Miyakogusa Predicted Gene
- Lj2g3v1253870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1253870.1 Non Chatacterized Hit- tr|D8RLC5|D8RLC5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,22.65,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR_2,Pentatricopeptide repeat; PPR_1,Pentatricopep,CUFF.36596.1
(391 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 505 e-143
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 4e-51
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 2e-50
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 124 1e-28
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 112 6e-25
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 1e-24
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 2e-23
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 100 1e-21
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 4e-21
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 7e-21
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 98 9e-21
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 7e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 95 1e-19
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 94 2e-19
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 94 2e-19
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 2e-18
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 3e-18
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 8e-18
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 1e-17
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 4e-17
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 86 4e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 8e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 83 3e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 1e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 76 5e-14
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 70 3e-12
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 9e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 9e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 68 1e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 5e-11
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 65 6e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 65 8e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 64 2e-10
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 64 2e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 9e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 59 5e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 59 8e-09
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 58 1e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 55 1e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 54 1e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 54 2e-07
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 52 9e-07
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 51 1e-06
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 51 1e-06
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 8e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 505 bits (1301), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/373 (64%), Positives = 297/373 (79%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGY 60
ML ++G SRN+DLFWEL +I +R D+TF I L+TL ARELKKCV FHLMN GY
Sbjct: 118 MLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVLKTLASARELKKCVNYFHLMNGFGY 177
Query: 61 GYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKI 120
YN+ET+N+ V+ +C KLVEEAK+V +KLKE++KPD + Y+ +I+GFCD GDLIEA+K+
Sbjct: 178 LYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKL 237
Query: 121 WNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMC 180
WNLM DEGF+ D+EA +K+METL K NQ EA K+F M KR +L YR++I W+C
Sbjct: 238 WNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLC 297
Query: 181 NKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHG 240
G + A+KVF+EMRERG+ +DNLT S++YGLL K RV EAY +V+ + DIS+YHG
Sbjct: 298 KNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVENPDISIYHG 357
Query: 241 LIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFV 300
LIKGL+K++RA EAT+VFR+MI+RGCEP MHTY+MLLQGHLGRRGRKG DPLVNFDTIFV
Sbjct: 358 LIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHLGRRGRKGPDPLVNFDTIFV 417
Query: 301 GGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKKLREVGLV 360
GG++K GK E KY+ER + RGLEVPRFDY+KFLHY+SNEEGV+MFEEM KKLREV L
Sbjct: 418 GGMIKAGKRLETTKYIERTLKRGLEVPRFDYSKFLHYYSNEEGVVMFEEMAKKLREVSLF 477
Query: 361 DLADILERYGQKM 373
DLADI +RYG+KM
Sbjct: 478 DLADIFQRYGEKM 490
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 210/396 (53%), Gaps = 17/396 (4%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGY 60
M+ ++ K+R + +L ++ + T TF IA++ A+E KK V +F LM +
Sbjct: 201 MMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKF 260
Query: 61 GYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKI 120
