/546 (42%), Gaps = 91/546 (16%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRI--- 65
LT+L + K + +Q HA+V G ++ S + ++ L +A F RI
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTN--AYIQSNRLDFATSSFNRIPCW 68
Query: 66 ---QHPTVCICNTIIKAFLINGN--LNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRD 120
+H NTI+ + + + L ++ M R+ D++ + +A+KAC L
Sbjct: 69 KRNRHSW----NTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGL 124
Query: 121 HSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISG 180
G +IHG + K GL D +V SL+ MY G M +A+KVFDEIP ++V W +++ G
Sbjct: 125 LENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKG 184
Query: 181 YAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIF 240
Y K + + PE F+ LF LM+ T + D
Sbjct: 185 YLK----------YSKDPE-----------------VFR----LFCLMRDTGLALDALTL 213
Query: 241 VSILSACAHMGALDTGVWVHRY-LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
+ ++ AC ++ A G VH + R+ + S L S++DMY KC LD A++LF++
Sbjct: 214 ICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSV 273
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK 359
DR++V W +ISG A + A LF +M + I P+ T A+ +CS G G
Sbjct: 274 DRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKS 333
Query: 360 LLDKMF----------------------------SVYNMEPKSE--HYGCLVDLLSRTGF 389
+ M +V++M P+ + +++ G
Sbjct: 334 VHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGL 393
Query: 390 FEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVR---LDNPSGLY 446
FEEA+ ++ S N ++ + + LSAC + G + ES+ R + Y
Sbjct: 394 FEEALDCFHKM-KSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHY 452
Query: 447 VLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIH 506
+ +L +G + + D M K + A G ++ + H ++D
Sbjct: 453 ACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGA-----------LLSACRIHKEVDLAG 501
Query: 507 SILEKM 512
I EK+
Sbjct: 502 EIAEKL 507
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/473 (29%), Positives = 230/473 (48%), Gaps = 49/473 (10%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G L VF ++ V T +I+ N + + +F NM +G+ P+ T +
Sbjct: 325 GVLEAVKSVFHQMSERNVVSWTT-----MISSNKDDAVSIFLNMRFDGVYPNEVTFVGLI 379
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
A G IHG K G + + VGNS I +Y F + A+K F++I +
Sbjct: 380 NAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREII 439
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
S W AMISG+ QN E L +F L +
Sbjct: 440 S-------------------------------WNAMISGFAQNGFSHEALKMF-LSAAAE 467
Query: 233 IGPDESIFVSILSACAHMG--ALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDL 290
P+E F S+L+A A ++ G H +L + L +S++LLDMYAK GN+D
Sbjct: 468 TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDE 527
Query: 291 AKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSY 350
++++F+ M ++ W ++IS + HGD + LF +M K + PD +TF++V TAC+
Sbjct: 528 SEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNR 587
Query: 351 SGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEET 410
GM +G ++ + M VYN+EP EHY C+VD+L R G +EA ++ + G E+
Sbjct: 588 KGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP---GGPGES 644
Query: 411 LAWRAFLSACCNHGQAQLATLAAESLVRLDNP-SGLYVLISNLYAASGRHADVRRVRDVM 469
+ ++ L +C HG ++ AE + + SG YV + N+YA +R M
Sbjct: 645 M-LQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAM 703
Query: 470 KNKRVDKAPGCSSVEI----DGVVME-FIAGEKTHPQMDEIHSILEKMHLQLD 517
+ K V K G S +++ + M+ F +G+K+HP+ DEI+ ++E + L+++
Sbjct: 704 RKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMN 756
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 169/436 (38%), Gaps = 55/436 (12%)
Query: 8 CLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH 67
CL L ++K+ Q H TSG SF + G A +F+ +
Sbjct: 82 CLALKACRGDLKRGCQIHGFSTTSGF--TSFVCVSNAVMGMYRKAGRFDNALCIFENLVD 139
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
P V NTI+ F N L+ M G+ D +T AL C LG +
Sbjct: 140 PDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQL 196
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
K GL D+ VGNS I MY G AR+V
Sbjct: 197 QSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRV------------------------- 231
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFK-EGLYLFRLMQLTDIGPDESIFVSILSA 246
FDE KD W +++SG Q F E + +FR M + D F S+++
Sbjct: 232 ------FDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITT 285
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
C H L +H + + + L+ Y+KCG L+ K +F M +R++V W
Sbjct: 286 CCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSW 345
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
MIS + A+ +F M G+ P+++TF+ + A + EGLK+
Sbjct: 346 TTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIK 400
Query: 367 V-YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQ 425
+ EP + + L ++ E+A IT E ++W A +S +G
Sbjct: 401 TGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDIT-----FREIISWNAMISGFAQNGF 453
Query: 426 AQLA-----TLAAESL 436
+ A + AAE++
Sbjct: 454 SHEALKMFLSAAAETM 469
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 101/235 (42%), Gaps = 25/235 (10%)
Query: 209 ISGYVQNNCFKEGLYLFRL-MQLTDIGP--DESIFVSILSACAHMGALDTGVWVHRYLNR 265
IS ++ N L +F+ +QL G DE L AC G L G +H +
Sbjct: 47 ISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGFSTT 104
Query: 266 ARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKL 325
+ + +S +++ MY K G D A +F+++ D D+V WN ++SG D AL
Sbjct: 105 SGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNF 161
Query: 326 FSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL---LDKMFSVYNMEPKSEHYGCLVD 382
M+ G+ D T+ + C + SEG L L +E +
Sbjct: 162 VVRMKSAGVVFDAFTYSTALSFC----VGSEGFLLGLQLQSTVVKTGLESDLVVGNSFIT 217
Query: 383 LLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLV 437
+ SR+G F A RR+ + + ++ ++W + LS G +Q T E++V
Sbjct: 218 MYSRSGSFRGA----RRVFDEMS-FKDMISWNSLLS-----GLSQEGTFGFEAVV 262
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/469 (29%), Positives = 236/469 (50%), Gaps = 45/469 (9%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLR-NGLSPDNYTIPYA 111
G + A VF RI +P + N+II NG + + ++ +LR + PD YT A
Sbjct: 349 GDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAA 408
Query: 112 LKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSA 171
+ A A G+++HG +KLG +FVG +L++MY + +A+KVFD +
Sbjct: 409 ISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDV 468
Query: 172 VSWSLMISGYAKVGDVDLARLFFDET-PEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQL 230
V W+ MI G++++G+ +LA FF E EK++ +G L
Sbjct: 469 VLWTEMIVGHSRLGNSELAVQFFIEMYREKNRS----------------DGFSL------ 506
Query: 231 TDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDL 290
S++ AC+ M L G H R + + +L+DMY K G +
Sbjct: 507 ----------SSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYET 556
Query: 291 AKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSY 350
A+ +F + D+ CWN+M+ + HG AL F ++ + G PD +T++++ ACS+
Sbjct: 557 AETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSH 616
Query: 351 SGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEET 410
G +G L ++M ++ +HY C+V+L+S+ G +EA+ +I + NN +E
Sbjct: 617 RGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAE-- 673
Query: 411 LAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADVRRVRDVM 469
WR LSAC N Q+ AAE +++LD + ++L+SNLYA +GR DV +R +
Sbjct: 674 -LWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKI 732
Query: 470 KNKRVDKAPGCSSVEIDGVVME-FIAGEKTHPQM-----DEIHSILEKM 512
+ K PG S +E++ + F +G++++P++ DE++ + M
Sbjct: 733 RGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVVSQAQDELNRLKRNM 781
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 178/413 (43%), Gaps = 54/413 (13%)
Query: 25 HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLING 84
++Q+ G +N + VL S G L A ++F + + NT+I L N
Sbjct: 222 NSQIIKLGYSDNVVVQTSVLGMYSSC--GDLESARRIFDCVNNRDAVAWNTMIVGSLKND 279
Query: 85 NLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGN 144
+ L F NML +G+ P +T L C+ L +SLG++IH L D+ + N
Sbjct: 280 KIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDN 339
Query: 145 SLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGI 204
+L+ MYC GDM A VF I + + VSW+ +ISG ++ G + A L +
Sbjct: 340 ALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYR--------- 390
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLN 264
RL++++ PDE F + +SA A G +H +
Sbjct: 391 ---------------------RLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVT 429
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALK 324
+ S+ + T+LL MY K + A+++FD M +RD+V W MI G + G+ A++
Sbjct: 430 KLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQ 489
Query: 325 LFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL--------LDKMFSVYNMEPKSEH 376
F EM + + D + +V ACS M +G D + SV
Sbjct: 490 FFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSV--------- 540
Query: 377 YGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
G LVD+ + G +E A I +N + W + L A HG + A
Sbjct: 541 CGALVDMYGKNGKYETAETIFSLASNP-----DLKCWNSMLGAYSQHGMVEKA 588
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 165/349 (47%), Gaps = 41/349 (11%)
Query: 9 LTLLEKCKN---MKQLKQAHAQVFTSGL---DNNSFALSRVLAFCSHPHQGSLTYACKVF 62
+ L KC + +K+ +Q HA V T+G + +A + +++ + GSL A KVF
Sbjct: 98 VELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM--YVRCGSLEQARKVF 155
Query: 63 QRIQHPTVCICNTIIKAFLINGNL-NRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDH 121
++ H V N + A+ N + + + T+M + P++ T ++ CA L D
Sbjct: 156 DKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDV 215
Query: 122 SLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGY 181
+G ++ KLG ++ V S++ MY
Sbjct: 216 LMGSSLNSQIIKLGYSDNVVVQTSVLGMY------------------------------- 244
Query: 182 AKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFV 241
+ GD++ AR FD +D W MI G ++N+ ++GL FR M ++ + P + +
Sbjct: 245 SSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYS 304
Query: 242 SILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR 301
+L+ C+ +G+ G +H + + + L +LLDMY CG++ A +F + +
Sbjct: 305 IVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNP 364
Query: 302 DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGI-KPDDITFIAVFTACS 349
++V WN++ISG + +G G A+ ++ + ++ +PD+ TF A +A +
Sbjct: 365 NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATA 413
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 177 MISGYAKVGDVDLARLFFDETPEKD-KGIWG-AMISGYV------QNNCFKEGLY-LFRL 227
+IS Y + ++ AR FD+ P+++ ++G + + YV + K G + +
Sbjct: 28 LISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFF 87
Query: 228 MQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRA---RLPLSIRLSTSLLDMYAK 284
M L +I S V + C + L +H + A S + +L+ MY +
Sbjct: 88 MPLNEIA---SSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 285 CGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG-ALKLFSEMEKLGIKPDDITFIA 343
CG+L+ A+++FD MP R++V +NA+ S + + D A L + M +KP+ TF +
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 344 VFTACS 349
+ C+
Sbjct: 205 LVQVCA 210
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/499 (29%), Positives = 237/499 (47%), Gaps = 43/499 (8%)
Query: 25 HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLING 84
H G +++F ++ ++ S+ + A K+F + P V ++I + G
Sbjct: 52 HTLTLKLGFASDTFTVNHLV--ISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 85 NLNRTLHVFTNMLRN-GLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVG 143
L +F M + + P+ YT KAC+AL + +G+ IH GL +I V
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVS 169
Query: 144 NSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKG 203
+SL+ MY K DV+ AR FD +
Sbjct: 170 SSLVDMY-------------------------------GKCNDVETARRVFDSMIGYGRN 198
Query: 204 I--WGAMISGYVQNNCFKEGLYLFRLMQ--LTDIGPDESIFVSILSACAHMGALDTGVWV 259
+ W +MI+ Y QN E + LFR LT ++ + S++SAC+ +G L G
Sbjct: 199 VVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVA 258
Query: 260 HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDG 319
H + R + ++TSLLDMYAKCG+L A+++F + ++ + +MI A HG G
Sbjct: 259 HGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLG 318
Query: 320 IGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC 379
A+KLF EM I P+ +T + V ACS+SG+ +EGL+ L M Y + P S HY C
Sbjct: 319 EAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTC 378
Query: 380 LVDLLSRTGFFEEAMVIIRRITNSNNGSEE-TLAWRAFLSACCNHGQAQLATLAAESLVR 438
+VD+L R G +EA + + I G+E+ L W A LSA HG+ ++ + A++ L++
Sbjct: 379 VVDMLGRFGRVDEAYELAKTI---EVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQ 435
Query: 439 LDNP-SGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEK 497
+ + Y+ +SN YA SG D +R MK K CS +E V F AG+
Sbjct: 436 SNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDL 495
Query: 498 THPQMDEIHSILEKMHLQL 516
+ + EI L+ + ++
Sbjct: 496 SCDESGEIERFLKDLEKRM 514
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 137/316 (43%), Gaps = 40/316 (12%)
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
++H + KLG D F N L+ Y ++ ARK+FDE+ + VSW+ +ISGY +G
Sbjct: 50 LLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILS 245
A F + E + P+E F S+
Sbjct: 110 KPQNALSMFQKMHED------------------------------RPVPPNEYTFASVFK 139
Query: 246 ACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP--DRDI 303
AC+ + G +H L + L +I +S+SL+DMY KC +++ A+R+FDSM R++
Sbjct: 140 ACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNV 199
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEK--LGIKPDDITFIAVFTACSYSGMASEGLKLL 361
V W +MI+ A + G A++LF + + +V +ACS G G K+
Sbjct: 200 VSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWG-KVA 258
Query: 362 DKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACC 421
+ + E + L+D+ ++ G A I RI +++ + + A
Sbjct: 259 HGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIR-----CHSVISYTSMIMAKA 313
Query: 422 NHGQAQLATLAAESLV 437
HG + A + +V
Sbjct: 314 KHGLGEAAVKLFDEMV 329
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 152/478 (31%), Positives = 227/478 (47%), Gaps = 46/478 (9%)
Query: 25 HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLING 84
HA + TSG+ + ++++ F + G + A KVF + + C +I A NG
Sbjct: 39 HAHLVTSGIARLTRIAAKLVTF--YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNG 96
Query: 85 NLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGN 144
+L F M ++GL D + +P LKA L D G+MIH K D F+ +
Sbjct: 97 YYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVS 156
Query: 145 SLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK----------VGDVDLARLFF 194
SLI MY FG++ ARKVF ++ V ++ MISGYA V D+ L +
Sbjct: 157 SLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKP 216
Query: 195 D--------------ETPEKDKGI---------------WGAMISGYVQNNCFKEGLYLF 225
D EK I W ++ISG V N ++ F
Sbjct: 217 DVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAF 276
Query: 226 RLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKC 285
+ M + P+ + +++L AC + + G +H Y L + ++LLDMY KC
Sbjct: 277 KQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKC 336
Query: 286 GNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVF 345
G + A LF P + V +N+MI A HG A++LF +ME G K D +TF A+
Sbjct: 337 GFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAIL 396
Query: 346 TACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNN 405
TACS++G+ G L M + Y + P+ EHY C+VDLL R G EA +I+ +
Sbjct: 397 TACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM----R 452
Query: 406 GSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYAASGRHADV 462
+ W A L+AC NHG +LA +AA+ L L+ SG +L+++LYA +G V
Sbjct: 453 MEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 124 GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK 183
G ++H + G+ + L+ Y G ++ ARKVFDE+P ISG
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRD-------ISGCV- 86
Query: 184 VGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
MI +N ++E L FR M + D I S+
Sbjct: 87 -----------------------VMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSL 123
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI 303
L A ++ + G +H + + + +SL+DMY+K G + A+++F + ++D+
Sbjct: 124 LKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDL 183
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSY 350
V +NAMISG A + AL L +M+ LGIKPD IT+ A+ + S+
Sbjct: 184 VVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 6/174 (3%)
Query: 256 GVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAM 315
G +H +L + + R++ L+ Y +CG + A+++FD MP RDI MI A
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 316 HGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSE 375
+G +L F EM K G+K D ++ A S + + E K++ + ++ E +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKA-SRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 376 HYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
L+D+ S+ G A R S+ G ++ + + A +S N+ QA A
Sbjct: 154 IVSSLIDMYSKFGEVGNA-----RKVFSDLGEQDLVVFNAMISGYANNSQADEA 202
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 159/507 (31%), Positives = 237/507 (46%), Gaps = 55/507 (10%)
Query: 41 SRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRN- 99
S V +C + G + A ++F + + +I F N L +F M ++
Sbjct: 236 SMVYGYCRY---GDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDV 292
Query: 100 -GLSPDNYTIPYALKACAAL--RDHSLGE-----------------------MIHGYSSK 133
+SP+ T+ AC L LGE ++H Y+S
Sbjct: 293 DAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASS 352
Query: 134 LGLL----------FDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL-SAVSWSLMISGYA 182
GL+ FD+ N +I Y GD+ A +F+ + SL VSW+ MI GY
Sbjct: 353 -GLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYL 411
Query: 183 KVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVS 242
+ GDV A F + +KD W MISG VQN F E L M + P S +
Sbjct: 412 EAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSV 471
Query: 243 ILSACAHMGALDTGVWVHRYLNR--ARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD 300
+LS+ LD G +H + + A + L SL+ MYAKCG ++ A +F M
Sbjct: 472 LLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ 531
Query: 301 RDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL 360
+D V WN+MI GL+ HG AL LF EM G KP+ +TF+ V +ACS+SG+ + GL+L
Sbjct: 532 KDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLEL 591
Query: 361 LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSAC 420
M Y+++P +HY ++DLL R G +EA I + + + + + A L C
Sbjct: 592 FKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHT----VYGALLGLC 647
Query: 421 C----NHGQAQLATLAAESLVRLD--NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRV 474
+ +A AA L+ LD N G +V + N+YA GRH + +R M K V
Sbjct: 648 GLNWRDKDAEGIAERAAMRLLELDPVNAPG-HVALCNVYAGLGRHDMEKEMRKEMGIKGV 706
Query: 475 DKAPGCSSVEIDGVVMEFIAGEKTHPQ 501
K PGCS V ++G F++G+K+ +
Sbjct: 707 KKTPGCSWVVVNGRANVFLSGDKSASE 733
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/497 (21%), Positives = 190/497 (38%), Gaps = 122/497 (24%)
Query: 39 ALSRVLAFCS----HPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFT 94
+++RV+ + S + G L A +F+ + + CN ++ ++ +N +F
Sbjct: 73 SINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFR 132
Query: 95 NMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFG 154
M +N +S +T+ C R E+ + ++ N+L+ G
Sbjct: 133 EMPKNVVS---WTVMLT-ALCDDGRSEDAVELFDEMPER-----NVVSWNTLVTGLIRNG 183
Query: 155 DMVAARKVFDEIPSLSAVSWSLMISGY-------------------------------AK 183
DM A++VFD +PS VSW+ MI GY +
Sbjct: 184 DMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCR 243
Query: 184 VGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQ--LTDIGPDESIFV 241
GDV A F E PE++ W AMISG+ N ++E L LF M+ + + P+ +
Sbjct: 244 YGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLI 303
Query: 242 SILSACAHMGA------------LDTGVW-------------VHRYLNRARLPLSIRLST 276
S+ AC +G + + W VH Y + + + L
Sbjct: 304 SLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN 363
Query: 277 SLLDM---------YAKCGNLDLAKRLFD------------------------------- 296
D+ Y K G+L+ A+ LF+
Sbjct: 364 ESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLF 423
Query: 297 -SMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMAS 355
+ D+D V W MISGL + A L S+M + G+KP + T+ + ++ +
Sbjct: 424 QKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLD 483
Query: 356 EGLKL---LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLA 412
+G + + K + Y +P LV + ++ G E+A I ++ ++T++
Sbjct: 484 QGKHIHCVIAKTTACY--DPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ-----KDTVS 536
Query: 413 WRAFLSACCNHGQAQLA 429
W + + +HG A A
Sbjct: 537 WNSMIMGLSHHGLADKA 553
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 111/217 (51%), Gaps = 21/217 (9%)
Query: 154 GDMVAARKVFDEIPSLSAVS----WSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMI 209
G +V AR + D+IP +++ W+ ++S YAK G +D AR+ F+ PE++ AM+
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 210 SGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLP 269
+GYV+ E LFR M + + +L+A G + V + + +
Sbjct: 116 TGYVKCRRMNEAWTLFREMPKNVVS-----WTVMLTALCDDGRSEDAVELFDEMPERNVV 170
Query: 270 LSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALK-LFSE 328
L T L+ + G+++ AK++FD+MP RD+V WNAMI G + DG+ K LF +
Sbjct: 171 SWNTLVTGLI----RNGDMEKAKQVFDAMPSRDVVSWNAMIKGY-IENDGMEEAKLLFGD 225
Query: 329 MEKLGIKPDDITFIA-VFTACSYSGMASEGLKLLDKM 364
M + + +T+ + V+ C Y G E +L +M
Sbjct: 226 MSEKNV----VTWTSMVYGYCRY-GDVREAYRLFCEM 257
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 138/323 (42%), Gaps = 53/323 (16%)
Query: 118 LRDHSLGEMIHGYS-----SKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
LR S G ++H + G + + SL++ Y G + AR +F+ +P + V
Sbjct: 50 LRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIV 109
Query: 173 SWSLMISGYAKV------------------------------GDVDLARLFFDETPEKDK 202
+ + M++GY K G + A FDE PE++
Sbjct: 110 TCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNV 169
Query: 203 GIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRY 262
W +++G ++N ++ +F M D+ ++ + + G+ +
Sbjct: 170 VSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIE--------NDGMEEAKL 221
Query: 263 LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGA 322
L ++ TS++ Y + G++ A RLF MP+R+IV W AMISG A + A
Sbjct: 222 LFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREA 281
Query: 323 LKLFSEMEK--LGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS--VYNMEPKSEHYG 378
L LF EM+K + P+ T I++ AC G+ E +L +++ + + N +H G
Sbjct: 282 LMLFLEMKKDVDAVSPNGETLISLAYAC--GGLGVEFRRLGEQLHAQVISNGWETVDHDG 339
Query: 379 ----CLVDLLSRTGFFEEAMVII 397
LV + + +G A ++
Sbjct: 340 RLAKSLVHMYASSGLIASAQSLL 362
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 215/440 (48%), Gaps = 39/440 (8%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
+ +K + G L + + + +GL + T L+ C ++++ G+ IH
Sbjct: 80 DKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFV 136
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
+G + ++ L+ +Y + GD+ A +F + K+ D+
Sbjct: 137 VGFALNEYLKVKLLILYALSGDLQTAGILFRSL----------------KIRDL------ 174
Query: 194 FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGAL 253
P W AMISGYVQ +EGL+++ M+ I PD+ F S+ AC+ + L
Sbjct: 175 ---IP------WNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRL 225
Query: 254 DTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGL 313
+ G H + + + +I + ++L+DMY KC + R+FD + R+++ W ++ISG
Sbjct: 226 EHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGY 285
Query: 314 AMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPK 373
HG LK F +M++ G +P+ +TF+ V TAC++ G+ +G + M Y +EP+
Sbjct: 286 GYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPE 345
Query: 374 SEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAA 433
+HY +VD L R G +EA + + + E W + L AC HG +L LAA
Sbjct: 346 GQHYAAMVDTLGRAGRLQEAYEFVMK----SPCKEHPPVWGSLLGACRIHGNVKLLELAA 401
Query: 434 ESLVRLDNPS-GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEF 492
+ LD + G YV+ +N YA+ G +VR M+N V K PG S +E+ G V F
Sbjct: 402 TKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRF 461
Query: 493 IAGEKTHPQMDEIHSILEKM 512
+ + +H ++I+ + +M
Sbjct: 462 MKDDTSHRLSEKIYKKVHEM 481
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 132/314 (42%), Gaps = 40/314 (12%)
Query: 11 LLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH 67
LL++CK K+ K+ HAQ+F G N + ++L + G L A +F+ ++
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLIL--YALSGDLQTAGILFRSLKI 171
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
+ N +I ++ G L ++ +M +N + PD YT +AC+AL G+
Sbjct: 172 RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRA 231
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
H K + +I V ++L+ MY +VFD++ + + ++W+ +ISGY G V
Sbjct: 232 HAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV 291
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
E L F M+ P+ F+ +L+AC
Sbjct: 292 S-------------------------------EVLKCFEKMKEEGCRPNPVTFLVVLTAC 320
Query: 248 AHMGALDTGVWVHRYLNRARLPLSI--RLSTSLLDMYAKCGNLDLAKRLFDSMPDRD-IV 304
H G +D G W H Y + + + +++D + G L A P ++
Sbjct: 321 NHGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPP 379
Query: 305 CWNAMISGLAMHGD 318
W +++ +HG+
Sbjct: 380 VWGSLLGACRIHGN 393
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 20/233 (8%)
Query: 196 ETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDT 255
+T + DK + G ++G + KE + L+ + + + + +L C
Sbjct: 75 KTEKLDKTLKGLCVTGRL-----KEAV---GLLWSSGLQVEPETYAVLLQECKQRKEYTK 126
Query: 256 GVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAM 315
G +H + L+ L LL +YA G+L A LF S+ RD++ WNAMISG
Sbjct: 127 GKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQ 186
Query: 316 HGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK---LLDKMFSVYNMEP 372
G L ++ +M + I PD TF +VF ACS G + ++ K N+
Sbjct: 187 KGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIV 246
Query: 373 KSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQ 425
S LVD+ + F + + +++ N + W + +S HG+
Sbjct: 247 DS----ALVDMYFKCSSFSDGHRVFDQLSTRN-----VITWTSLISGYGYHGK 290
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 227/478 (47%), Gaps = 45/478 (9%)
Query: 76 IIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLG 135
+I + NG + L +F M G+ P+ TI A+ AC+ L+ + G +H + K+G
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMG 382
Query: 136 LLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSA------------------------ 171
+ D+ VGNSL+ MY G + ARKVFD + +
Sbjct: 383 FIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 172 -----------VSWSLMISGYAKVGD----VDL-ARLFFDETPEKDKGIWGAMISGYVQN 215
++W+ MISGY K GD +DL R+ D +++ W +I+GY+QN
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 216 NCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLS 275
E L LFR MQ + P+ +S+L ACA++ +H + R L +
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVK 562
Query: 276 TSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIK 335
+L D YAK G+++ ++ +F M +DI+ WN++I G +HG AL LF++M+ GI
Sbjct: 563 NALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGIT 622
Query: 336 PDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMV 395
P+ T ++ A G EG K+ + + Y++ P EH +V L R EEA+
Sbjct: 623 PNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQ 682
Query: 396 IIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NPSGLYVLISNLYA 454
I+ + N ET W +FL+ C HG +A AAE+L L+ + ++S +YA
Sbjct: 683 FIQEM----NIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYA 738
Query: 455 ASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
+ ++ + K G S +E+ ++ F G+++ D ++ ++EKM
Sbjct: 739 LGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKM 796
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 225/495 (45%), Gaps = 52/495 (10%)
Query: 9 LTLLEKCKN-----MKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQ 63
L LLE C + + ++ A +FT + + F +++L+ + G + A KVF
Sbjct: 85 LKLLESCIDSGSIHLGRILHARFGLFT---EPDVFVETKLLSM--YAKCGCIADARKVFD 139
Query: 64 RIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSL 123
++ + + +I A+ +F M+++G+ PD++ P L+ CA D
Sbjct: 140 SMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEA 199
Query: 124 GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVF-------------------- 163
G++IH KLG+ + V NS++A+Y G++ A K F
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 164 ---------------DEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPE----KDKGI 204
E S V+W+++I GY ++G D A + D
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFT 319
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLN 264
W AMISG + N + L +FR M L + P+ +S +SAC+ + ++ G VH
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAV 379
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALK 324
+ + + SL+DMY+KCG L+ A+++FDS+ ++D+ WN+MI+G G A +
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYE 439
Query: 325 LFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLL 384
LF+ M+ ++P+ IT+ + + +G E + L +M ++ + + ++
Sbjct: 440 LFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGY 499
Query: 385 SRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVR--LDNP 442
+ G +EA+ + R++ S ++ + L AC N A++ ++R LD
Sbjct: 500 IQNGKKDEALELFRKMQFS-RFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAI 558
Query: 443 SGLYVLISNLYAASG 457
+ +++ YA SG
Sbjct: 559 HAVKNALTDTYAKSG 573
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 149/314 (47%), Gaps = 32/314 (10%)
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPD 236
++S YAK G + AR FD E++ W AMI Y + N ++E LFRLM + PD
Sbjct: 121 LLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 180
Query: 237 ESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFD 296
+ +F IL CA+ G ++ G +H + + + +R+S S+L +YAKCG LD A + F
Sbjct: 181 DFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFR 240
Query: 297 SMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASE 356
M +RD++ WN+++ +G A++L EMEK GI P +T+ + + G
Sbjct: 241 RMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDA 300
Query: 357 GLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAF 416
+ L+ KM E +G D+ + T +I I N + + F
Sbjct: 301 AMDLMQKM----------ETFGITADVFTWTA------MISGLIHNGMRYQALDMFRKMF 344
Query: 417 LSACCNHGQAQLATLAAESLVRLDNPSGLY------------VLISN----LYAASGRHA 460
L+ + ++ ++A S +++ N VL+ N +Y+ G+
Sbjct: 345 LAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLE 404
Query: 461 DVRRVRDVMKNKRV 474
D R+V D +KNK V
Sbjct: 405 DARKVFDSVKNKDV 418
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 107/268 (39%), Gaps = 38/268 (14%)
Query: 58 ACKVFQRIQ-----HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
A +FQR++ N II ++ NG + L +F M + P++ TI L
Sbjct: 472 AMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
ACA L + IHG + L V N+L Y GD+ +R +F + + +
Sbjct: 532 PACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDII 591
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
+W+ ++I GYV + + L LF M+
Sbjct: 592 TWN-------------------------------SLIGGYVLHGSYGPALALFNQMKTQG 620
Query: 233 IGPDESIFVSILSACAHMGALDTGVWV-HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
I P+ SI+ A MG +D G V + N + ++ ++++ +Y + L+ A
Sbjct: 621 ITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEA 680
Query: 292 KRLFDSMP-DRDIVCWNAMISGLAMHGD 318
+ M + W + ++G +HGD
Sbjct: 681 LQFIQEMNIQSETPIWESFLTGCRIHGD 708
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 250/511 (48%), Gaps = 38/511 (7%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
LTLL+ LKQ HA+V GL + + +++ S+ GS++ A +VF +
Sbjct: 210 LTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMIS--SYADCGSVSDAKRVFDGLGGS 267
Query: 69 TVCIC-NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
I N++I F + +F M R+ + D YT L AC+ G+ +
Sbjct: 268 KDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSL 327
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
HG K GL N+LI+MY F P+ G +
Sbjct: 328 HGMVIKKGLEQVTSATNALISMYIQF-------------PT----------------GTM 358
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
+ A F+ KD W ++I+G+ Q ++ + F ++ ++I D+ F ++L +C
Sbjct: 359 EDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSC 418
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR-DIVCW 306
+ + L G +H ++ + + +SL+ MY+KCG ++ A++ F + + V W
Sbjct: 419 SDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAW 478
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
NAMI G A HG G +L LFS+M +K D +TF A+ TACS++G+ EGL+LL+ M
Sbjct: 479 NAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEP 538
Query: 367 VYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQA 426
VY ++P+ EHY VDLL R G +A + + S + + + + FL C G+
Sbjct: 539 VYKIQPRMEHYAAAVDLLGRAGLVNKA----KELIESMPLNPDPMVLKTFLGVCRACGEI 594
Query: 427 QLATLAAESLVRLDNPSGL-YVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEI 485
++AT A L+ ++ YV +S++Y+ + + V+ +MK + V K PG S +EI
Sbjct: 595 EMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEI 654
Query: 486 DGVVMEFIAGEKTHPQMDEIHSILEKMHLQL 516
V F A ++++P +I+ +++ + ++
Sbjct: 655 RNQVKAFNAEDRSNPLCQDIYMMIKDLTQEM 685
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 184/416 (44%), Gaps = 43/416 (10%)
Query: 19 KQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIK 78
++L H G ++ + +R+L S+ G L YA +F + NT+I
Sbjct: 17 QKLSLTHCYAIKCGSISDIYVSNRILD--SYIKFGFLGYANMLFDEMPKRDSVSWNTMIS 74
Query: 79 AFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLF 138
+ G L +FT M R+G D Y+ LK A+++ LGE +HG K G
Sbjct: 75 GYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC 134
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
+++VG+SL+ MY + A + F EI ++VSW+ +I+G+ +V D+
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDI----------- 183
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQL-TDIGPDESIFVSILSACAHMGALDTGV 257
K +L LM++ + D F +L+ +
Sbjct: 184 --------------------KTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLK 223
Query: 258 WVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM-PDRDIVCWNAMISGLAMH 316
VH + + L I + +++ YA CG++ AKR+FD + +D++ WN+MI+G + H
Sbjct: 224 QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
Query: 317 GDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEH 376
A +LF +M++ ++ D T+ + +ACS G K L M +E +
Sbjct: 284 ELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFG-KSLHGMVIKKGLEQVTSA 342
Query: 377 YGCLVDLLSR--TGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLAT 430
L+ + + TG E+A+ + + S++ ++W + ++ G ++ A
Sbjct: 343 TNALISMYIQFPTGTMEDALSLFESLK-----SKDLISWNSIITGFAQKGLSEDAV 393
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 137/341 (40%), Gaps = 43/341 (12%)
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
+ H Y+ K G + DI+V N ++ Y FG + GYA
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFL-----------------------GYA--- 54
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILS 245
+ FDE P++D W MISGY ++ LF M+ + D F +L
Sbjct: 55 -----NMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLK 109
Query: 246 ACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVC 305
A + D G VH + + ++ + +SL+DMYAKC ++ A F + + + V
Sbjct: 110 GIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVS 169
Query: 306 WNAMISGLAMHGDGIGALKLFSEME-KLGIKPDDITFIAVFTACSYSGMASEGLKLLDKM 364
WNA+I+G D A L ME K + D TF + T M LK +
Sbjct: 170 WNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLD-DPMFCNLLKQVHAK 228
Query: 365 FSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
++ + ++ + G +A +R+ + GS++ ++W + ++ H
Sbjct: 229 VLKLGLQHEITICNAMISSYADCGSVSDA----KRVFDGLGGSKDLISWNSMIAGFSKH- 283
Query: 425 QAQLATLAAESLVRLDN---PSGLYVLISNLYAASGRHADV 462
+L A E +++ + +Y L A SG +
Sbjct: 284 --ELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI 322
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 234/497 (47%), Gaps = 42/497 (8%)
Query: 19 KQLKQAHAQVFTSGLD-NNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTII 77
K+ +++H GL+ +N F S ++ + G A V R++ V + +I
Sbjct: 182 KEAQRSHGLAVILGLEVSNVFVGSALVDM--YVKFGKTREAKLVLDRVEEKDVVLITALI 239
Query: 78 KAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLL 137
+ G + F +ML + P+ YT L +C L+D G++IHG K G
Sbjct: 240 VGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFE 299
Query: 138 FDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDET 197
+ SL+ MY + + +VF I + VSW+
Sbjct: 300 SALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWT---------------------- 337
Query: 198 PEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGV 257
++ISG VQN + L FR M I P+ S L C+++ + G
Sbjct: 338 ---------SLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGR 388
Query: 258 WVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHG 317
+H + + + L+D+Y KCG D+A+ +FD++ + D++ N MI A +G
Sbjct: 389 QIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNG 448
Query: 318 DGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHY 377
G AL LF M LG++P+D+T ++V AC+ S + EG +L D F + ++HY
Sbjct: 449 FGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDS-FRKDKIMLTNDHY 507
Query: 378 GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLV 437
C+VDLL R G EEA ++ + N + + WR LSAC H + ++A ++
Sbjct: 508 ACMVDLLGRAGRLEEAEMLTTEVINPD-----LVLWRTLLSACKVHRKVEMAERITRKIL 562
Query: 438 RLD-NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGE 496
++ G +L+SNLYA++G+ V ++ MK+ ++ K P S VEI+ F+AG+
Sbjct: 563 EIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGD 622
Query: 497 K-THPQMDEIHSILEKM 512
+HP ++I LE++
Sbjct: 623 LFSHPNSEQILENLEEL 639
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 148/337 (43%), Gaps = 33/337 (9%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + YA +VF + + N++I + + + ++ M+ N + PD YT+
Sbjct: 113 GDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVF 172
Query: 113 KACAALRDHSLGEMIHGYSSKLGL-LFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSA 171
KA + L + HG + LGL + ++FVG++L+ MY FG A+
Sbjct: 173 KAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAK----------- 221
Query: 172 VSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
L D EKD + A+I GY Q E + F+ M +
Sbjct: 222 --------------------LVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVE 261
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
+ P+E + S+L +C ++ + G +H + ++ ++ TSLL MY +C +D +
Sbjct: 262 KVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDS 321
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYS 351
R+F + + V W ++ISGL +G AL F +M + IKP+ T + CS
Sbjct: 322 LRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNL 381
Query: 352 GMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTG 388
M EG + + + + Y + L+DL + G
Sbjct: 382 AMFEEG-RQIHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 160/360 (44%), Gaps = 41/360 (11%)
Query: 10 TLLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTY-ACKVFQRI 65
++L C N+K + K H + SG ++ AL+ + + + SL + +VF+ I
Sbjct: 272 SVLISCGNLKDIGNGKLIHGLMVKSGFES---ALASQTSLLTMYLRCSLVDDSLRVFKCI 328
Query: 66 QHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGE 125
++P ++I + NG L F M+R+ + P+++T+ AL+ C+ L G
Sbjct: 329 EYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGR 388
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
IHG +K G D + G+ LI +Y G AR VFD + + +S + MI YA
