Miyakogusa Predicted Gene

Lj2g3v1254030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1254030.1 tr|Q9FZE3|Q9FZE3_ARATH C2H2-like zinc finger
protein OS=Arabidopsis thaliana GN=T1K7.4 PE=2
SV=1,32.61,3e-18,seg,NULL; ZINC_FINGER_C2H2_2,Zinc finger, C2H2;
ZINC_FINGER_C2H2_1,Zinc finger, C2H2; zinc finger,Zi,CUFF.36601.1
         (518 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26610.1 | Symbols:  | C2H2-like zinc finger protein | chr1:9...   259   3e-69
AT1G26590.1 | Symbols:  | C2H2-like zinc finger protein | chr1:9...    70   4e-12
AT1G02030.1 | Symbols:  | C2H2-like zinc finger protein | chr1:3...    64   2e-10
AT3G60580.1 | Symbols:  | C2H2-like zinc finger protein | chr3:2...    62   8e-10
AT2G45120.1 | Symbols:  | C2H2-like zinc finger protein | chr2:1...    55   1e-07
AT1G27730.1 | Symbols: STZ, ZAT10 | salt tolerance zinc finger |...    49   9e-06

>AT1G26610.1 | Symbols:  | C2H2-like zinc finger protein |
           chr1:9193735-9195102 FORWARD LENGTH=455
          Length = 455

 Score =  259 bits (662), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 200/535 (37%), Positives = 258/535 (48%), Gaps = 100/535 (18%)

Query: 1   MEERKFVCKYCSKRFPCGKSLGGHIRTHMMSEHSAQANEASAERRSNAAMLKLDAAERKR 60
            +ERKFVCK+CSKRFPCGKSLGGHIRTHM +E+SA ++E  A++     M+  +  +   
Sbjct: 4   FKERKFVCKFCSKRFPCGKSLGGHIRTHM-NENSADSDEDEADK---LKMIDENGGQSS- 58

Query: 61  KRESXXXXXXXXXXXXXXXXXXXXXXXNLMYGLRENPKKTTRFV-HSNATSSQME----- 114
                                         YGLRENPKK  RFV H    + + +     
Sbjct: 59  ------------------------------YGLRENPKKNKRFVDHRQIMALKQQQQQQQ 88

Query: 115 ----KFCKECGKGFPSLKALCGHMACHSEKDRGTNLSEKQKLVMDTQSDTETSGPTHPRR 170
               + C+ECGKGF S KALCGHMACHSE+         +K+VMD+QSDTE S     RR
Sbjct: 89  LQELRRCRECGKGFVSSKALCGHMACHSER---------EKIVMDSQSDTEASSSPIRRR 139

Query: 171 SKRMRXXXXXXXXXXXXLTNHHPXXXXXXXXXXXXXXXXXXXXXARCLMMLSKDSSYKGR 230
           SKR+             +  +                       AR LMMLS+DSS+K  
Sbjct: 140 SKRV--VVKPHHKAAFVVGGNGIMNQSISASSDASEIEPEQEEMARSLMMLSRDSSFKKG 197

Query: 231 FALVTDSSDNNSVVLEAKSPS----VTFNFGKNFVSNAYELVEQKKKVHKDTKLKSSAEI 286
              + +SSDNNSV+LE KS S      FN     V N  EL ++ K V  D +++S  E 
Sbjct: 198 HNSLAESSDNNSVILETKSSSGEQVKMFN-----VKNVEELCKKNKLV-VDNQMRSGEEN 251

Query: 287 G---YDSDNSDSGYFRYGPKKVDSDEESSDGFFRNEVKSSKVGYLSGFDGYDVESRKMMM 343
           G   YDSDNSDSGYFR GPKK+DSD  S DGFFRN+   + +G  SGF+    +  + M 
Sbjct: 252 GDVHYDSDNSDSGYFRNGPKKLDSDV-SVDGFFRNK---TIMGSGSGFNSSPTKQDRDMN 307

Query: 344 LSRGSKKLVLEDLDNEHSKFGSRKRLTYDSVGQKTEALDHXXXXXXXXNHGLFTNERDNN 403
             R   K   ++  +       R    YD    K     H            FT      
Sbjct: 308 RFR---KEWYKEGGSGSGSGSGRSSTKYDLRKSKRGFPSHGRKKIKYE----FT------ 354

Query: 404 GSGSEDSAYESDENSTDSDSYPATKPHKNLNVXXXXXXXXXXXXXXXXXXEHECPICNKI 463
                +S Y+S E+S ++DS   T  ++ + +                   HECPIC ++
Sbjct: 355 -----ESVYDSGEHSLETDSCADT--NRTIKIHSKSPMVKKANGAKKKSKGHECPICFRV 407