+ET+N ++D++ KL +EA+ + KLKE P+ + Y L+ G+C +LIEA++I
Sbjct: 261 KIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARI 320
Query: 121 WNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMC 180
WN M D+G +PD+ A M+E L + + +A+KLF M+ K + +Y ++I+ C
Sbjct: 321 WNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP-NVRSYTIMIRDFC 379
Query: 181 NKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDIS 236
+ M A + F++M + G+Q D ++ G + ++ Y+++ + D
Sbjct: 380 KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGK 439
Query: 237 VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG----------- 285
Y+ LIK + + AT+++ +MI+ EP++HT+ M+++ + R
Sbjct: 440 TYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEM 499
Query: 286 -RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGV 344
+KG P N T+ + GL+ GK+RE +Y+E ++++G++ P DYNKF F
Sbjct: 500 IKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP 559
Query: 345 LMFEEMGKKLREVGLVDLADILERYGQKMATRDRRR 380
+FEE+ ++ + G A+I R+ Q R ++R
Sbjct: 560 EIFEELAQRAKFSGKFAAAEIFARWAQMTRRRFKQR 595
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 208/396 (52%), Gaps = 17/396 (4%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGY 60
M+ ++ K+R + +L ++ + T TF IA++ A+E KK V +F LM +
Sbjct: 200 MMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKF 259
Query: 61 GYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKI 120
+ET+N ++D++ KL +EA+ + KLKE P+ + Y L+ G+C +LIEA++I
Sbjct: 260 KIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARI 319
Query: 121 WNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMC 180
WN M D G +PD+ A M+E L + + +A+KLF M+ K + +Y ++I+ C
Sbjct: 320 WNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP-NVRSYTIMIRDFC 378
Query: 181 NKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDIS 236
+ M A + F++M + G+Q D ++ G + ++ Y+++ + D
Sbjct: 379 KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGK 438
Query: 237 VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG----------- 285
Y+ LIK + + T+++ +MI+ EP++HT+ M+++ + R
Sbjct: 439 TYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEM 498
Query: 286 -RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGV 344
+KG P N T+ + GL+ GK+RE +Y+E ++++G++ P DYNKF F
Sbjct: 499 IKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP 558
Query: 345 LMFEEMGKKLREVGLVDLADILERYGQKMATRDRRR 380
+FEE+ ++ + G A+I R+ Q R ++R
Sbjct: 559 EIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 594
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 208/396 (52%), Gaps = 17/396 (4%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGY 60
M+ ++ K+R + +L ++ + T TF IA++ A+E KK V +F LM +
Sbjct: 201 MMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKF 260
Query: 61 GYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKI 120
+ET+N ++D++ KL +EA+ + KLKE P+ + Y L+ G+C +LIEA++I
Sbjct: 261 KIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARI 320
Query: 121 WNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMC 180
WN M D G +PD+ A M+E L + + +A+KLF M+ K + +Y ++I+ C
Sbjct: 321 WNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP-NVRSYTIMIRDFC 379
Query: 181 NKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDIS 236
+ M A + F++M + G+Q D ++ G + ++ Y+++ + D
Sbjct: 380 KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGK 439
Query: 237 VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG----------- 285
Y+ LIK + + T+++ +MI+ EP++HT+ M+++ + R
Sbjct: 440 TYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEM 499
Query: 286 -RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGV 344
+KG P N T+ + GL+ GK+RE +Y+E ++++G++ P DYNKF F
Sbjct: 500 IKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP 559
Query: 345 LMFEEMGKKLREVGLVDLADILERYGQKMATRDRRR 380
+FEE+ ++ + G A+I R+ Q R ++R
Sbjct: 560 EIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 595
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 160/350 (45%), Gaps = 30/350 (8%)
Query: 26 FATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKY 85
F TF + L A +K +E+ +M GY ++ T N V+ +C V+EA
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 86 VVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLF 144
V+ ++ P+ V Y LI C + + EA+++ ++ +G PDV +++ L
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 145 KVNQGGEALKLFETMRLK--RMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQI 202
A++LFE MR K DE TY ++I +C+KG + +A + ++M G
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEF---TYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 203 DNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDIS----VYHGLIKGLLKLRRAGEATQVF 258
+T +++ G ++ REA +I D + V +S Y+ LI GL K RR +A Q+
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 259 REMIKRGCEPTMHTYIMLLQGHLGRRG-------------RKGTDP-LVNFDTIFVGGLV 304
+MI G +P +TY LL H R G G +P +V + T+ + GL
Sbjct: 529 DQMIMEGQKPDKYTYNSLLT-HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL-ISGLC 586