Sbjct: 389 QIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYA--- 445
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILS 245
QN +E L LF M + P++ +S+L
Sbjct: 446 ----------------------------QNGFGREALDLFERMINLGLQPNDVTVLSVLL 477
Query: 246 ACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVC 305
AC + ++ G + + ++ L+ ++D+ + G L+ A+ L + + D+V
Sbjct: 478 ACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVL 537
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKLGIKP-DDITFIAVFTACSYSGMASEGLKLLDKM 364
W ++S +H A ++ ++ L I+P D+ T I + + +G + +++ KM
Sbjct: 538 WRTLLSACKVHRKVEMAERITRKI--LEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKM 595
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 130/288 (45%), Gaps = 7/288 (2%)
Query: 170 SAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQ 229
+ +S S ++ K GD+D AR FD E+ W ++I+ +++ KE + ++RLM
Sbjct: 98 AEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMI 157
Query: 230 LTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLS-IRLSTSLLDMYAKCGNL 288
++ PDE S+ A + + H L +S + + ++L+DMY K G
Sbjct: 158 TNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKT 217
Query: 289 DLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTAC 348
AK + D + ++D+V A+I G + G+ A+K F M ++P++ T+ +V +C
Sbjct: 218 REAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISC 277
Query: 349 SYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSE 408
G KL+ + E L+ + R ++++ + + I N
Sbjct: 278 GNLKDIGNG-KLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQ--- 333
Query: 409 ETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAAS 456
++W + +S +G+ ++A + ++R + L S L S
Sbjct: 334 --VSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCS 379
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 225 FRLMQLT-DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYA 283
FRL+ +T D F +L C ++ + ++ ++ P I + L+D
Sbjct: 52 FRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASL 110
Query: 284 KCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIA 343
KCG++D A+++FD M +R IV WN++I+ L H A++++ M + PD+ T +
Sbjct: 111 KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSS 170
Query: 344 VFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYG-CLVDLLSRTGFFEEAMVIIRRITN 402
VF A S + E + + + +E + G LVD+ + G EA +++ R+
Sbjct: 171 VFKAFSDLSLEKEAQR-SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEE 229
Query: 403 SN------------NGSEETLAWRAFLSACCNHGQAQLATLAA 433
+ E+T A +AF S Q T A+
Sbjct: 230 KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYAS 272
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 236/495 (47%), Gaps = 36/495 (7%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTY-ACKVFQRIQHPTVCICNTIIKAF 80
KQ H GL + + + V++ H G+ Y A VF+ I+ + N++I AF
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 81 LINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGL-LFD 139
+ + VF M +G+ D T+ L C++L S +++ SK L L
Sbjct: 237 QCCNLGKKAIGVFMRMHSDGVGFDRATL---LNICSSLYKSS--DLVPNEVSKCCLQLHS 291
Query: 140 IFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPE 199
+ V + L+ V ++ KV+ E M+ Y D +LF + +
Sbjct: 292 LTVKSGLVTQTEVATALI---KVYSE-----------MLEDY-----TDCYKLFMEMSHC 332
Query: 200 KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWV 259
+D W +I+ + + + ++LF ++ + PD F S+L ACA + + +
Sbjct: 333 RDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSI 391
Query: 260 HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDG 319
H + + L+ SL+ YAKCG+LDL R+FD M RD+V WN+M+ ++HG
Sbjct: 392 HAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQV 451
Query: 320 IGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC 379
L +F +K+ I PD TFIA+ +ACS++G EGL++ MF P+ HY C
Sbjct: 452 DSILPVF---QKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYAC 508
Query: 380 LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRL 439
++D+LSR F EA +I+++ + + W A L +C HG +L LAA+ L L
Sbjct: 509 VIDMLSRAERFAEAEEVIKQMPM----DPDAVVWIALLGSCRKHGNTRLGKLAADKLKEL 564
Query: 440 DNPSG--LYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEK 497
P+ Y+ +SN+Y A G + M+ RV K P S EI V EF +G +
Sbjct: 565 VEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGR 624
Query: 498 THPQMDEIHSILEKM 512
P + ++ L+++
Sbjct: 625 HRPDKEAVYRELKRL 639
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 123/273 (45%), Gaps = 43/273 (15%)
Query: 77 IKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGY--SSKL 134
++ + +G++ R + +F + S Y + +ACA R+ G +H + S
Sbjct: 33 LRTLVRSGDIRRAVSLFYSAPVELQSQQAYAALF--QACAEQRNLLDGINLHHHMLSHPY 90
Query: 135 GLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFF 194
++ + N LI MY G+++ AR+VFD +P + VSW+ +I+GY + G+
Sbjct: 91 CYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNE------- 143
Query: 195 DETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALD 254
+EG LF M L+ P+E S+L++C + +
Sbjct: 144 ------------------------QEGFCLFSSM-LSHCFPNEFTLSSVLTSCRY----E 174
Query: 255 TGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKR---LFDSMPDRDIVCWNAMIS 311
G VH + L SI ++ +++ MY +C + A +F+++ +++V WN+MI+
Sbjct: 175 PGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIA 234
Query: 312 GLAMHGDGIGALKLFSEMEKLGIKPDDITFIAV 344
G A+ +F M G+ D T + +
Sbjct: 235 AFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI 267
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 237 ESIFVSILSACAHMGALDTGVWVHRYLNRARLPLS--IRLSTSLLDMYAKCGNLDLAKRL 294
+ + ++ ACA L G+ +H ++ S + L+ L++MYAKCGN+ A+++
Sbjct: 59 QQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQV 118
Query: 295 FDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYS-GM 353
FD+MP+R++V W A+I+G G+ LFS M P++ T +V T+C Y G
Sbjct: 119 FDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCRYEPGK 177
Query: 354 ASEGLKL-LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLA 412
GL L L S+Y YG D + EA + I N +
Sbjct: 178 QVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAY----EAWTVFEAIKFKN-----LVT 228
Query: 413 WRAFLSA--CCNHGQAQLATL 431
W + ++A CCN G+ +
Sbjct: 229 WNSMIAAFQCCNLGKKAIGVF 249
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 242/510 (47%), Gaps = 47/510 (9%)
Query: 10 TLLEKCKN---MKQLKQAHAQVFTSGLDNNSF---ALSRVLAFCSHPHQGSLTYACKVFQ 63
+ + C N +++ KQ H GL ++ F L + + CS + A +V
Sbjct: 141 VVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGE-----AIRVLD 195
Query: 64 RIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSL 123
+ + + + ++ + +L G L V +N T +L+ + LRD +L
Sbjct: 196 DLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNL 255
Query: 124 GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK 183
+H + G ++ +LI MY K
Sbjct: 256 ALQVHSRMVRFGFNAEVEACGALINMY-------------------------------GK 284
Query: 184 VGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
G V A+ FD+T ++ + ++ Y Q+ F+E L LF M ++ P+E F +
Sbjct: 285 CGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAIL 344
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI 303
L++ A + L G +H + ++ + + +L++MYAK G+++ A++ F M RDI
Sbjct: 345 LNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDI 404
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDK 363
V WN MISG + HG G AL+ F M G P+ ITFI V ACS+ G +GL ++
Sbjct: 405 VTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQ 464
Query: 364 MFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNH 423
+ ++++P +HY C+V LLS+ G F++A +R + + +AWR L+AC
Sbjct: 465 LMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMR----TAPIEWDVVAWRTLLNACYVR 520
Query: 424 GQAQLATLAAE-SLVRLDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSS 482
+L AE ++ + N SG+YVL+SN++A S V +VR +M N+ V K PG S
Sbjct: 521 RNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSW 580
Query: 483 VEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
+ I F+A + HP++ I++ ++++
Sbjct: 581 IGIRNQTHVFLAEDNQHPEITLIYAKVKEV 610
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 157/381 (41%), Gaps = 38/381 (9%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLS-PDNYTIPYALKACA 116
A K+F + V ++K + +G L +F +M +G S P+ + K+C+
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCS 147
Query: 117 ALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSL 176
G+ HG K GL+ FV N+L+ MY + A +V D++P
Sbjct: 148 NSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYC------- 200
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPD 236
D ++ + +SGY++ FKEGL + R D +
Sbjct: 201 ------------------------DLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWN 236
Query: 237 ESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFD 296
++S L +++ L+ + VH + R + +L++MY KCG + A+R+FD
Sbjct: 237 NLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFD 296
Query: 297 SMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASE 356
++I ++ AL LFS+M+ + P++ TF + + + + +
Sbjct: 297 DTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQ 356
Query: 357 GLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAF 416
G LL + LV++ +++G E+A R S + + W
Sbjct: 357 G-DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA-----RKAFSGMTFRDIVTWNTM 410
Query: 417 LSACCNHGQAQLATLAAESLV 437
+S C +HG + A A + ++
Sbjct: 411 ISGCSHHGLGREALEAFDRMI 431
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 243 ILSACAHMGALDTGVWVHRYL---NRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
+L CA+ L G +H +L N++ SL+++Y KC A++LFD MP
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLG-IKPDDITFIAVFTACSYSGMASEG 357
+R++V W AM+ G G LKLF M G +P++ VF +CS SG EG
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEG 155
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFK-EGLYLFRLMQLT-DIG 234
+I+ Y K + AR FD PE++ W AM+ GY QN+ F E L LF+ M + +
Sbjct: 75 LINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGY-QNSGFDFEVLKLFKSMFFSGESR 133
Query: 235 PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRL 294
P+E + + +C++ G ++ G H + L + +L+ MY+ C A R+
Sbjct: 134 PNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRV 193
Query: 295 FDSMPDRDIVCWNAMISG 312
D +P D+ +++ +SG
Sbjct: 194 LDDLPYCDLSVFSSALSG 211
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 187/332 (56%), Gaps = 8/332 (2%)
Query: 55 LTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKA 114
L A K F R+ +V N ++ + NG L +F +MLR G+ P+ T + A
Sbjct: 214 LENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA 273
Query: 115 CAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL-SAVS 173
C+ D SL + + + + FV +L+ M+ D+ +AR++F+E+ + + V+
Sbjct: 274 CSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVT 333
Query: 174 WSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFR-LMQLTD 232
W+ MISGY ++GD+ AR FD P+++ W ++I+GY N + F ++ D
Sbjct: 334 WNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGD 393
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
PDE +S+LSAC HM L+ G + Y+ + ++ L+ SL+ MYA+ GNL AK
Sbjct: 394 SKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAK 453
Query: 293 RLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
R+FD M +RD+V +N + + A +GDG+ L L S+M+ GI+PD +T+ +V TAC+ +G
Sbjct: 454 RVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAG 513
Query: 353 MASEGLKLLDKMFSVYNMEPKSEHYGCLVDLL 384
+ EG ++ S+ N P ++HY C+ DLL
Sbjct: 514 LLKEGQRIFK---SIRN--PLADHYACM-DLL 539
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 210/458 (45%), Gaps = 74/458 (16%)
Query: 20 QLKQAHAQ--VFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTII 77
QL Q HAQ VF S L S+ SR+++ C+ S Y +F + P V + N++
Sbjct: 21 QLNQIHAQLIVFNS-LPRQSYWASRIISCCTRLRAPSY-YTRLIFDSVTFPNVFVVNSMF 78
Query: 78 KAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLL 137
K F N L ++ R G+ PD ++ P +K+ G + KLG
Sbjct: 79 KYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG-----RFGILFQALVEKLGFF 133
Query: 138 FDIFVGNSLIAMYCVFGDMVAARKVFDEI------------------------------- 166
D +V N ++ MY + +ARKVFD+I
Sbjct: 134 KDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMM 193
Query: 167 PSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFR 226
P VSW++MI+G+AKV D++ AR +FD PEK W AM+SGY QN ++ L LF
Sbjct: 194 PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFN 253
Query: 227 LMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKC- 285
M + P+E+ +V ++SAC+ + + ++ R+ L+ + T+LLDM+AKC
Sbjct: 254 DMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 286 -------------------------------GNLDLAKRLFDSMPDRDIVCWNAMISGLA 314
G++ A++LFD+MP R++V WN++I+G A
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYA 373
Query: 315 MHGDGIGALKLFSEMEKLG-IKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPK 373
+G A++ F +M G KPD++T I+V +AC + G ++D + ++
Sbjct: 374 HNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI-RKNQIKLN 432
Query: 374 SEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETL 411
Y L+ + +R G EA + + + S TL
Sbjct: 433 DSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTL 470
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 232/480 (48%), Gaps = 40/480 (8%)
Query: 10 TLLEKCKNMKQLK---QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
++L+ CK++ LK Q H V N S +L+ + G + A F ++
Sbjct: 118 SVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSL--YARCGKMEEARLQFDSMK 175
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
+ N +I + N + + +F ML G PD +T L+A ++ +
Sbjct: 176 ERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSE 235
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
+HG + KLG + SL+ Y G + A K+ + +S + +I+G+++
Sbjct: 236 LHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQ--- 292
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
QNNC + +F+ M DE + S+L
Sbjct: 293 ---------------------------QNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKI 325
Query: 247 CAHMGALDTGVWVHRY-LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVC 305
C + ++ G +H + L +++ + L SL+DMYAK G ++ A F+ M ++D+
Sbjct: 326 CTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRS 385
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMF 365
W ++I+G HG+ A+ L++ ME IKP+D+TF+++ +ACS++G G K+ D M
Sbjct: 386 WTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMI 445
Query: 366 SVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQ 425
+ + +E + EH C++D+L+R+G+ EEA +IR + S T W AFL AC HG
Sbjct: 446 NKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSST--WGAFLDACRRHGN 503
Query: 426 AQLATLAAESLVRLDNPSGL-YVLISNLYAASGRHADVRRVRDVMKNK-RVDKAPGCSSV 483
QL+ +AA L+ ++ + Y+ ++++YAA+G + R +MK +KAPG S V
Sbjct: 504 VQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 93/172 (54%)
Query: 176 LMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGP 235
++I Y K GDV AR FD ++D W AMIS + + + L LF+ M D+
Sbjct: 52 MLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKA 111
Query: 236 DESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLF 295
++ + S+L +C +G L G+ +H + + ++ + ++LL +YA+CG ++ A+ F
Sbjct: 112 NQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQF 171
Query: 296 DSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTA 347
DSM +RD+V WNAMI G + + LF M G KPD TF ++ A
Sbjct: 172 DSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 164/412 (39%), Gaps = 39/412 (9%)
Query: 19 KQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIK 78
KQL H T+G +N L +L + QG + +A K+F RI V +I
Sbjct: 29 KQLLLIHGNSITNGFCSN-LQLKDMLIDL-YLKQGDVKHARKLFDRISKRDVVSWTAMIS 86
Query: 79 AFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLF 138
F G L +F M R + + +T LK+C L G IHG K
Sbjct: 87 RFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAG 146
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
++ V ++L+++Y G M AR FD + VSW+
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNA---------------------- 184
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVW 258
MI GY N C LF+LM PD F S+L A + L+
Sbjct: 185 ---------MIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSE 235
Query: 259 VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGD 318
+H + S L SL++ Y KCG+L A +L + RD++ A+I+G + +
Sbjct: 236 LHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNN 295
Query: 319 GIG-ALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHY 377
A +F +M ++ K D++ ++ C+ + G ++ +
Sbjct: 296 CTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALG 355
Query: 378 GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
L+D+ +++G E+A++ + ++ +W + ++ HG + A
Sbjct: 356 NSLIDMYAKSGEIEDAVLAFEEMKE-----KDVRSWTSLIAGYGRHGNFEKA 402
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 238 SIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDS 297
S+++ L C++ + +H +++L L+D+Y K G++ A++LFD
Sbjct: 13 SLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDR 72
Query: 298 MPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEG 357
+ RD+V W AMIS + G AL LF EM + +K + T+ +V +C G EG
Sbjct: 73 ISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG 132
Query: 358 LKL---LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWR 414
+++ ++K N+ +S L+ L +R G EEA R+ + + ++W
Sbjct: 133 MQIHGSVEKGNCAGNLIVRS----ALLSLYARCGKMEEA-----RLQFDSMKERDLVSWN 183
Query: 415 AFL 417
A +
Sbjct: 184 AMI 186
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 211/438 (48%), Gaps = 43/438 (9%)
Query: 53 GSLTYACKVFQRI-QHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYA 111
G ++ A KVF + Q +T++ +L L +F M ++ + + T+
Sbjct: 174 GKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSF 233
Query: 112 LKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSA 171
L A + L D S E H K+GL D+ + +LI MY
Sbjct: 234 LSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMY--------------------- 272
Query: 172 VSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
K G + AR FD KD W MI Y + +E ++L R M+
Sbjct: 273 ----------GKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYE 322
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA 291
+ P+ S FV +LS+CA+ A G V L R+ L L T+L+DMYAK G L+ A
Sbjct: 323 KMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKA 382
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLG--IKPDDITFIAVFTACS 349
+F+ M D+D+ W AMISG HG A+ LF++ME+ ++P++ITF+ V ACS
Sbjct: 383 VEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACS 442
Query: 350 YSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEE 409
+ G+ EG++ +M Y+ PK EHYGC+VDLL R G EEA +IR + +++ +
Sbjct: 443 HGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDST-- 500
Query: 410 TLAWRAFLSACCNHGQAQLATLAAESLVRL-DNPSGLYVLISNLYAASGRHADVRRVRDV 468
AWRA L+AC +G A L L + + +L++ +A +G + + D
Sbjct: 501 --AWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAG---NPEKSLDN 555
Query: 469 MKNKRVDKAPGCSSVEID 486
NK K G S++EI+
Sbjct: 556 ELNKG-RKEAGYSAIEIE 572
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 201/419 (47%), Gaps = 41/419 (9%)
Query: 12 LEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVC 71
L C++ ++ + H + +GLD + FA+S++LAF S + YA +F+ + + +
Sbjct: 35 LRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVL---DIRYASSIFEHVSNTNLF 91
Query: 72 ICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYS 131
+ NT+I+ + I+ R VF + GL+ D ++ LK+C+ S+GE +HG +
Sbjct: 92 MFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIA 151
Query: 132 SKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLAR 191
+ G + + N+LI YCV G + ARKVF
Sbjct: 152 LRSGFMVFTDLRNALIHFYCVCGKISDARKVF---------------------------- 183
Query: 192 LFFDETPEK-DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHM 250
DE P+ D + +++GY+Q + L LFR+M+ +++ + S +S LSA + +
Sbjct: 184 ---DEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDL 240
Query: 251 GALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMI 310
G L H + L L + L T+L+ MY K G + A+R+FD +D+V WN MI
Sbjct: 241 GDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMI 300
Query: 311 SGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNM 370
A G + L +M+ +KP+ TF+ + ++C+YS A G + D + +
Sbjct: 301 DQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVAD-LLEEERI 359
Query: 371 EPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
+ LVD+ ++ G E+A+ I R+ + + S W A +S HG A+ A
Sbjct: 360 ALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKS-----WTAMISGYGAHGLAREA 413
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/338 (19%), Positives = 134/338 (39%), Gaps = 34/338 (10%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
L+ + ++ + AH GLD + ++ ++ + G ++ A ++F
Sbjct: 234 LSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGM--YGKTGGISSARRIFDCAIRK 291
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
V N +I + G L + + M + P++ T L +CA +G +
Sbjct: 292 DVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVA 351
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVD 188
+ + D +G +L+ MY G + A ++F+ + SW+ MISGY G
Sbjct: 352 DLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAR 411
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
A F++ E+ NC + P+E F+ +L+AC+
Sbjct: 412 EAVTLFNKMEEE---------------NC--------------KVRPNEITFLVVLNACS 442
Query: 249 HMGALDTGVWVHRYLNRA-RLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP-DRDIVCW 306
H G + G+ + + A + ++D+ + G L+ A L ++P D W
Sbjct: 443 HGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAW 502
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLG-IKPDDITFIA 343
A+++ ++G+ + + ++G P D +A
Sbjct: 503 RALLAACRVYGNADLGESVMMRLAEMGETHPADAILLA 540
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 221/466 (47%), Gaps = 46/466 (9%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
+Q HA + G + + +S+ + G L + +VF+ ++ + N ++ FL
Sbjct: 104 RQVHALMIKQGAETGT--ISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFL 161
Query: 82 INGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIF 141
NG L VF M R + +T+ +K CA+L+ G+ +H
Sbjct: 162 RNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVH------------- 208
Query: 142 VGNSLIAMYCVFG-DMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLA-RLFFDETPE 199
AM V G D+V V + MIS Y+ VG ++ A +++
Sbjct: 209 ------AMVVVTGRDLV--------------VLGTAMISFYSSVGLINEAMKVYNSLNVH 248
Query: 200 KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWV 259
D+ + ++ISG ++N +KE L + P+ + S L+ C+ L G +
Sbjct: 249 TDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQI 303
Query: 260 HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDG 319
H R +L L+DMY KCG + A+ +F ++P + +V W +MI A++GDG
Sbjct: 304 HCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDG 363
Query: 320 IGALKLFSEM--EKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHY 377
+ AL++F EM E G+ P+ +TF+ V +AC+++G+ EG + M Y + P +EHY
Sbjct: 364 VKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHY 423
Query: 378 GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLV 437
C +D+LS+ G EE ++ R+ ++N S W A LSAC + A L+
Sbjct: 424 VCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLM 483
Query: 438 RLDNP--SGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCS 481
P + +YVL+SN YAA G+ V +R +KNK + K G S
Sbjct: 484 EETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 114/235 (48%), Gaps = 20/235 (8%)
Query: 193 FFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDES--IFVSILSACAHM 250
FDE P++D + +S ++++ + L LF +Q+ PD S F +L AC+ +
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF--LQIHRASPDLSSHTFTPVLGACSLL 97
Query: 251 GALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMI 310
+TG VH + + T+L+DMY+K G+L + R+F+S+ ++D+V WNA++
Sbjct: 98 SYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALL 157
Query: 311 SGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNM 370
SG +G G AL +F+ M + ++ + T +V C+ LK+L + V+ M
Sbjct: 158 SGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCA-------SLKILQQGKQVHAM 210
Query: 371 EPKSEH-----YGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSAC 420
+ ++ S G EAM ++ NS N + + + +S C
Sbjct: 211 VVVTGRDLVVLGTAMISFYSSVGLINEAM----KVYNSLNVHTDEVMLNSLISGC 261
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFV 142
+GN N TL +F + R ++T L AC+ L G +H K G
Sbjct: 62 SGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTIS 121
Query: 143 GNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDK 202
+LI MY +G +V + +VF+ + VSW+ ++SG+ + G K
Sbjct: 122 KTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNG----------------K 165
Query: 203 GIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRY 262
G KE L +F M + E S++ CA + L G VH
Sbjct: 166 G---------------KEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAM 210
Query: 263 LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP-DRDIVCWNAMISG 312
+ L + L T+++ Y+ G ++ A ++++S+ D V N++ISG
Sbjct: 211 VVVTGRDLVV-LGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISG 260
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 223/490 (45%), Gaps = 39/490 (7%)
Query: 25 HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLING 84
H V SGL N + +++ + G ++ + +V ++ V N +I + +
Sbjct: 385 HGLVVVSGLFYNQIIGNALVSM--YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDE 442
Query: 85 NLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDH-SLGEMIHGYSSKLGLLFDIFVG 143
+ ++ L F M G+S + T+ L AC D G+ +H Y G D V
Sbjct: 443 DPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK 502
Query: 144 NSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKG 203
NSLI MY AK GD+ ++ F+ ++
Sbjct: 503 NSLITMY-------------------------------AKCGDLSSSQDLFNGLDNRNII 531
Query: 204 IWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYL 263
W AM++ + +E L L M+ + D+ F LSA A + L+ G +H
Sbjct: 532 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 591
Query: 264 NRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGAL 323
+ + + DMY+KCG + ++ +R + WN +IS L HG
Sbjct: 592 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 651
Query: 324 KLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDL 383
F EM ++GIKP +TF+++ TACS+ G+ +GL D + + +EP EH C++DL
Sbjct: 652 ATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDL 711
Query: 384 LSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NP 442
L R+G EA I ++ N L WR+ L++C HG AAE+L +L+
Sbjct: 712 LGRSGRLAEAETFISKMPMKPN----DLVWRSLLASCKIHGNLDRGRKAAENLSKLEPED 767
Query: 443 SGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQM 502
+YVL SN++A +GR DV VR M K + K CS V++ V F G++THPQ
Sbjct: 768 DSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 827
Query: 503 DEIHSILEKM 512
EI++ LE +
Sbjct: 828 MEIYAKLEDI 837
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 178/433 (41%), Gaps = 40/433 (9%)
Query: 23 QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLI 82
Q H V SGL ++ + + +L + G ++ + KVF+ + V +++ +
Sbjct: 80 QVHGFVAKSGLLSDVYVSTAILHL--YGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 137
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFV 142
G + ++ M G+ + ++ + +C L+D SLG I G K GL + V
Sbjct: 138 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 197
Query: 143 GNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDK 202
NSLI+M G M G+VD A FD+ E+D
Sbjct: 198 ENSLISM---LGSM----------------------------GNVDYANYIFDQMSERDT 226
Query: 203 GIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRY 262
W ++ + Y QN +E +F LM+ + + ++LS H+ G +H
Sbjct: 227 ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 286
Query: 263 LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGA 322
+ + + + +LL MYA G A +F MP +D++ WN++++ G + A
Sbjct: 287 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 346
Query: 323 LKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVD 382
L L M G + +TF + AC +G ++L + V + LV
Sbjct: 347 LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVS 405
Query: 383 LLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNP 442
+ + G E+ ++ ++ + +AW A + A LAA +R++
Sbjct: 406 MYGKIGEMSESRRVLLQMPR-----RDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGV 459
Query: 443 SGLYVLISNLYAA 455
S Y+ + ++ +A
Sbjct: 460 SSNYITVVSVLSA 472
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 132/282 (46%), Gaps = 39/282 (13%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSL---GEMIHGY 130
NT++ + G + F M G+ P ++ I + AC R S+ G +HG+
Sbjct: 27 NTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACG--RSGSMFREGVQVHGF 84
Query: 131 SSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLA 190
+K GLL D++V +++ +Y V+G + +RKVF+E+P + VSW+ ++ GY+ G+
Sbjct: 85 VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE---- 140
Query: 191 RLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHM 250
PE E + +++ M+ +G +E+ ++S+C +
Sbjct: 141 -------PE--------------------EVIDIYKGMRGEGVGCNENSMSLVISSCGLL 173
Query: 251 GALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMI 310
G + + ++ L + + SL+ M GN+D A +FD M +RD + WN++
Sbjct: 174 KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 233
Query: 311 SGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
+ A +G + ++FS M + D++ V T S G
Sbjct: 234 AAYAQNGHIEESFRIFSLMRRF---HDEVNSTTVSTLLSVLG 272
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 124/248 (50%), Gaps = 7/248 (2%)
Query: 181 YAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIF 240
Y K G V AR FD P +++ W M+SG V+ + EG+ FR M I P +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 241 VSILSACAHMGAL-DTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
S+++AC G++ GV VH ++ ++ L + +ST++L +Y G + ++++F+ MP
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK 359
DR++V W +++ G + G+ + ++ M G+ ++ + V ++C S G +
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 360 LLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSA 419
++ ++ +E K L+ +L G + A I +++ +T++W + +A
Sbjct: 182 IIGQVVK-SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE-----RDTISWNSIAAA 235
Query: 420 CCNHGQAQ 427
+G +
Sbjct: 236 YAQNGHIE 243
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 281 MYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDIT 340
MY K G + A+ LFD MP R+ V WN M+SG+ G + ++ F +M LGIKP
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 341 FIAVFTACSYSG-MASEGLKL 360
++ TAC SG M EG+++
Sbjct: 61 IASLVTACGRSGSMFREGVQV 81
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 223/490 (45%), Gaps = 39/490 (7%)
Query: 25 HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLING 84
H V SGL N + +++ + G ++ + +V ++ V N +I + +
Sbjct: 368 HGLVVVSGLFYNQIIGNALVSM--YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDE 425
Query: 85 NLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDH-SLGEMIHGYSSKLGLLFDIFVG 143
+ ++ L F M G+S + T+ L AC D G+ +H Y G D V
Sbjct: 426 DPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK 485
Query: 144 NSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKG 203
NSLI MY AK GD+ ++ F+ ++
Sbjct: 486 NSLITMY-------------------------------AKCGDLSSSQDLFNGLDNRNII 514
Query: 204 IWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYL 263
W AM++ + +E L L M+ + D+ F LSA A + L+ G +H
Sbjct: 515 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 574
Query: 264 NRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGAL 323
+ + + DMY+KCG + ++ +R + WN +IS L HG
Sbjct: 575 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 634
Query: 324 KLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDL 383
F EM ++GIKP +TF+++ TACS+ G+ +GL D + + +EP EH C++DL
Sbjct: 635 ATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDL 694
Query: 384 LSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD-NP 442
L R+G EA I ++ N L WR+ L++C HG AAE+L +L+
Sbjct: 695 LGRSGRLAEAETFISKMPMKPN----DLVWRSLLASCKIHGNLDRGRKAAENLSKLEPED 750
Query: 443 SGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQM 502
+YVL SN++A +GR DV VR M K + K CS V++ V F G++THPQ
Sbjct: 751 DSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 810
Query: 503 DEIHSILEKM 512
EI++ LE +
Sbjct: 811 MEIYAKLEDI 820
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 178/433 (41%), Gaps = 40/433 (9%)
Query: 23 QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLI 82
Q H V SGL ++ + + +L + G ++ + KVF+ + V +++ +
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHL--YGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFV 142
G + ++ M G+ + ++ + +C L+D SLG I G K GL + V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 143 GNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDK 202
NSLI+M G M G+VD A FD+ E+D
Sbjct: 181 ENSLISM---LGSM----------------------------GNVDYANYIFDQMSERDT 209
Query: 203 GIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRY 262
W ++ + Y QN +E +F LM+ + + ++LS H+ G +H
Sbjct: 210 ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 269
Query: 263 LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGA 322
+ + + + +LL MYA G A +F MP +D++ WN++++ G + A
Sbjct: 270 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 329
Query: 323 LKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVD 382
L L M G + +TF + AC +G ++L + V + LV
Sbjct: 330 LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVS 388
Query: 383 LLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNP 442
+ + G E+ ++ ++ + +AW A + A LAA +R++
Sbjct: 389 MYGKIGEMSESRRVLLQMPR-----RDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGV 442
Query: 443 SGLYVLISNLYAA 455
S Y+ + ++ +A
Sbjct: 443 SSNYITVVSVLSA 455
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 132/282 (46%), Gaps = 39/282 (13%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSL---GEMIHGY 130
NT++ + G + F M G+ P ++ I + AC R S+ G +HG+
Sbjct: 10 NTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACG--RSGSMFREGVQVHGF 67
Query: 131 SSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLA 190
+K GLL D++V +++ +Y V+G + +RKVF+E+P + VSW+ ++ GY+ G+
Sbjct: 68 VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE---- 123
Query: 191 RLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHM 250
PE E + +++ M+ +G +E+ ++S+C +
Sbjct: 124 -------PE--------------------EVIDIYKGMRGEGVGCNENSMSLVISSCGLL 156
Query: 251 GALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMI 310
G + + ++ L + + SL+ M GN+D A +FD M +RD + WN++
Sbjct: 157 KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 216
Query: 311 SGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
+ A +G + ++FS M + D++ V T S G
Sbjct: 217 AAYAQNGHIEESFRIFSLMRRF---HDEVNSTTVSTLLSVLG 255
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 116/231 (50%), Gaps = 7/231 (3%)
Query: 198 PEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGAL-DTG 256
P +++ W M+SG V+ + EG+ FR M I P + S+++AC G++ G
Sbjct: 2 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREG 61
Query: 257 VWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMH 316
V VH ++ ++ L + +ST++L +Y G + ++++F+ MPDR++V W +++ G +
Sbjct: 62 VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121
Query: 317 GDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEH 376
G+ + ++ M G+ ++ + V ++C S G +++ ++ +E K
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVK-SGLESKLAV 180
Query: 377 YGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
L+ +L G + A I +++ +T++W + +A +G +
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSE-----RDTISWNSIAAAYAQNGHIE 226
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 213/435 (48%), Gaps = 50/435 (11%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + A K F+R+ N + + + G+ N+ V+ NM +G+ PD+ T+ L
Sbjct: 450 GRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGML 509
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
+ CA D++ G ++G K G + V ++LI M+ + AA +FD+
Sbjct: 510 QTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDK------- 562
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
G+ EK W M++GY+ + +E + FR M++
Sbjct: 563 ------CGF-----------------EKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEK 599
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
P+ FV+I+ A A + AL G+ VH L + + SL+DMYAKCG ++ ++
Sbjct: 600 FQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSE 659
Query: 293 RLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
+ F + ++ IV WN M+S A HG A+ LF M++ +KPD ++F++V +AC ++G
Sbjct: 660 KCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAG 719
Query: 353 MASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLA 412
+ EG ++ ++M + +E + EHY C+VDLL + G F EA+ ++RR+ +
Sbjct: 720 LVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVG----V 775
Query: 413 WRAFLSACCNHGQAQLATLAAESLVRLD--NPSGLYVLISNLYAASGRHADVRRVRDVMK 470
W A L++ H L+ A LV+L+ NPS ++ RR+ +V
Sbjct: 776 WGALLNSSRMHCNLWLSNAALCQLVKLEPLNPS--------------HYSQDRRLGEVNN 821
Query: 471 NKRVDKAPGCSSVEI 485
R+ K P CS +E+
Sbjct: 822 VSRIKKVPACSWIEV 836
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 210/462 (45%), Gaps = 78/462 (16%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHP 68
L +L +CKN + L Q H + SGL ++ ++ F + L+ +F ++ P
Sbjct: 9 LLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLF----QRQDLSRV--IFDSVRDP 62
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRN-GLSPDNYTIPYALKACAALRDHSLGEMI 127
V + N++I+ + G L F M G+ PD Y+ +ALKACA D G I
Sbjct: 63 GVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRI 122
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
H +++GL D+++G +L+ MYC D+V+AR+VFD++ V+W+ M+SG A+ G
Sbjct: 123 HDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCS 182
Query: 188 DLARLFFDETP---------------------EKD------------KGIWGAMISGYVQ 214
A L F + EK KG A SG +
Sbjct: 183 SAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLID 242
Query: 215 NNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAH------------------------- 249
C LY + DES + ++++A AH
Sbjct: 243 MYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVA 302
Query: 250 ----------MGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
+G L G+ +H Y + L + ++TSL+ MY+KCG L++A++LF ++
Sbjct: 303 AASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE 362
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK 359
DRD+V W+AMI+ G A+ LF +M ++ IKP+ +T +V C +G+A+ L
Sbjct: 363 DRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC--AGVAASRLG 420
Query: 360 LLDKMFSVY-NMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRI 400
+++ ++E + E ++ + ++ G F A+ R+
Sbjct: 421 KSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERL 462
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 161/376 (42%), Gaps = 36/376 (9%)
Query: 55 LTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKA 114
L A VF+ + T++ A+ NG L +F M + + AL+A
Sbjct: 250 LYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQA 309
Query: 115 CAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSW 174
A + D G IH Y+ + GL+ D+ V SL++MY
Sbjct: 310 AAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMY------------------------ 345
Query: 175 SLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG 234
+K G++++A F ++D W AMI+ Y Q E + LFR M I
Sbjct: 346 -------SKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIK 398
Query: 235 PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRL 294
P+ S+L CA + A G +H Y +A + + +T+++ MYAKCG A +
Sbjct: 399 PNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKA 458