Query: 464 FRSGQALGGHKRSHFVGGSEENTLVIRPGXXXXXXXXXXXXXCLIDLNLPAPVDE 518
           F+SGQALGGHKRSHF+G  E  TLVI+                LIDLNLPAP+DE
Sbjct: 408 FKSGQALGGHKRSHFIGNQEHRTLVIQ-------HQVAHEMHTLIDLNLPAPIDE 455


>AT1G26590.1 | Symbols:  | C2H2-like zinc finger protein |
           chr1:9189624-9190709 FORWARD LENGTH=361
          Length = 361

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 45/209 (21%)

Query: 112 QMEKFCKECGKGFPSLKALCGHMACHSEKDRGTNLSEKQKLVMD--TQSDTETSGPTHP- 168
           Q +  C+ECG+ F SLKAL GHMACH          E +K++MD  +QSDTE+   + P 
Sbjct: 61  QQQVGCRECGRVFVSLKALRGHMACH---------GEVKKMLMDDNSQSDTESETSSAPM 111

Query: 169 -RRSKRMRXXXXXXXXXXXXLTNHHPXXXXXXXXXXXXXXXXXXXXXARCLMML-SKDSS 226
            +RSKR+             +   +                      A  LMML S  SS
Sbjct: 112 RKRSKRV------------VMKQSNSESLSNGSSSFGSEIDQERRDGAYNLMMLSSDSSS 159

Query: 227 YKGRFALVT----DSSDNNSVVLEAKSPSVTFNFGKNFVSNAYELVEQKKKVHKDTKLKS 282
           +K R  +V     +SSDNNS ++E KS S           + ++++  K  V  D + +S
Sbjct: 160 FKKRRNMVMNSLGESSDNNSAIVENKSSS----------GDEFKIMNVKNAV--DDQWRS 207

Query: 283 SAEIGY---DSDNSDSGYFRYGPKKVDSD 308
           + + G    DSD SDS YF  GP K +SD
Sbjct: 208 ADDDGVSLCDSDGSDSDYFMNGPSKSESD 236



 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/26 (73%), Positives = 23/26 (88%)

Query: 455 HECPICNKIFRSGQALGGHKRSHFVG 480
           HECPIC ++F+SGQALGGHKRSH + 
Sbjct: 315 HECPICFRMFKSGQALGGHKRSHSIA 340


>AT1G02030.1 | Symbols:  | C2H2-like zinc finger protein |
           chr1:355385-356188 REVERSE LENGTH=267
          Length = 267

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 36/64 (56%), Gaps = 13/64 (20%)

Query: 455 HECPICNKIFRSGQALGGHKRSHFVGGSEENTLVIRPGXXXXXXXXXXXXXCLIDLNLPA 514
           HECPIC K+F SGQALGGHKRSH    S  N    R G              LIDLNLPA
Sbjct: 209 HECPICAKVFTSGQALGGHKRSH---ASANNEFTRRSGIIIS----------LIDLNLPA 255

Query: 515 PVDE 518
           P +E
Sbjct: 256 PSEE 259


>AT3G60580.1 | Symbols:  | C2H2-like zinc finger protein |
           chr3:22394007-22394873 FORWARD LENGTH=288
          Length = 288

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 35/64 (54%), Gaps = 7/64 (10%)

Query: 455 HECPICNKIFRSGQALGGHKRSHFVGGSEENTLVIRPGXXXXXXXXXXXXXCLIDLNLPA 514
           HECPIC ++F SGQALGGHKRSH VG    N                     +IDLNLPA
Sbjct: 224 HECPICLRVFASGQALGGHKRSHGVGNLSVN-------QQRRVHRNESVKQRMIDLNLPA 276

Query: 515 PVDE 518
           P +E
Sbjct: 277 PTEE 280


>AT2G45120.1 | Symbols:  | C2H2-like zinc finger protein |
           chr2:18603680-18604624 FORWARD LENGTH=314
          Length = 314

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 455 HECPICNKIFRSGQALGGHKRSHFVGGSEENTLVIRPGXXXXXXXXXXXXXCLIDLNLPA 514
           HECPIC ++F SGQALGGHKRSH         L +                 +IDLNLPA
Sbjct: 243 HECPICFRVFTSGQALGGHKRSHGSNIGAGRGLSVSQIVQIEEEVSVKQR--MIDLNLPA 300

Query: 515 PVDE 518
           P +E
Sbjct: 301 PNEE 304


>AT1G27730.1 | Symbols: STZ, ZAT10 | salt tolerance zinc finger |
           chr1:9648302-9648985 REVERSE LENGTH=227
          Length = 227

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 455 HECPICNKIFRSGQALGGHKRSHFVGGSEENTLVIRPGXXXXXXXXXXXXXCLIDLNLPA 514
           H C ICNK F SGQALGGHKR H+ G +  NT  +                   DLN+P 
Sbjct: 136 HVCTICNKSFPSGQALGGHKRCHYEGNNNINTSSVSNSEGAGSTSHVSSSHRGFDLNIP- 194

Query: 515 PVDE 518
           P+ E
Sbjct: 195 PIPE 198