Miyakogusa Predicted Gene

Lj2g3v1253990.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1253990.1 Non Chatacterized Hit- tr|I3S5R3|I3S5R3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.9,0,COBW
DOMAIN CONTAINING (VERTEBRATES),NULL; COBW-RELATED,NULL; Cobalamin
synthesis protein cobW
C-ter,NODE_81045_length_1593_cov_18.831764.path2.1
         (364 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26520.1 | Symbols:  | Cobalamin biosynthesis CobW-like prote...   511   e-145
AT1G15730.1 | Symbols:  | Cobalamin biosynthesis CobW-like prote...   244   9e-65
AT1G80480.1 | Symbols: PTAC17 | plastid transcriptionally active...   238   4e-63

>AT1G26520.1 | Symbols:  | Cobalamin biosynthesis CobW-like protein
           | chr1:9163448-9165594 REVERSE LENGTH=374
          Length = 374

 Score =  511 bits (1317), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 254/363 (69%), Positives = 292/363 (80%), Gaps = 8/363 (2%)

Query: 4   DEDEEAPLAVQIQ-----GLDESVSQQSSVGVTLITGYLGAGKSTLVNHILNSQHGKRIA 58
           D+DEE P+AVQI      G   S S   SVGV++ITGYLGAGKSTLVN+ILN +HGKRIA
Sbjct: 13  DDDEEPPMAVQIHPDVSVGKVHSSSDTVSVGVSVITGYLGAGKSTLVNYILNGKHGKRIA 72

Query: 59  VILNEFGEEIGVERAMINEGDGGAMVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 118
           VILNEFGEEIGVERAMINEG+ GA+VEEWVELANGC+CCTVKHSLVQALEQLVQRK+RLD
Sbjct: 73  VILNEFGEEIGVERAMINEGEEGAIVEEWVELANGCVCCTVKHSLVQALEQLVQRKDRLD 132

Query: 119 HILLETTGLANPAPLASVLWLDEQLESDVKLDSIVTVVDAKNVRLQIDQHRRSSSYPEAY 178
           HILLETTGLANPAPLAS+LWLD+QLES+VKLD IVTVVDAKN+R Q+++ R SSS+PEA+
Sbjct: 133 HILLETTGLANPAPLASILWLDDQLESEVKLDCIVTVVDAKNLRFQLNERRDSSSFPEAF 192

Query: 179 FQIAFADIIILNKVDLVSGEGSGALKELEEEIHNINSLVEIIHSVKCQVDLSKILNRHAY 238
            QIAFAD II+NKVDL+S E S    ELE+EIH+INSL  +I SV+CQVDLS ILN  AY
Sbjct: 193 NQIAFADTIIMNKVDLISQEES---DELEKEIHSINSLANVIRSVRCQVDLSNILNCQAY 249

Query: 239 DTARAPHXXXXXXXXXXXXXXXXHDSGVRTICISEQKTIDIDKTRIWLEEILWEKKYDMD 298
           D+                     HDSGVRT+CISE + I++DK R+WLEEILW+KK +MD
Sbjct: 250 DSTHVSRLESLLEANKSLTTTDLHDSGVRTLCISEPQPINLDKVRLWLEEILWDKKSEMD 309

Query: 299 VYRCKGVLSVQNSDQLHTLQAVRELYEIVPARKWEREENRMNKIVFIGHNLKEDVLIHSF 358
           VYRCK VLS+QNSDQ+H LQAVR++YEIVPARKW  EENR NKIVFIGH L E+VL    
Sbjct: 310 VYRCKAVLSIQNSDQMHILQAVRDIYEIVPARKWSEEENRTNKIVFIGHKLDEEVLRSGL 369

Query: 359 RAC 361
           R C
Sbjct: 370 RDC 372


>AT1G15730.1 | Symbols:  | Cobalamin biosynthesis CobW-like protein
           | chr1:5407535-5409937 REVERSE LENGTH=448
          Length = 448

 Score =  244 bits (622), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 140/364 (38%), Positives = 207/364 (56%), Gaps = 37/364 (10%)

Query: 28  VGVTLITGYLGAGKSTLVNHILNSQHGKRIAVILNEFGEEIGVERAMINEGDGGAMVEEW 87
           +  T+ITG+LG+GK+TL+NHIL   HGKRIAVI NEFGE + ++ +++     GA  E+ 
Sbjct: 92  IPATIITGFLGSGKTTLLNHILTGDHGKRIAVIENEFGE-VDIDGSLVAAQTAGA--EDI 148

Query: 88  VELANGCICCTVKHSLVQALEQLVQ-RKERLDHILLETTGLANPAPLASVLWLDEQLESD 146
           + L NGC+CCTV+  LV+ + ++VQ +K R DHI++ETTGLANPAP+    + ++++ +D
Sbjct: 149 MMLNNGCLCCTVRGDLVRMISEMVQTKKGRFDHIVIETTGLANPAPIIQTFYAEDEIFND 208