Query: 295 FDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMA 354
F+ +P +D V +NA+ G GD A ++ M+ G+ PD T + + C++
Sbjct: 459 FERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDY 518
Query: 355 SEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWR 414
+ G + ++ + + + L+++ ++ A+V+ + + T++W
Sbjct: 519 ARGSCVYGQIIK-HGFDSECHVAHALINMFTKCDALAAAIVLFDKC----GFEKSTVSWN 573
Query: 415 AFLSACCNHGQAQLAT 430
++ HGQA+ A
Sbjct: 574 IMMNGYLLHGQAEEAV 589
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 276 TSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEM-EKLGI 334
L++ Y+ DL++ +FDS+ D +V WN+MI G G AL F M E+ GI
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 335 KPDDITFIAVFTACSYSGMASEGLKLLDKMFS------VYNMEPKSEHYGCLVDLLSRTG 388
PD +F AC+ S +GL++ D + VY E Y DL+S
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQ 156
Query: 389 FFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATL 431
F++ V ++ + W +S +G + A L
Sbjct: 157 VFDKMHV------------KDVVTWNTMVSGLAQNGCSSAALL 187
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 225/494 (45%), Gaps = 74/494 (14%)
Query: 23 QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLI 82
Q H + SG N + S ++ + + + A + + ++ V N++I +
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCRE--MESARALLEGMEVDDVVSWNSMIVGCVR 305
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALR-DHSLGEMIHGYSSKLGLLFDIF 141
G + L +F M + D++TIP L A R + + H K G
Sbjct: 306 QGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKL 365
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
V N+L+ MY AK G +D A F+ EKD
Sbjct: 366 VNNALVDMY-------------------------------AKRGIMDSALKVFEGMIEKD 394
Query: 202 KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHR 261
W A+++G N + E L LF M++ I PD+ + S+LSA A + L+ G VH
Sbjct: 395 VISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHG 454
Query: 262 YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG 321
++ P S+ ++ SL+ MY KCG+L+ A +F+SM RD++ W +I G A +G
Sbjct: 455 NYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG---- 510
Query: 322 ALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLV 381
+ + + D M +VY + P EHY C++
Sbjct: 511 -------------------------------LLEDAQRYFDSMRTVYGITPGPEHYACMI 539
Query: 382 DLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD- 440
DL R+G F V + ++ + + W+A L+A HG + AA++L+ L+
Sbjct: 540 DLFGRSGDF----VKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEP 595
Query: 441 NPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHP 500
N + YV +SN+Y+A+GR + VR +MK++ + K PGCS VE G V F++ ++ HP
Sbjct: 596 NNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHP 655
Query: 501 QMDEIHSILEKMHL 514
+M EI+S +++M L
Sbjct: 656 RMVEIYSKVDEMML 669
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 183/403 (45%), Gaps = 47/403 (11%)
Query: 27 QVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNL 86
Q+F + + F + ++ S+ + L+ A K+F+ N +I + +G+
Sbjct: 49 QMFDKMPERDEFTWNTMIVAYSNSRR--LSDAEKLFRSNPVKNTISWNALISGYCKSGSK 106
Query: 87 NRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSL 146
++F M +G+ P+ YT+ L+ C +L GE IHG++ K G D+ V N L
Sbjct: 107 VEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGL 166
Query: 147 IAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWG 206
+AMY + A +F+ + EK+ W
Sbjct: 167 LAMYAQCKRISEAEYLFETMEG------------------------------EKNNVTWT 196
Query: 207 AMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRA 266
+M++GY QN + + FR ++ ++ F S+L+ACA + A GV VH + ++
Sbjct: 197 SMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS 256
Query: 267 RLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLF 326
+I + ++L+DMYAKC ++ A+ L + M D+V WN+MI G G AL +F
Sbjct: 257 GFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMF 316
Query: 327 SEMEKLGIKPDDITFIAVFTACSYS----GMASEGLKLLDKM-FSVYNMEPKSEHYGCLV 381
M + +K DD T ++ + S +AS L+ K ++ Y + + LV
Sbjct: 317 GRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNA-----LV 371
Query: 382 DLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
D+ ++ G + A+ + + ++ ++W A ++ ++G
Sbjct: 372 DMYAKRGIMDSALKVFEGMI-----EKDVISWTALVTGNTHNG 409
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 144/306 (47%), Gaps = 18/306 (5%)
Query: 123 LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYA 182
G IH Y+ + L ++ +G+ G + AR++FD++P +W+ MI Y+
Sbjct: 16 FGSCIHSYADRTKLHSNLLLGD-----LSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 183 KVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVS 242
+ A F P K+ W A+ISGY ++ E LF MQ I P+E S
Sbjct: 71 NSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGS 130
Query: 243 ILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP-DR 301
+L C + L G +H + + L + + LL MYA+C + A+ LF++M ++
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK 190
Query: 302 DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL- 360
+ V W +M++G + +G A++ F ++ + G + + TF +V TAC+ G+++
Sbjct: 191 NNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVH 250
Query: 361 --LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLS 418
+ K N+ +S L+D+ ++ E A ++ + ++ ++W + +
Sbjct: 251 CCIVKSGFKTNIYVQS----ALIDMYAKCREMESARALLEGME-----VDDVVSWNSMIV 301
Query: 419 ACCNHG 424
C G
Sbjct: 302 GCVRQG 307
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 129/293 (44%), Gaps = 15/293 (5%)
Query: 18 MKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTII 77
MK AH + +G ++ L + +G + A KVF+ + V ++
Sbjct: 345 MKIASSAHCLIVKTGYA--TYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALV 402
Query: 78 KAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLL 137
NG+ + L +F NM G++PD L A A L G+ +HG K G
Sbjct: 403 TGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFP 462
Query: 138 FDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDE- 196
+ V NSL+ MY G + A +F+ + ++W+ +I GYAK G ++ A+ +FD
Sbjct: 463 SSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Query: 197 ------TPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHM 250
TP + + MI + ++ F + + +L+ ++ PD +++ +IL+A
Sbjct: 523 RTVYGITPGPEH--YACMIDLFGRSGDF---VKVEQLLHQMEVEPDATVWKAILAASRKH 577
Query: 251 GALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI 303
G ++ G + L P + L +MY+ G D A + M R+I
Sbjct: 578 GNIENGERAAKTLMELE-PNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNI 629
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/513 (27%), Positives = 250/513 (48%), Gaps = 48/513 (9%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNS---FALSRVLAFCSHPHQGSLTYACKVFQRI 65
L+L +++ KQ H+Q G ++++ AL + CS S A +VF +
Sbjct: 332 LSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCS----ASEVEASRVFGAM 387
Query: 66 QHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGE 125
P V T+I + +G + + M++ + P+ T+ L+AC+ LR
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL 447
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
IH Y + + ++ VGNSL+ Y + A V + ++++ +++ + ++G
Sbjct: 448 EIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELG 507
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILS 245
++A V N + +G+ R+ QL+ G +S
Sbjct: 508 KHEMAL--------------------SVINYMYGDGI---RMDQLSLPG--------FIS 536
Query: 246 ACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVC 305
A A++GAL+TG +H Y ++ + + SL+DMY+KCG+L+ AK++F+ + D+V
Sbjct: 537 ASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVS 596
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMF 365
WN ++SGLA +G AL F EM +PD +TF+ + +ACS + GL+ M
Sbjct: 597 WNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMK 656
Query: 366 SVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQ 425
+YN+EP+ EHY LV +L R G EEA ++ + N + ++ L AC G
Sbjct: 657 KIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNA----MIFKTLLRACRYRGN 712
Query: 426 AQLAT-LAAESLVRLDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVE 484
L +A + L + LY+L+++LY SG+ ++ R++M KR+ K G S+VE
Sbjct: 713 LSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVE 772
Query: 485 IDGVVMEFIAG-----EKTHPQMDEIHSILEKM 512
+ G V F++ +KT+ EI SI E++
Sbjct: 773 VQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEI 805
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 184/413 (44%), Gaps = 42/413 (10%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
A K+F + H TV +I AF + L +F M+ +G P+ +T +++CA
Sbjct: 77 ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAG 136
Query: 118 LRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLM 177
LRD S G +HG K G + VG+SL +Y G A ++F + + +SW++
Sbjct: 137 LRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTM- 195
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDE 237
MIS V ++E L + M + P+E
Sbjct: 196 ------------------------------MISSLVGARKWREALQFYSEMVKAGVPPNE 225
Query: 238 SIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDS 297
FV +L A + +G L+ G +H + +PL++ L TSL+D Y++ ++ A R+ +S
Sbjct: 226 FTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS 284
Query: 298 MPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEG 357
++D+ W +++SG + A+ F EM LG++P++ T+ A+ + CS G
Sbjct: 285 SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFG 344
Query: 358 LKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFE-EAMVIIRRITNSNNGSEETLAWRAF 416
++ + V E ++ LVD+ + E EA + + + N ++W
Sbjct: 345 KQIHSQTIKV-GFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPN-----VVSWTTL 398
Query: 417 LSACCNHGQAQ-LATLAAESLVRLDNPSGLYVLISNLYAASGRHADVRRVRDV 468
+ +HG Q L E + R P+ V +S + A + VRRV ++
Sbjct: 399 ILGLVDHGFVQDCFGLLMEMVKREVEPN--VVTLSGVLRACSKLRHVRRVLEI 449
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 238/500 (47%), Gaps = 43/500 (8%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
+Q H V G +N+ + ++ F + SL A KVF + P V N+++ ++
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRF--YKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYV 132
Query: 82 INGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGL-LFDI 140
+G + +F + R+ + P+ ++ AL ACA L LG IH KLGL ++
Sbjct: 133 QSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNV 192
Query: 141 FVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEK 200
VGN LI MY G M A VF + VSW+ +++ ++ G ++L FF + P
Sbjct: 193 VVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNP 252
Query: 201 D-------------------------------KGIWGAMISGYVQNNCFKEGLYLFRLMQ 229
D W +++GYV + E F M
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH 312
Query: 230 LTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLD 289
+ + DE +L+A A + + G +H ++ L + ++++L+DMY+KCG L
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLK 372
Query: 290 LAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEM-EKLGIKPDDITFIAVFTAC 348
A+ +F +MP ++++ WN MISG A +GD I A+KLF+++ ++ +KPD TF+ + C
Sbjct: 373 HAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVC 432
Query: 349 SYSGMASE-GLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGS 407
S+ + E L + M + Y ++P EH L+ + + G +A +I+ +G
Sbjct: 433 SHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDG- 491
Query: 408 EETLAWRAFLSACCNHGQAQLATLAAESLVRL---DNPSGLYVLISNLYAASGRHADVRR 464
+AWRA L AC + A A ++ L D LY+++SNLYA R +V +
Sbjct: 492 ---VAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQ 548
Query: 465 VRDVMKNKRVDKAPGCSSVE 484
+R +M+ V K G S ++
Sbjct: 549 IRKIMRESGVLKEVGSSWID 568
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 37/292 (12%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
+TI+ A G++ L ++ +G PD + + L+ SL +HGY +K
Sbjct: 25 STIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTK 83
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
G + + + NSL+ Y + A KVFDE+
Sbjct: 84 HGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEM--------------------------- 116
Query: 194 FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGAL 253
P+ D W +++SGYVQ+ F+EG+ LF + +D+ P+E F + L+ACA +
Sbjct: 117 ----PDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLS 172
Query: 254 DTGVWVHRYLNRARLPL-SIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISG 312
G +H L + L ++ + L+DMY KCG +D A +F M ++D V WNA+++
Sbjct: 173 PLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVAS 232
Query: 313 LAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKM 364
+ +G L F +M PD +T+ + A SG + ++L M
Sbjct: 233 CSRNGKLELGLWFFHQMP----NPDTVTYNELIDAFVKSGDFNNAFQVLSDM 280
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 134/281 (47%), Gaps = 23/281 (8%)
Query: 235 PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRL 294
PD S V +L + G + +H Y+ + + RLS SL+ Y +L+ A ++
Sbjct: 53 PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKV 112
Query: 295 FDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMA 354
FD MPD D++ WN+++SG G + LF E+ + + P++ +F A AC+ ++
Sbjct: 113 FDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLS 172
Query: 355 SEGLKLLDKMFSVYNMEPKSEHYG-CLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAW 413
G + K+ + +E + G CL+D+ + GF ++A+++ + + ++T++W
Sbjct: 173 PLGACIHSKLVKL-GLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEE-----KDTVSW 226
Query: 414 RAFLSACCNHGQAQLATLAAESLVRLDNPSGL-YVLISNLYAASGRHADVRRVRDVMKNK 472
A +++C +G+ +L ++ NP + Y + + + SG + +V M N
Sbjct: 227 NAIVASCSRNGKLELGLWFFH---QMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPN- 282
Query: 473 RVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMH 513
P SS + ++ ++ EK+ E KMH
Sbjct: 283 -----PNSSS--WNTILTGYVNSEKS----GEATEFFTKMH 312
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 212/461 (45%), Gaps = 39/461 (8%)
Query: 25 HAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLING 84
H V G+ N+ ++ ++ C++ G L A +++ + ++ +I+ + G
Sbjct: 269 HCLVVKCGMVNDISVVTSLV--CAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKG 326
Query: 85 NLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGN 144
+++ + F+ + + D + L C +G +HGY+ K GL V N
Sbjct: 327 DMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVN 386
Query: 145 SLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGI 204
LI MY +K DV+ F++ E
Sbjct: 387 GLITMY-------------------------------SKFDDVETVLFLFEQLQETPLIS 415
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTD-IGPDESIFVSILSACAHMGALDTGVWVHRYL 263
W ++ISG VQ+ +F M LT + PD S+L+ C+ + L+ G +H Y
Sbjct: 416 WNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYT 475
Query: 264 NRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGAL 323
R + T+L+DMYAKCGN A+ +F S+ WN+MISG ++ G AL
Sbjct: 476 LRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRAL 535
Query: 324 KLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDL 383
+ EM + G+KPD+ITF+ V +AC++ G EG M + + P +HY +V L
Sbjct: 536 SCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGL 595
Query: 384 LSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPS 443
L R F EA+ +I ++ + ++ W A LSAC H + ++ A + LD +
Sbjct: 596 LGRACLFTEALYLIWKM----DIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKN 651
Query: 444 -GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSV 483
GLYVL+SNLYA DV RVR++MK+ D G S +
Sbjct: 652 GGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 82 INGNLNRT-LHVFTNMLRNGLSPDNYTIPYALKACA-ALRDHSLG-EMIHGYSSKLGLLF 138
I+G ++ + + +F ++LR+ L+P+++T+ L+A + L E + + +K GL
Sbjct: 24 IHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDR 83
Query: 139 DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
++V SL+ +Y K G V A++ FDE P
Sbjct: 84 FVYVKTSLLNLY-------------------------------LKKGCVTSAQMLFDEMP 112
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVW 258
E+D +W A+I GY +N + LF +M P + V++L C G + G
Sbjct: 113 ERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS 172
Query: 259 VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGD 318
VH ++ L L ++ +L+ Y+KC L A+ LF M D+ V WN MI + G
Sbjct: 173 VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGL 232
Query: 319 GIGALKLFSEMEKLGIKPDDITFIAVFTA 347
A+ +F M + ++ +T I + +A
Sbjct: 233 QEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 168/410 (40%), Gaps = 45/410 (10%)
Query: 20 QLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKA 79
Q++Q + SGLD + + +L + +G +T A +F + + N +I
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNL--YLKKGCVTSAQMLFDEMPERDTVVWNALICG 125
Query: 80 FLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFD 139
+ NG +F ML+ G SP T+ L C S G +HG ++K GL D
Sbjct: 126 YSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELD 185
Query: 140 IFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPE 199
V N+LI+ Y ++ +A +F E+ S VSW+ MI Y++ G + A F E
Sbjct: 186 SQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFE 245
Query: 200 KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWV 259
K+ +I P +++LSA L
Sbjct: 246 KN-----------------------------VEISP--VTIINLLSAHVSHEPL------ 268
Query: 260 HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDG 319
H + + + I + TSL+ Y++CG L A+RL+ S IV +++S A GD
Sbjct: 269 HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDM 328
Query: 320 IGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC 379
A+ FS+ +L +K D + + + C S G+ L + K+
Sbjct: 329 DIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKS-GLCTKTLVVNG 387
Query: 380 LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
L+ + S+ E + + ++ + ++W + +S C G+A A
Sbjct: 388 LITMYSKFDDVETVLFLFEQLQET-----PLISWNSVISGCVQSGRASTA 432
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 7/201 (3%)
Query: 259 VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGD 318
V +L ++ L + + TSLL++Y K G + A+ LFD MP+RD V WNA+I G + +G
Sbjct: 72 VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGY 131
Query: 319 GIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYG 378
A KLF M + G P T + + C G S+G + + + + +E S+
Sbjct: 132 ECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG-RSVHGVAAKSGLELDSQVKN 190
Query: 379 CLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVR 438
L+ S+ A V+ R + + + T++W + A G + A +++
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKD-----KSTVSWNTMIGAYSQSGLQEEAITVFKNMFE 245
Query: 439 LDNPSGLYVLISNLYAASGRH 459
N V I NL +A H
Sbjct: 246 -KNVEISPVTIINLLSAHVSH 265
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 142/532 (26%), Positives = 245/532 (46%), Gaps = 78/532 (14%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
++ H+ V S L + + +++ F + L A K+F +V + N+II+A+
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARF--YALNDDLISARKLFDVFPERSVFLWNSIIRAYA 82
Query: 82 INGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIF 141
L +F+ +LR+ PDN+T + + D IHG + GL FD
Sbjct: 83 KAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI 142
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEI----------------------------------- 166
G++++ Y G +V A K+F I
Sbjct: 143 CGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRG 202
Query: 167 -----------------PSLSAVSWSL------------------MISGYAKVGDVDLAR 191
PSL V+WS+ +++ Y++ + A
Sbjct: 203 HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASAC 262
Query: 192 LFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMG 251
F+ E D ++I+GY + KE L+LF ++++ PD + +L +CA +
Sbjct: 263 SVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELS 322
Query: 252 ALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMIS 311
+G VH Y+ R L L I++ ++L+DMY+KCG L A LF +P+++IV +N++I
Sbjct: 323 DSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLIL 382
Query: 312 GLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNME 371
GL +HG A + F+E+ ++G+ PD+ITF A+ C +SG+ ++G ++ ++M S + +E
Sbjct: 383 GLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIE 442
Query: 372 PKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATL 431
P++EHY +V L+ G EEA + + + A LS C H LA +
Sbjct: 443 PQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSG----ILGALLSCCEVHENTHLAEV 498
Query: 432 AAESLVR--LDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCS 481
AE++ + + S V++SN+YA GR +V R+RD + K PG S
Sbjct: 499 VAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 208/431 (48%), Gaps = 41/431 (9%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
A VF +++ +I + N N + +F M R L P+ T+ L AC
Sbjct: 204 AFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVE 263
Query: 118 LR-DHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSL 176
L SL + IHG+S + G D + + + MYC
Sbjct: 264 LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC------------------------- 298
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPD 236
+ G+V L+R+ F+ + +D +W +MISGY + E + L M+ I +
Sbjct: 299 ------RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEAN 352
Query: 237 ESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFD 296
++I+SAC + L VH + + I L +L+DMYAKCG+L A+ +F
Sbjct: 353 SVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFY 412
Query: 297 SMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASE 356
+ ++D+V W++MI+ +HG G AL++F M K G + DD+ F+A+ +AC+++G+ E
Sbjct: 413 ELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEE 472
Query: 357 GLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAF 416
+ + Y+M EHY C ++LL R G ++A +T + W +
Sbjct: 473 AQTIFTQA-GKYHMPVTLEHYACYINLLGRFGKIDDAF----EVTINMPMKPSARIWSSL 527
Query: 417 LSACCNHGQAQLA-TLAAESLVRL--DNPSGLYVLISNLYAASGRHADVRRVRDVMKNKR 473
LSAC HG+ +A + A L++ DNP+ YVL+S ++ SG + VR VM+ ++
Sbjct: 528 LSACETHGRLDVAGKIIANELMKSEPDNPAN-YVLLSKIHTESGNYHAAEEVRRVMQRRK 586
Query: 474 VDKAPGCSSVE 484
++K G S +E
Sbjct: 587 LNKCYGFSKIE 597
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 168/375 (44%), Gaps = 44/375 (11%)
Query: 60 KVFQRIQH-PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAAL 118
KVF + H TV C +II + +G L + + M G P + + L C +
Sbjct: 103 KVFDEMLHRDTVSYC-SIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRM 161
Query: 119 RDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMI 178
G SSK+ +F V + DE S + + ++
Sbjct: 162 ----------GSSSKVARMFHALV-------------------LVDERMQESVLLSTALV 192
Query: 179 SGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDES 238
Y K D A FD+ K++ W AMISG V N ++ G+ LFR MQ ++ P+
Sbjct: 193 DMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRV 252
Query: 239 IFVSILSACAHMGALDTGV-WVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDS 297
+S+L AC + + V +H + R RL+ + + MY +CGN+ L++ LF++
Sbjct: 253 TLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFET 312
Query: 298 MPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEG 357
RD+V W++MISG A GD + L ++M K GI+ + +T +A+ +AC+ S + S
Sbjct: 313 SKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFA 372
Query: 358 LKLLDKMFSVYNMEPKSEHY---GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWR 414
+ ++ M H L+D+ ++ G A + +T ++ ++W
Sbjct: 373 STVHSQILKCGFM----SHILLGNALIDMYAKCGSLSAAREVFYELTE-----KDLVSWS 423
Query: 415 AFLSACCNHGQAQLA 429
+ ++A HG A
Sbjct: 424 SMINAYGLHGHGSEA 438
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 10/219 (4%)
Query: 206 GAMISGYVQNNCFKEGLYLFRLMQLTDIGPD--ESIFVSILSACA-HMGALDTGVWVHRY 262
G + G V + + E L L++L ++ +G + +I S++ ACA G +H
Sbjct: 14 GNKLKGLVSDQFYDEALRLYKL-KIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCL 72
Query: 263 LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGA 322
+A +S SL+ MYAK +++FD M RD V + ++I+ G A
Sbjct: 73 CLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEA 132
Query: 323 LKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSV-YNMEPKSEHYGCLV 381
+KL EM G P ++ C+ G +S+ ++ + V M+ LV
Sbjct: 133 MKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALV 192
Query: 382 DLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSAC 420
D+ + A + ++ N ++W A +S C
Sbjct: 193 DMYLKFDDHAAAFHVFDQMEVKNE-----VSWTAMISGC 226
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 222/470 (47%), Gaps = 48/470 (10%)
Query: 17 NMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTI 76
NMK Q H + GL+++ F + ++ F + G + A +VF+ + + + N +
Sbjct: 157 NMKAGIQLHCLMVKQGLESSCFPSTSLVHF--YGKCGLIVEARRVFEAVLDRDLVLWNAL 214
Query: 77 IKAFLINGNLNRTLHVFTNML--RNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKL 134
+ ++++NG ++ + M +N D +T L AC + G+ IH K+
Sbjct: 215 VSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQ----GKQIHAILFKV 270
Query: 135 GLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFF 194
FDI V +L+ MY + AR+ F+ + + VS
Sbjct: 271 SYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVS--------------------- 309
Query: 195 DETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALD 254
W AMI G+ QN +E + LF M L ++ PDE F S+LS+CA A+
Sbjct: 310 ----------WNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIW 359
Query: 255 TGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLA 314
V + + + ++ SL+ Y++ GNL A F S+ + D+V W ++I LA
Sbjct: 360 EIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALA 419
Query: 315 MHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKS 374
HG +L++F M + ++PD ITF+ V +ACS+ G+ EGL+ +M Y +E +
Sbjct: 420 SHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAED 478
Query: 375 EHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAE 434
EHY CL+DLL R GF +EA ++ NS T A AF C H + + A+
Sbjct: 479 EHYTCLIDLLGRAGFIDEASDVL----NSMPTEPSTHALAAFTGGCNIHEKRESMKWGAK 534
Query: 435 SLVRLDNPSGL-YVLISNLYAASGR--HADVRRVRDVMKNKRVDKAPGCS 481
L+ ++ + Y ++SN Y + G A + R R+ +N K PGCS
Sbjct: 535 KLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRE-RRNCYNPKTPGCS 583
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 191/439 (43%), Gaps = 50/439 (11%)
Query: 17 NMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTI 76
++ +KQ H + G+ N+ F +++L ++ A K+F + + N +
Sbjct: 51 HLSDVKQEHGFMVKQGIYNSLFLQNKLLQ--AYTKIREFDDADKLFDEMPLRNIVTWNIL 108
Query: 77 IKAFLI-NGNLNRTLHV----FTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYS 131
I + +G+ N H+ + +L +S D+ + ++ C + G +H
Sbjct: 109 IHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLM 168
Query: 132 SKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLAR 191
K GL F SL+ Y G +V AR+V
Sbjct: 169 VKQGLESSCFPSTSLVHFYGKCGLIVEARRV----------------------------- 199
Query: 192 LFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLM--QLTDIGPDESIFVSILSACAH 249
F+ ++D +W A++S YV N E L +LM D F S+LSAC
Sbjct: 200 --FEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR- 256
Query: 250 MGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAM 309
++ G +H L + I ++T+LL+MYAK +L A+ F+SM R++V WNAM
Sbjct: 257 ---IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAM 313
Query: 310 ISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYN 369
I G A +G+G A++LF +M ++PD++TF +V ++C+ E +K + M +
Sbjct: 314 IVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWE-IKQVQAMVTKKG 372
Query: 370 MEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
L+ SR G EA++ I + ++W + + A +HG A+ +
Sbjct: 373 SADFLSVANSLISSYSRNGNLSEALLCFHSIREP-----DLVSWTSVIGALASHGFAEES 427
Query: 430 TLAAESLVRLDNPSGLYVL 448
ES+++ P + L
Sbjct: 428 LQMFESMLQKLQPDKITFL 446
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 220/464 (47%), Gaps = 41/464 (8%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G + A ++F + N ++ F NG+ + L +FT+ML+ G+ ++++ A+
Sbjct: 365 GMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAV 424
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL--S 170
AC + + + E IHG+ K G F+ + +L+ M M A ++FD+ PS S
Sbjct: 425 DACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDS 484
Query: 171 AVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQL 230
+ + + +I GYA+ G D A F T + K L+L
Sbjct: 485 SKATTSIIGGYARNGLPDKAVSLFHRTLCEQK-------------------LFL------ 519
Query: 231 TDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDL 290
DE IL+ C +G + G +H Y +A I L SL+ MYAKC + D
Sbjct: 520 -----DEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDD 574
Query: 291 AKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSY 350
A ++F++M + D++ WN++IS + +G AL L+S M + IKPD IT V +A Y
Sbjct: 575 AIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRY 634
Query: 351 --SGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSE 408
S S L M ++Y++EP +EHY V +L G EEA I NS
Sbjct: 635 TESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTI----NSMPVQP 690
Query: 409 ETLAWRAFLSACCNHGQAQLATLAAESLV--RLDNPSGLYVLISNLYAASGRHADVRRVR 466
E RA L +C H +A A+ ++ + + PS Y+L SN+Y+ASG +R
Sbjct: 691 EVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSE-YILKSNIYSASGFWHRSEMIR 749
Query: 467 DVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILE 510
+ M+ + K P S + + + F A + +HPQ +I+ LE
Sbjct: 750 EEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLE 793
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 153/349 (43%), Gaps = 18/349 (5%)
Query: 23 QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLI 82
Q H + SG N+ F + +++ S K+F I V NT++ + +
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK 261
Query: 83 NGNLNRTLHVFTNMLR-NGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIF 141
G ++ +F M R G D++T+ L +C G +HG + ++GL+ ++
Sbjct: 262 EGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELS 321
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
V N+LI Y F DM +++ + + AV+++ MI+ Y G VD A F EK+
Sbjct: 322 VNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKN 381
Query: 202 KGIWGAMISGYVQNNCFKEGLYLF-----RLMQLTDIGPDESIFVSILSACAHMGALDTG 256
+ A+++G+ +N + L LF R ++LTD S + AC +
Sbjct: 382 TITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFS-----LTSAVDACGLVSEKKVS 436
Query: 257 VWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR--DIVCWNAMISGLA 314
+H + + + + T+LLDM +C + A+ +FD P ++I G A
Sbjct: 437 EQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYA 496
Query: 315 MHGDGIGALKLFSEM---EKLGIKPDDITFIAVFTACSYSGMASEGLKL 360
+G A+ LF +KL + D+++ + C G G ++
Sbjct: 497 RNGLPDKAVSLFHRTLCEQKLFL--DEVSLTLILAVCGTLGFREMGYQI 543
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 138/339 (40%), Gaps = 79/339 (23%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLN---RTLHVFTNMLRNGL-SPDNYTIPYALK 113
A VF + PTV +I F LN L VF M + GL P+ YT L
Sbjct: 133 AILVFVSLSSPTVVSYTALISGF---SRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILT 189
Query: 114 ACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMY-----CVFGDMVAARKVFDEIPS 168
AC + SLG IHG K G L +FV NSL+++Y D++ K+FDEIP
Sbjct: 190 ACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVL---KLFDEIPQ 246
Query: 169 LSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLM 228
SW+ ++S K G A FD + +
Sbjct: 247 RDVASWNTVVSSLVKEGKSHKA---FD---------------------------LFYEMN 276
Query: 229 QLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAK---- 284
++ G D ++LS+C L G +H R L + ++ +L+ Y+K
Sbjct: 277 RVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDM 336
Query: 285 ---------------------------CGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHG 317
G +D A +F ++ +++ + +NA+++G +G
Sbjct: 337 KKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNG 396
Query: 318 DGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASE 356
G+ ALKLF++M + G++ D + + AC G+ SE
Sbjct: 397 HGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSE 432
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGL-YLFRLMQLTDIGP 235
+IS Y K+G A L F + A+ISG+ + N E L FR+ + + P
Sbjct: 120 LISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQP 179
Query: 236 DESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAK--CGNLDLAKR 293
+E FV+IL+AC + G+ +H + ++ S+ +S SL+ +Y K + D +
Sbjct: 180 NEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLK 239
Query: 294 LFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKL-GIKPDDITFIAVFTACSYSG 352
LFD +P RD+ WN ++S L G A LF EM ++ G D T + ++C+ S
Sbjct: 240 LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSS 299
Query: 353 MASEGLKL 360
+ G +L
Sbjct: 300 VLLRGREL 307
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 273 RLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKL 332
RL +L+ Y K G A +F S+ +V + A+ISG + I ALK+F M K
Sbjct: 115 RLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKA 174
Query: 333 G-IKPDDITFIAVFTACSYSGMASEGLKL 360
G ++P++ TF+A+ TAC S G+++
Sbjct: 175 GLVQPNEYTFVAILTACVRVSRFSLGIQI 203
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 205/429 (47%), Gaps = 42/429 (9%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
A KVF+ ++ + NT+I ++ + V+ M G+ PD +T L A
Sbjct: 342 AHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL---AT 398
Query: 118 LRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLM 177
D + EM+ K GL I + N+LI
Sbjct: 399 SLDLDVLEMVQACIIKFGLSSKIEISNALI------------------------------ 428
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG--P 235
S Y+K G ++ A L F+ + K+ W A+ISG+ N EGL F + +++ P
Sbjct: 429 -SAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILP 487
Query: 236 DESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLF 295
D ++LS C +L G H Y+ R + +L++MY++CG + + +F
Sbjct: 488 DAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVF 547
Query: 296 DSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLG-IKPDDITFIAVFTACSYSGMA 354
+ M ++D+V WN++IS + HG+G A+ + M+ G + PD TF AV +ACS++G+
Sbjct: 548 NQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLV 607
Query: 355 SEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWR 414
EGL++ + M + + +H+ CLVDLL R G +EA ++ +I+ GS + W
Sbjct: 608 EEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLV-KISEKTIGSRVDV-WW 665
Query: 415 AFLSACCNHGQAQLATLAAESLV--RLDNPSGLYVLISNLYAASGRHADVRRVRDVMKNK 472
A SAC HG +L + A+ L+ D+PS +YV +SN+YA +G + R +
Sbjct: 666 ALFSACAAHGDLKLGKMVAKLLMEKEKDDPS-VYVQLSNIYAGAGMWKEAEETRRAINMI 724
Query: 473 RVDKAPGCS 481
K GCS
Sbjct: 725 GAMKQRGCS 733
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 149/278 (53%), Gaps = 6/278 (2%)
Query: 83 NGNLNRTLHVFTNMLR-NGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIF 141
+G L +F ++ R L PD Y++ A+ LRD G +H Y+ + GLL
Sbjct: 34 SGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSH 93
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
V N+L+++Y G++ + +K FDEI SW+ ++S K+GD++ A FD+ PE+D
Sbjct: 94 VSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERD 153
Query: 202 K-GIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVH 260
IW AMI+G ++ + + LFR M + D+ F +ILS C + G+LD G VH
Sbjct: 154 DVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDY-GSLDFGKQVH 212
Query: 261 RYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDS--MPDRDIVCWNAMISGLAMHGD 318
+ +A ++ + +L+ MY C + A +F+ + RD V +N +I GLA
Sbjct: 213 SLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR 272
Query: 319 GIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASE 356
+L +F +M + ++P D+TF++V +CS + M +
Sbjct: 273 D-ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQ 309
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 165/379 (43%), Gaps = 54/379 (14%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLING----NLNRTLHVFTNMLRNGLSPDNYTIPYALK 113
AC VF+ V + + + +I+G + +L VF ML L P + T +
Sbjct: 243 ACLVFEETD---VAVRDQVTFNVVIDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMG 299
Query: 114 ACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVS 173
+C+ ++G +HG + K G V N+ + MY F D AA KVF+ +
Sbjct: 300 SCSCA---AMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLE------ 350
Query: 174 WSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDI 233
EKD W MIS Y Q K + +++ M + +
Sbjct: 351 -------------------------EKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGV 385
Query: 234 GPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKR 293
PDE F S+L+ + L+ V + + L I +S +L+ Y+K G ++ A
Sbjct: 386 KPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSKNGQIEKADL 442
Query: 294 LFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEM--EKLGIKPDDITFIAVFTACSYS 351
LF+ ++++ WNA+ISG +G L+ FS + ++ I PD T + + C +
Sbjct: 443 LFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVST 502
Query: 352 GMASEGLKLLDKMFSVYNMEPKSEHYG-CLVDLLSRTGFFEEAMVIIRRITNSNNGSEET 410
+S L + + + + K G L+++ S+ G + ++ + +++ ++
Sbjct: 503 --SSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSE-----KDV 555
Query: 411 LAWRAFLSACCNHGQAQLA 429
++W + +SA HG+ + A
Sbjct: 556 VSWNSLISAYSRHGEGENA 574
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 182/431 (42%), Gaps = 64/431 (14%)
Query: 2 SSCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKV 61
S S L+L E+ N+ LK+ ++ + + + LS G + YA +V
Sbjct: 92 SHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKL------GDIEYAFEV 145
Query: 62 FQRI-QHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRD 120
F ++ + V I N +I +G ++ +F M + G+ D + L C D
Sbjct: 146 FDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC----D 201
Query: 121 HS---LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDE--IPSLSAVSWS 175
+ G+ +H K G V N+LI MY +V A VF+E + V+++
Sbjct: 202 YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFN 261
Query: 176 LMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGP 235
++I G A G+ ++ E L +FR M + P
Sbjct: 262 VVIDGLA----------------------------GFKRD----ESLLVFRKMLEASLRP 289
Query: 236 DESIFVSILSAC--AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKR 293
+ FVS++ +C A MG G+ + + L +S + + MY+ + A +
Sbjct: 290 TDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTL-----VSNATMTMYSSFEDFGAAHK 344
Query: 294 LFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGM 353
+F+S+ ++D+V WN MIS G A+ ++ M +G+KPD+ TF ++ + +
Sbjct: 345 VFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLA----TSL 400
Query: 354 ASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAW 413
+ L+++ + + K E L+ S+ G E+A ++ R N ++W
Sbjct: 401 DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKN-----LISW 455
Query: 414 RAFLSACCNHG 424
A +S ++G
Sbjct: 456 NAIISGFYHNG 466
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 141/331 (42%), Gaps = 41/331 (12%)
Query: 10 TLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPT 69
+LL ++ L+ A + GL ++ +S L ++ G + A +F+R
Sbjct: 394 SLLATSLDLDVLEMVQACIIKFGL-SSKIEISNAL-ISAYSKNGQIEKADLLFERSLRKN 451
Query: 70 VCICNTIIKAFLINGNLNRTLHVFTNMLRNGLS--PDNYTIPYALKACAALRDHSLGEMI 127
+ N II F NG L F+ +L + + PD YT+ L C + LG
Sbjct: 452 LISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQT 511
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
H Y + G + +GN+LI MY G + + +VF+++ VSW+ +IS Y++ G+
Sbjct: 512 HAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEG 571
Query: 188 DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
+ A + ++ K I PD + F ++LSAC
Sbjct: 572 ENAVNTYKTMQDEGKVI------------------------------PDAATFSAVLSAC 601
Query: 248 AHMGALDTGVWVHRYLNRAR-LPLSIRLSTSLLDMYAKCGNLDLAKRLF---DSMPDRDI 303
+H G ++ G+ + + + ++ + L+D+ + G+LD A+ L + +
Sbjct: 602 SHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRV 661
Query: 304 VCWNAMISGLAMHGD---GIGALKLFSEMEK 331
W A+ S A HGD G KL E EK
Sbjct: 662 DVWWALFSACAAHGDLKLGKMVAKLLMEKEK 692
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 217/465 (46%), Gaps = 42/465 (9%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