Query: 305 KVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYF----SNEEGVLMFEEM 350
K G+ K + + +G+ + YN + E + +F EM
Sbjct: 587 KAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 129/301 (42%), Gaps = 43/301 (14%)
Query: 42 ARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVC 100
A + ++ E+F M +G N T N ++D +C + VE+A ++ ++ E KPD
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 101 YKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR 160
Y L+ FC GD+ +A+ I M G EPD+ ++ L K + A KL +++
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 161 LKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRV 220
+K ++ L Y VI+ + K ++A +F EM E+ +
Sbjct: 603 MKGIN-LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAV-------------- 647
Query: 221 REAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
+Y+I V+ GL G +R EA E++++G P + ML +G
Sbjct: 648 --SYRI----------VFRGLCNGGGPIR---EAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Query: 281 LGRRGRKGTDPLVNF----------DTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFD 330
L + LVN + V GL+K+ K ++ + + V++ PR
Sbjct: 693 LTLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDS--RQPRRT 750
Query: 331 Y 331
Y
Sbjct: 751 Y 751
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 117/287 (40%), Gaps = 39/287 (13%)
Query: 87 VLKLKEW------VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMM 140
+L + +W +KPD Y ++ D L M+ G +PDV ++
Sbjct: 137 ILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLI 196
Query: 141 ETLFKVNQGGEALKLFETMRLKRM--DELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRER 198
+ L + +Q A+ + E M + DE T+ V++ +G + A ++ E+M E
Sbjct: 197 KALCRAHQLRPAILMLEDMPSYGLVPDE---KTFTTVMQGYIEEGDLDGALRIREQMVEF 253
Query: 199 GIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG-----VMDISVYHGLIKGLLKLRRAGE 253
G N+++ +V+G + RV +A + + D ++ L+ GL K
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313
Query: 254 ATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYI 313
A ++ M++ G +P ++TY + GL K+G+ +E +
Sbjct: 314 AIEIMDVMLQEGYDPDVYTY-----------------------NSVISGLCKLGEVKEAV 350
Query: 314 KYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKKLREVGLV 360
+ +++++ R YN + E V E+ + L G++
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 173/381 (45%), Gaps = 26/381 (6%)
Query: 11 IDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
+DLF ++ D F T RT+ + +++L G+ + + + M G N+ T +
Sbjct: 308 MDLFVKMKDD---ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 71 VDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
+D++C E+A+ ++ + L++ + P+ + Y LI G+C +G + +A + LM
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQ 189
P+ ++++ K N +A+ + M L+R + TY +I C G A
Sbjct: 425 SPNTRTYNELIKGYCKSNVH-KAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 190 KVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GV-MDISVYHGLIKGL 245
++ M +RG+ D T S++ L RV EA + D + GV ++ +Y LI G
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 246 LKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLG------------RRGRKGTDPLV 293
K + EA + +M+ + C P T+ L+ G + + G P V
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 294 NFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKK 353
+ DTI + L+K G +++++ G + Y F+ + E +L E+M K
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 354 LREVG----LVDLADILERYG 370
+RE G L + +++ YG
Sbjct: 663 MRENGVSPDLFTYSSLIKGYG 683
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 130/309 (42%), Gaps = 43/309 (13%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
++D +S N D + LLS + R D+ T+ + +L ++ +++ ++F + G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
N+ ++D C V+EA ++ K L + P+ + + LI G C G L EA+
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
+ M G +P V ++ L K A F+ M L + TY I+
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM-LSSGTKPDAHTYTTFIQT 646
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVY 238
C +G + A+ + +MRE G+ D T Y
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPDLFT-------------------------------Y 675
Query: 239 HGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRR--GRKGTDP----- 291
LIKG L + A V + M GCEP+ HT++ L++ L + +KG++P
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735
Query: 292 --LVNFDTI 298
++ FDT+
Sbjct: 736 SNMMEFDTV 744
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 164/362 (45%), Gaps = 44/362 (12%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T + +L G E+K +V+ M + N+ T NK+V+ C VEEA V K+
Sbjct: 188 TLLNSLARFGLVDEMK---QVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 91 KEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
E + PD Y LI G+C + DL A K++N M +G + A ++ L +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 150 GEALKLFETMRLKRMDEL--GLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTL 207
EA+ LF M + DE + TY ++IK +C S+A + +EM E GI+ + T