Query: 147 VKLDSIVTVVDAKNVRLQIDQHRRSSSYPEAYFQIAFADIIILNKVDLVSGEGSGALKEL 206
           VKLD +VT+VDAK+ RL +D+ +      EA  QIA+AD II+NK DLV   G   L  +
Sbjct: 209 VKLDGVVTLVDAKHARLHLDEVKPEGYVNEAVEQIAYADRIIVNKTDLV---GEPELASV 265

Query: 207 EEEIHNINSLVEIIHSVKCQVDLSKILNRHAYDTAR------------------------ 242
            + I  INS+  +  +   +VDL  +L    +D  R                        
Sbjct: 266 MQRIKTINSMAHMKRTKYGKVDLDYVLGIGGFDLERIESSVNEEEKEDREGHDDHHHGHD 325

Query: 243 ----APHXXXXXXXXXXXXXXXXHDSGVRTICISEQKTIDIDKTRIWLEEILWEKKYDMD 298
                                  HD GV ++ I  +  +D++K  +WL  +L+++    D
Sbjct: 326 CHDHHNEHEHEHEHEHHHSHDHTHDPGVGSVSIVCEGDLDLEKANMWLGALLYQRSE--D 383

Query: 299 VYRCKGVLSVQNSDQLHTLQAVRELYEIVPARKWEREENRMNKIVFIGHNLKEDVLIHSF 358
           +YR KG+LSVQ+ D+    Q V E++E  P R W ++E R NKIVFIG NL  + L   F
Sbjct: 384 IYRMKGILSVQDMDERFVFQGVHEIFEGSPDRLWRKDETRTNKIVFIGKNLNREELEMGF 443

Query: 359 RACV 362
           RAC+
Sbjct: 444 RACL 447


>AT1G80480.1 | Symbols: PTAC17 | plastid transcriptionally active 17
           | chr1:30258272-30260570 REVERSE LENGTH=444
          Length = 444

 Score =  238 bits (607), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 140/369 (37%), Positives = 208/369 (56%), Gaps = 36/369 (9%)

Query: 22  VSQQSSVGVTLITGYLGAGKSTLVNHILNSQHGKRIAVILNEFGEEIGVERAMINEGDGG 81
           +   + +  T+ITG+LG+GK+TL+NHIL   HGKRIAVI NEFGE + ++ +++     G
Sbjct: 83  IPPDNRIPATIITGFLGSGKTTLLNHILTRDHGKRIAVIENEFGE-VDIDGSLVASKSIG 141

Query: 82  AMVEEWVELANGCICCTVKHSLVQALEQLVQ-RKERLDHILLETTGLANPAPLASVLWLD 140
           A  E+ V L NGC+CCTV+  LV+ + +LV  +K + DHI++ETTGLANPAP+    + +
Sbjct: 142 A--EDIVMLNNGCLCCTVRGDLVRMIGELVNTKKGKFDHIVIETTGLANPAPIIQTFYAE 199

Query: 141 EQLESDVKLDSIVTVVDAKNVRLQIDQHRRSSSYPEAYFQIAFADIIILNKVDLVSGEGS 200
           E++ +DVKLD +VT+VDAK+ RL +D+ +      EA  QIA+AD II+NK DLV   G 
Sbjct: 200 EEIFNDVKLDGVVTLVDAKHARLHLDEVKPEGVVNEAVEQIAYADRIIVNKTDLV---GE 256

Query: 201 GALKELEEEIHNINSLVEIIHSVKCQVDLSKILNRHAYDTAR------------------ 242
             L  + + I  INS+ ++  +    VDL  +L    +D  R                  
Sbjct: 257 AELGSVVQRIKTINSMAQMTRTKYGNVDLDYVLGIGGFDLERIESSVNEDDKGDHHDHDH 316

Query: 243 ---------APHXXXXXXXXXXXXXXXXHDSGVRTICISEQKTIDIDKTRIWLEEILWEK 293
                      H                HD GV ++ I  + ++D++K  +WL  +L E+
Sbjct: 317 DHHHDHNHDHDHHHHDGHDHHHHSHDHTHDPGVSSVSIVCEGSLDLEKANMWLGTLLMER 376

Query: 294 KYDMDVYRCKGVLSVQNSDQLHTLQAVRELYEIVPARKWEREENRMNKIVFIGHNLKEDV 353
               D+YR KG+LSV   ++    Q V ++++  P R W REE R+NKIVFIG NL  + 
Sbjct: 377 SE--DIYRMKGLLSVHTMEERFVFQGVHDIFQGSPDRLWGREEERVNKIVFIGKNLNREE 434

Query: 354 LIHSFRACV 362
           L   F+AC+
Sbjct: 435 LEKGFKACL 443