A +VF + N+I+ F+ N + L +F M++ + D T+ L+ C
Sbjct: 281 AFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKF 340
Query: 118 LRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLM 177
+ IHG + G + +SLI Y + A V D + VS S M
Sbjct: 341 FEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTM 400
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDE 237
ISG A G D E + +F M+ T P+
Sbjct: 401 ISGLAHAGRSD-------------------------------EAISIFCHMRDT---PNA 426
Query: 238 SIFVSILSACAHMGALDTGVWVHRYLNRARLPLS-IRLSTSLLDMYAKCGNLDLAKRLFD 296
+S+L+AC+ L T W H R L ++ I + TS++D YAKCG +++A+R FD
Sbjct: 427 ITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFD 486
Query: 297 SMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASE 356
+ +++I+ W +IS A++G AL LF EM++ G P+ +T++A +AC++ G+ +
Sbjct: 487 QITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKK 546
Query: 357 GLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAF 416
GL + M + +P +HY C+VD+LSR G + A+ +I+ + AW A
Sbjct: 547 GLMIFKSMVE-EDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGAS--AWGAI 603
Query: 417 LSACCNHGQAQLAT--LAAESLVRLDNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRV 474
LS C N + + T + AE L S Y+L S+ +AA DV +R ++K ++V
Sbjct: 604 LSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKV 663
Query: 475 DKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMH--LQLD 517
G S V + F+AG+K E++ +++ +H ++LD
Sbjct: 664 RVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMKLD 708
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 178/410 (43%), Gaps = 54/410 (13%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
++ H V SG S + +L C + SL+ A K+F + V + +I++++
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSIL--CMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYV 201
Query: 82 INGNLNRTLHVFTNMLRNGLS-PDNYTIPYALKACAALRDHSLGEMIHGYSSKLGL-LFD 139
+ L +F M+ + PD T+ LKAC + D +G +HG+S + G L D
Sbjct: 202 QSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLAD 261
Query: 140 IFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPE 199
+FV NSLI MY +K DVD A FDET
Sbjct: 262 VFVCNSLIDMY-------------------------------SKGFDVDSAFRVFDETTC 290
Query: 200 KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWV 259
++ W ++++G+V N + E L +F LM + DE VS+L C +
Sbjct: 291 RNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSI 350
Query: 260 HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDG 319
H + R + +SL+D Y C +D A + DSM +D+V + MISGLA G
Sbjct: 351 HGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRS 410
Query: 320 IGALKLFSEMEKLGIKPDDITFIAVFTACSYSG-----MASEGLKLLDKMFSVYNMEPKS 374
A+ +F M P+ IT I++ ACS S + G+ + + ++ ++ +
Sbjct: 411 DEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIA-IRRSLAINDISVGT 466
Query: 375 EHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
+VD ++ G E A +IT N ++W +SA +G
Sbjct: 467 S----IVDAYAKCGAIEMARRTFDQITEKN-----IISWTVIISAYAING 507
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 141/312 (45%), Gaps = 45/312 (14%)
Query: 9 LTLLEKCKNMKQ---LKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRI 65
++LL CK +Q K H + G ++N ALS ++ ++ + A V +
Sbjct: 332 VSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLID--AYTSCSLVDDAGTVLDSM 389
Query: 66 QHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGE 125
+ V C+T+I G + + +F +M R+ +P+ T+ L AC+ D +
Sbjct: 390 TYKDVVSCSTMISGLAHAGRSDEAISIFCHM-RD--TPNAITVISLLNACSVSADLRTSK 446
Query: 126 MIHGYSSKLGL-LFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKV 184
HG + + L + DI VG S++ Y G + AR+ FD+I + +SW+++IS YA
Sbjct: 447 WAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAIN 506
Query: 185 GDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSIL 244
G D A FDE +K GY P+ +++ L
Sbjct: 507 GLPDKALALFDEMKQK----------GYT---------------------PNAVTYLAAL 535
Query: 245 SACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI- 303
SAC H G + G+ + + + S++ + ++DM ++ G +D A L ++P+ D+
Sbjct: 536 SACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPE-DVK 594
Query: 304 ---VCWNAMISG 312
W A++SG
Sbjct: 595 AGASAWGAILSG 606
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 55/275 (20%)
Query: 77 IKAFLINGNLNRTLHVFTNMLRNGLS-PDNYTIPYALKACAALRDHSLGEMIHGYSSKLG 135
IK ++G + ++ + R G+ D + P KACA KL
Sbjct: 16 IKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACA----------------KLS 59
Query: 136 LLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFD 195
LF GNS+ Y GD+ + + FD + S +VSW++++ G G F+
Sbjct: 60 WLFQ---GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYG--------FE 108
Query: 196 ETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDT 255
E EGL+ F +++ P+ S V ++ AC +
Sbjct: 109 E-----------------------EGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWF--D 143
Query: 256 GVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAM 315
G +H Y+ R+ + S+L MYA +L A++LFD M +RD++ W+ +I
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQ 202
Query: 316 HGDGIGALKLFSEM-EKLGIKPDDITFIAVFTACS 349
+ + LKLF EM + +PD +T +V AC+
Sbjct: 203 SKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 200/417 (47%), Gaps = 14/417 (3%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
+Q H + +G + + ++ F + G+L + F I+ + N ++ +
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDF--YAKCGNLEDSRLCFDYIRDKNIVCWNALLSGY- 392
Query: 82 INGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIF 141
N + L +F ML+ G P YT ALK+C L H ++G + +
Sbjct: 393 ANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQL----HSVIVRMGYEDNDY 448
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISG-YAKVGDVDLARLFFDETPEK 200
V +SL+ Y M A + D ++V +++G Y++ G + +
Sbjct: 449 VLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQP 508
Query: 201 DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVH 260
D W I+ +++ +E + LF+ M ++I PD+ FVSILS C+ + L G +H
Sbjct: 509 DTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIH 568
Query: 261 RYLNRARLPLS-IRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDG 319
+ + + + L+DMY KCG++ ++F+ +++++ W A+IS L +HG G
Sbjct: 569 GLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYG 628
Query: 320 IGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC 379
AL+ F E LG KPD ++FI++ TAC + GM EG+ L KM Y +EP+ +HY C
Sbjct: 629 QEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRC 687
Query: 380 LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESL 436
VDLL+R G+ +EA +IR + + WR FL C + Q TL S
Sbjct: 688 AVDLLARNGYLKEAEHLIREMPFPADAP----VWRTFLDGCNRFAEEQRNTLNVVSF 740
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 178/422 (42%), Gaps = 47/422 (11%)
Query: 7 RCLTLLEKCK---NMKQLKQAHAQVFT--SGLDNNSFALSRVLAFCSHPHQGSLTYACKV 61
R ++LL C+ + + K HA T S L + + +++ + G ++ A KV
Sbjct: 14 RVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISL--YEKLGEVSLAGKV 71
Query: 62 FQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDH 121
F ++ NTIIK + G++++ VF+ M G P+ T+ L +CA+L D
Sbjct: 72 FDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVS-GLLSCASL-DV 129
Query: 122 SLGEMIHGYSSKLGLLF-DIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISG 180
G +HG S K GL D FVG L+ +Y
Sbjct: 130 RAGTQLHGLSLKYGLFMADAFVGTCLLCLY------------------------------ 159
Query: 181 YAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIF 240
++ +++A F++ P K W M+S KE ++ FR + ES F
Sbjct: 160 -GRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSF 218
Query: 241 VSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD 300
+ +L + + LD +H + L I + SL+ Y KCGN +A+R+F
Sbjct: 219 LGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGS 278
Query: 301 RDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL 360
DIV WNA+I A + + ALKLF M + G P+ T+++V S + S G +
Sbjct: 279 WDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCG-RQ 337
Query: 361 LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSAC 420
+ M E L+D ++ G E++ + I + N + W A LS
Sbjct: 338 IHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKN-----IVCWNALLSGY 392
Query: 421 CN 422
N
Sbjct: 393 AN 394
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 167/331 (50%), Gaps = 11/331 (3%)
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPD 236
+I+ Y++ D+ A + F + W ++ISG+ N +E +L + M L+ P+
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 237 ESIFVSILSACAHMGALDTGVWVHRY-LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLF 295
SIL A +G L G H Y L R + L SL+DMYAK G + AKR+F
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 296 DSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMAS 355
DSM RD V + ++I G G G AL F +M++ GIKPD +T +AV +ACS+S +
Sbjct: 483 DSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVR 542
Query: 356 EGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRA 415
EG L KM V+ + + EHY C+VDL R G+ ++A I I + +
Sbjct: 543 EGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSA----MCAT 598
Query: 416 FLSACCNHGQAQLATLAAESLVRLDNPS--GLYVLISNLYAASGRHADVRRVRDVMKNKR 473
L AC HG + AA+ L+ P G Y+L++++YA +G + + V+ ++ +
Sbjct: 599 LLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLG 658
Query: 474 VDKAPGCSSVEIDGVVMEFIAGEKTHPQMDE 504
V KA + +E D + GE P D+
Sbjct: 659 VQKAHEFALMETDSE----LDGENNKPMNDD 685
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 181/399 (45%), Gaps = 33/399 (8%)
Query: 10 TLLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
+LL C + +Q HA +SGL+ +S + +++ F S + I
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
HP N +I +++ N ++ V+ M+ G+ D +T P +KACAAL D + G +
Sbjct: 148 HPLPW--NVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYA---K 183
+HG +++V N+LI+MY FG + AR++FD + AVSW+ +I+ Y K
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 184 VGDVD--LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRL-----MQLTDIGPD 236
+G+ L R++ E W + G C + G Y+ L M+ ++
Sbjct: 266 LGEAFKLLDRMYLSGV-EASIVTWNTIAGG-----CLEAGNYIGALNCVVGMRNCNVRIG 319
Query: 237 ESIFVSILSACAHMGALDTGVWVHRYLNRA-RLPLSI-RLSTSLLDMYAKCGNLDLAKRL 294
++ L AC+H+GAL G H + R+ I + SL+ MY++C +L A +
Sbjct: 320 SVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIV 379
Query: 295 FDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMA 354
F + + WN++ISG A + L EM G P+ IT ++ + G
Sbjct: 380 FQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNL 439
Query: 355 SEGLKLLDKMFSVYNMEPKSEH-----YGCLVDLLSRTG 388
G K F Y + +S + LVD+ +++G
Sbjct: 440 QHG-----KEFHCYILRRQSYKDCLILWNSLVDMYAKSG 473
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 38/273 (13%)
Query: 29 FTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNR 88
F+ +DN +L + + CS L +A VFQ+++ ++ N+II F N
Sbjct: 352 FSHDIDNVRNSLITMYSRCS-----DLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEE 406
Query: 89 TLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIA 148
T + ML +G P++ T+ L A + + G+ H Y
Sbjct: 407 TSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY------------------ 448
Query: 149 MYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAM 208
+ R+ + + L W+ ++ YAK G++ A+ FD ++DK + ++
Sbjct: 449 --------ILRRQSYKDCLIL----WNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSL 496
Query: 209 ISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARL 268
I GY + + L F+ M + I PD V++LSAC+H + G W+ +
Sbjct: 497 IDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHV-F 555
Query: 269 PLSIRLS--TSLLDMYAKCGNLDLAKRLFDSMP 299
+ +RL + ++D+Y + G LD A+ +F ++P
Sbjct: 556 GIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 167/331 (50%), Gaps = 11/331 (3%)
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPD 236
+I+ Y++ D+ A + F + W ++ISG+ N +E +L + M L+ P+
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 237 ESIFVSILSACAHMGALDTGVWVHRY-LNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLF 295
SIL A +G L G H Y L R + L SL+DMYAK G + AKR+F
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 296 DSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMAS 355
DSM RD V + ++I G G G AL F +M++ GIKPD +T +AV +ACS+S +
Sbjct: 483 DSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVR 542
Query: 356 EGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRA 415
EG L KM V+ + + EHY C+VDL R G+ ++A I I + +
Sbjct: 543 EGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSA----MCAT 598
Query: 416 FLSACCNHGQAQLATLAAESLVRLDNPS--GLYVLISNLYAASGRHADVRRVRDVMKNKR 473
L AC HG + AA+ L+ P G Y+L++++YA +G + + V+ ++ +
Sbjct: 599 LLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLG 658
Query: 474 VDKAPGCSSVEIDGVVMEFIAGEKTHPQMDE 504
V KA + +E D + GE P D+
Sbjct: 659 VQKAHEFALMETDSE----LDGENNKPMNDD 685
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 181/399 (45%), Gaps = 33/399 (8%)
Query: 10 TLLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
+LL C + +Q HA +SGL+ +S + +++ F S + I
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
HP N +I +++ N ++ V+ M+ G+ D +T P +KACAAL D + G +
Sbjct: 148 HPLPW--NVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYA---K 183
+HG +++V N+LI+MY FG + AR++FD + AVSW+ +I+ Y K
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 184 VGDVD--LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRL-----MQLTDIGPD 236
+G+ L R++ E W + G C + G Y+ L M+ ++
Sbjct: 266 LGEAFKLLDRMYLSGV-EASIVTWNTIAGG-----CLEAGNYIGALNCVVGMRNCNVRIG 319
Query: 237 ESIFVSILSACAHMGALDTGVWVHRYLNRA-RLPLSI-RLSTSLLDMYAKCGNLDLAKRL 294
++ L AC+H+GAL G H + R+ I + SL+ MY++C +L A +
Sbjct: 320 SVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIV 379
Query: 295 FDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMA 354
F + + WN++ISG A + L EM G P+ IT ++ + G
Sbjct: 380 FQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNL 439
Query: 355 SEGLKLLDKMFSVYNMEPKSEH-----YGCLVDLLSRTG 388
G K F Y + +S + LVD+ +++G
Sbjct: 440 QHG-----KEFHCYILRRQSYKDCLILWNSLVDMYAKSG 473
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 38/273 (13%)
Query: 29 FTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNR 88
F+ +DN +L + + CS L +A VFQ+++ ++ N+II F N
Sbjct: 352 FSHDIDNVRNSLITMYSRCS-----DLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEE 406
Query: 89 TLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIA 148
T + ML +G P++ T+ L A + + G+ H Y
Sbjct: 407 TSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY------------------ 448
Query: 149 MYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAM 208
+ R+ + + L W+ ++ YAK G++ A+ FD ++DK + ++
Sbjct: 449 --------ILRRQSYKDCLIL----WNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSL 496
Query: 209 ISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARL 268
I GY + + L F+ M + I PD V++LSAC+H + G W+ +
Sbjct: 497 IDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHV-F 555
Query: 269 PLSIRLS--TSLLDMYAKCGNLDLAKRLFDSMP 299
+ +RL + ++D+Y + G LD A+ +F ++P
Sbjct: 556 GIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 217/478 (45%), Gaps = 41/478 (8%)
Query: 22 KQAHAQVFTSGLDN-NSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAF 80
+Q H SG+ N + V+ + G YA VF ++ V N +I +
Sbjct: 153 EQIHGNAICSGVSRYNLVVWNSVMDM--YRRLGVFDYALSVFLTMEDRDVVSWNCLILSC 210
Query: 81 LINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDI 140
+GN L F M + PD YT+ + C+ LR+ S G+ K+G
Sbjct: 211 SDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMG----- 265
Query: 141 FVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEK 200
F+ NS++ L A I ++K +D + F E +
Sbjct: 266 FLSNSIV---------------------LGA-----GIDMFSKCNRLDDSVKLFRELEKW 299
Query: 201 DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVH 260
D + +MI Y + C ++ L LF L + PD+ F S+LS+ + LD G VH
Sbjct: 300 DSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVH 358
Query: 261 RYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGI 320
+ + L ++TSL++MY K G++DLA +F +D++ WN +I GLA + +
Sbjct: 359 SLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAV 418
Query: 321 GALKLFSEM-EKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC 379
+L +F+++ +KPD +T + + AC Y+G +EG+++ M + + P +EHY C
Sbjct: 419 ESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYAC 478
Query: 380 LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRL 439
+++LL R G EA I +I + W L A + G +LA A++++
Sbjct: 479 IIELLCRVGMINEAKDIADKIPFEPSSH----IWEPILCASLDLGDTRLAETVAKTMLES 534
Query: 440 DNPSGL-YVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGE 496
+ S Y+++ +Y + R + ++R M ++ A G S + I+ V F A +
Sbjct: 535 EPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQ 592
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 156/331 (47%), Gaps = 22/331 (6%)
Query: 119 RDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMI 178
+ +L +++H + G + + GN + +Y G ++ A ++FD+IP + ++W++ +
Sbjct: 18 KSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCL 77
Query: 179 SGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDES 238
G K G ++ A FDE PE+D W MISG V + G+ +F MQ +I P E
Sbjct: 78 KGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEF 137
Query: 239 IF--VSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFD 296
F ++ L C G G + ++R L + S++DMY + G D A +F
Sbjct: 138 TFSILASLVTCVRHGEQIHGNAICSGVSRYNLV----VWNSVMDMYRRLGVFDYALSVFL 193
Query: 297 SMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASE 356
+M DRD+V WN +I + G+ AL F M ++ I+PD+ T V + CS S+
Sbjct: 194 TMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSK 253
Query: 357 G---LKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSN----NGSEE 409
G L L KM + N S G +D+ S+ ++++ + R + + N
Sbjct: 254 GKQALALCIKMGFLSN----SIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIG 309
Query: 410 TLAWRAFLSACCNHGQAQLATLAAESLVRLD 440
+ +W CC +L LA VR D
Sbjct: 310 SYSWH-----CCGEDALRLFILAMTQSVRPD 335
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 196/420 (46%), Gaps = 26/420 (6%)
Query: 17 NMKQLKQAHAQVFTSGLDNN---SFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCIC 73
+++ L+Q H V G N ++ V C ++ A +VF I +P+
Sbjct: 177 DLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCR-----VMSDARRVFDEIVNPSDVSW 231
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
N I++ +L G + + +F ML + P N+T+ + AC+ +G++IH + K
Sbjct: 232 NVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVK 291
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
L ++ D V S+ MY + +AR+VFD+ S SW+ +SGYA G AR
Sbjct: 292 LSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREAREL 351
Query: 194 FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGAL 253
FD PE++ W AM+ GYV + + E L LM+ D V IL+ C+ + +
Sbjct: 352 FDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDV 411
Query: 254 DTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD-RDIVCWNAMISG 312
G H ++ R ++ ++ +LLDMY KCG L A F M + RD V WNA+++G
Sbjct: 412 QMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTG 471
Query: 313 LAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYS-----GMASEGLKLLDKMFSV 367
+A G AL F M+ + KP T + C+ G A G + D
Sbjct: 472 VARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDG---- 526
Query: 368 YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
Y ++ G +VD+ S+ F+ A+ + + + + + W + + CC +G+++
Sbjct: 527 YKIDVVIR--GAMVDMYSKCRCFDYAIEVFK-----EAATRDLILWNSIIRGCCRNGRSK 579
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 171/376 (45%), Gaps = 39/376 (10%)
Query: 14 KCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCIC 73
KC ++ ++ Q + L + + A+S + G A ++F + +
Sbjct: 310 KCDRLESARRVFDQTRSKDLKSWTSAMS------GYAMSGLTREARELFDLMPERNIVSW 363
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
N ++ ++ + L T M + + DN T+ + L C+ + D +G+ HG+ +
Sbjct: 364 NAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR 423
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLF 193
G ++ V N+L+ MY K G + A ++
Sbjct: 424 HGYDTNVIVANALLDMY-------------------------------GKCGTLQSANIW 452
Query: 194 FDETPE-KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGA 252
F + E +D+ W A+++G + ++ L F MQ+ + P + ++L+ CA++ A
Sbjct: 453 FRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPA 511
Query: 253 LDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISG 312
L+ G +H +L R + + + +++DMY+KC D A +F RD++ WN++I G
Sbjct: 512 LNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRG 571
Query: 313 LAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEP 372
+G +LF +E G+KPD +TF+ + AC G G + M + Y++ P
Sbjct: 572 CCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISP 631
Query: 373 KSEHYGCLVDLLSRTG 388
+ EHY C+++L + G
Sbjct: 632 QVEHYDCMIELYCKYG 647
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/472 (22%), Positives = 188/472 (39%), Gaps = 77/472 (16%)
Query: 3 SCSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVF 62
SCS + L + Q ++ + + T F L+R + ++ G + A ++F
Sbjct: 70 SCSSKALVV--------QARKVQSHLVTFSPLPPIFLLNRAIE--AYGKCGCVDDARELF 119
Query: 63 QRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHS 122
+ + N +I A NG + +F M R+G+ + LK+C + D
Sbjct: 120 EEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLR 179
Query: 123 LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYA 182
L +H K G ++ + S++ +Y M AR+VFDEI + S VSW++++ Y
Sbjct: 180 LLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYL 239
Query: 183 KVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVS 242
++G D A + F F++++L ++ P S
Sbjct: 240 EMGFNDEAVVMF------------------------------FKMLEL-NVRPLNHTVSS 268
Query: 243 ILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKR--------- 293
++ AC+ AL+ G +H + + +STS+ DMY KC L+ A+R
Sbjct: 269 VMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKD 328
Query: 294 ----------------------LFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEK 331
LFD MP+R+IV WNAM+ G + AL + M +
Sbjct: 329 LKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQ 388
Query: 332 LGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFE 391
D++T + + CS G K + + L+D+ + G +
Sbjct: 389 EIENIDNVTLVWILNVCSGISDVQMG-KQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQ 447
Query: 392 EAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPS 443
A + R+++ + ++W A L+ G+++ A E + PS
Sbjct: 448 SANIWFRQMSE----LRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPS 495
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 191/418 (45%), Gaps = 47/418 (11%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNG-LSPDNYTIPYALKACAALRDHSLGEMIHGYSS 132
N++I +G+ +L F M R G + D T+ + A L G HG +
Sbjct: 549 NSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAI 608
Query: 133 KLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEI--PSLSAVSWSLMISGYAKVGDVDLA 190
K D + N+LI MY D+ +A KVF I P+L +
Sbjct: 609 KSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCS------------------- 649
Query: 191 RLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHM 250
W +IS QN +E LFR ++L P+E FV +LSA +
Sbjct: 650 --------------WNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQL 692
Query: 251 GALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMI 310
G+ G+ H +L R + +S +L+DMY+ CG L+ ++F + I WN++I
Sbjct: 693 GSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVI 752
Query: 311 SGLAMHGDGIGALKLFSEMEKLG-IKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYN 369
S HG G A++LF E+ ++P+ +FI++ +ACS+SG EGL +M +
Sbjct: 753 SAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFG 812
Query: 370 MEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
++P +EH +VD+L R G EA I I W A LSAC HG +L
Sbjct: 813 VKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAG----VWGALLSACNYHGDTKLG 868
Query: 430 TLAAESLVRL--DNPSGLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEI 485
AE L + DN S Y+ ++N Y G + R+R ++++ + K PG S +++
Sbjct: 869 KEVAEVLFEMEPDNAS-YYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 141/304 (46%), Gaps = 37/304 (12%)
Query: 54 SLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALK 113
+L+ A VF ++H + NTI+ L NG+ ++L F +M +G D T +
Sbjct: 238 NLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVIS 297
Query: 114 ACAALRDHSLGEMIHGYSSKLGLLFD--IFVGNSLIAMYCVFGDMVAARKVFDEIPSLSA 171
AC+++ + +LGE +HG K G + + VGNS+I+MY
Sbjct: 298 ACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMY--------------------- 336
Query: 172 VSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
+K GD + A F+E +D A+++G+ N F+E + MQ
Sbjct: 337 ----------SKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSV 386
Query: 232 D-IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARL-PLSIRLSTSLLDMYAKCGNLD 289
D I PD + VSI S C + G VH Y R + ++ + S++DMY KCG
Sbjct: 387 DKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTT 446
Query: 290 LAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEM--EKLGIKPDDITFIAVFTA 347
A+ LF + RD+V WN+MIS + +G A LF E+ E K T +A+ T+
Sbjct: 447 QAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTS 506
Query: 348 CSYS 351
C S
Sbjct: 507 CDSS 510
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 169/438 (38%), Gaps = 74/438 (16%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLR-NGLSPDNYTIPYA 111
G A VF+ + V N I+ F NG + M + + PD T+
Sbjct: 340 GDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSI 399
Query: 112 LKACAALRDHSLGEMIHGYSSKLGLLFDIF-VGNSLIAMYCVFGDMVAARKVFDEIPSLS 170
C L G +HGY+ ++ + V NS+I MY G A +F
Sbjct: 400 TSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRD 459
Query: 171 AVSWSLMISGYA------------------------------------------------ 182
VSW+ MIS ++
Sbjct: 460 LVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSV 519
Query: 183 -----KVGDVDLARLFFDETPE-KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT-DIGP 235
K+GD+ A L + E +D W ++ISG + E L F+ M I
Sbjct: 520 HCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRH 579
Query: 236 DESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLF 295
D + +SA ++G + G H ++ L +L +L+ MY +C +++ A ++F
Sbjct: 580 DLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVF 639
Query: 296 DSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMAS 355
+ D ++ WN +IS L+ + G +LF L ++P++ITF+ + +A + G S
Sbjct: 640 GLISDPNLCSWNCVISALSQNKAGREVFQLF---RNLKLEPNEITFVGLLSASTQLGSTS 696
Query: 356 EGLK----LLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETL 411
G++ L+ + F + LVD+ S G E M + R N+G
Sbjct: 697 YGMQAHCHLIRRGFQANPFVSAA-----LVDMYSSCGMLETGMKVFR-----NSGVNSIS 746
Query: 412 AWRAFLSACCNHGQAQLA 429
AW + +SA HG + A
Sbjct: 747 AWNSVISAHGFHGMGEKA 764
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 173/406 (42%), Gaps = 41/406 (10%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
+ H GL + S++L F + G L + +F ++ V + N++I A
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTF--YGRTGELVSSSCLFDELKEKDVIVWNSMITALN 164
Query: 82 INGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIF 141
NG + +F M+ G D+ T+ A A ++L M+H + + GL+ D
Sbjct: 165 QNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSS 224
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
+ N+L+ +Y AK ++ A F +D
Sbjct: 225 LCNALMNLY-------------------------------AKGENLSSAECVFTHMEHRD 253
Query: 202 KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHR 261
W +++ + N ++ L F+ M + D F ++SAC+ + L G +H
Sbjct: 254 IVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHG 313
Query: 262 YLNRARLPLSIRLST--SLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDG 319
+ ++ +S S++ MY+KCG+ + A+ +F+ + RD++ NA+++G A +G
Sbjct: 314 LVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMF 373
Query: 320 IGALKLFSEMEKL-GIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYG 378
A + ++M+ + I+PD T +++ + C + EG + + E
Sbjct: 374 EEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVIN 433
Query: 379 CLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
++D+ + G +A ++ + T+ + ++W + +SA +G
Sbjct: 434 SVIDMYGKCGLTTQAELLFKTTTH-----RDLVSWNSMISAFSQNG 474
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 121/306 (39%), Gaps = 52/306 (16%)
Query: 58 ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
A KVF I P +C N +I A N +F N+ L P+ T L A
Sbjct: 635 AVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQ 691
Query: 118 LRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLM 177
L S G H + + G + FV +L+ MY G + KVF S +W+ +
Sbjct: 692 LGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSV 751
Query: 178 ISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDE 237
IS + G + A F E L +++ P++
Sbjct: 752 ISAHGFHGMGEKAMELFKE------------------------------LSSNSEMEPNK 781
Query: 238 SIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTS----LLDMYAKCGNLDLAKR 293
S F+S+LSAC+H G +D G+ Y + ++ T ++DM + G L A
Sbjct: 782 SSFISLLSACSHSGFIDEGL---SYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYE 838
Query: 294 LFDSM--PDRDIVCWNAMISGLAMHGD---GIGALKLFSEMEKLGIKPDDITFIAVFTAC 348
+ P + V W A++S HGD G ++ EME PD+ ++ + A
Sbjct: 839 FITGIGEPQKAGV-WGALLSACNYHGDTKLGKEVAEVLFEME-----PDNASYY-ISLAN 891
Query: 349 SYSGMA 354
+Y G+
Sbjct: 892 TYVGLG 897
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 213/467 (45%), Gaps = 38/467 (8%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
KQ H+ V SG + ++ ++ VL + G L+ + + F + V N+I+
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVD-YYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCA 291
Query: 82 INGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIF 141
G++ +L +F+ M G P L C+ D G+ IH Y K+G
Sbjct: 292 DYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGF----- 346
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
++ SL S +I Y K ++ + L + P +
Sbjct: 347 -----------------------DVSSLHV--QSALIDMYGKCNGIENSALLYQSLPCLN 381
Query: 202 KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHM--GALDTGVWV 259
++++ + K+ + +F LM G DE ++L A + +L + V
Sbjct: 382 LECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLV 441
Query: 260 HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDG 319
H ++ + +S SL+D Y K G ++++++FD + +I C ++I+G A +G G
Sbjct: 442 HCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMG 501
Query: 320 IGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC 379
+K+ EM+++ + PD++T ++V + CS+SG+ EG + D + S Y + P + Y C
Sbjct: 502 TDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYAC 561
Query: 380 LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRL 439
+VDLL R G E+A R+ G + +AW + L +C H + AAE L+ L
Sbjct: 562 MVDLLGRAGLVEKA----ERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNL 617
Query: 440 DNPS-GLYVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEI 485
+ + +Y+ +S Y G R++R++ ++ + + G SSV +
Sbjct: 618 EPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVV 664
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 143/331 (43%), Gaps = 35/331 (10%)
Query: 23 QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLI 82
Q H +V + G N F S ++ + + A K+F + + +CN +++ F
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGL--YACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQ 190
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGL-LFDIF 141
G R V+ M G++ + T Y ++ C+ R G+ +H K G + +IF
Sbjct: 191 TGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIF 250
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
V N L+ Y GD+ + + F+ +P +SW+ ++S A G V
Sbjct: 251 VANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSV-------------- 296
Query: 202 KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHR 261
+ L LF MQ P F+S L+ C+ + +G +H
Sbjct: 297 -----------------LDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHC 339
Query: 262 YLNRARLPL-SIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGI 320
Y+ + + S+ + ++L+DMY KC ++ + L+ S+P ++ C N++++ L G
Sbjct: 340 YVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITK 399
Query: 321 GALKLFSEMEKLGIKPDDITFIAVFTACSYS 351
+++F M G D++T V A S S
Sbjct: 400 DIIEMFGLMIDEGTGIDEVTLSTVLKALSLS 430
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 130/298 (43%), Gaps = 32/298 (10%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYAL 112
G+L A + F + V N +I G R + ++ M+ GL T P L
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV 172
C+ G +H LG ++FV ++L+ +Y
Sbjct: 120 SVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLY---------------------- 157
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD 232
A + VD+A FDE +++ + ++ + Q K ++ M+L
Sbjct: 158 ---------ACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEG 208
Query: 233 IGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLS-IRLSTSLLDMYAKCGNLDLA 291
+ + + ++ C+H + G +H + ++ +S I ++ L+D Y+ CG+L +
Sbjct: 209 VAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGS 268
Query: 292 KRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
R F+++P++D++ WN+++S A +G + +L LFS+M+ G +P F++ CS
Sbjct: 269 MRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCS 326
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 134/316 (42%), Gaps = 44/316 (13%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSF----ALSRVLAFCSHPHQGSLTYACKVFQR 64
L + +++ KQ H V G D +S AL + C+ +L Y Q
Sbjct: 322 LNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLY-----QS 376
Query: 65 IQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLG 124
+ + CN+++ + + G + +F M+ G D T+ LKA + SL
Sbjct: 377 LPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLH 436
Query: 125 E--MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYA 182
++H + K G D+ V SLI Y G +RKVFDE+ + + + +I+GYA
Sbjct: 437 SCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYA 496
Query: 183 KVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVS 242
+ G + +C K + R M ++ PDE +S
Sbjct: 497 RNG---------------------------MGTDCVK----MLREMDRMNLIPDEVTILS 525
Query: 243 ILSACAHMGALDTGVWVHRYL-NRARLPLSIRLSTSLLDMYAKCGNLDLAKR-LFDSMPD 300
+LS C+H G ++ G + L ++ + +L ++D+ + G ++ A+R L + D
Sbjct: 526 VLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGD 585
Query: 301 RDIVCWNAMISGLAMH 316
D V W++++ +H
Sbjct: 586 ADCVAWSSLLQSCRIH 601
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 117/266 (43%), Gaps = 13/266 (4%)
Query: 163 FDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGL 222
+E PS + + I K G++ A FDE +D + +ISG + C +
Sbjct: 38 LEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAI 97
Query: 223 YLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMY 282
L+ M + S F S+LS C+ G+ VH + ++ + ++L+ +Y
Sbjct: 98 ELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLY 157
Query: 283 AKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFI 342
A +D+A +LFD M DR++ N ++ G+ +++ ME G+ + +T+
Sbjct: 158 ACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYC 217
Query: 343 AVFTACSYSGMASEGLKL----LDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIR 398
+ CS+ + EG +L + +++ N+ + LVD S G +M
Sbjct: 218 YMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVAN----VLVDYYSACGDLSGSMRSFN 273
Query: 399 RITNSNNGSEETLAWRAFLSACCNHG 424
+ ++ ++W + +S C ++G
Sbjct: 274 AVPE-----KDVISWNSIVSVCADYG 294
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 173/387 (44%), Gaps = 36/387 (9%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTS-GLDNNSFALSRVL-AFCSHPHQGSLTYACKVFQRIQ 66
L +L K +K K+ HA V S F S ++ +C G + +VF +
Sbjct: 323 LPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCK---CGDMASGRRVFYGSK 379
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
++ + NG ++ L M + G PD TI L CA LR G+
Sbjct: 380 QRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKE 439
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
IH Y+ K ++F +P++S V+ SLM+ Y+K G
Sbjct: 440 IHCYALK-----NLF------------------------LPNVSLVT-SLMVM-YSKCGV 468
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
+ FD +++ W AMI YV+N + G+ +FRLM L+ PD +L+
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
C+ + AL G +H ++ + +S ++ MY KCG+L A FD++ + + W
Sbjct: 529 CSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTW 588
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
A+I + A+ F +M G P+ TF AV + CS +G E + + M
Sbjct: 589 TAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLR 648
Query: 367 VYNMEPKSEHYGCLVDLLSRTGFFEEA 393
+YN++P EHY +++LL+R G EEA
Sbjct: 649 MYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 178/418 (42%), Gaps = 54/418 (12%)
Query: 11 LLEKCKNMKQL---KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH 67
LLE C K L KQ H + +GL++N F ++++ + GS+ A KVF
Sbjct: 117 LLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHM--YTACGSVKDAQKVFDESTS 174
Query: 68 PTVCICNTIIKAFLINGN--LNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGE 125
V N +++ +I+G L FT M G+ + Y++ K+ A G
Sbjct: 175 SNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGL 234
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVG 185
H + K GL +F+ SL+ MY K G
Sbjct: 235 KTHALAIKNGLFNSVFLKTSLVDMYF-------------------------------KCG 263
Query: 186 DVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLM-QLTDIGPDESIFVSIL 244
V LAR FDE E+D +WGAMI+G N E L LFR M I P+ I +IL
Sbjct: 264 KVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTIL 323
Query: 245 SACAHMGALDTGVWVHRYL----NRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD 300
+ AL G VH ++ N P + + L+D+Y KCG++ +R+F
Sbjct: 324 PVLGDVKALKLGKEVHAHVLKSKNYVEQPF---VHSGLIDLYCKCGDMASGRRVFYGSKQ 380
Query: 301 RDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL 360
R+ + W A++SG A +G AL+ M++ G +PD +T V C+ +G ++
Sbjct: 381 RNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Query: 361 LDKMFSVYNM-EPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFL 417
+++ N+ P L+ + S+ G E + + R+ N AW A +
Sbjct: 441 --HCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRN-----VKAWTAMI 491
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 153/352 (43%), Gaps = 39/352 (11%)
Query: 77 IKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGL 136
I+ F NL L + + + G+ + T L+AC + G+ +H + GL
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 137 LFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDE 196
+ F+ L+ MY G + A+KVFDE S + SW+ ++
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLR----------------- 185
Query: 197 TPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIF--VSILSACAHMGALD 254
G +ISG + +++ L F ++ ++G D +++ ++ + A AL
Sbjct: 186 ---------GTVISGKKR---YQDVLSTF--TEMRELGVDLNVYSLSNVFKSFAGASALR 231
Query: 255 TGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLA 314
G+ H + L S+ L TSL+DMY KCG + LA+R+FD + +RDIV W AMI+GLA
Sbjct: 232 QGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLA 291
Query: 315 MHGDGIGALKLFSEM-EKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPK 373
+ AL LF M + I P+ + + G ++ + N +
Sbjct: 292 HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQ 351
Query: 374 SEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQ 425
+ L+DL + G M RR+ + ++W A +S +G+
Sbjct: 352 PFVHSGLIDLYCKCG----DMASGRRVFYGSK-QRNAISWTALMSGYAANGR 398
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 122/295 (41%), Gaps = 49/295 (16%)
Query: 10 TLLEKCKNMKQLKQA---HAQVFTS-GLDNNSFALSRVLAF--CSHPHQGSLTYACKVFQ 63
T+L C ++ +KQ H + L N S S ++ + C P Y ++F
Sbjct: 423 TVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPE-----YPIRLFD 477