Sbjct: 305 DEAMDLFVKM---KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 208 GSVVYGLLAKHRVREAYQIVDRI---GVM-DISVYHGLIKG---------------LLKL 248
++ L ++ + +A +++ ++ G+M ++ Y+ LI G L++
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 249 RRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGK 308
R+ T+ + E+IK C+ +H + +L L RK +V ++++ + G + G
Sbjct: 422 RKLSPNTRTYNELIKGYCKSNVHKAMGVLNKML---ERKVLPDVVTYNSL-IDGQCRSGN 477
Query: 309 AREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKKLREVGLVDLADILER 368
+ + + +RGL ++ Y M + + K R DL D LE+
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTS------------MIDSLCKSKRVEEACDLFDSLEQ 525
Query: 369 YG 370
G
Sbjct: 526 KG 527
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 25/256 (9%)
Query: 100 CYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETM 159
CY L+ G + E +++ M ++ P++ KM+ K+ EA
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA-----NQ 239
Query: 160 RLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLL 215
+ ++ E GL TY +I C + + A KVF EM +G + + + +++GL
Sbjct: 240 YVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC 299
Query: 216 AKHRVREAYQIV----DRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMH 271
R+ EA + D + Y LIK L R EA + +EM + G +P +H
Sbjct: 300 VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359
Query: 272 TYIMLLQG------------HLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERV 319
TY +L+ LG+ KG P V + G K G + + VE +
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 320 MNRGLEVPRFDYNKFL 335
+R L YN+ +
Sbjct: 420 ESRKLSPNTRTYNELI 435
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 51/255 (20%)
Query: 52 FHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCD 110
F M S+G + T + C + +A+ ++ K++E V PD Y LI+G+ D
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 111 KGDLIEASKIWNLMADEGFEPD----VEAVEKMMETLFKVNQGGEA-------LKLFETM 159
G A + M D G EP + ++ ++E + +G E + F+T+
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744
Query: 160 --RLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEM-RERGIQIDNLTLGSVVY 212
L++M E ++ +Y +I +C G + A+KVF+ M R GI L
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL------- 797
Query: 213 GLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHT 272
V++ L+ KL++ EA +V +MI G P + +
Sbjct: 798 ------------------------VFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833
Query: 273 YIMLLQGHLGRRGRK 287
+L+ G L ++G K
Sbjct: 834 CKVLICG-LYKKGEK 847
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 177/409 (43%), Gaps = 54/409 (13%)
Query: 5 VGKSRNIDLFWELLSDIARRRFATD-RTFVIALRTLGGARELKKCVEVFHLMNSNGYGYN 63
+GK R+ID LL ++ + TF I +R LG A ++ + E+ M+ G G +
Sbjct: 233 LGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPD 292
Query: 64 LETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWN 122
+ T ++DA+C + ++ AK V K+K KPD V Y L+ F D DL + W+
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWS 352
Query: 123 LMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR---------------------- 160
M +G PDV +++ L K GEA + MR
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 161 --------LKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLG 208
M+ LG+ TY + I + G A + FE+M+ +GI + +
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 209 SVVYGLLAKHRVREAYQI---VDRIGVMDISV-YHGLIKGLLKLRRAGEATQVFREMIKR 264
+ +Y L R REA QI + IG++ SV Y+ ++K K+ EA ++ EM++
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 265 GCEPTMHTYIMLLQG-------------HLGRRGRKGTDPLVNFDTIFVGGLVKVGKARE 311
GCEP + L+ + + K +V ++T+ + GL K GK +E
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL-LAGLGKNGKIQE 591
Query: 312 YIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKKLREVGLV 360
I+ E ++ +G +N + V + +M K+ ++G V
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 127/259 (49%), Gaps = 9/259 (3%)
Query: 27 ATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYV 86
T T+++ + G + + +E F M + G N+ N + ++ EAK +
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 87 VLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFK 145
LK+ + PD V Y +++ + G++ EA K+ + M + G EPDV V ++ TL+K
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK 550
Query: 146 VNQGGEALKLFETMRLKRMD-ELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDN 204
++ EA K+F MR+K M + + TY ++ + G + +A ++FE M ++G +
Sbjct: 551 ADRVDEAWKMF--MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT 608
Query: 205 LTLGSVVYGLLAKHRVREA----YQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFRE 260
+T ++ L V A ++++D V D+ Y+ +I GL+K + EA F +
Sbjct: 609 ITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 668
Query: 261 MIKRGCEPTMHTYIMLLQG 279
M K+ P T LL G
Sbjct: 669 M-KKLVYPDFVTLCTLLPG 686
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 127/285 (44%), Gaps = 17/285 (5%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRF-ATDRTFVIALRTLGGARELKKCVEVFH-LMNSN 58
+LD GKS ID +EL +++ A T I + L A + +++++ LM+
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEA 117