Query: 64 RIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSL 123
R++ V +I ++ N +L + VF ML + PD+ T+ L C+ L+ L
Sbjct: 478 RLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKL 537
Query: 124 GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAK 183
G+ +HG+ K FV +I MY GD+ +A FD + AV SL
Sbjct: 538 GKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAV----AVKGSL------- 586
Query: 184 VGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
W A+I Y N F++ + F M P+ F ++
Sbjct: 587 --------------------TWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAV 626
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTS----LLDMYAKCGNLDLAKRL 294
LS C+ G +D +R+ N +++ S ++++ +CG ++ A+RL
Sbjct: 627 LSICSQAGFVDEA---YRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 176/410 (42%), Gaps = 54/410 (13%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFL 81
+Q H + G+ N S ++ F + G LT A + F ++ V +I A
Sbjct: 204 RQVHGNMVKVGV-GNLIVESSLVYF--YAQCGELTSALRAFDMMEEKDVISWTAVISACS 260
Query: 82 INGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIF 141
G+ + + +F ML + P+ +T+ LKAC+ + G +H K + D+F
Sbjct: 261 RKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVF 320
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD 201
VG SL+ MY AK G++ R FD ++
Sbjct: 321 VGTSLMDMY-------------------------------AKCGEISDCRKVFDGMSNRN 349
Query: 202 KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHR 261
W ++I+ + + +E + LFR+M+ + + VSIL AC +GAL G +H
Sbjct: 350 TVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHA 409
Query: 262 YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIG 321
+ + + ++ + ++L+ +Y KCG A + +P RD+V W AMISG + G
Sbjct: 410 QIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESE 469
Query: 322 ALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHY---- 377
AL EM + G++P+ T+ + AC+ SE L + + S+ K H
Sbjct: 470 ALDFLKEMIQEGVEPNPFTYSSALKACA----NSESLLIGRSIHSI----AKKNHALSNV 521
Query: 378 ---GCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHG 424
L+ + ++ GF EA + + N ++W+A + +G
Sbjct: 522 FVGSALIHMYAKCGFVSEAFRVFDSMPEKN-----LVSWKAMIMGYARNG 566
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 152/342 (44%), Gaps = 36/342 (10%)
Query: 10 TLLEKCKNMKQLK---QAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQ 66
++L+ C K L+ Q H+ V + + F + ++ + G ++ KVF +
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDM--YAKCGEISDCRKVFDGMS 346
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
+ +II A G + +F M R L +N T+ L+AC ++ LG+
Sbjct: 347 NRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKE 406
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGD 186
+H K + ++++G++L+ +YC G+ A V ++PS VS
Sbjct: 407 LHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS------------- 453
Query: 187 VDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
W AMISG E L + M + P+ + S L A
Sbjct: 454 ------------------WTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKA 495
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCW 306
CA+ +L G +H + ++ + ++L+ MYAKCG + A R+FDSMP++++V W
Sbjct: 496 CANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSW 555
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTAC 348
AMI G A +G ALKL ME G + DD F + + C
Sbjct: 556 KAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 190/420 (45%), Gaps = 43/420 (10%)
Query: 12 LEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTVC 71
L+ M+ +K+ HA D + + +++ C G L YA KVF +
Sbjct: 92 LQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSC--VRLGDLVYARKVFDSMPEKNTV 149
Query: 72 ICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYA-LKACAALRDHSLGEMIHGY 130
+I +L G + +F + +++G+ N + L C+ + LG +HG
Sbjct: 150 TWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGN 209
Query: 131 SSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLA 190
K+G + ++ V +SL+ Y G++ +A + FD + +SW+ +IS ++ G
Sbjct: 210 MVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGH---- 264
Query: 191 RLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHM 250
K G++ M++ + P+E SIL AC+
Sbjct: 265 -------GIKAIGMFIGMLNHWFL--------------------PNEFTVCSILKACSEE 297
Query: 251 GALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMI 310
AL G VH + + + + + TSL+DMYAKCG + +++FD M +R+ V W ++I
Sbjct: 298 KALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSII 357
Query: 311 SGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNM 370
+ A G G A+ LF M++ + +++T +++ AC G G +L ++ + N
Sbjct: 358 AAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQI--IKNS 415
Query: 371 EPKSEHYG-CLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
K+ + G LV L + G +A +++++ S + ++W A +S C + G A
Sbjct: 416 IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-----SRDVVSWTAMISGCSSLGHESEA 470
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 6/215 (2%)
Query: 228 MQLTDIG--PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKC 285
++L D G PD FV + +CA++ +L+ VH + +++ +L+ ++ M+ +C
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 286 GNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVF 345
++ AKR+FD M D+D+ W+ M+ + +G G AL LF EM K G+KP++ TF+ VF
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 346 TACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNN 405
AC+ G E D M + + + PK+EHY ++ +L + G EA IR +
Sbjct: 345 LACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 406 GSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD 440
W A + HG L E +V +D
Sbjct: 405 AD----FWEAMRNYARLHGDIDLEDYMEELMVDVD 435
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Query: 175 SLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG 234
+++IS + + + A+ FD +KD W M+ Y N + L+LF M +
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK 334
Query: 235 PDESIFVSILSACAHMGALDTGVWVH--RYLNRARLPLSIRLSTSLLDMYAKCGNLDLAK 292
P+E F+++ ACA +G ++ ++H N + +L + KCG+L A+
Sbjct: 335 PNEETFLTVFLACATVGGIEE-AFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAE 393
Query: 293 RLFDSMP-DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPD 337
+ +P + W AM + +HGD + L ME+L + D
Sbjct: 394 QYIRDLPFEPTADFWEAMRNYARLHGD----IDLEDYMEELMVDVD 435
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 173/417 (41%), Gaps = 16/417 (3%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
P V NT+I +G R VF MLR+GLSPD+ T L D E +
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 362
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVS----WSLMISGYAK 183
++ D+ +S+++++ G++ A F+ + + ++++I GY +
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 184 VGDVDLARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
G + +A +E ++ D + ++ G + E LF M + PD
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
++ +G L + + + + R+ L + +LLD + K G++D AK ++ M
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 300 DRDI----VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMAS 355
++I + ++ +++ L G A +++ EM IKP + ++ SG AS
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 356 EGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNG-SEETLAWR 414
+G L+KM S P Y L+ R +A +++++ G + +
Sbjct: 603 DGESFLEKMIS-EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 415 AFLSACCNHGQAQLATLAAESLV-RLDNPS-GLYVLISNLYAASGRHADVRRVRDVM 469
+ L C Q + A + ++ R NP Y + N + + + R+ D M
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 129/305 (42%), Gaps = 14/305 (4%)
Query: 73 CNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKA-CAALRDHSLGEMIHGYS 131
CN +I + + G + V+ + R+G+ + YT+ + A C + +G +
Sbjct: 203 CNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ 262
Query: 132 SKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP----SLSAVSWSLMISGYAKVGDV 187
K G+ DI N+LI+ Y G M A ++ + +P S +++ +I+G K G
Sbjct: 263 EK-GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 188 DLARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
+ A+ F E D + +++ + E +F M+ D+ PD F S+
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR-- 301
+S G LD + + A L + T L+ Y + G + +A L + M +
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 302 --DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK 359
D+V +N ++ GL A KLF+EM + + PD T + G ++
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 360 LLDKM 364
L KM
Sbjct: 502 LFQKM 506
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/461 (21%), Positives = 195/461 (42%), Gaps = 30/461 (6%)
Query: 4 CSKRCLTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGS-LTYACKVF 62
C + L K K M + + ++ +GL N+F AF S + S A K
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG---AFISGYIEASEFASADKYV 545
Query: 63 QRIQH----PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAAL 118
+ ++ P +C +I + G + + +M+ G+ D T +
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 119 RDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP----SLSAVSW 174
E I G+ D+F LI + G+M A +FDE+ + + + +
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 175 SLMISGYAKVGDVDLARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQL 230
++++ G+ + G+++ A+ DE K + + +I GY ++ E LF M+L
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 231 TDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDL 290
+ PD ++ +++ C + ++ + + N+ S +L++ K G +L
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 291 A----KRLFDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFI 342
RL D DR + V +N MI L G+ A +LF +M+ + P IT+
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 343 AVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITN 402
++ G +E + D+ + +EP Y +++ + G +A+V++ ++
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAA-GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 403 SN---NGSEETLAW-RAFLSACCNHGQAQLATLAAESLVRL 439
N +G + +++ RA LS G+ ++A E++VRL
Sbjct: 904 KNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRL 944
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 152/390 (38%), Gaps = 63/390 (16%)
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNY---TIPYALKACAALRDHS- 122
P V I T+IK FL N + V M G++PD + ++ L + +
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 123 -LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISG- 180
L EM+ GL + F + I+ Y + +A K E+ + ++ +G
Sbjct: 509 FLVEMVEN-----GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 181 ---YAKVGDVDLA----RLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDI 233
Y K G V A R D+ D + +++G +N+ + +FR M+ I
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 234 GPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKR 293
PD GV L++ ++K GN+ A
Sbjct: 624 APD---------------VFSYGV--------------------LINGFSKLGNMQKASS 648
Query: 294 LFDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
+FD M + +++ +N ++ G G+ A +L EM G+ P+ +T+ +
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
Query: 350 YSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEE 409
SG +E +L D+M + + P S Y LVD R E A+ I TN +
Sbjct: 709 KSGDLAEAFRLFDEM-KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG--TNKKGCASS 765
Query: 410 TLAWRAFLSACCNHGQAQLATLAAESLVRL 439
T + A ++ G+ +L T E L RL
Sbjct: 766 TAPFNALINWVFKFGKTELKT---EVLNRL 792
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 21/278 (7%)
Query: 228 MQLTDIGPDESIFVS------ILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDM 281
+++ DI D+ V + C + AL+ VH + PL R ++++M
Sbjct: 97 LEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCIT----PLDARSYHTVIEM 152
Query: 282 YAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITF 341
Y+ C + D A +F+ MP R+ W MI LA +G+G A+ +F+ + G KPD F
Sbjct: 153 YSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIF 212
Query: 342 IAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRIT 401
AVF AC G +EGL + M+ Y M E Y ++++L+ G +EA+ + R+T
Sbjct: 213 KAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMT 272
Query: 402 NSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAASGRHAD 461
+ W ++ C G +L AE + +LD + L AA +
Sbjct: 273 VEPSVE----MWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKASDSA 328
Query: 462 VRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTH 499
+ +++++ + + P + EF AG+ +H
Sbjct: 329 MEKLKELRYCQMIRDDP-------KKRMHEFRAGDTSH 359
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 2/161 (1%)
Query: 159 ARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCF 218
AR V D I L A S+ +I Y+ D A F+E P+++ WG MI +N
Sbjct: 131 ARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEG 190
Query: 219 KEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRAR-LPLSIRLSTS 277
+ + +F PD+ IF ++ AC +G ++ G+ + R + LS+ +
Sbjct: 191 ERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVN 250
Query: 278 LLDMYAKCGNLDLAKRLFDSMP-DRDIVCWNAMISGLAMHG 317
+++M A CG+LD A + M + + W +++ + G
Sbjct: 251 VIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQG 291
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 243 ILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRD 302
I C AL VH ++ + I S+++MY+ CG+++ A +F+SMP+R+
Sbjct: 187 IAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERN 246
Query: 303 IVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLD 362
+ W +I A +G G A+ FS ++ G KPD F +F AC G +EGL +
Sbjct: 247 LETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFE 306
Query: 363 KMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCN 422
M+ Y + P EHY LV +L+ G+ +EA+ + + + + W ++
Sbjct: 307 SMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESMEPNVD------LWETLMNLSRV 360
Query: 423 HGQAQLATLAAESLVRLD 440
HG L + + +LD
Sbjct: 361 HGDLILGDRCQDMVEQLD 378
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 147 IAMYCVFGDMVA---ARKVFDEIPSLSAVS----WSLMISGYAKVGDVDLARLFFDETPE 199
IA C GD A A+ V + I S +S ++ +I Y+ G V+ A F+ PE
Sbjct: 187 IAQLC--GDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPE 244
Query: 200 KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGV-- 257
++ W +I + +N ++ + F + PD +F I AC +G ++ G+
Sbjct: 245 RNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLH 304
Query: 258 WVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM-PDRDIVCWNAMISGLAMH 316
+ Y +P + SL+ M A+ G LD A R +SM P+ D+ W +++ +H
Sbjct: 305 FESMYKEYGIIPC-MEHYVSLVKMLAEPGYLDEALRFVESMEPNVDL--WETLMNLSRVH 361
Query: 317 GD 318
GD
Sbjct: 362 GD 363
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 177/409 (43%), Gaps = 26/409 (6%)
Query: 6 KRCLTLLEKCKNMKQLK---QAHAQVFTSGLDNNSFALSRVL-AFCSHPHQGSLTYACKV 61
+ C+ L K +++ + ++ SG+ ++L+ V+ C +G + + K+
Sbjct: 190 RSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLC---RRGEVEKSKKL 246
Query: 62 FQRIQ----HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAA 117
+ P NTII A++ + + V M ++G+ + T ++
Sbjct: 247 IKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVK 306
Query: 118 LRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP----SLSAVS 173
S E + + G+ D+ V SLI+ C G+M A +FDE+ S S+ +
Sbjct: 307 NGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYT 366
Query: 174 WSLMISGYAKVGDVDLARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQ 229
+ +I G KVG++ A + +E K + ++ +I GY + E ++ +M+
Sbjct: 367 YGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME 426
Query: 230 LTDIGPDESIFVSILSACAHMGALDTG-VWVHRYLNRARLPLSIRLSTSLLDMYAKCGNL 288
D +I S + D W+ R + + LS T+L+D+Y K GN+
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM-EGGVKLSTVSYTNLIDVYCKEGNV 485
Query: 289 DLAKRLFDSMPDRDI----VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAV 344
+ AKRLF M + + + +N MI G A KL + ME G+ PD T+ ++
Sbjct: 486 EEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSL 545
Query: 345 FTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEA 393
+ E ++L +M + ++ S Y ++ LS+ G +EA
Sbjct: 546 IHGECIADNVDEAMRLFSEM-GLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 134/347 (38%), Gaps = 90/347 (25%)
Query: 51 HQGSLTYACKVFQRIQH----PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNY 106
G ++ A K+F ++ V + ++I GN+ R +F + GLSP +Y
Sbjct: 306 KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY 365
Query: 107 TIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEI 166
T G +I G C G+M AA + +E+
Sbjct: 366 T---------------YGALIDG--------------------VCKVGEMGAAEILMNEM 390
Query: 167 PS----LSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCF---- 218
S ++ V ++ +I GY + G VD A + +D + KG + + +CF
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQ--KGFQADVFTCNTIASCFNRLK 448
Query: 219 ---KEGLYLFRLMQ------------LTDIGPDES-------IFVSILSACAHMGALDTG 256
+ +LFR+M+ L D+ E +FV + S A+
Sbjct: 449 RYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYN 508
Query: 257 VWVHRYLNRARLPLSIRLS---------------TSLLDMYAKCGNLDLAKRLFDSMP-- 299
V ++ Y + ++ + +L TSL+ N+D A RLF M
Sbjct: 509 VMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK 568
Query: 300 --DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAV 344
D++ V + MISGL+ G A L+ EM++ G D+ + A+
Sbjct: 569 GLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTAL 615
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 110/271 (40%), Gaps = 16/271 (5%)
Query: 212 YVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLS 271
YV N F+EGL +F M + DE + L A +D + + R + + + ++
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 272 IRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI----VCWNAMISGLAMHGDGIGALKLFS 327
+ T +++ + G ++ +K+L + I +N +I+ D G +
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 328 EMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRT 387
M+K G+ + +T+ + +G S+ KL D+M +E Y L+ R
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE-RGIESDVHVYTSLISWNCRK 342
Query: 388 GFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGL-- 445
G + A ++ +T S + + A + C G+ AAE L+ G+
Sbjct: 343 GNMKRAFLLFDELT-EKGLSPSSYTYGALIDGVCKVGEMG----AAEILMNEMQSKGVNI 397
Query: 446 -YVLISNL---YAASGRHADVRRVRDVMKNK 472
V+ + L Y G + + DVM+ K
Sbjct: 398 TQVVFNTLIDGYCRKGMVDEASMIYDVMEQK 428
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 157/353 (44%), Gaps = 23/353 (6%)
Query: 61 VFQRIQH----PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACA 116
VF+R++ PTV +I + G +++ L V M G+ + T +
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 117 ALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL----SAV 172
L+D + + K G+ D+ + N++I+ +C G+M A + E+ L +
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 173 SWSLMISGYAKVGDVDLARLFFDETPE----KDKGIWGAMISGYVQNNCFKEGLYLFRLM 228
++ +I GYAK GD+ + FD + +I+G V+ ++ + + M
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 229 QLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRAR---LPLSIRLSTSLLDMYAKC 285
L + +E + I+ A +G DTG Y R + L + I +LL K
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVG--DTGK-AFEYFTRLQNEGLDVDIFTYEALLKACCKS 707
Query: 286 GNLDLAKRLFDSMPDRDI----VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITF 341
G + A + M R+I +N +I G A GD A L +M+K G+KPD T+
Sbjct: 708 GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTY 767
Query: 342 IAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
+ +ACS +G + + +++M ++ ++P + Y L+ +R E+A+
Sbjct: 768 TSFISACSKAGDMNRATQTIEEMEAL-GVKPNIKTYTTLIKGWARASLPEKAL 819
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/474 (19%), Positives = 183/474 (38%), Gaps = 88/474 (18%)
Query: 52 QGSLTYACKVFQRIQ----HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLS----- 102
+G + A + F+R++ PT I ++I A+ + +++ L M G+
Sbjct: 322 RGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVT 381
Query: 103 ---------------PDNYTIPYALKACAALRDHSLGEMIHGYS---------------S 132
+Y A + L G++I+ +
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME 441
Query: 133 KLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP----SLSAVSWSLMISGYAKVGDV- 187
+ G+ I + ++++ Y + D VF + + + V++ +I+ Y KVG +
Sbjct: 442 EEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKIS 501
Query: 188 ---DLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSIL 244
+++R+ +E + + + MI+G+V+ + +F M + PD ++ +I+
Sbjct: 502 KALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNII 561
Query: 245 SACAHMGALDTGVWV--------HRYLNRARLPL--------SIRLSTSLLDMYAKCG-- 286
SA MG +D + HR R +P+ +R S + DM +CG
Sbjct: 562 SAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 621
Query: 287 -----------------NLDLAKRLFDSMPDRDIVC----WNAMISGLAMHGDGIGALKL 325
++ A + D M + + ++ G A GD A +
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEY 681
Query: 326 FSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLS 385
F+ ++ G+ D T+ A+ AC SG L + +M S N+ S Y L+D +
Sbjct: 682 FTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM-SARNIPRNSFVYNILIDGWA 740
Query: 386 RTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRL 439
R G EA +I+++ + + +F+SAC G AT E + L
Sbjct: 741 RRGDVWEAADLIQQM-KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 143/369 (38%), Gaps = 34/369 (9%)
Query: 163 FDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDE------TPEKDKGIWGAMISGYVQNN 216
F++I S + LM+ Y + GD+ AR F+ TP I+ ++I Y
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSR--IYTSLIHAYAVGR 358
Query: 217 CFKEGLYLFRLMQLTDIGPD---ESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIR 273
E L R M+ I S+ V S H A D W + R+ ++
Sbjct: 359 DMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAAD--YW---FDEAKRIHKTLN 413
Query: 274 LSTSLLDMYAKCG--NLDLAKRLFDSMP----DRDIVCWNAMISGLAMHGDGIGALKLFS 327
S +YA C N++ A+ L M D I ++ M+ G M D L +F
Sbjct: 414 ASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFK 473
Query: 328 EMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRT 387
+++ G P +T+ + + G S+ L+ + ++ ++ + Y +++ +
Sbjct: 474 RLKECGFTPTVVTYGCLINLYTKVGKISKALE-VSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 388 GFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDN--PSGL 445
+ A + + + + + +SA C G A + + +L + +
Sbjct: 533 KDWANAFAVFEDMVKEGM-KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 446 YVLISNLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEI 505
++ I + YA SG D+RR +V D C V I G QM++
Sbjct: 592 FMPIIHGYAKSG---DMRRSLEVF-----DMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 506 HSILEKMHL 514
IL++M L
Sbjct: 644 VEILDEMTL 652
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 134/302 (44%), Gaps = 24/302 (7%)
Query: 219 KEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSL 278
K+ LY ++ + D S + + C L VH ++ + L + + L
Sbjct: 236 KKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVL 295
Query: 279 LDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDD 338
L+MY+ CG + A +F+ M ++++ W +I A +G G A+ +FS ++ G PD
Sbjct: 296 LEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDG 355
Query: 339 ITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIR 398
F +F AC G EGL + M Y + P E Y LV++ + GF +EA+ +
Sbjct: 356 QLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVE 415
Query: 399 RITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNLYAASG- 457
R+ N W ++ HG +L AE + LD P+ L N + G
Sbjct: 416 RMPMEPN----VDVWETLMNLSRVHGNLELGDYCAEVVEFLD-PTRL-----NKQSREGF 465
Query: 458 ---RHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILE--KM 512
+ +DV ++ +K KR G S + EF AG+ P+ DE+ +L KM
Sbjct: 466 IPVKASDVE--KESLK-KRSGILHGVKS-----SMQEFRAGDTNLPENDELFQLLRNLKM 517
Query: 513 HL 514
H+
Sbjct: 518 HM 519
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
Query: 161 KVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKE 220
K+ + L S +++ Y+ G + A F++ EK+ W +I + +N ++
Sbjct: 279 KISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGED 338
Query: 221 GLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRAR-LPLSIRLSTSLL 279
+ +F + PD +F I AC +G +D G+ ++R + SI SL+
Sbjct: 339 AIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLV 398
Query: 280 DMYAKCGNLDLAKRLFDSMP-DRDIVCWNAMISGLAMHGD 318
+MYA G LD A + MP + ++ W +++ +HG+
Sbjct: 399 EMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGN 438
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 168/393 (42%), Gaps = 59/393 (15%)
Query: 27 QVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH----PTVCICNTIIKAFLI 82
+ F +GL N F + +L++ QG A ++ +++ P V N ++
Sbjct: 434 ESFETGLAN-VFVCNTILSWLCK--QGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCR 490
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFV 142
N++ VF+N+L GL P+NYT + C D + + + + + V
Sbjct: 491 QKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVV 550
Query: 143 GNSLIAMYCVFGDMVAARKVFDEIPS-----LSAVSWSLMISGYAKVGDVDLARLFFDE- 196
++I C G AR++ + +S +S++ +I G+ K G++D A ++E
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 197 -----TPE---------------------------KDKGI------WGAMISGYVQNNCF 218
+P K+KG+ +GA+I G+ + +
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 219 KEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSL 278
+ LF + + P + I+ S++S ++G + + +++ + + L + T+L
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 279 LDMYAKCGNLDLAKRLFDSM------PDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKL 332
+D K GNL LA L+ M PD + + +++GL+ G + +K+F EM+K
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDE--IIYTVIVNGLSKKGQFVKVVKMFEEMKKN 788
Query: 333 GIKPDDITFIAVFTACSYSGMASEGLKLLDKMF 365
+ P+ + + AV G E +L D+M
Sbjct: 789 NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 145/352 (41%), Gaps = 56/352 (15%)
Query: 14 KCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFC--SHPHQGSLTYA------------- 58
+ KNM + + + GL N++ S ++ C +H Q +L
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549
Query: 59 ---------CKVFQR----------IQHPTVCIC----NTIIKAFLINGNLNRTLHVFTN 95
CKV Q I+ +C+ N+II F G ++ + +
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 96 MLRNGLSPDNYTIPYALKA-CAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFG 154
M NG+SP+ T + C R EM +K G+ DI +LI +C
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK-GVKLDIPAYGALIDGFCKRS 668
Query: 155 DMVAARKVFDEI------PSLSAVSWSLMISGYAKVGD----VDLARLFFDETPEKDKGI 204
+M +A +F E+ PS ++ +ISG+ +G+ +DL + + D G
Sbjct: 669 NMESASALFSELLEEGLNPSQPI--YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT 726
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLN 264
+ +I G +++ L+ MQ + PDE I+ I++ + G V + +
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMK 786
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIV----CWNAMISG 312
+ + ++ + +++ + + GNLD A RL D M D+ I+ ++ ++SG
Sbjct: 787 KNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 159/360 (44%), Gaps = 21/360 (5%)
Query: 14 KCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH----PT 69
K NM + ++ + G+ N A + ++ H L A +F +++ P
Sbjct: 316 KQGNMDDAIRLKDEMLSDGISMNVVAATSLIT--GHCKNNDLVSALVLFDKMEKEGPSPN 373
Query: 70 VCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHG 129
+ +I+ F NG + + L + M GL+P + + ++ + H +
Sbjct: 374 SVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFD 433
Query: 130 YSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL----SAVSWSLMISGYAKVG 185
S + GL ++FV N++++ C G A ++ ++ S + VS++ ++ G+ +
Sbjct: 434 ESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQK 492
Query: 186 DVDLARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFV 241
++DLAR+ F EK + + +I G +N+ + L + M ++I + ++
Sbjct: 493 NMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQ 552
Query: 242 SILSACAHMGALDTG-VWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM-- 298
+I++ +G + + RL +S S++D + K G +D A ++ M
Sbjct: 553 TIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCG 612
Query: 299 --PDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTA-CSYSGMAS 355
+++ + ++++GL + AL++ EM+ G+K D + A+ C S M S
Sbjct: 613 NGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMES 672
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 172/425 (40%), Gaps = 42/425 (9%)
Query: 32 GLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH----PTVCICNTIIKAFLINGNLN 87
G + NS A + +L S Q +A + ++ P N + A + +L
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTD--HAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLT 215
Query: 88 RTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKL--GLLFDIFVGNS 145
+++ M+ G+ DN T ++A +LR+ E + S + G D + +
Sbjct: 216 EAKELYSRMVAIGVDGDNVTTQLLMRA--SLREEKPAEALEVLSRAIERGAEPDSLLYSL 273
Query: 146 LIAMYCVFGDMVAARKVFDEIPSL-----SAVSWSLMISGYAKVGDVDLARLFFDETPEK 200
+ C D+ A + E+ S +++ +I K G++D A DE
Sbjct: 274 AVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEM--L 331
Query: 201 DKGI------WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALD 254
GI ++I+G+ +NN L LF M+ P+ F ++ G ++
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391
Query: 255 TGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR---DIVCWNAMIS 311
+ ++ + L S+ +++ + K + A +LFD + ++ N ++S
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILS 451
Query: 312 GLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTA-CSYSGMASEGL---KLLDKMFSV 367
L G A +L S+ME GI P+ +++ V C M + +L+K
Sbjct: 452 WLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK---- 507
Query: 368 YNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSN---NGSEETLAWRAFLSACCNHG 424
++P + Y L+D R + A+ ++ +T+SN NG + ++ ++ C G
Sbjct: 508 -GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNG----VVYQTIINGLCKVG 562
Query: 425 QAQLA 429
Q A
Sbjct: 563 QTSKA 567
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 8/201 (3%)
Query: 235 PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPL-SIRLSTSLLDMYAKCGNLDLAKR 293
PD ++ + AC L + R + +L + S TS++ K GN+D A R
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325
Query: 294 LFDSM----PDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
L D M ++V ++I+G + D + AL LF +MEK G P+ +TF +
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 350 YSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEE 409
+G + L+ KM V + P H ++ + EEA+ + + G
Sbjct: 386 KNGEMEKALEFYKKM-EVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE--SFETGLAN 442
Query: 410 TLAWRAFLSACCNHGQAQLAT 430
LS C G+ AT
Sbjct: 443 VFVCNTILSWLCKQGKTDEAT 463
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 149/355 (41%), Gaps = 32/355 (9%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
P V +T I F +G L L F +M R+ LSP+ T + D + +
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAA-----RKVFDEIPSLSAVSWSLMISGYA 182
+ ++ + ++ +LI +C G+M A R V D + S V ++ +I G+
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLV-YTTIIDGFF 279
Query: 183 KVGDVDLARLFF----DETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDES 238
+ GD D A F ++ D +G +ISG N KE + M+ +D+ PD
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 239 IFVSILSACAHMGALDTGV-WVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDS 297
IF ++++A G + V H+ + R P + LST ++D AK G L A F
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALST-MIDGIAKNGQLHEAIVYFCI 398
Query: 298 MPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEG 357
D++ + +I L GD I +LFS++ + G+ PD + + G +
Sbjct: 399 EKANDVM-YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457
Query: 358 LKLLDKMFSVYNMEPKSEHYGCLVDLLSRT---------GFFEEAMVIIRRITNS 403
KL +M G L+DLL+ T G EA + + NS
Sbjct: 458 FKLKTRMV----------QEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNS 502
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/421 (19%), Positives = 160/421 (38%), Gaps = 58/421 (13%)
Query: 54 SLTYACKVFQRIQHPTVCICNTIIKAFLINGNLN-RTLHVFTNMLRNGLSPDNYTIPYAL 112
+L + ++ + P CN I LIN N +L ++ G +P + +
Sbjct: 5 ALQFLSRLRKSSNLPDPFTCNKHIHQ-LINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 113 KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDE------- 165
L E I + G D+ NSLI +C GD+ +A V +
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 166 IPSLSAVSWSLMISGYAKVGDVDLARLFFD---ETPEKDKGIWGAMISGYVQNNCFKEGL 222
I VS++ + +G++K+ +D ++ + + + I + ++ + L
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLAL 183
Query: 223 YLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMY 282
F M+ + P+ F ++ G L+ V +++ + R R+ L++ T+L+D +
Sbjct: 184 KSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGF 243
Query: 283 AKCGNLDLAKRLFDSM-PDR--------------------------------------DI 303
K G + A+ ++ M DR DI
Sbjct: 244 CKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDI 303
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDK 363
+ +ISGL +G A ++ +MEK + PD + F + A SG + + K
Sbjct: 304 TAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHK 363
Query: 364 MFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNH 423
+ EP ++D +++ G EA+V I +N+ + + + A C
Sbjct: 364 LIE-RGFEPDVVALSTMIDGIAKNGQLHEAIVYF-CIEKAND-----VMYTVLIDALCKE 416
Query: 424 G 424
G
Sbjct: 417 G 417
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 168/384 (43%), Gaps = 23/384 (5%)
Query: 53 GSLTYACKVFQRIQ----HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRN-GLSPDNYT 107
G + ++F RI +V NT++ + N + +F N + G++P+ +T
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFT 193
Query: 108 IPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP 167
+KA D + +GL+ ++ +++ Y GDM +A++V +E+
Sbjct: 194 CNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 253
Query: 168 SL----SAVSWSLMISGYAKVGDVDLARLFFDETP----EKDKGIWGAMISGYVQNNCFK 219
A ++++++ GY K+G A D+ E ++ +G MI +
Sbjct: 254 DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 313
Query: 220 EGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDT--GVWVHRYLNRARLPLSIRLSTS 277
E +F M PD S+ ++ A +D G+W + L +P + LST
Sbjct: 314 EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLW-RKMLKNNCMPDNALLST- 371
Query: 278 LLDMYAKCGNLDLAKRLFDSMPDRDI---VCWNAMISGLAMHGDGIGALKLFSEMEKLGI 334
L+ K G + A++LFD I + +N +I+G+ G+ A +L+ +M +
Sbjct: 372 LIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKC 431
Query: 335 KPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
KP+ T+ + S +G EG+++L++M + P + L + L + G E+AM
Sbjct: 432 KPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEI-GCFPNKTTFLILFEGLQKLGKEEDAM 490
Query: 395 VIIRRITNSNNGSEETLAWRAFLS 418
I+ NG + +W FL
Sbjct: 491 KIVSMAV--MNGKVDKESWELFLK 512
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 127/337 (37%), Gaps = 59/337 (17%)
Query: 43 VLAFCSHPHQGSLTYACKVFQRIQH----PTVCICNTIIKAFLINGNLNRTLHVFTNMLR 98
V A C + + A KV I P + TI+ ++ G++ V ML
Sbjct: 198 VKALCK---KNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLD 254
Query: 99 NGLSPD--NYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDM 156
G PD YT+ L+ YC G
Sbjct: 255 RGWYPDATTYTV-------------------------------------LMDGYCKLGRF 277
Query: 157 VAARKVFDEIP----SLSAVSWSLMISGYAKVGDVDLARLFFDETPEK----DKGIWGAM 208
A V D++ + V++ +MI K AR FDE E+ D + +
Sbjct: 278 SEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKV 337
Query: 209 ISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARL 268
I +++ E L+R M + PD ++ +++ G + + + +
Sbjct: 338 IDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI 397
Query: 269 PLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGALK 324
P + +T + M K G L A RL+D M +R + +N +I GL+ +G+ ++
Sbjct: 398 PSLLTYNTLIAGMCEK-GELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVR 456
Query: 325 LFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLL 361
+ EM ++G P+ TF+ +F G + +K++
Sbjct: 457 VLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 150/371 (40%), Gaps = 49/371 (13%)
Query: 44 LAFCSHPHQGSLTYACKVF-QRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLS 102
L FC + T K+ Q+ P V N ++ A N++ +F+ ML GL
Sbjct: 457 LLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLE 516
Query: 103 PDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKV 162
P+N+T + +D + + + + N++I C G A+++
Sbjct: 517 PNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEM 576
Query: 163 FDEIP-----SLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKG-------------- 203
+ S+S S++ +I G+ KVGD D A + E E K
Sbjct: 577 LQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFC 636
Query: 204 -------------------------IWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDES 238
+GA+I G+ + N K LF + + P+ S
Sbjct: 637 KSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVS 696
Query: 239 IFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM 298
++ S++S ++G +D + +++ + + + T+++D K GN++LA L+ +
Sbjct: 697 VYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSEL 756
Query: 299 PDRDIV----CWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMA 354
D IV +++GL+ G + A K+ EM+K + P+ + + V G
Sbjct: 757 LDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNL 816
Query: 355 SEGLKLLDKMF 365
+E +L D+M
Sbjct: 817 NEAFRLHDEML 827
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 167/399 (41%), Gaps = 46/399 (11%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
P V N ++ + + + ++ ++ M+ G++ DN T ++A +LR+ E +
Sbjct: 202 PFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRA--SLRERKPEEAV 259
Query: 128 HGYSSKL-------GLLFDIFVGNSLIAMYCVFGDMVAARKVFDE------IPSLSAVSW 174
+ + GLLF + V + C D+V A + E +P+ S ++
Sbjct: 260 KIFRRVMSRGAEPDGLLFSLAVQAA-----CKTPDLVMALDLLREMRGKLGVPA-SQETY 313
Query: 175 SLMISGYAKVGDVDLARLFFDETPEKDKGI------WGAMISGYVQNNCFKEGLYLFRLM 228
+ +I + K G+++ A DE GI ++++GY + N + L LF M
Sbjct: 314 TSVIVAFVKEGNMEEAVRVMDEM--VGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM 371
Query: 229 QLTDIGPDESIF-VSILSACAHMGALDTGVWVHRYLNRARL-PLSIRLSTSL---LDMYA 283
+ + PD+ +F V + C +M ++ + + + R+ P S+ + T + L +
Sbjct: 372 EEEGLAPDKVMFSVMVEWFCKNM-EMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAES 430
Query: 284 KCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIA 343
L++ F+S +C N + G A ME+ GI+P+ + +
Sbjct: 431 PEAALEIFNDSFESWIAHGFMC-NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNN 489
Query: 344 VFTA-CSYSGMASEGLKLLDKMFSVY---NMEPKSEHYGCLVDLLSRTGFFEEAMVIIRR 399
+ A C M L +FS +EP + Y L+D + + A +I +
Sbjct: 490 MMLAHCRMKNM-----DLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQ 544
Query: 400 ITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVR 438
+ SN + E + + ++ C GQ A ++L++
Sbjct: 545 MNASNFEANEVI-YNTIINGLCKVGQTSKAKEMLQNLIK 582
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 162/378 (42%), Gaps = 29/378 (7%)
Query: 48 SHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYT 107
H ++G+ ++ ++ P V +T+I +G + T ML+ G P+ YT
Sbjct: 259 EHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYT 318
Query: 108 IPYALKACAALRDHSL------GEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARK 161
+ +K C LR + +MI G+ GL ++ N+L+ +C G++V A
Sbjct: 319 LSSLVKGC-FLRGTTFDALDLWNQMIRGF----GLQPNVVAYNTLVQGFCSHGNIVKAVS 373
Query: 162 VFDEIPSLSAV----SWSLMISGYAKVGDVDLARLFFDETPEK----DKGIWGAMISGYV 213
VF + + ++ +I+G+AK G +D A +++ + ++ M+
Sbjct: 374 VFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALC 433
Query: 214 QNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRA-RLPLSI 272
+++ FKE L +M + P F + + G LD V R + + R P +I
Sbjct: 434 RHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNI 493
Query: 273 RLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGD------GIGALKLF 326
LLD AK ++ A L + R + W++ +HG GI AL+L
Sbjct: 494 VTYNELLDGLAKANRIEEAYGLTREIFMRGVE-WSSSTYNTLLHGSCNAGLPGI-ALQLV 551
Query: 327 SEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKM-FSVYNMEPKSEHYGCLVDLLS 385
+M G PD+IT + A G A ++LD + P Y ++ L
Sbjct: 552 GKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLC 611
Query: 386 RTGFFEEAMVIIRRITNS 403
R+ E+ ++++ R+ ++
Sbjct: 612 RSNCREDGVILLERMISA 629
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 160/386 (41%), Gaps = 53/386 (13%)
Query: 58 ACKVFQRIQH----PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALK 113
A ++F RI+ P+V I N ++ L + V+ +M R+G P+
Sbjct: 130 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPN--------- 180
Query: 114 ACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLS--- 170
+F N L+ C + A+K+ E+ +
Sbjct: 181 --------------------------VFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCP 214
Query: 171 -AVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQ 229
AVS++ +IS +VG V R E E ++ A+I+G + + +K L R M
Sbjct: 215 DAVSYTTVISSMCEVGLVKEGREL-AERFEPVVSVYNALINGLCKEHDYKGAFELMREMV 273
Query: 230 LTDIGPDESIFVSILSACAHMGALDTGV-WVHRYLNRARLPLSIRLSTSLLDMYAKCGNL 288
I P+ + ++++ + G ++ ++ + L R P LS+ + + +
Sbjct: 274 EKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF 333
Query: 289 DLAKRLFDSMP-----DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIA 343
D A L++ M ++V +N ++ G HG+ + A+ +FS ME++G P+ T+ +
Sbjct: 334 D-ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGS 392
Query: 344 VFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNS 403
+ + G + + +KM + P Y +V+ L R F+EA +I I +
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLT-SGCCPNVVVYTNMVEALCRHSKFKEAESLI-EIMSK 450
Query: 404 NNGSEETLAWRAFLSACCNHGQAQLA 429
N + + AF+ C+ G+ A
Sbjct: 451 ENCAPSVPTFNAFIKGLCDAGRLDWA 476
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 92/211 (43%), Gaps = 11/211 (5%)
Query: 223 YLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMY 282
YL + M+L E +F+S++S +G + V + + S+++ +LD
Sbjct: 97 YLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTL 156
Query: 283 AKCGNLDLAKRLFDSMP----DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDD 338
+ + ++ M + ++ +N ++ L + GA KL EM G PD
Sbjct: 157 LGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDA 216
Query: 339 ITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIR 398
+++ V ++ G+ EG +L ++ EP Y L++ L + ++ A ++R
Sbjct: 217 VSYTTVISSMCEVGLVKEGRELAER------FEPVVSVYNALINGLCKEHDYKGAFELMR 270
Query: 399 RITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
+ S +++ ++ CN GQ +LA
Sbjct: 271 EMV-EKGISPNVISYSTLINVLCNSGQIELA 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 171/431 (39%), Gaps = 29/431 (6%)
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
P V N ++KA N ++ + M G PD + + + +G +
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC-----EVGLV 232
Query: 127 IHGYSSKLGLLFD--IFVGNSLIAMYCVFGDMVAA----RKVFDEIPSLSAVSWSLMISG 180
G +L F+ + V N+LI C D A R++ ++ S + +S+S +I+
Sbjct: 233 KEG--RELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 181 YAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEG-----LYLF-RLMQLTDIG 234
G ++LA F + ++ +S V+ CF G L L+ ++++ +
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK-GCFLRGTTFDALDLWNQMIRGFGLQ 349
Query: 235 PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRL 294
P+ + +++ G + V V ++ +IR SL++ +AK G+LD A +
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYI 409
Query: 295 FDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSY 350
++ M ++V + M+ L H A L M K P TF A
Sbjct: 410 WNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCD 469
Query: 351 SGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSE-E 409
+G K+ +M + P Y L+D L++ EEA + R I G E
Sbjct: 470 AGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIF--MRGVEWS 527
Query: 410 TLAWRAFLSACCNHGQAQLA-TLAAESLVRLDNPSGLYV-LISNLYAASGRHADVRRVRD 467
+ + L CN G +A L + +V +P + + +I Y G+ ++ D
Sbjct: 528 SSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD 587
Query: 468 VMKNKRVDKAP 478
++ R P
Sbjct: 588 LVSCGRRKWRP 598
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 148/331 (44%), Gaps = 23/331 (6%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYT----IPYALKACA-ALRDHS 122
P V +T++ + G L++ + M R GL P++Y I + C A + +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 123 LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLS----AVSWSLMI 178
EMI + G+L D V +LI +C GD+ AA K F E+ S ++++ +I
Sbjct: 339 FSEMI-----RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 179 SGYAKVGD-VDLARLF---FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG 234
SG+ ++GD V+ +LF F + E D + +I+GY + K+ + M
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 235 PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRL 294
P+ + +++ G LD+ + + + L +I S+++ K GN++ A +L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 295 FDSMP----DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSY 350
+ D V + ++ G+ A ++ EM G++P +TF +
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 351 SGMASEGLKLLDKMFSVYNMEPKSEHYGCLV 381
GM +G KLL+ M + + P + + LV
Sbjct: 574 HGMLEDGEKLLNWMLA-KGIAPNATTFNSLV 603
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 145/351 (41%), Gaps = 29/351 (8%)
Query: 66 QHPTVCIC------NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALR 119
+ P V +C N +I G + H+ M G +PD I Y+ R
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD--VISYSTVVNGYCR 293
Query: 120 DHSLGEMIHGYS-----SKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL----S 170
GE+ + + GL + ++ S+I + C + A + F E+
Sbjct: 294 ---FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 171 AVSWSLMISGYAKVGDVDLARLFFDETPEKDKG----IWGAMISGYVQNNCFKEGLYLFR 226
V ++ +I G+ K GD+ A FF E +D + A+ISG+ Q E LF
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 227 LMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCG 286
M + PD F +++ G + VH ++ +A ++ T+L+D K G
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 287 NLDLAKRLFDSM----PDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFI 342
+LD A L M +I +N++++GL G+ A+KL E E G+ D +T+
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 343 AVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEA 393
+ A SG + ++L +M ++P + L++ G E+
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNGFCLHGMLEDG 580
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 133/327 (40%), Gaps = 20/327 (6%)
Query: 162 VFDEIPSL----SAVSWSLMISGYAKVGDVDLAR--LFFDE----TPEKDKGIWGAMISG 211
VF E P + + S++++I ++G + A L E TP D + +++G
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP--DVISYSTVVNG 290
Query: 212 YVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLS 271
Y + + L +M+ + P+ I+ SI+ + L + R +
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 272 IRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI----VCWNAMISGLAMHGDGIGALKLFS 327
+ T+L+D + K G++ A + F M RDI + + A+ISG GD + A KLF
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 328 EMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRT 387
EM G++PD +TF + +G + ++ + M P Y L+D L +
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKE 469
Query: 388 GFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLAT-LAAE-SLVRLDNPSGL 445
G + A ++ + + + ++ C G + A L E L+ +
Sbjct: 470 GDLDSANELLHEMWKIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 446 YVLISNLYAASGRHADVRRVRDVMKNK 472
Y + + Y SG + + M K
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGK 555
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 148/331 (44%), Gaps = 23/331 (6%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYT----IPYALKACA-ALRDHS 122
P V +T++ + G L++ + M R GL P++Y I + C A + +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 123 LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLS----AVSWSLMI 178
EMI + G+L D V +LI +C GD+ AA K F E+ S ++++ +I
Sbjct: 339 FSEMI-----RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 179 SGYAKVGD-VDLARLF---FDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG 234
SG+ ++GD V+ +LF F + E D + +I+GY + K+ + M
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 235 PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRL 294
P+ + +++ G LD+ + + + L +I S+++ K GN++ A +L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 295 FDSMP----DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSY 350
+ D V + ++ G+ A ++ EM G++P +TF +
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 351 SGMASEGLKLLDKMFSVYNMEPKSEHYGCLV 381
GM +G KLL+ M + + P + + LV
Sbjct: 574 HGMLEDGEKLLNWMLA-KGIAPNATTFNSLV 603
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 145/351 (41%), Gaps = 29/351 (8%)
Query: 66 QHPTVCIC------NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALR 119
+ P V +C N +I G + H+ M G +PD I Y+ R
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD--VISYSTVVNGYCR 293
Query: 120 DHSLGEMIHGYS-----SKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL----S 170
GE+ + + GL + ++ S+I + C + A + F E+
Sbjct: 294 ---FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 171 AVSWSLMISGYAKVGDVDLARLFFDETPEKDKG----IWGAMISGYVQNNCFKEGLYLFR 226
V ++ +I G+ K GD+ A FF E +D + A+ISG+ Q E LF
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 227 LMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCG 286
M + PD F +++ G + VH ++ +A ++ T+L+D K G
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 287 NLDLAKRLFDSM----PDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFI 342
+LD A L M +I +N++++GL G+ A+KL E E G+ D +T+
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 343 AVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEA 393
+ A SG + ++L +M ++P + L++ G E+
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNGFCLHGMLEDG 580
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 133/327 (40%), Gaps = 20/327 (6%)
Query: 162 VFDEIPSL----SAVSWSLMISGYAKVGDVDLAR--LFFDE----TPEKDKGIWGAMISG 211
VF E P + + S++++I ++G + A L E TP D + +++G
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP--DVISYSTVVNG 290
Query: 212 YVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLS 271
Y + + L +M+ + P+ I+ SI+ + L + R +
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 272 IRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI----VCWNAMISGLAMHGDGIGALKLFS 327
+ T+L+D + K G++ A + F M RDI + + A+ISG GD + A KLF
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 328 EMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRT 387
EM G++PD +TF + +G + ++ + M P Y L+D L +
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKE 469
Query: 388 GFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLAT-LAAE-SLVRLDNPSGL 445
G + A ++ + + + ++ C G + A L E L+ +
Sbjct: 470 GDLDSANELLHEMWKIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 446 YVLISNLYAASGRHADVRRVRDVMKNK 472
Y + + Y SG + + M K
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGK 555
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 138/315 (43%), Gaps = 48/315 (15%)
Query: 135 GLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLS----AVSWSLMISGYAKVGDVD-- 188
G +++V N L+ +C G++ A+KVFDEI S VS++ +I+GY KVG++D
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 189 --LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
L D + A+I+ + N LF M + P++ IF +++
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM------PD 300
+ G +D ++ + L I L +L++ + K G+L A+ + D M PD
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 301 R---------------------------------DIVCWNAMISGLAMHGDGIGALKLFS 327
+ D V ++A++ G+ G I A +
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 328 EMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRT 387
EM + GIKPDD+T+ + A G A G KLL +M S ++ P Y L++ L +
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV-PSVVTYNVLLNGLCKL 533
Query: 388 GFFEEAMVIIRRITN 402
G + A +++ + N
Sbjct: 534 GQMKNADMLLDAMLN 548
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 139/334 (41%), Gaps = 20/334 (5%)
Query: 25 HAQVFTSGLDNNSFALSRVL-AFCSHPHQGSLTYACKVFQRIQ----HPTVCICNTIIKA 79
+ ++ +G N + + ++ FC +G+++ A KVF I PTV NT+I
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCK---EGNISDAQKVFDEITKRSLQPTVVSFNTLING 284
Query: 80 FLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFD 139
+ GNL+ + M ++ PD +T + A + K GL+ +
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Query: 140 IFVGNSLIAMYCVFGDMVAARKVFDEIPSL----SAVSWSLMISGYAKVGDVDLARLFFD 195
+ +LI + G++ ++ + ++ S V ++ +++G+ K GD+ AR D
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 196 ETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMG 251
+ DK + +I G+ + + L + + M I D F +++ G
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464
Query: 252 ALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR----DIVCWN 307
+ R + RA + T ++D + K G+ +L M +V +N
Sbjct: 465 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 524
Query: 308 AMISGLAMHGDGIGALKLFSEMEKLGIKPDDITF 341
+++GL G A L M +G+ PDDIT+
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITY 558
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 155/399 (38%), Gaps = 72/399 (18%)
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIH 128
T C+C+ G + V M+ G PD T L L ++
Sbjct: 455 TRCLCSA--------GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506
Query: 129 GYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL------------------- 169
+ GL+ D++ ++ +C G + ARK F+E+ +
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566
Query: 170 --------------------SAVSWSLMISGYAKVG-------------------DVDLA 190
+ V++S +I G+ K G DVD+
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 626
Query: 191 RLFFDETPEKDKGI-WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAH 249
+D+ E+ + +GA++ G+ +++ +E L M + P++ ++ +++
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 250 MGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR----DIVC 305
+G LD V ++ P ++ +SL+D Y K DLA ++ M + ++V
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMF 365
+ MI GL G A KL ME+ G +P+ +T+ A+ G L+LL++M
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 366 SVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSN 404
S + P Y L+D + G + A ++ + ++
Sbjct: 807 S-KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/343 (19%), Positives = 132/343 (38%), Gaps = 36/343 (10%)
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPSL----SAVSWSLMISGYAKVGD------VDLAR 191
+ NSL+ YC GD A K+ ++ V ++++I D +DLA
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAE 433
Query: 192 LFFDETPEKDKGIWGAMISGYVQNNC----FKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
+ E + +S + + C +++ + R M PD S + +L+
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD----RDI 303
+ ++ + + R L + T ++D + K G ++ A++ F+ M + ++
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDK 363
V + A+I A +LF M G P+ +T+ A+ +G + ++ ++
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 364 M------------FSVYN---MEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSE 408
M F Y+ P YG L+D ++ EEA ++ + S G E
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM--SMEGCE 671
Query: 409 -ETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLIS 450
+ + A + C G+ A + P+ LY S
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 163/355 (45%), Gaps = 24/355 (6%)
Query: 52 QGSLTY----ACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYT 107
Q SL Y AC V P V N +I +F G L+ + + N + +S D T
Sbjct: 112 QVSLIYSKMIACGV-----SPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVT 163
Query: 108 IPYALKACAALRDHSLGEMIHGYSS---KLGLLFDIFVGNSLIAMYCVFGDMVAARKVFD 164
+ + L +H L + + + S K+G+L D N+LI +C G+ V A+ + D
Sbjct: 164 YNTVI---SGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVD 220
Query: 165 EIPSLSAVSWSLMISGYAKVGDVDLA-RLFFDETPEKDKGIWGAMISGYVQNNCFKEGLY 223
EI L+ ++ ++++S Y + ++ A R + D + ++I+ + EG
Sbjct: 221 EISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL 280
Query: 224 LFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYA 283
L R M+ + P+ + +++ + + ++ + +P+ + + T L+D
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 284 KCGNLDLAKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDI 339
K G+L A++ F + + ++V + A++ GL GD A + ++M + + P+ +
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 340 TFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
T+ ++ GM E + LL KM N+ P YG ++D L + G E A+
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMED-QNVVPNGFTYGTVIDGLFKAGKEEMAI 454
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 149/352 (42%), Gaps = 54/352 (15%)
Query: 135 GLLFDIFVGNSLIAMYCVFGDMVAARKVF------DEIPSLSAVSWSLMISGYAKVGDVD 188
G+ D+ V L+ GD+ A K F +++P++ V+++ ++ G K GD+
Sbjct: 324 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNV--VTYTALVDGLCKAGDLS 381
Query: 189 LARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSIL 244
A + EK + + +MI+GYV+ +E + L R M+ ++ P+ + +++
Sbjct: 382 SAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVI 441
Query: 245 SACAHMGALD-----------TGVWVHRYLNRARLPLSIRLS------------------ 275
G + GV + Y+ A + R+
Sbjct: 442 DGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 501
Query: 276 ------TSLLDMYAKCGNLDLAKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGALKL 325
TSL+D++ K G+ + A + M +R D+V +N +ISG+ G +GA
Sbjct: 502 LDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK-VGADWA 560
Query: 326 FSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLS 385
+ M + GI+PD TF + + G + LKL DKM S ++P +V +L
Sbjct: 561 YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC-GIKPSLMSCNIVVGMLC 619
Query: 386 RTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLV 437
G EEA+ I+ ++ T +R FL H +A E+L+
Sbjct: 620 ENGKMEEAIHILNQMMLMEIHPNLT-TYRIFLDTSSKHKRADAIFKTHETLL 670
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 124/310 (40%), Gaps = 51/310 (16%)
Query: 48 SHPHQGSLTYACKVFQRIQ----HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSP 103
S QG K++ +++ P++ CN ++ NG + +H+ M+ + P
Sbjct: 582 SQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHP 641
Query: 104 DNYTIPYAL-------KACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDM 156
+ T L +A A + H E + Y KL V N+LIA C G
Sbjct: 642 NLTTYRIFLDTSSKHKRADAIFKTH---ETLLSYGIKLSRQ----VYNTLIATLCKLGMT 694
Query: 157 VAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNN 216
A V +GD++ AR F +T + +++ GY +
Sbjct: 695 KKAAMV---------------------MGDME-ARGFIPDTV-----TFNSLMHGYFVGS 727
Query: 217 CFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGAL-DTGVWVHRYLNRARLPLSIRLS 275
++ L + +M I P+ + + +I+ + G + + W+ +R P +
Sbjct: 728 HVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYN 787
Query: 276 TSLLDMYAKCGNLDLAKRLFDSMPDRDIV----CWNAMISGLAMHGDGIGALKLFSEMEK 331
+L+ AK GN+ + ++ M +V +N +IS A G + A +L EM K
Sbjct: 788 -ALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGK 846
Query: 332 LGIKPDDITF 341
G+ P+ T+
Sbjct: 847 RGVSPNTSTY 856
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 188/445 (42%), Gaps = 63/445 (14%)
Query: 53 GSLTYACKVFQRIQHP----TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTI 108
G L K+F + H V + ++ I ++ +G+L V+ ML G+SP+ T
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 109 PYALKA-CAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP 167
+K C R + M +G K G+ I +SLI +C G++ + +++++
Sbjct: 395 TILIKGLCQDGRIYEAFGM-YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 168 SLS----AVSWSLMISGYAKVGDVDLARLF----FDETPEKDKGIWGAMISGYVQNNCFK 219
+ V + +++ G +K G + A F ++ + ++ ++I G+ + N F
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 220 EGLYLFRLMQLTDIGPDESIFVSILSA-------CAHMGALDTGVWVHRYLNRARLPLSI 272
E L +FRLM + I PD + F +++ C HM G+ + + R ++ I
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP-TIGLQLFDLMQRNKISADI 572
Query: 273 RLSTSLLDMYAKCGNLDLAKRLFDSMP----DRDIVCWNAMISG---------------- 312
+ ++ + KC ++ A + F+++ + DIV +N MI G
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632
Query: 313 -------------------LAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGM 353
L + D GA+++FS M + G KP+ +T+ + S S
Sbjct: 633 LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 692
Query: 354 ASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAW 413
KL ++M + P Y ++D L + G +EA I + ++ + +A+
Sbjct: 693 IEGSFKLFEEM-QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL-LPDVVAY 750
Query: 414 RAFLSACCNHGQAQLATLAAESLVR 438
+ C G+ A L E ++R
Sbjct: 751 AILIRGYCKVGRLVEAALLYEHMLR 775
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 11/213 (5%)
Query: 189 LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
L L D P + + +I+G+ + LF++M+ I PD + +++
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 249 HMGALDTGVWVHRYLNRA---RLPLSIRLSTSLLDMYAKCGNLDLA----KRLFDSMPDR 301
G L G H+ ++A + L + + +S +D+Y K G+L A KR+
Sbjct: 333 KAGMLGMG---HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 302 DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLL 361
++V + +I GL G A ++ ++ K G++P +T+ ++ G G L
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 362 DKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
+ M + P YG LVD LS+ G AM
Sbjct: 450 EDMIKM-GYPPDVVIYGVLVDGLSKQGLMLHAM 481
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 106/242 (43%), Gaps = 17/242 (7%)
Query: 145 SLIAMYCVFGDMVAARKVFDEI------PSLSAVSWSLMISGYAKVGDVDLARLFFDETP 198
+LI +C G+M A +F + P L +++S +I GY K G + + F +
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDL--IAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 199 EK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALD 254
K D ++ + I YV++ +++ M I P+ + ++ G +
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 255 TGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR----DIVCWNAMI 310
++ + + + SI +SL+D + KCGNL L++ M D+V + ++
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 311 SGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNM 370
GL+ G + A++ +M I+ + + F ++ E LK+ ++ +Y +
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF-RLMGIYGI 527
Query: 371 EP 372
+P
Sbjct: 528 KP 529
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 117/287 (40%), Gaps = 43/287 (14%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
P V T+I F G ++R +F M + G+ PD I Y+ + LG
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD--LIAYSTLIDGYFKAGMLGMGH 341
Query: 128 HGYSSKL--GLLFDIFVGNSLIAMYCVFGDMVAARKVFDEI----PSLSAVSWSLMISGY 181
+S L G+ D+ V +S I +Y GD+ A V+ + S + V+++++I G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 182 AKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFV 241
+ G + A G++G ++ K G+ P +
Sbjct: 402 CQDGRIYEAF-----------GMYGQIL---------KRGME-----------PSIVTYS 430
Query: 242 SILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR 301
S++ G L +G ++ + + P + + L+D +K G + A R M +
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 302 ----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAV 344
++V +N++I G ALK+F M GIKPD TF V
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/380 (18%), Positives = 141/380 (37%), Gaps = 30/380 (7%)
Query: 60 KVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALR 119
++ +R P++ +++I F GNL ++ +M++ G PD + Y + +
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD--VVIYGVLVDGLSK 473
Query: 120 DHSLGEMIHGYSSKLGLL-----FDIFVGNSLIAMYCVFGDMVAARKVF----------D 164
G M+H + +L ++ V NSLI +C A KVF D
Sbjct: 474 Q---GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 165 EIPSLSAVSWSLMISGYAKVGDVDLARLFFD----ETPEKDKGIWGAMISGYVQNNCFKE 220
+ + S+M + K + FD D + +I + + ++
Sbjct: 531 VATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 590
Query: 221 GLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLD 280
F + + PD + +++ + LD + L + T L+
Sbjct: 591 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 650
Query: 281 MYAKCGNLDLAKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKP 336
+ K ++D A R+F M ++ + V + ++ + D G+ KLF EM++ GI P
Sbjct: 651 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 710
Query: 337 DDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVI 396
+++ + G E + + + P Y L+ + G EA ++
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDA-KLLPDVVAYAILIRGYCKVGRLVEAALL 769
Query: 397 IRRITNSNNGSEETLAWRAF 416
+ N + L RA
Sbjct: 770 YEHMLR-NGVKPDDLLQRAL 788
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 162/375 (43%), Gaps = 53/375 (14%)
Query: 142 VGNSLIAMYCVFGDMVAARKVFDEIPS----LSAVSWSLMISGYAKVGDVDLARLFFDET 197
+ +++I+ +G + A+++F+ + + ++S +IS Y + G + A F+
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 198 PEKDKGIWGAMIS-GYVQNNC------FKEGLYLFRLMQLTDIGPDESIFVSILSACAHM 250
K+ G+ +++ V + C FK+ F MQ + PD F S+L+ C+
Sbjct: 295 --KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG 352
Query: 251 GALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR----DIVCW 306
G + + + R+ + +LLD K G +DLA + MP + ++V +
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 307 NAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
+ +I G A G AL LF EM LGI D +++ + + + G + E L +L +M S
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 367 V--------YN-------------------MEPKSEH-------YGCLVDLLSRTGFFEE 392
V YN E K EH Y L+D S+ G ++E
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 393 AMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNL 452
AM I R ++ ++ L + A + A C +G A + + + + S V +++
Sbjct: 533 AMEIFREFKSAGLRADVVL-YSALIDALCKNGLVGSAVSLIDEMTK-EGISPNVVTYNSI 590
Query: 453 YAASGRHADVRRVRD 467
A GR A + R D
Sbjct: 591 IDAFGRSATMDRSAD 605
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 142/347 (40%), Gaps = 19/347 (5%)
Query: 22 KQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH----PTVCICNTII 77
K+ F G N +A S +++ ++ G A VF ++ P + N +I
Sbjct: 253 KRIFETAFAGGYGNTVYAFSALIS--AYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVI 310
Query: 78 KAFLING-NLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGL 136
A G + F M RNG+ PD T L C+ + + +
Sbjct: 311 DACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI 370
Query: 137 LFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL----SAVSWSLMISGYAKVGDVDLARL 192
D+F N+L+ C G M A ++ ++P + VS+S +I G+AK G D A
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 193 FFDETP----EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
F E D+ + ++S Y + +E L + R M I D + ++L
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 249 HMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD----RDIV 304
G D V + R + ++ ++L+D Y+K G A +F D+V
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550
Query: 305 CWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYS 351
++A+I L +G A+ L EM K GI P+ +T+ ++ A S
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 94/461 (20%), Positives = 192/461 (41%), Gaps = 61/461 (13%)
Query: 19 KQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVF------QRIQHPTVCI 72
KQ+ + ++ +G+ + + +LA CS +G L A + +RI+ V
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCS---RGGLWEAARNLFDEMTNRRIEQ-DVFS 376
Query: 73 CNTIIKAFLINGNLNRTLHVFTNMLRNGLSPD--NYTIPYALKACAALRDHSL---GEMI 127
NT++ A G ++ + M + P+ +Y+ A A D +L GEM
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLS----AVSWSLMISGYAK 183
+ LG+ D N+L+++Y G A + E+ S+ V+++ ++ GY K
Sbjct: 437 Y-----LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 184 VGDVDLARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
G D + F E + + + +I GY + +KE + +FR + + D +
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVL 551
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLA-------- 291
+ +++ A G + + V + + + + ++ S++D + + +D +
Sbjct: 552 YSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGS 611
Query: 292 --------KRLFDSMPDRDIVCWNAMISGLAMHG-----DGIGAL----KLFSEMEKLGI 334
L ++ +R I + + + +G+ L ++F +M +L I
Sbjct: 612 LPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEI 671
Query: 335 KPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLL--SRTGFFEE 392
KP+ +TF A+ ACS + LL+++ N + YG + LL R + +
Sbjct: 672 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN-----KVYGVVHGLLMGQRENVWLQ 726
Query: 393 AMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAA 433
A + ++ N +GS + + A + GQ + A L A
Sbjct: 727 AQSLFDKV-NEMDGSTASAFYNALTDMLWHFGQKRGAELVA 766
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Query: 273 RLSTSLLDMYAKCGNLDLAKRLFDSM----PDRDIVCWNAMISGLAMHGDGIGALKLFSE 328
+L+++++ + G + +AKR+F++ + ++A+IS G A+ +F+
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 329 MEKLGIKPDDITFIAVFTACSYSGMASEGL-KLLDKMFSVYNMEPKSEHYGCLVDLLSRT 387
M++ G++P+ +T+ AV AC GM + + K D+M ++P + L+ + SR
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM-QRNGVQPDRITFNSLLAVCSRG 352
Query: 388 GFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA-TLAAESLVRLDNPSGL- 445
G +E A + +TN ++ ++ L A C GQ LA + A+ V+ P+ +
Sbjct: 353 GLWEAARNLFDEMTN-RRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 446 YVLISNLYAASGR 458
Y + + +A +GR
Sbjct: 412 YSTVIDGFAKAGR 424
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 128/304 (42%), Gaps = 20/304 (6%)
Query: 213 VQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSI 272
+Q N ++E + + ++ D + + C AL+ VH + P +
Sbjct: 96 IQGN-WREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDV 154
Query: 273 RLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKL 332
++++MY+ C ++D A ++F+ MP+ + M+ +G G A+ LF+ ++
Sbjct: 155 GARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEE 214
Query: 333 GIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEE 392
G KP+ F VF+ C+ +G EG M+ Y + P EHY + +L+ +G +E
Sbjct: 215 GNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDE 274
Query: 393 AMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNL 452
A+ + R+ + W ++ HG +L AE + +LD V + L
Sbjct: 275 ALNFVERMPMEPSVD----VWETLMNLSRVHGDVELGDRCAELVEKLDATRLDKVSSAGL 330
Query: 453 YAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKM 512
A + D +K K P S F + +HPQM+ I+ L +
Sbjct: 331 VAT--------KASDFVK-----KEPSTRSEPY--FYSTFRPVDSSHPQMNIIYETLMSL 375
Query: 513 HLQL 516
QL
Sbjct: 376 RSQL 379
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 167/416 (40%), Gaps = 56/416 (13%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
NT++ + G ++ V+ ML + + P+ YT + L + E + Y SK
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGN---VEEANQYVSK 243
Query: 134 L---GLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP----SLSAVSWSLMISGYAKVGD 186
+ GL D F SLI YC D+ +A KVF+E+P + V+++ +I G
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 187 VDLARLFF----DETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFV- 241
+D A F D+ + +I + E L L + M+ T I P+ +
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 242 ---SILSACA-------------------------------HMGALDTGVWVHRYLNRAR 267
S+ S C G ++ V V + +
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 268 LPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGAL 323
L + R L+ Y K N+ A + + M +R D+V +N++I G G+ A
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 324 KLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDL 383
+L S M G+ PD T+ ++ + S E L D + + P Y L+D
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL-EQKGVNPNVVMYTALIDG 541
Query: 384 LSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRL 439
+ G +EA +++ ++ S N +L + A + C G+ + ATL E +V++
Sbjct: 542 YCKAGKVDEAHLMLEKML-SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 157/375 (41%), Gaps = 17/375 (4%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKA-CAALRDHSLGEM 126
PTV +IK+ + + L++ M G+ P+ +T + + C+ + E+
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL----SAVSWSLMISGYA 182
+ G + GL+ ++ N+LI YC G + A V + + S + +++ +I GY
Sbjct: 381 L-GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 439
Query: 183 KVGDVDLARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDES 238
K +V A ++ E+ D + ++I G ++ F L LM + PD+
Sbjct: 440 K-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 239 IFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM 298
+ S++ + ++ + L + + ++ + T+L+D Y K G +D A + + M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 299 PDRDI----VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMA 354
++ + +NA+I GL G A L +M K+G++P T + G
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 355 SEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWR 414
+M S +P + Y + R G +A ++ ++ N S + +
Sbjct: 619 DHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM-RENGVSPDLFTYS 676
Query: 415 AFLSACCNHGQAQLA 429
+ + + GQ A
Sbjct: 677 SLIKGYGDLGQTNFA 691
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/446 (18%), Positives = 158/446 (35%), Gaps = 61/446 (13%)
Query: 43 VLAFCSHPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLS 102
+ +C ++ K+ +R P V N++I +GN + + + M GL
Sbjct: 435 IKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 103 PDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKV 162
PD +T Y+S + D + + C D + + V
Sbjct: 495 PDQWT----------------------YTS----MIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 163 FDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEK----DKGIWGAMISGYVQNNCF 218
+ + V ++ +I GY K G VD A L ++ K + + A+I G +
Sbjct: 529 -----NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 219 KEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSL 278
KE L M + P S ++ G D + + + T+
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 279 LDMYAKCGNL----DLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGI 334
+ Y + G L D+ ++ ++ D+ ++++I G G A + M G
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 335 KPDDITFIAVFT----------------ACSYSGMAS--EGLKLLDKMFSVYNMEPKSEH 376
+P TF+++ C+ S M ++LL+KM +++ P ++
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE-HSVTPNAKS 762
Query: 377 YGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESL 436
Y L+ + G A + + + S L + A LS CC + A + +
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Query: 437 V---RLDNPSGLYVLISNLYAASGRH 459
+ L VLI LY +
Sbjct: 823 ICVGHLPQLESCKVLICGLYKKGEKE 848
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 161/362 (44%), Gaps = 22/362 (6%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRN-GLSPDNYTIPYA 111
G + A +F RI P + I NT+I F+ +G L+ V ++M+ + G+ PD T Y
Sbjct: 336 GRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT--YN 393
Query: 112 LKACAALRDHSLG---EMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPS 168
++ +G E++H +K G +++ L+ +C G + A V +E+ +
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNK-GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 169 ----LSAVSWSLMISGYAKVGDVDLARLFFDETPEK----DKGIWGAMISGYVQNNCFKE 220
+ V ++ +IS + K + A F E P K D + ++ISG + + K
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 221 GLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLD 280
L+L R M + + + ++++A G + + + PL SL+
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 281 MYAKCGNLDLAKRLFDSM-----PDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIK 335
+ G +D A+ LF+ M +I C N +I+GL G A++ EM G
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISC-NILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 336 PDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMV 395
PD +TF ++ +G +GL + K+ + P + + L+ L + GF +A +
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKL-QAEGIPPDTVTFNTLMSWLCKGGFVYDACL 690
Query: 396 II 397
++
Sbjct: 691 LL 692
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 165/386 (42%), Gaps = 23/386 (5%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNY---TIPYALKACAALRD--HS 122
PT+ ++KAF ++ L + +M ++G P++ T+ ++L C + +
Sbjct: 215 PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQL 274
Query: 123 LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP----SLSAVSWSLMI 178
L EM +G + D N +I C F + A K+ + + + +++ ++
Sbjct: 275 LEEMFL-----MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329
Query: 179 SGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT-DIGPDE 237
+G K+G VD A+ F P+ + I+ +I G+V + + + M + I PD
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389
Query: 238 SIFVSILSACAHMGALDTGVWV-HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFD 296
+ S++ G + + V H N+ P ++ T L+D + K G +D A + +
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP-NVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 297 SMP----DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
M + V +N +IS A+++F EM + G KPD TF ++ +
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 353 MASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLA 412
L LL M S + + Y L++ R G +EA ++ + + +E +
Sbjct: 509 EIKHALWLLRDMIS-EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE-IT 566
Query: 413 WRAFLSACCNHGQAQLATLAAESLVR 438
+ + + C G+ A E ++R
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLR 592
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 120/278 (43%), Gaps = 15/278 (5%)
Query: 152 VFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLA-RLFFDETPE---KDKGIWGA 207
VF DM++ RK+ P+L ++ +++ + V ++D A L D T + I+
Sbjct: 204 VFYDMLS-RKI---PPTL--FTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQT 257
Query: 208 MISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVS-ILSACAHMGALDTGVWVHRYLNRA 266
+I + N E L L M L PD F IL C + V+R L R
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 317
Query: 267 RLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLF 326
P I L++ K G +D AK LF +P +IV +N +I G HG A +
Sbjct: 318 FAPDDITYGY-LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 327 SEM-EKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLS 385
S+M GI PD T+ ++ G+ L++L M + +P Y LVD
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN-KGCKPNVYSYTILVDGFC 435
Query: 386 RTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNH 423
+ G +EA ++ ++ ++ T+ + +SA C
Sbjct: 436 KLGKIDEAYNVLNEMS-ADGLKPNTVGFNCLISAFCKE 472
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 154/374 (41%), Gaps = 17/374 (4%)
Query: 43 VLAFCSHPHQGSLTYACK-VFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGL 101
++A + Y K + +R P V N +I A G +N+ V +M G
Sbjct: 195 MIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGC 254
Query: 102 SPDNYTIPYALKACAAL--------RDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVF 153
SP+ + + L D L EM+ S F+I + + +
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI-DGFWKDDNLP 313
Query: 154 GDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETP----EKDKGIWGAMI 209
G M +++ D+ + +S++ +I+G G + A D+ + + + A+I
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 210 SGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLP 269
+G+ +N+ KE L +F ++ P ++ ++ A +G +D G + + R +
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 270 LSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR---DIVCWNAMISGLAMHGDGIGALKLF 326
+ L+ + GN++ AK+LFD + + D+V ++ ++ G G+ A L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 327 SEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSR 386
EM K+G+KP +T+ V G + +M + Y L+ S+
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Query: 387 TGFFEEAMVIIRRI 400
G E+A +++ +
Sbjct: 554 KGKLEDANMLLNEM 567
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 123/317 (38%), Gaps = 24/317 (7%)
Query: 45 AFCSHPHQGSLTYACKVFQRIQH----PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNG 100
+C G + A V + + P + N +I F + NL ++ VF ML
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 101 LSPDNYTIPYALKACAALRDHSLGEMIHGYSSKL--GLLFDIFVGNSLIAMYCVFGDMVA 158
+ P+ I Y + E I + G+ ++ N+LI +C +
Sbjct: 327 VKPN--VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKE 384
Query: 159 ARKVFDEIPSLSAVS----WSLMISGYAKVGDVDLARLFFDETPEK----DKGIWGAMIS 210
A +F + AV ++++I Y K+G +D +E + D G + +I+
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Query: 211 GYVQNNCFKEGLYLFRLMQLTDIG-PDESIFVSILSACAHMGALDTGVWVHRYLNRARLP 269
G +N + LF QLT G PD F ++ G + + +++ L
Sbjct: 445 GLCRNGNIEAAKKLFD--QLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 270 LSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR-----DIVCWNAMISGLAMHGDGIGALK 324
++ Y K GNL A + M ++ +N ++ G + G A
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 325 LFSEMEKLGIKPDDITF 341
L +EM + G+ P+ IT+
Sbjct: 563 LLNEMLEKGLVPNRITY 579
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 170/404 (42%), Gaps = 28/404 (6%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH- 67
L+L++K ++ L QAH F G+ + + L + + ++++A VF+ +
Sbjct: 147 LSLIDKALSIVHLAQAHG--FMPGVLSYNAVLDATIR-----SKRNISFAENVFKEMLES 199
Query: 68 ---PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLG 124
P V N +I+ F GN++ L +F M G P+ T + LR G
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 125 EMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP----SLSAVSWSLMISG 180
+ + GL ++ N +I C G M V E+ SL V+++ +I G
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 181 YAKVGDVDLARLFFDE------TPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIG 234
Y K G+ A + E TP + ++I + + M++ +
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVI--TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377
Query: 235 PDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRL 294
P+E + +++ + G ++ V R +N S+ +L++ + G ++ A +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 295 FDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSY 350
+ M ++ D+V ++ ++SG D AL++ EM + GIKPD IT+ ++
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE 497
Query: 351 SGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
E L ++M V + P Y L++ G E+A+
Sbjct: 498 QRRTKEACDLYEEMLRV-GLPPDEFTYTALINAYCMEGDLEKAL 540
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 143/359 (39%), Gaps = 43/359 (11%)
Query: 159 ARKVFDEI----PSLSAVSWSLMISGYAKVGDVDLARLFFDETPEK----DKGIWGAMIS 210
A VF E+ S + +++++I G+ G++D+A FD+ K + + +I
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 211 GYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPL 270
GY + +G L R M L + P+ + +++ G + +V +NR L
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 271 SIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEME 330
+L+ Y K GN A L MH +EM
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQA---------------------LVMH----------AEML 337
Query: 331 KLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFF 390
+ G+ P IT+ ++ + +G + ++ LD+M V + P Y LVD S+ G+
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM-RVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 391 EEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLIS 450
EA ++R + N N S + + A ++ C G+ + A E + + S V S
Sbjct: 397 NEAYRVLREM-NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYS 454
Query: 451 NLYAASGRHADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSIL 509
+ + R DV V K + V+K ++ ++ F +T D +L
Sbjct: 455 TVLSGFCRSYDVDEALRV-KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 136/339 (40%), Gaps = 21/339 (6%)
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
P + N +I G + V T M R G S D T +K + +
Sbjct: 272 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL----SAVSWSLMISGYA 182
+H + GL + SLI C G+M A + D++ + +++ ++ G++
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 183 KVGDVDLARLFFDETPEKDKGI------WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPD 236
+ G ++ A E D G + A+I+G+ ++ + + M+ + PD
Sbjct: 392 QKGYMNEAYRVLREM--NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 237 ESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFD 296
+ ++LS +D + V R + + +SL+ + + A L++
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 297 SM------PDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSY 350
M PD + A+I+ M GD AL+L +EM + G+ PD +T+ + +
Sbjct: 510 EMLRVGLPPDE--FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 351 SGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGF 389
E +LL K+F ++ P Y L++ S F
Sbjct: 568 QSRTREAKRLLLKLFYEESV-PSDVTYHTLIENCSNIEF 605
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 173/411 (42%), Gaps = 38/411 (9%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQH- 67
L LL + + +++ + + ALS VL ++ GSL+ A +++ +
Sbjct: 106 LKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLH--AYAESGSLSKAVEIYDYVVEL 163
Query: 68 ----PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKA-CAALRDHS 122
P V CN+++ + + L V+ M G S DNY+ +K C +
Sbjct: 164 YDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEV 223
Query: 123 LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEI------PSLSAVSWSL 176
++I G K G + +I N++I YC GD+ A VF E+ P+L ++
Sbjct: 224 GRKLIEGRWGK-GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLE--TFGT 280
Query: 177 MISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNC----FKEGLYL-----FRL 227
MI+G+ K GD + E E+ G +S + NN ++ G +
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKER-----GLRVSVWFLNNIIDAKYRHGYKVDPAESIGW 335
Query: 228 MQLTDIGPDESIFVSILSACAHMGALDTGV-WVHRYLNRARLPLSIRLSTSLLDMYAKCG 286
+ D PD + + +++ G + V ++ + +P ++ + L+ Y K
Sbjct: 336 IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYA-PLIQAYCKSK 394
Query: 287 NLDLAKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFI 342
D+A +L M +R DIV + +I GL + G A+ + ++ G+ PD +
Sbjct: 395 EYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYN 454
Query: 343 AVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEA 393
+ + +G L +M N+ P + Y L+D R+G F+EA
Sbjct: 455 MLMSGLCKTGRFLPAKLLFSEMLD-RNILPDAYVYATLIDGFIRSGDFDEA 504
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 133/317 (41%), Gaps = 36/317 (11%)
Query: 135 GLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLS----AVSWSLMISGYAKVGDVDLA 190
G+ D + N L++ C G + A+ +F E+ + A ++ +I G+ + GD D A
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 191 RLFFDETPEKDKGI----WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
R F + EK + AMI G+ ++ E L M + PD+ + +I+
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 247 CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRD---- 302
+ T + + RY+ + + ++ TSL++ + G+ +A+ F M RD
Sbjct: 565 YVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPN 624
Query: 303 IVCWNAMISGLAMHGDGI-GALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLL 361
+V + +I LA + A+ + M P+++TF C G K
Sbjct: 625 VVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTF-----NCLLQGFVK---KTS 676
Query: 362 DKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACC 421
K+ + EP ++G ++ F E R+ S+ S+ A+ + L C
Sbjct: 677 GKVLA----EPDGSNHG-------QSSLFSE---FFHRM-KSDGWSDHAAAYNSALVCLC 721
Query: 422 NHGQAQLATLAAESLVR 438
HG + A + + +V+
Sbjct: 722 VHGMVKTACMFQDKMVK 738
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 119/314 (37%), Gaps = 29/314 (9%)
Query: 60 KVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALR 119
K+ R P I N ++ G +F+ ML + PD Y +
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSG 499
Query: 120 DHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAA----RKVFDEIPSLSAVSWS 175
D + S + G+ D+ N++I +C G + A ++ +E ++S
Sbjct: 500 DFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYS 559
Query: 176 LMISGYAKVGDVDLARLFFDETPEKDKG-----IWGAMISGYVQNNCFKEGLYLFRLMQL 230
+I GY K D+ A F EK+K + ++I+G+ FK F+ MQL
Sbjct: 560 TIIDGYVKQQDMATAIKIF-RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQL 618
Query: 231 TDIGPDESIFVSILSACAHMGA-LDTGVWVHRYLNRAR-LPLSIRLSTSLLDMYAKCGNL 288
D+ P+ + +++ + A + L+ V+ + + +P + + L K
Sbjct: 619 RDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGK 678
Query: 289 DLAK---------RLFDSMPDR--------DIVCWNAMISGLAMHGDGIGALKLFSEMEK 331
LA+ LF R +N+ + L +HG A +M K
Sbjct: 679 VLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVK 738
Query: 332 LGIKPDDITFIAVF 345
G PD ++F A+
Sbjct: 739 KGFSPDPVSFAAIL 752
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 169/431 (39%), Gaps = 43/431 (9%)
Query: 19 KQLKQAHAQVFTSGLDNNSFALSRVLAFCS----HPHQGSLTYACKVFQRIQH----PTV 70
K+ + + A +GL + F+L V ++ S + G A VF++++ PT+
Sbjct: 185 KEGRVSSAANMFNGLQEDGFSLD-VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTL 243
Query: 71 CICNTIIKAFLINGN-LNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHG 129
N I+ F G N+ + M +G++PD YT + C H +
Sbjct: 244 ITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFE 303
Query: 130 YSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDL 189
G +D N+L+ +Y A KV +E+ L+ S S++
Sbjct: 304 EMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM-VLNGFSPSIVT----------- 351
Query: 190 ARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAH 249
+ ++IS Y ++ E + L M PD + ++LS
Sbjct: 352 ---------------YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER 396
Query: 250 MGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP----DRDIVC 305
G +++ + + + A +I + + MY G ++FD + DIV
Sbjct: 397 AGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVT 456
Query: 306 WNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMF 365
WN +++ +G +F EM++ G P+ TF + +A S G + + + +M
Sbjct: 457 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML 516
Query: 366 SVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQ 425
+ P Y ++ L+R G +E++ ++ + + E L + + L A N +
Sbjct: 517 DA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE-LTYCSLLHAYANGKE 574
Query: 426 AQLATLAAESL 436
L AE +
Sbjct: 575 IGLMHSLAEEV 585
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/368 (18%), Positives = 139/368 (37%), Gaps = 17/368 (4%)
Query: 51 HQGSLTYACKVFQRIQ----HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNY 106
++G T K+F I P + NT++ F NG + VF M R G P+
Sbjct: 431 NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490
Query: 107 TIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEI 166
T + A + ++ G+ D+ N+++A G + KV E+
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Query: 167 P----SLSAVSWSLMISGYAKVGDV----DLARLFFDETPEKDKGIWGAMISGYVQNNCF 218
+ +++ ++ YA ++ LA + E + ++ + +
Sbjct: 551 EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLL 610
Query: 219 KEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSL 278
E F ++ PD + S++S + V Y+ S+ SL
Sbjct: 611 PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 279 LDMYAKCGNLDLAKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGI 334
+ M+++ + ++ + + + DI+ +N +I + A ++FSEM GI
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Query: 335 KPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
PD IT+ + + M E + ++ M + P Y +VD + +EA
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIVDGYCKLNRKDEAK 789
Query: 395 VIIRRITN 402
+ + + N
Sbjct: 790 LFVEDLRN 797
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 125/299 (41%), Gaps = 41/299 (13%)
Query: 49 HPHQGSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTI 108
H G L ++F R+ H + + G+ +F +ML++ + I
Sbjct: 133 HVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHS-QKGAFKI 191
Query: 109 PY-----ALKACAALRDHSLGEMIHGYSSKLGLL--FDIFVGNSLIAMYCVFGDMVAARK 161
P LKACA +RD LG+ +H KLG + D ++ SLI Y F + A
Sbjct: 192 PSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANL 251
Query: 162 VFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEG 221
V ++ + + V+W+ ++ + G+ F+E
Sbjct: 252 VLHQLSNANTVAWAAKVTNDYREGE-------------------------------FQEV 280
Query: 222 LYLFRLMQLTDIGPDESIFVSILSACAHMG-ALDTGVWVHRYLNRARLPLSIRLSTSLLD 280
+ F M I + S+F ++L AC+ + +G VH + + L++
Sbjct: 281 IRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIE 340
Query: 281 MYAKCGNLDLAKRLFDSMPDR-DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDD 338
MY K G + A+++F S D + CWNAM++ +G I A+KL +M+ GIK D
Sbjct: 341 MYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHD 399
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 8/190 (4%)
Query: 167 PSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFR 226
P+++ ++ L++ + G +D+ R FD P +D W + G ++ +++ +LF
Sbjct: 121 PTITFINRLLLM--HVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFV 178
Query: 227 LM----QLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARL--PLSIRLSTSLLD 280
M Q I +L ACA + + G VH ++ LS SL+
Sbjct: 179 SMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIR 238
Query: 281 MYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDIT 340
Y + L+ A + + + + V W A ++ G+ ++ F EM GIK +
Sbjct: 239 FYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSV 298
Query: 341 FIAVFTACSY 350
F V ACS+
Sbjct: 299 FSNVLKACSW 308
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 14/211 (6%)
Query: 224 LFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYA 283
+ RLM + +E I+ + A + ++ ++ + +I LL M+
Sbjct: 75 ILRLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHV 134
Query: 284 KCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEM----EKLGIKPDDI 339
CG LD+ +++FD MP RD W + G GD A LF M +K K
Sbjct: 135 SCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSW 194
Query: 340 TFIAVFTACSY---SGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVI 396
V AC+ + + L K+ + E S G L+ E+A ++
Sbjct: 195 ILGCVLKACAMIRDFELGKQVHALCHKLGFID--EEDSYLSGSLIRFYGEFRCLEDANLV 252
Query: 397 IRRITNSNNGSEETLAWRAFLSACCNHGQAQ 427
+ +++N+N T+AW A ++ G+ Q
Sbjct: 253 LHQLSNAN-----TVAWAAKVTNDYREGEFQ 278
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 144/348 (41%), Gaps = 22/348 (6%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTI-PYALKACAALR-DHSLGE 125
PT+ NT+++ F + G + + + M G PD T P C R L E
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLRE 317
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV----SWSLMISGY 181
M ++GL+ D N LI GD+ A DE+ V +++ +I G
Sbjct: 318 M-----KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372
Query: 182 AKVGDVDLARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDE 237
++ A + E EK D + +I+GY Q+ K+ L M I P +
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432
Query: 238 SIFVSILSA-CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFD 296
+ S++ C + + + + P + ++T L+D + GN+D A L
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT-LMDGHCAIGNMDRAFSLLK 491
Query: 297 SMP----DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSG 352
M + D V +N ++ GL G A +L EM++ GIKPD I++ + + S G
Sbjct: 492 EMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 551
Query: 353 MASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRI 400
+ D+M S+ P Y L+ LS+ E A ++R +
Sbjct: 552 DTKHAFMVRDEMLSL-GFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 119/294 (40%), Gaps = 12/294 (4%)
Query: 85 NLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGN 144
N R V M GL PD+ + ++ C+ D + K G++ + N
Sbjct: 307 NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYN 366
Query: 145 SLIAMYCVFGDMVAARKVFDEIPS----LSAVSWSLMISGYAKVGDVDLARLFFDETP-- 198
+LI + + AA + EI L +V+++++I+GY + GD A DE
Sbjct: 367 TLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTD 426
Query: 199 --EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTG 256
+ + + ++I + N +E LF + + PD + +++ +G +D
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA 486
Query: 257 VWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI----VCWNAMISG 312
+ + ++ + L+ G + A+ L M R I + +N +ISG
Sbjct: 487 FSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG 546
Query: 313 LAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
+ GD A + EM LG P +T+ A+ S + +LL +M S
Sbjct: 547 YSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 119/289 (41%), Gaps = 14/289 (4%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSK 133
N +I+ NG+L M++ G+ P YT + E++ +
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 134 LGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPS----LSAVSWSLMISGYAKVGDVDL 189
G++ D N LI YC GD A + DE+ + + +++ +I +
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 190 ARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILS 245
A F++ K D + ++ G+ L + M + I PD+ + ++
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510
Query: 246 ACAHMGALDTGVWVHRYLNRARL-PLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP----D 300
G + + + R + P I +T L+ Y+K G+ A + D M +
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGIKPDHISYNT-LISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 301 RDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACS 349
++ +NA++ GL+ + +G A +L EM+ GI P+D +F +V A S
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 173/418 (41%), Gaps = 52/418 (12%)
Query: 51 HQGSLTYA--CKVFQRIQ-HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYT 107
H G + + +VF+ PTV + I+K + G + LHVF NM G P +
Sbjct: 135 HSGFVVWGELVRVFKEFSFSPTVF--DMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLS 192
Query: 108 IPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP 167
L ++ + ++ + D+F + ++ YC G++ A E
Sbjct: 193 CNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETE 252
Query: 168 S-----LSAVSWSLMISGYAKVGDVD----LARLFFDETPEKDKGIWGAMISGYVQNNCF 218
S L+ V+++ +I+GYA +GDV+ + RL + ++ + ++I GY +
Sbjct: 253 SSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLM 312
Query: 219 KEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSL 278
+E ++F L++ + D+ ++ ++ G + V VH + + + +R +T+
Sbjct: 313 EEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNM----IEIGVRTNTT- 367
Query: 279 LDMYAKCGNLDLAKRLFDSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDD 338
+C N++I+G G + A ++FS M +KPD
Sbjct: 368 -------------------------IC-NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH 401
Query: 339 ITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM---- 394
T+ + +G E LKL D+M + P Y L+ SR G F + +
Sbjct: 402 HTYNTLVDGYCRAGYVDEALKLCDQMCQ-KEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 460
Query: 395 VIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGLYVLISNL 452
++++R N++ S TL F N + A L L + L V+IS L
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL--LTDTITLNVMISGL 516
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 148/335 (44%), Gaps = 17/335 (5%)
Query: 49 HPHQGSLTYACKVFQRIQH----PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPD 104
+ +G + A VF + + P++ CN+++ + G LHV+ M+ +SPD
Sbjct: 165 YAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPD 224
Query: 105 NYTIPYALKA-CAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVF 163
+T + A C + S LGL ++ NSLI Y + GD+ +V
Sbjct: 225 VFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVL 284
Query: 164 ----DEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEK----DKGIWGAMISGYVQN 215
+ S + V+++ +I GY K G ++ A F+ EK D+ ++G ++ GY +
Sbjct: 285 RLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRT 344
Query: 216 NCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLS 275
++ + + M + + +I S+++ G L + +N L
Sbjct: 345 GQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTY 404
Query: 276 TSLLDMYAKCGNLDLAKRLFDSMPDRDIV----CWNAMISGLAMHGDGIGALKLFSEMEK 331
+L+D Y + G +D A +L D M +++V +N ++ G + G L L+ M K
Sbjct: 405 NTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 332 LGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFS 366
G+ D+I+ + A G +E +KL + + +
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 499
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 160/405 (39%), Gaps = 50/405 (12%)
Query: 14 KCKNMKQLKQAHAQVFTSGLDNNSFALSRVL-AFCSHPHQGSLTYACKVFQRI----QHP 68
+C+ + A ++ G + ++ S ++ C +G ++ A ++ R+ P
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC---LEGRVSEALELVDRMVEMGHKP 175
Query: 69 TVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKA-CAALRDHSLGEMI 127
T+ N ++ +NG ++ + + M+ G P+ T LK C +
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS---------- 225
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDV 187
G + +AM + RK+ + L AV +S++I G K G +
Sbjct: 226 ---------------GQTALAMELL-------RKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 188 DLARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSI 243
D A F+E K D I+ +I G+ + +G L R M I PD F ++
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 244 LSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR-- 301
+ G L +H+ + + + TSL+D + K LD A + D M +
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 302 --DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK 359
+I +N +I+G L+LF +M G+ D +T+ + G +
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 360 LLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSN 404
L +M S + P Y L+D L G E+A+ I +I S
Sbjct: 444 LFQEMVS-RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 140/334 (41%), Gaps = 24/334 (7%)
Query: 51 HQGSLTYACKVFQRIQ----HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNY 106
GSL A +F ++ + I T+I+ F G + + +M++ ++PD
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 107 TIPYALKAC----AALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKV 162
AL C LR+ E +H + G+ D SLI +C + A +
Sbjct: 319 AFS-ALIDCFVKEGKLRE---AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 163 FDEIPSL----SAVSWSLMISGYAKVGDVDLARLFFDETPEK----DKGIWGAMISGYVQ 214
D + S + +++++I+GY K +D F + + D + +I G+ +
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 215 NNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRL 274
+ LF+ M + PD + +L G + + + + ++++ L I +
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 275 STSLLDMYAKCGNLDLAKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEME 330
++ +D A LF S+P + D+ +N MI GL G A LF +ME
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 331 KLGIKPDDITFIAVFTACSYSGMASEGLKLLDKM 364
+ G P+ T+ + A G A++ KL++++
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 143/361 (39%), Gaps = 14/361 (3%)
Query: 89 TLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIA 148
L + M G++ + YT+ + C R SL G KLG D ++LI
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150
Query: 149 MYCVFGDMVAARKVFDEIPSL----SAVSWSLMISGYAKVGDVDLARLFFDETPEK---- 200
C+ G + A ++ D + + + ++ + +++G G V A L D E
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210
Query: 201 DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVH 260
++ +G ++ ++ + L R M+ I D + I+ G+LD +
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270
Query: 261 RYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR----DIVCWNAMISGLAMH 316
+ I + T+L+ + G D +L M R D+V ++A+I
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKE 330
Query: 317 GDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEH 376
G A +L EM + GI PD +T+ ++ + +LD M S P
Sbjct: 331 GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS-KGCGPNIRT 389
Query: 377 YGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESL 436
+ L++ + ++ + + R+++ +T+ + + C G+ ++A + +
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMS-LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 437 V 437
V
Sbjct: 449 V 449
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 166/395 (42%), Gaps = 25/395 (6%)
Query: 48 SHPHQGSLTYACKVFQRIQ----HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSP 103
S+ G A ++F ++ PT I T++ + G + + L +F M R G SP
Sbjct: 242 SYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSP 301
Query: 104 DNYTIPYALKACAALRDHSLGEMIHGYSSKL--GLLFDIFVGNSLIAMYCVFGDMVAARK 161
YT +K + + E Y L GL D+ N+L+ + G +
Sbjct: 302 TVYTYTELIKGLG--KAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTN 359
Query: 162 VFDEIP----SLSAVSWSLMISG-YAKVGDVDLARLFFD----ETPEKDKGIWGAMISGY 212
VF E+ + + VS++ +I + V +FD ++ + + +I GY
Sbjct: 360 VFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGY 419
Query: 213 VQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSI 272
+ N ++ L L M P + + S+++A + + + L +S
Sbjct: 420 CKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSS 479
Query: 273 RLSTSLLDMYAKCGNLDLAKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSE 328
R+ ++ + KCG L A LF+ M ++ D+ +NA++SG+ G A L +
Sbjct: 480 RVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRK 539
Query: 329 MEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTG 388
ME+ G + D + + + +G+ +++ + + ++P Y L+ + G
Sbjct: 540 MEENGCRADINSHNIILNGFARTGVPRRAIEMFETI-KHSGIKPDGVTYNTLLGCFAHAG 598
Query: 389 FFEEAMVIIRRITNSNNGSE-ETLAWRAFLSACCN 422
FEEA ++R + + G E + + + + L A N
Sbjct: 599 MFEEAARMMREM--KDKGFEYDAITYSSILDAVGN 631
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 109/274 (39%), Gaps = 15/274 (5%)
Query: 144 NSLIAMYCVFGDMVAARKVFDEIPS-----LSAVSWSLMISGYAKVGDVDLARLFFDETP 198
NS+I M G +V+ E+ + +++S +IS Y K+G D A FDE
Sbjct: 201 NSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK 260
Query: 199 ----EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALD 254
+ + I+ ++ Y + ++ L LF M+ P + ++ G +D
Sbjct: 261 DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVD 320
Query: 255 TGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP----DRDIVCWNAMI 310
++ + R L + +L+++ K G ++ +F M +V +N +I
Sbjct: 321 EAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVI 380
Query: 311 SGLAMHGDGIGAL-KLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYN 369
L + + F +M+ + P + T+ + + + L LL++M
Sbjct: 381 KALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM-DEKG 439
Query: 370 MEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNS 403
P Y L++ L + +E A + + + +
Sbjct: 440 FPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 163/428 (38%), Gaps = 72/428 (16%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
P N + K F + G ++ V +ML GLSPD I Y + C + LG +
Sbjct: 290 PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPD--VITYTILLCGQCQ---LGNID 344
Query: 128 HGYSSKLGLLFDIFVGNSLI------AMYCVFGDMVAARKVFDEIP----SLSAVSWSLM 177
G +L F NS+I + C G + A +F+++ S V++S++
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 178 ISGYAKVGDVDLARLFFDETPEK------------------------------------- 200
I G K+G D+A +DE +K
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464
Query: 201 --DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVW 258
D ++ +I GY ++ C +E L LF+++ T I P + F S++ +
Sbjct: 465 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARK 524
Query: 259 VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI----VCWNAMISGLA 314
+ + L S+ T+L+D YA CGN L M I V ++ + GL
Sbjct: 525 ILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC 584
Query: 315 ---MHGDGIGALK--LFS-------EMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLD 362
H + L+ +F +ME GI PD IT+ + S L+
Sbjct: 585 RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 644
Query: 363 KMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCN 422
M S N++ S Y L+D L G+ +A I + N S A+ + A C
Sbjct: 645 IMKS-RNLDASSATYNILIDSLCVYGYIRKADSFIYSL-QEQNVSLSKFAYTTLIKAHCV 702
Query: 423 HGQAQLAT 430
G ++A
Sbjct: 703 KGDPEMAV 710
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 142/342 (41%), Gaps = 41/342 (11%)
Query: 56 TYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKAC 115
++ C V + P+V N +I + G++ L + ++M ++G+ PD+ T K
Sbjct: 243 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK-- 300
Query: 116 AALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWS 175
G L+ M + G R + D+ S ++++
Sbjct: 301 ---------------------------GFHLLGM--ISGAWEVIRDMLDKGLSPDVITYT 331
Query: 176 LMISGYAKVGDVDLARLFFDETPEKDKGI-----WGAMISGYVQNNCFKEGLYLFRLMQL 230
+++ G ++G++D+ + + + + M+SG + E L LF M+
Sbjct: 332 ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKA 391
Query: 231 TDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDL 290
+ PD + ++ +G D +W++ + R+ + R +LL + G L
Sbjct: 392 DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLE 451
Query: 291 AKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFT 346
A+ L DS+ DIV +N +I G A G AL+LF + + GI P TF ++
Sbjct: 452 ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Query: 347 ACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTG 388
+ +E K+LD + +Y + P Y L+D + G
Sbjct: 512 GYCKTQNIAEARKILD-VIKLYGLAPSVVSYTTLMDAYANCG 552
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 163/429 (37%), Gaps = 72/429 (16%)
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
P N + K F + G ++ V +ML GLSPD I Y + C + LG +
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPD--VITYTILLCGQCQ---LGNI 343
Query: 127 IHGYSSKLGLLFDIFVGNSLI------AMYCVFGDMVAARKVFDEIP----SLSAVSWSL 176
G +L F NS+I + C G + A +F+++ S V++S+
Sbjct: 344 DMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403
Query: 177 MISGYAKVGDVDLARLFFDETPEK------------------------------------ 200
+I G K+G D+A +DE +K
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Query: 201 ---DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGV 257
D ++ +I GY ++ C +E L LF+++ T I P + F S++ +
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 523
Query: 258 WVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI----VCWNAMISGL 313
+ + L S+ T+L+D YA CGN L M I V ++ + GL
Sbjct: 524 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 583
Query: 314 AM---HGDGIGALK--LFS-------EMEKLGIKPDDITFIAVFTACSYSGMASEGLKLL 361
H + L+ +F +ME GI PD IT+ + S L
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 362 DKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACC 421
+ M S N++ S Y L+D L G+ +A I + N S A+ + A C
Sbjct: 644 EIMKS-RNLDASSATYNILIDSLCVYGYIRKADSFIYSL-QEQNVSLSKFAYTTLIKAHC 701
Query: 422 NHGQAQLAT 430
G ++A
Sbjct: 702 VKGDPEMAV 710
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 142/342 (41%), Gaps = 41/342 (11%)
Query: 56 TYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKAC 115
++ C V + P+V N +I + G++ L + ++M ++G+ PD+ T K
Sbjct: 243 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK-- 300
Query: 116 AALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWS 175
G L+ M + G R + D+ S ++++
Sbjct: 301 ---------------------------GFHLLGM--ISGAWEVIRDMLDKGLSPDVITYT 331
Query: 176 LMISGYAKVGDVDLARLFFDETPEKDKGI-----WGAMISGYVQNNCFKEGLYLFRLMQL 230
+++ G ++G++D+ + + + + M+SG + E L LF M+
Sbjct: 332 ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKA 391
Query: 231 TDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDL 290
+ PD + ++ +G D +W++ + R+ + R +LL + G L
Sbjct: 392 DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLE 451
Query: 291 AKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFT 346
A+ L DS+ DIV +N +I G A G AL+LF + + GI P TF ++
Sbjct: 452 ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Query: 347 ACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTG 388
+ +E K+LD + +Y + P Y L+D + G
Sbjct: 512 GYCKTQNIAEARKILD-VIKLYGLAPSVVSYTTLMDAYANCG 552
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 166/408 (40%), Gaps = 27/408 (6%)
Query: 11 LLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQGSLTYACKVFQRIQHPTV 70
+L CK M +LK ++T + N F R L + + K+ + P
Sbjct: 107 VLALCKQM-ELKGIAHNLYTLSIMINCFCRCRKLCL-------AFSAMGKIIKLGYEPNT 158
Query: 71 CICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGY 130
+T+I + G ++ L + M+ G PD TI + + ++
Sbjct: 159 ITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDK 218
Query: 131 SSKLGLLFDIFVGNSLIAMYCVFGDMVAA----RKVFDEIPSLSAVSWSLMISGYAKVGD 186
+ G + ++ + C G A RK+ + L AV +S++I G K G
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 187 VDLARLFFDETPEKDKGI------WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIF 240
+D A F+E + KGI + +I G+ + +G L R M I P+ F
Sbjct: 279 LDNAFNLFNEM--EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 241 VSILSACAHMGALDTGVWVHR-YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
++ + G L +H+ ++R P +I TSL+D + K +LD A ++ D M
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY-TSLIDGFCKENHLDKANQMVDLMV 395
Query: 300 ----DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMAS 355
D +I +N +I+G L+LF +M G+ D +T+ + G +
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 356 EGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNS 403
+L +M S + P Y L+D L G E+A+ I +I S
Sbjct: 456 VAKELFQEMVS-RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 136/336 (40%), Gaps = 19/336 (5%)
Query: 45 AFCSHPHQGSLTYACKVFQRIQ----HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNG 100
C H GSL A +F ++ + N +I F G + + +M++
Sbjct: 272 GLCKH---GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 101 LSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAAR 160
++P+ T + + E +H G+ D SLI +C + A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 161 KVFDEIPSL----SAVSWSLMISGYAKVGDVDLARLFFDETPEK----DKGIWGAMISGY 212
++ D + S + +++++I+GY K +D F + + D + +I G+
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 213 VQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSI 272
+ LF+ M + P+ + +L G + + + + ++++ L I
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 273 RLSTSLLDMYAKCGNLDLAKRLFDSMPDRDIV----CWNAMISGLAMHGDGIGALKLFSE 328
+ ++ +D A LF S+P + + +N MI GL G A LF +
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 329 MEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKM 364
ME+ G PD T+ + A G A++ +KL++++
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 135/295 (45%), Gaps = 18/295 (6%)
Query: 220 EGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLL 279
+ + LFR M + P F + SA A D + + + + + ++ + ++
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 280 DMYAKCGNLDLAKRLFDSMP-------DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKL 332
+ + +C L LA F +M + + + ++ +I+GL + G AL+L M ++
Sbjct: 131 NCFCRCRKLCLA---FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 333 GIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEE 392
G KPD IT + SG +E + L+DKM Y +P + YG +++++ ++G
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE-YGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 393 AMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA-TLAAESLVR-LDNPSGLYVLIS 450
AM ++R++ N + + + + C HG A L E ++ + Y ++
Sbjct: 247 AMELLRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 451 NLYAASGRHAD-VRRVRDVMKNKRVDKAPGCSSVEIDGVVME--FIAGEKTHPQM 502
+ +GR D + +RD++K ++++ SV ID V E E+ H +M
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIK-RKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/404 (17%), Positives = 154/404 (38%), Gaps = 18/404 (4%)
Query: 58 ACKVFQRIQH----PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALK 113
A +F+ + H PTV + + A + L + M G++ + YT+ +
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 114 ACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL---- 169
R L G KLG + ++LI C+ G + A ++ D + +
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 170 SAVSWSLMISGYAKVGDVDLARLFFDETPE----KDKGIWGAMISGYVQNNCFKEGLYLF 225
++ + +++G G A L D+ E + +G +++ ++ + L
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 226 RLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKC 285
R M+ +I D + I+ G+LD + + + +I L+ +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 286 GNLDLAKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITF 341
G D +L M R ++V ++ +I G A +L EM GI PD IT+
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 342 IAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRIT 401
++ + +++D M S +P + L++ + ++ + + R+++
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVS-KGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 402 NSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLDNPSGL 445
+T+ + + C G+ +A + +V P +
Sbjct: 431 -LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 162/382 (42%), Gaps = 58/382 (15%)
Query: 51 HQGSLTYACKVFQRIQ----HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNY 106
+G + A + ++++ V I TII A N+N L++FT M G+ P+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 107 TIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEI 166
T NSLI C +G A ++ ++
Sbjct: 292 TY-----------------------------------NSLIRCLCNYGRWSDASRLLSDM 316
Query: 167 PSL----SAVSWSLMISGYAKVGDVDLARLFFDETPEK----DKGIWGAMISGYVQNNCF 218
+ V++S +I + K G + A +DE ++ D + ++I+G+ ++
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 219 KEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSL 278
E ++F LM D P+ + +++ ++ G+ + R +++ L + +L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 279 LDMYAKCGNLDLAKRLF-----DSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLG 333
+ + G+ D+A+++F D +P DI+ ++ ++ GL +G AL +F ++K
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPP-DIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 334 IKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEA 393
++PD T+ + +G +G L + S+ ++P Y ++ R G EEA
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 394 MVIIRRI----TNSNNGSEETL 411
+ R + T N+G+ TL
Sbjct: 555 DALFREMKEDGTLPNSGTYNTL 576
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 157/371 (42%), Gaps = 25/371 (6%)
Query: 9 LTLLEKCKNMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPH-QGSLTYACKVFQRIQH 67
L+LL+K + K +A ++T+ +D A C++ + +L ++ +
Sbjct: 240 LSLLKKMEKGKI--EADVVIYTTIID----------ALCNYKNVNDALNLFTEMDNKGIR 287
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
P V N++I+ G + + ++M+ ++P+ T + A E +
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL----SAVSWSLMISGYAK 183
+ K + DIF +SLI +C+ + A+ +F+ + S + V+++ +I G+ K
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 184 VGDVDLARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
V+ F E ++ + + +I G Q +F+ M + PD
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
+ +L G L+ + V YL ++++ I +++ K G ++ LF S+
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 300 DR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMAS 355
+ +++ + MISG G A LF EM++ G P+ T+ + A G +
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 587
Query: 356 EGLKLLDKMFS 366
+L+ +M S
Sbjct: 588 ASAELIKEMRS 598
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 132/339 (38%), Gaps = 13/339 (3%)
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
P NT+I ++ + + + M+ G PD +T + D L
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL----SAVSWSLMISGYA 182
+ K + D+ + ++I C + ++ A +F E+ + + V+++ +I
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 183 KVGD-VDLARLFFDETPEK---DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDES 238
G D +RL D K + + A+I +V+ E L+ M I PD
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 239 IFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM 298
+ S+++ LD + + ++ +L+ + K ++ LF M
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 299 PDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMA 354
R + V +N +I GL GD A K+F +M G+ PD IT+ + G
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 355 SEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEA 393
+ L + + + MEP Y +++ + + G E+
Sbjct: 482 EKALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 130/322 (40%), Gaps = 42/322 (13%)
Query: 81 LINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDH----SLGEMIHGYSSKLGL 136
L++ L+ + +F M+++ P L A A + SLGE + L +
Sbjct: 56 LLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN----LRI 111
Query: 137 LFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDE 196
+D++ N LI +C R+ ++P AV +M GY
Sbjct: 112 SYDLYSYNILINCFC--------RR--SQLPLALAVLGKMMKLGY--------------- 146
Query: 197 TPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC-AHMGALDT 255
E D ++++GY E + L M + + P+ F +++ H A +
Sbjct: 147 --EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204
Query: 256 GVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP----DRDIVCWNAMIS 311
+ R + R P T +++ K G++DLA L M + D+V + +I
Sbjct: 205 VALIDRMVARGCQPDLFTYGT-VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263
Query: 312 GLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNME 371
L + + AL LF+EM+ GI+P+ +T+ ++ G S+ +LL M +
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE-RKIN 322
Query: 372 PKSEHYGCLVDLLSRTGFFEEA 393
P + L+D + G EA
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEA 344
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/385 (19%), Positives = 145/385 (37%), Gaps = 17/385 (4%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
P++ N ++ A + + + M +S D Y+ + L +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL----SAVSWSLMISGYAK 183
G KLG DI +SL+ YC + A + D++ + + V+++ +I G
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 184 VGDVDLARLFFDETP----EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
A D + D +G +++G + L L + M+ I D I
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
+ +I+ A + ++ + + ++ + ++ SL+ G A RL M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 300 DR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMAS 355
+R ++V ++A+I G + A KL+ EM K I PD T+ ++
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 356 EGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITN----SNNGSEETL 411
E + + M S + P Y L+ + EE M + R ++ N + TL
Sbjct: 378 EAKHMFELMIS-KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 412 AWRAFLSACCNHGQAQLATLAAESL 436
F + C+ Q + ++ +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGV 461
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 161/401 (40%), Gaps = 55/401 (13%)
Query: 53 GSLTYACKVFQRIQ-HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYA 111
G + A V R+ P V NTI+++ +G L + + V ML+ PD I Y
Sbjct: 186 GEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPD--VITYT 243
Query: 112 LKACAALRDHSLGEMIHGYSS--KLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPS- 168
+ A RD +G + G D+ N L+ C G + A K +++PS
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 169 --------------------------------------LSAVSWSLMISGYAKVGDVDLA 190
S V+++++I+ + G + A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 191 RLFFDETPE----KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSA 246
++ P+ + + ++ G+ + + M PD + ++L+A
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Query: 247 CAHMGALDTGVWVHRYLN-RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI-- 303
G ++ V + L+ + P+ I +T ++D AK G A +L D M +D+
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNT-VIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 304 --VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLL 361
+ +++++ GL+ G A+K F E E++GI+P+ +TF ++ S + L
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Query: 362 DKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITN 402
M + +P Y L++ L+ G +EA+ ++ + N
Sbjct: 543 VFMIN-RGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 162/419 (38%), Gaps = 68/419 (16%)
Query: 35 NNSFALSRVLAFCSHPHQ----GSLTYACKVFQRIQH----PTVCICNTIIKAFLINGNL 86
N+SFAL V + +H Q G L K + + + P + C T+I+ F G
Sbjct: 95 NSSFALEDVESN-NHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153
Query: 87 NRTLHVFTNMLRNGLSPDNYTIPYALKA-CAALRDHSLGEMIHGYS--SKLGLLFDIFVG 143
+ + + +G PD T + C A GE+ + S ++ + D+
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKA------GEINNALSVLDRMSVSPDVVTY 207
Query: 144 NSLIAMYCVFGDMVAARKVFDEIPSL----SAVSWSLMISGYAKVGDVDLARLFFDETPE 199
N+++ C G + A +V D + ++++++I + V A DE +
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
Query: 200 K----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSIL-SACAHMGALD 254
+ D + +++G + E + M + P+ IL S C+ +D
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 255 TGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP--------------- 299
+ L + P S+ L++ + G L A + + MP
Sbjct: 328 AEKLLADMLRKGFSP-SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 300 ---------DR---------------DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIK 335
DR DIV +N M++ L G A+++ +++ G
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 336 PDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
P IT+ V + +G + +KLLD+M +++P + Y LV LSR G +EA+
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREGKVDEAI 504
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 137/347 (39%), Gaps = 15/347 (4%)
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
P + +I F G L+ L M+ GL Y + D S E
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP----SLSAVSWSLMISGYA 182
L + SL+ YC G + A +++ E+ + S +++ ++SG
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 183 KVGDVDLARLFFDETPE----KDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDES 238
+ G + A F+E E ++ + MI GY + + + M I PD
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 239 IFVSILSA-CAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDS 297
+ ++ C A + V+V L++ L+ T LL + + G L+ A +
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDG-LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 298 MPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGM 353
M R D+VC+ +I G H D L EM G+KPDD+ + ++ A S +G
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 354 ASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRI 400
E + D M + P Y +++ L + GF EA V+ ++
Sbjct: 698 FKEAFGIWDLMIN-EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/475 (20%), Positives = 187/475 (39%), Gaps = 63/475 (13%)
Query: 90 LHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLI-- 147
+ +F +M+ G+ PD Y +++ L+D S + + + G +I N LI
Sbjct: 212 MELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDG 271
Query: 148 --------------------------AMYC--VFG-----DMVAARKVFDEI------PS 168
YC V+G + ++ DE+ PS
Sbjct: 272 LCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPS 331
Query: 169 LSAVSWSLMISGYAKVGDVD----LARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYL 224
+AVS ++ G K G ++ L + D + ++ A+I + F E L
Sbjct: 332 EAAVSS--LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 225 FRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAK 284
F M + P++ + ++ G LDT + + L LS+ SL++ + K
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 285 CGNLDLAKRLFDSMPDRD----IVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDIT 340
G++ A+ M ++ +V + +++ G G AL+L+ EM GI P T
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 341 FIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRI 400
F + + +G+ + +KL ++M + +N++P Y +++ G +A ++ +
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 401 TNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVR--LDNPSGLYVLISNLYAASGR 458
T +T ++R + C GQA A + + L + + Y + + + G+
Sbjct: 569 TEKGI-VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 459 HADVRRVRDVMKNKRVDKAPGCSSVEIDGVVMEFIAGEKTHPQMDEIHSILEKMH 513
+ V M + VD C V IDG + H +L++MH
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSL--------KHKDRKLFFGLLKEMH 674
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 135/343 (39%), Gaps = 40/343 (11%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
P+ +++++ G + L++ ++ G+SP+ + + + R E++
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIP----SLSAVSWSLMISGYAK 183
K+GL + + LI M+C G + A E+ LS ++ +I+G+ K
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 184 VGDVDLARLFFDETPEKDKG----IWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
GD+ A F E K + +++ GY + L L+ M I P
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP 299
F ++LS L RA L IR + L + A+ ++ P
Sbjct: 510 FTTLLSG----------------LFRAGL---IRDAVKLFNEMAE----------WNVKP 540
Query: 300 DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLK 359
+R V +N MI G GD A + EM + GI PD ++ + +G ASE
Sbjct: 541 NR--VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 360 LLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITN 402
+D + N E Y L+ R G EEA+ + + +
Sbjct: 599 FVDGLHK-GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 144/338 (42%), Gaps = 29/338 (8%)
Query: 53 GSLTYACKVFQRIQHPTVCICNTIIKAFLINGNLNRT--LH---------VFTNMLRNGL 101
G T K F+R+ +P + +AF RT LH +F M+ +
Sbjct: 8 GIATSTAKGFRRVVNPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQP 67
Query: 102 SPDNYTIPYALKACAALRDHSLGEMIHGYSSKL---GLLFDIFVGNSLIAMYCVFGDMVA 158
P L A A LR + E + +S K+ G+ D++ LI +C +
Sbjct: 68 LPSIVDFTRLLTATANLRRY---ETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSF 124
Query: 159 ARKVFDEIPSL----SAVSWSLMISGYA---KVGDV-DLARLFFDETPEKDKGIWGAMIS 210
A V ++ L S V++ ++ G+ ++GD L L E + ++ +I
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 211 GYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPL 270
G +N L L M+ +G D + ++L+ + G + R + + +
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 271 SIRLSTSLLDMYAKCGNLDLAKRLFDSM----PDRDIVCWNAMISGLAMHGDGIGALKLF 326
+ T+L+D++ K GNLD A+ L+ M D + V +N++I+GL MHG A K F
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304
Query: 327 SEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKM 364
M G P+ +T+ + + M EG+KL +M
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 130/311 (41%), Gaps = 14/311 (4%)
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKA-CAALRDHSLGE 125
P V + NT+I NG LN L + M + GL D T L C + R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSA----VSWSLMISGY 181
M+ K + D+ +LI ++ G++ A++++ E+ S V+++ +I+G
Sbjct: 233 MLRDMM-KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 182 AKVGDVDLARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDE 237
G + A+ FD K + + +ISG+ + EG+ LF+ M D
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 238 SIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDS 297
+ +++ +G L + + ++ R+ I LL G ++ A FD
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 298 MPDRD----IVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGM 353
M + + IV +N MI GL A +LF + G+KPD T+ + +G
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471
Query: 354 ASEGLKLLDKM 364
E +L+ +M
Sbjct: 472 RREADELIRRM 482
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 302 DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLL 361
++V +N +I GL +G+ AL+L +EMEK G+ D +T+ + T YSG S+ ++L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 362 DKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACC 421
M ++ P + L+D+ + G +EA + + + S+ + + + ++ C
Sbjct: 235 RDMMK-RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV-DPNNVTYNSIINGLC 292
Query: 422 NHGQ 425
HG+
Sbjct: 293 MHGR 296
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 161/407 (39%), Gaps = 33/407 (8%)
Query: 45 AFCSHPHQGSLTYACKVFQRIQH----PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNG 100
AFC G + A K+F +++ P V NT+I + G + M+ G
Sbjct: 269 AFCKG---GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 325
Query: 101 LSPDNYTIPYALKACAALRDHSLGE--MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVA 158
+ P I Y++ R +G+ + +K G ++ V N+LI + G +
Sbjct: 326 MEPT--LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 159 ARKVFDEIP----SLSAVSWSLMISGYAKVGDVDLARLFFDETP----EKDKGIWGAMIS 210
A ++ D + SL++ +++ +I GY K G D A E ++G + ++I
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 211 GYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC----AHMGALDTGVWVHRYLNRA 266
+ F L M L ++ P + +++S H AL+ +W +LN+
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE--LWFQ-FLNKG 500
Query: 267 RLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGA 322
+ R S +LL + G LD A R+ + R D V +N +ISG A
Sbjct: 501 -FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 323 LKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVD 382
EM K G+KPD+ T+ + E ++ D M P Y ++D
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC-KRNGMLPDVYTYSVMID 618
Query: 383 LLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
+ EE + S N T+ + + A C G+ +A
Sbjct: 619 GCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 113/278 (40%), Gaps = 43/278 (15%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYS-- 131
NT+I L+ M++ GL PDNYT Y++ C + + E I +
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT--YSILICGLFNMNKVEEAIQFWDDC 601
Query: 132 SKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLAR 191
+ G+L D++ ++S+MI G K + +
Sbjct: 602 KRNGMLPDVY-------------------------------TYSVMIDGCCKAERTEEGQ 630
Query: 192 LFFDETPEKD----KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
FFDE K+ ++ +I Y ++ L L M+ I P+ + + S++
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI---- 303
+ + ++ + + L ++ T+L+D Y K G + + L M +++
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITF 341
+ + MI G A G+ A +L +EM + GI PD IT+
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 149/384 (38%), Gaps = 48/384 (12%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKA-C----AALRDHS 122
P V + N +I +F+ G+LN+ + + M+ GLS + T +K C A +
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 123 LGEMIH-GYSSKLG------------LLFDI---FVG--------------NSLIAMYCV 152
L EM+ G++ G L+FD FVG +LI+ C
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 153 FGDMVAARKVFDEIPSLSAV----SWSLMISGYAKVGDVDLARLFFDETPEK----DKGI 204
G A +++ + + V + + ++ G + G +D A E + D+
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLN 264
+ +ISG E M + PD + ++ +M ++ +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI----VCWNAMISGLAMHGDGI 320
R + + + ++D K + + FD M +++ V +N +I G
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 321 GALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCL 380
AL+L +M+ GI P+ T+ ++ S E KLL + + +EP HY L
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA-KLLFEEMRMEGLEPNVFHYTAL 721
Query: 381 VDLLSRTGFFEEAMVIIRRITNSN 404
+D + G + ++R + + N
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKN 745
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 161/407 (39%), Gaps = 33/407 (8%)
Query: 45 AFCSHPHQGSLTYACKVFQRIQH----PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNG 100
AFC G + A K+F +++ P V NT+I + G + M+ G
Sbjct: 269 AFCKG---GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 325
Query: 101 LSPDNYTIPYALKACAALRDHSLGE--MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVA 158
+ P I Y++ R +G+ + +K G ++ V N+LI + G +
Sbjct: 326 MEPT--LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 159 ARKVFDEIP----SLSAVSWSLMISGYAKVGDVDLARLFFDETP----EKDKGIWGAMIS 210
A ++ D + SL++ +++ +I GY K G D A E ++G + ++I
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 211 GYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC----AHMGALDTGVWVHRYLNRA 266
+ F L M L ++ P + +++S H AL+ +W +LN+
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE--LWFQ-FLNKG 500
Query: 267 RLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGA 322
+ R S +LL + G LD A R+ + R D V +N +ISG A
Sbjct: 501 -FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 323 LKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVD 382
EM K G+KPD+ T+ + E ++ D M P Y ++D
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC-KRNGMLPDVYTYSVMID 618
Query: 383 LLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLA 429
+ EE + S N T+ + + A C G+ +A
Sbjct: 619 GCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 113/278 (40%), Gaps = 43/278 (15%)
Query: 74 NTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYS-- 131
NT+I L+ M++ GL PDNYT Y++ C + + E I +
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT--YSILICGLFNMNKVEEAIQFWDDC 601
Query: 132 SKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLAR 191
+ G+L D++ ++S+MI G K + +
Sbjct: 602 KRNGMLPDVY-------------------------------TYSVMIDGCCKAERTEEGQ 630
Query: 192 LFFDETPEKD----KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSAC 247
FFDE K+ ++ +I Y ++ L L M+ I P+ + + S++
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 248 AHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI---- 303
+ + ++ + + L ++ T+L+D Y K G + + L M +++
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITF 341
+ + MI G A G+ A +L +EM + GI PD IT+
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 149/384 (38%), Gaps = 48/384 (12%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKA-C----AALRDHS 122
P V + N +I +F+ G+LN+ + + M+ GLS + T +K C A +
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 123 LGEMIH-GYSSKLG------------LLFDI---FVG--------------NSLIAMYCV 152
L EM+ G++ G L+FD FVG +LI+ C
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 153 FGDMVAARKVFDEIPSLSAV----SWSLMISGYAKVGDVDLARLFFDETPEK----DKGI 204
G A +++ + + V + + ++ G + G +D A E + D+
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 205 WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLN 264
+ +ISG E M + PD + ++ +M ++ +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 265 RARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDRDI----VCWNAMISGLAMHGDGI 320
R + + + ++D K + + FD M +++ V +N +I G
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 321 GALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCL 380
AL+L +M+ GI P+ T+ ++ S E KLL + + +EP HY L
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA-KLLFEEMRMEGLEPNVFHYTAL 721
Query: 381 VDLLSRTGFFEEAMVIIRRITNSN 404
+D + G + ++R + + N
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKN 745
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 145/388 (37%), Gaps = 54/388 (13%)
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEM 126
P N ++ A G+ ++ +F M PD T +K CA + L
Sbjct: 233 RPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVF 292
Query: 127 IHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPS------------------ 168
+ G+ + +SL+A Y FGD+ A ++ +
Sbjct: 293 VLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLK 352
Query: 169 ---------LSAVSWSLMISGYA------KVGDVDLARLFFD-------ETP------EK 200
SGY+ + G VD+ + E P
Sbjct: 353 EKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAP 412
Query: 201 DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTD---IGPDESIFVSILSACAHMGALDTGV 257
D I+ ++ GY++N + + M+ D PDE + +++SA + G +D
Sbjct: 413 DSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRAR 472
Query: 258 WVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPD-----RDIVCWNAMISG 312
V + R +P + LL Y K +D A+ L M + D+V +N +I G
Sbjct: 473 QVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDG 532
Query: 313 LAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEP 372
+ D GAL F+EM GI P I++ + A + SG ++ D+M + ++
Sbjct: 533 CILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKV 592
Query: 373 KSEHYGCLVDLLSRTGFFEEAMVIIRRI 400
+ LV+ R G E+A ++ R+
Sbjct: 593 DLIAWNMLVEGYCRLGLIEDAQRVVSRM 620
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 6/243 (2%)
Query: 199 EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVW 258
+ D + A+I+G+ + N + + M+ D PD + ++ + G LD +
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 259 VHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR----DIVCWNAMISGLA 314
V L ++ T L++ G +D A +L D M R D+ +N +I G+
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 315 MHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKS 374
G A ++ +E G +PD I++ + A G EG KL+ KMFS +P
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS-EKCDPNV 333
Query: 375 EHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAE 434
Y L+ L R G EEAM ++ ++ + + ++ ++A C G+ +A E
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLL-KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 435 SLV 437
+++
Sbjct: 393 TMI 395
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 163/406 (40%), Gaps = 44/406 (10%)
Query: 45 AFCSHPHQGSLTYACKVFQRIQ----HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNG 100
+ CS +G L A KV ++ PTV +I+A ++ G ++ L + ML G
Sbjct: 202 SLCS---RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 101 LSPDNYTIPYALKA-CAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAA 159
L PD +T ++ C EM+ K G D+ N L+
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK-GCEPDVISYNILLR----------- 306
Query: 160 RKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFK 219
+L+ G + G+ + ++F E + + + +I+ ++ +
Sbjct: 307 ---------------ALLNQGKWEEGEKLMTKMF-SEKCDPNVVTYSILITTLCRDGKIE 350
Query: 220 EGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGV-WVHRYLNRARLPLSIRLSTSL 278
E + L +LM+ + PD + +++A G LD + ++ ++ LP + +T L
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 279 LDMYAKCGNLDLAKRLFDSMPD----RDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGI 334
+ K G D A +F + + + +N M S L GD I AL + EM GI
Sbjct: 411 ATL-CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Query: 335 KPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
PD+IT+ ++ + GM E +LL M S P Y ++ + E+A+
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSC-EFHPSVVTYNIVLLGFCKAHRIEDAI 528
Query: 395 VIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLAAESLVRLD 440
++ + + ET + + G A A LVR+D
Sbjct: 529 NVLESMVGNGCRPNET-TYTVLIEGIGFAGYRAEAMELANDLVRID 573
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 130/330 (39%), Gaps = 14/330 (4%)
Query: 83 NGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFV 142
+GN +LH+ M+R G +PD +K LR+ + K G D+F
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP-DVFA 160
Query: 143 GNSLIAMYCVFGDMVAARKVFDEIPSL----SAVSWSLMISGYAKVGDVDLA----RLFF 194
N+LI +C + A +V D + S V++++MI G +DLA
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 195 DETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALD 254
+ + + +I + E L L M + PD + +I+ G +D
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 255 TGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLD----LAKRLFDSMPDRDIVCWNAMI 310
+ R L + LL G + L ++F D ++V ++ +I
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 311 SGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNM 370
+ L G A+ L M++ G+ PD ++ + A G ++ L+ M S +
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 371 EPKSEHYGCLVDLLSRTGFFEEAMVIIRRI 400
P +Y ++ L + G ++A+ I ++
Sbjct: 401 -PDIVNYNTVLATLCKNGKADQALEIFGKL 429
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 149/379 (39%), Gaps = 51/379 (13%)
Query: 67 HPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKA-CAALRDHSLGE 125
+P V +C +IK F N+ + + V + + G PD + + C R
Sbjct: 121 NPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATR 179
Query: 126 MIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPS----LSAVSWSLMISGY 181
++ SK D N +I C G + A KV +++ S + ++++++I
Sbjct: 180 VLDRMRSK-DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEAT 238
Query: 182 AKVGDVDLARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDE 237
G VD A DE + D + +I G + + R ++L PD
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298
Query: 238 SIFVSILSACAHMGALDTGVWVHRYLNRAR-----LPLSIRLST---------------- 276
+ +L A + G + G + + + + SI ++T
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 277 --------------SLLDMYAKCGNLDLAKRLFDSMPDR----DIVCWNAMISGLAMHGD 318
L+ + + G LD+A ++M DIV +N +++ L +G
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 319 GIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYG 378
AL++F ++ ++G P+ ++ +F+A SG L ++ +M S ++P Y
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS-NGIDPDEITYN 477
Query: 379 CLVDLLSRTGFFEEAMVII 397
++ L R G +EA ++
Sbjct: 478 SMISCLCREGMVDEAFELL 496
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 130/309 (42%), Gaps = 12/309 (3%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
P V I NT+I N +LN L VF M + G+ D T + + + +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAV----SWSLMISGYAK 183
K + ++ +LI + G+++ AR ++ E+ S V +++ +I+G+
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 184 VGDVDLARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESI 239
G + A+ FD K D + +I+G+ ++ ++G+ LF M + D
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 240 FVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLD----LAKRLF 295
+ +++ G L+ V + + I LLD G ++ + + L
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 296 DSMPDRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMAS 355
S D DI+ +N +I GL A LF + + G+KPD I +I + + G+
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 356 EGLKLLDKM 364
E KL +M
Sbjct: 482 EADKLCRRM 490
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 172/439 (39%), Gaps = 49/439 (11%)
Query: 17 NMKQLKQAHAQVFTSGLDNNSFALSRVLAFCSHPHQ---------------GSLTYACKV 61
++K + H + G +N +LSR + SH H + + C++
Sbjct: 12 SVKGFVRRHYLLLERG-NNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEM 70
Query: 62 FQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDH 121
Q P++ ++ + ++++ M G+S D Y+ +
Sbjct: 71 LQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRL 130
Query: 122 SLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWSLMISGY 181
SL + G KLG I SL+ +C F E AVS + G+
Sbjct: 131 SLALALLGKMMKLGFRPSIVTLGSLLNGFC-------QGNRFQE-----AVSLVDSMDGF 178
Query: 182 AKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFV 241
V +V I+ +I+G +N L +F M+ I D +
Sbjct: 179 GFVPNV---------------VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYN 223
Query: 242 SILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR 301
+++S ++ G + R + + ++ ++ T+L+D + K GNL A+ L+ M R
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 302 DIV----CWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEG 357
+V +N++I+G +HG A +F M G PD +T+ + T S +G
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 358 LKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFL 417
+KL +M + + + Y L+ + G A + R+ + S + + + L
Sbjct: 344 MKLFCEM-TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC-GVSPDIVTYNILL 401
Query: 418 SACCNHGQAQLATLAAESL 436
CN+G+ + A + E L
Sbjct: 402 DCLCNNGKIEKALVMVEDL 420
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 147/350 (42%), Gaps = 46/350 (13%)
Query: 56 TYACKVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKAC 115
T+ C V QR + P V +I G + + ++ M+R+G+SPDN KAC
Sbjct: 136 TFFCMV-QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDN-------KAC 187
Query: 116 AALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLSAVSWS 175
AAL + + H + K+ L +++ V ++ +AR LS V ++
Sbjct: 188 AAL----VVGLCH--ARKVDLAYEM-----------VAEEIKSAR------VKLSTVVYN 224
Query: 176 LMISGYAKVGDVDLARLFFDETP----EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLT 231
+ISG+ K G ++ A E D + +++ Y NN K + M +
Sbjct: 225 ALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS 284
Query: 232 DIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLP---LSIRLSTSLLDMYAKCGNL 288
I D + +L + D + ++ + P + ++L++ + + N
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDK---CYNFMVKEMEPRGFCDVVSYSTLIETFCRASNT 341
Query: 289 DLAKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAV 344
A RLF+ M + ++V + ++I G+ A KL +M +LG+ PD I + +
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401
Query: 345 FTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEAM 394
SG + + + M + + P + Y L+ L R+G EA+
Sbjct: 402 LDHLCKSGNVDKAYGVFNDMIE-HEITPDAISYNSLISGLCRSGRVTEAI 450
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 102/487 (20%), Positives = 174/487 (35%), Gaps = 95/487 (19%)
Query: 43 VLAFCSHPHQGSLTYACKVFQRIQH-----PTVCICNTIIKAFLINGNLNRTLHVFTNML 97
V FC +G + A Q + + P NT++ G++ + + ML
Sbjct: 266 VHGFC---KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 98 RNGLSPDNYTIPYALKACAALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMV 157
+ G PD YT NS+I+ C G++
Sbjct: 323 QEGYDPDVYTY-----------------------------------NSVISGLCKLGEVK 347
Query: 158 AARKVFDEIP----SLSAVSWSLMISGYAKVGDV----DLARLFFDETPEKDKGIWGAMI 209
A +V D++ S + V+++ +IS K V +LAR+ + D + ++I
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 210 SGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLP 269
G + + LF M+ PDE + ++ + G LD + + + + +
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 270 LSIRLSTSLLDMYAKCGNLDLAKRLFDSMP----DRDIVCWNAMISGLAMHGDGIGALKL 325
S+ +L+D + K A+ +FD M R+ V +N +I GL A +L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 326 FSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLS 385
+M G KPD T+ ++ T G + ++ M S EP YG L+ L
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS-NGCEPDIVTYGTLISGLC 586
Query: 386 RTGFFE-----------------------------------EAMVIIRRITNSNNGSEET 410
+ G E EA+ + R + N +
Sbjct: 587 KAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDA 646
Query: 411 LAWRAFLSACCNHGQA--QLATLAAESLVRLDNP--SGLYVLISNLYAASGRHADVRRVR 466
+++R CN G + E L + P S LY+L L S V+ V
Sbjct: 647 VSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVN 706
Query: 467 DVMKNKR 473
VM+ R
Sbjct: 707 MVMQKAR 713
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 156/411 (37%), Gaps = 50/411 (12%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKAC-------AALR- 119
P V N +IKA L + + +M GL PD T ++ ALR
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 120 ------------DHSLGEMIHGY----------------SSKLGLLFDIFVGNSLIAMYC 151
+ S+ ++HG+ S++ G D + N+L+ C
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 152 VFGDMVAARKVFD----EIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKD----KG 203
G + A ++ D E +++ +ISG K+G+V A D+ +D
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 204 IWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTGVWVHRYL 263
+ +IS + N +E L R++ I PD F S++ + + +
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 264 NRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMP----DRDIVCWNAMISGLAMHGDG 319
L+D G LD A + M R ++ +N +I G
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 320 IGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGC 379
A ++F EME G+ + +T+ + S + +L+D+M + +P Y
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI-MEGQKPDKYTYNS 545
Query: 380 LVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLAT 430
L+ R G ++A I++ +T SN + + + +S C G+ ++A+
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMT-SNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 170/407 (41%), Gaps = 21/407 (5%)
Query: 80 FLINGNLNRTLHV-FTNMLRNGLSPDNYTIPYALKA-CAALRDHSLGEMIHGYSSKLGLL 137
L++GN + + + M G+ PD T +KA C A + M+ S GL+
Sbjct: 163 LLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS-YGLV 221
Query: 138 FDIFVGNSLIAMYCVFGDMVAARKVFDEIP----SLSAVSWSLMISGYAKVGDVDLARLF 193
D +++ Y GD+ A ++ +++ S S VS ++++ G+ K G V+ A F
Sbjct: 222 PDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNF 281
Query: 194 FDETPEKD-----KGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACA 248
E +D + + +++G + K + + +M PD + S++S
Sbjct: 282 IQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC 341
Query: 249 HMGALDTGVWV-HRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR----DI 303
+G + V V + + R P ++ +T L+ K ++ A L + + D+
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNT-LISTLCKENQVEEATELARVLTSKGILPDV 400
Query: 304 VCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDK 363
+N++I GL + + A++LF EM G +PD+ T+ + + G E L +L +
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 364 MFSVYNMEPKSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEETLAWRAFLSACCNH 423
M + Y L+D + EA I + + S ++ + + C
Sbjct: 461 M-ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM-EVHGVSRNSVTYNTLIDGLCKS 518
Query: 424 GQAQLATLAAESLVRLDNPSGLYVLISNLYAASGRHADVRRVRDVMK 470
+ + A + ++ Y ++L R D+++ D+++
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTY-NSLLTHFCRGGDIKKAADIVQ 564
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 131/312 (41%), Gaps = 49/312 (15%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIP-----YALKACAALRDHS 122
P V N ++ F+ G L ++ M+ G+SP+ T Y ++ + ++
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 123 LGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPS----LSAVSWSLMI 178
L M+ S DI SLI YC+ + KVF I +AV++S+++
Sbjct: 356 LDLMVRNKCSP-----DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 179 SGYAKVGDVDLARLFFDETPEKDKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDES 238
G+ + G + LA F E M+S V PD
Sbjct: 411 QGFCQSGKIKLAEELFQE-----------MVSHGVL--------------------PDVM 439
Query: 239 IFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSM 298
+ +L G L+ + + L ++++ L I + T++++ K G ++ A LF S+
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 299 PDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMA 354
P + +++ + MISGL G A L +ME+ G P+D T+ + A G
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 355 SEGLKLLDKMFS 366
+ KL+++M S
Sbjct: 560 TASAKLIEEMKS 571
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/397 (18%), Positives = 151/397 (38%), Gaps = 48/397 (12%)
Query: 60 KVFQRIQHPTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALR 119
KV + P NT+IK + G ++ + + M+ NG PD T +
Sbjct: 148 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 207
Query: 120 DHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL----SAVSWS 175
D SL + + + D+F +++I C G + AA +F E+ + S V+++
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 176 LMISGYAKVGDVDLARLFFDETPEKD---------------------------------K 202
++ G K G + L + ++ +
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 203 GI------WGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGALDTG 256
GI + ++ GY N E + LM PD F S++ + +D G
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 257 VWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR----DIVCWNAMISG 312
+ V R +++ L + + L+ + + G + LA+ LF M D++ + ++ G
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 313 LAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEP 372
L +G AL++F +++K + + + + G + L + ++P
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL-PCKGVKP 506
Query: 373 KSEHYGCLVDLLSRTGFFEEAMVIIRRITNSNNGSEE 409
Y ++ L + G EA +++R++ N +
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 114/288 (39%), Gaps = 11/288 (3%)
Query: 116 AALRDHSLGEMIHGYSSKLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSLS--AVS 173
+ LR G LGL D + N ++ +G+ + P +
Sbjct: 307 SVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHT 366
Query: 174 WSLMISGYAKVGDVDLARLFFDETP----EKDKGIWGAMISGYVQNNCFKEGLYLFRLMQ 229
++ M+ + DE + + + +I Y + N E + +F MQ
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 230 LTDIGPDESIFVSILSACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLD 289
PD + +++ A G LD + +++ + L + +++ K G+L
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 290 LAKRLFDSMPDR----DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVF 345
A +LF M D+ ++V +N M+ A + ALKL+ +M+ G +PD +T+ V
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 346 TACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEA 393
+ G E + +M N P YG LVDL + G E+A
Sbjct: 547 EVLGHCGYLEEAEAVFTEM-QQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 152/366 (41%), Gaps = 51/366 (13%)
Query: 52 QGSLTYACKVFQRIQH----PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPD--- 104
+G + A + ++++ P V I NTII A N+N L++FT M G+ P+
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 105 ---------NY---------------------TIPYALKACAALRDHSLGEMIHGYSS-- 132
NY + ++ A +++ L E Y
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 133 KLGLLFDIFVGNSLIAMYCVFGDMVAARKVFDEIPSL----SAVSWSLMISGYAKVGDVD 188
K + DIF +SLI +C+ + A+ +F+ + S + V+++ +I G+ K VD
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 189 LARLFFDETPEK----DKGIWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSIL 244
F E ++ + + +I G+ Q +F+ M + PD + +L
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 245 SACAHMGALDTGVWVHRYLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR--- 301
+ G ++T + V YL R+++ I +++ K G ++ LF S+ +
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 302 -DIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKL 360
++V + M+SG G A LF EM++ G PD T+ + A G + +L
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 361 LDKMFS 366
+ +M S
Sbjct: 594 IREMRS 599
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 166/435 (38%), Gaps = 65/435 (14%)
Query: 68 PTVCICNTIIKAFLINGNLNRTLHVFTNMLRNGLSPDNYTIPYALKACAALRDHSLGEMI 127
P++ + ++ A + + + M G+S + YT + SL +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 128 HGYSSKLGLLFDIFVGNSLIAMYC----------VFGDMV-------------------- 157
KLG DI NSL+ +C + G MV
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 158 -----AARKVFDEI------PSLSAVSWSLMISGYAKVGDVDLARLFFD--ETPEKDKG- 203
A + D + P L V++ ++++G K GD+DLA E + + G
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDL--VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 204 -IWGAMISGYVQNNCFKEGLYLFRLMQLTDIGPDESIFVSILSACAHMGAL-DTGVWVHR 261
I+ +I + L LF M I P+ + S++ + G D +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 262 YLNRARLPLSIRLSTSLLDMYAKCGNLDLAKRLFDSMPDR----DIVCWNAMISGLAMHG 317
+ R P + S +L+D + K G L A++L+D M R DI ++++I+G MH
Sbjct: 317 MIERKINPNVVTFS-ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 318 DGIGALKLFSEMEKLGIKPDDITFIAVFTACSYSGMASEGLKLLDKMFSVYNMEPKSEHY 377
A +F M P+ +T+ + + EG++L +M S + + Y
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM-SQRGLVGNTVTY 434
Query: 378 GCLVDLLSRTGFFE-----EAMVIIRRITNSNNGSEETLAWRAFLSACCNHGQAQLATLA 432
L+ GFF+ A ++ +++ S+ + + + L CN+G+ + A +
Sbjct: 435 TTLIH-----GFFQARECDNAQIVFKQMV-SDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 433 AESLVRLDNPSGLYV 447
E L R +Y
Sbjct: 489 FEYLQRSKMEPDIYT 503
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 114/287 (39%), Gaps = 54/287 (18%)
Query: 152 VFGDMVAARKVFDEIPSLSAVSWSLMISGYAKVGDVDLARLFFDETPEKDKGIWGAMISG 211
+FGDMV +R P S V +S ++S AK+ DL ++ ++ GI + +
Sbjct: 68 LFGDMVKSR------PFPSIVEFSKLLSAIAKMNKFDLVISLGEQM--QNLGISHNLYTY 119
Query: 212 YVQNNCF----KEGLYLFRLMQLTDIG--PDESIFVSILSACAHMGALDTGV-WVHRYLN 264
+ NCF + L L L ++ +G PD S+L+ H + V V + +
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 265 RARLPLSIRLSTSLLDMY----------------------------------AKCGNLDL 290
P S +T + ++ K G++DL
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 291 AKRLFDSMP----DRDIVCWNAMISGLAMHGDGIGALKLFSEMEKLGIKPDDITFIAVFT 346
A L M + +V +N +I L + + AL LF+EM+ GI+P+ +T+ ++
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 347 ACSYSGMASEGLKLLDKMFSVYNMEPKSEHYGCLVDLLSRTGFFEEA 393
G S+ +LL M + P + L+D + G EA
Sbjct: 300 CLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEA 345