+ T ++D + + EAK + + ++ +P+ Y LI GF G+ A
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLST----YR 173
++ M EG PD++ +++ L V + E L F K + E GL+ Y
Sbjct: 946 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF-----KELKESGLNPDVVCYN 1000
Query: 174 LVIKWMCNKGMMSQAQKVFEEMR-ERGIQIDNLTLGSVVYGLLAKHRVREA---YQIVDR 229
L+I + + +A +F EM+ RGI D T S++ L V EA Y + R
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060
Query: 230 IGV-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTY 273
G+ ++ ++ LI+G + A V++ M+ G P TY
Sbjct: 1061 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 138/349 (39%), Gaps = 33/349 (9%)
Query: 32 FVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK 91
FV L G + + + ++ + Y + N + + G L E +
Sbjct: 677 FVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFS 736
Query: 92 EWVKPDGVCYK------HLIRGFCDKGDLIEASKIW-NLMADEGFEPDVEAVEKMMETLF 144
E + +G+C +IR C ++ A ++ D G +P + ++ L
Sbjct: 737 ERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLL 796
Query: 145 KVNQGGEALKLFETMRLKRMDELG-LSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
+ + A +F +++K + ++TY ++ G + + ++++EM + +
Sbjct: 797 EADMIEIAQDVF--LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854
Query: 204 NLTLGSVVYGLLAKHRVREAYQIV-----DRIGVMDISVYHGLIKGLLKLRRAGEATQVF 258
+T V+ GL+ V +A + DR Y LI GL K R EA Q+F
Sbjct: 855 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 259 REMIKRGCEPTMHTYIMLLQGHLGRRG-------------RKGTDPLVNFDTIFVGGLVK 305
M+ GC P Y +L+ G G+ G ++G P + ++ V L
Sbjct: 915 EGMLDYGCRPNCAIYNILING-FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 306 VGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEM 350
VG+ E + Y + + GL YN ++ EE +++F EM
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 18/226 (7%)
Query: 115 IEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRL 174
+++S M + +PD+ + E++ L + F+++ T
Sbjct: 64 MKSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNY 123
Query: 175 VIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---- 230
+++ + G + + VF+ M++R I+ D T ++ L K +++A + ++
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183
Query: 231 GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRR------ 284
V++ Y+GLI LLK R EA +V+R MI G P++ TY L+ G LG+R
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVG-LGKRRDIDSV 242
Query: 285 -------GRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRG 323
G P V TI + L + GK E + ++R+ + G
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG 288
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 164/374 (43%), Gaps = 51/374 (13%)
Query: 11 IDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
IDLF ++ I R + F L + ++ + +FH M G G++L + N V
Sbjct: 54 IDLFCKM---IQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 71 VDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
++ +C A VV K+ ++ +PD V LI GFC + +A + + M + GF
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETM-----------------------------R 160
PDV +++ K+ +A++LF+ M R
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 161 LKR---MDEL--GLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLL 215
L R M ++ + T+ VI +G S+A K++EEM R + D T S++ GL
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 216 AKHRVREAYQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMH 271
RV EA Q++D + + D+ Y+ LI G K +R E T++FREM +RG
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 272 TYIMLLQGHL--GRR-------GRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNR 322
TY ++QG+ GR R + P + +I + GL + + + E +
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410
Query: 323 GLEVPRFDYNKFLH 336
+E+ YN +H
Sbjct: 411 EIELDITTYNIVIH 424
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 110/244 (45%), Gaps = 27/244 (11%)
Query: 63 NLETLNKVVDAMCGYKLVEEAKYV-VLKLKE-----WVKPDGVCYKHLIRGFCDKGDLIE 116
N+ T V+D V+E K+ +KL E V PD Y LI G C G + E
Sbjct: 243 NVITFTAVIDV-----FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 117 ASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TY 172
A ++ +LM +G PDV ++ K + E KLF + M + GL TY
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF-----REMAQRGLVGDTITY 352
Query: 173 RLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV 232
+I+ G AQ++F M R + T ++YGL RV +A + + +
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 233 ----MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKG 288
+DI+ Y+ +I G+ K+ +A +FR + +G +P + +Y ++ G +R
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDK 469
Query: 289 TDPL 292
+D L
Sbjct: 470 SDLL 473
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 94/222 (42%), Gaps = 34/222 (15%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVV-LK 89
TF + + + ++++ M ++ T N +++ +C + V+EAK ++ L
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 90 LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
+ + PD V Y LI GFC + E +K++ MA G D +++ F+ +
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 150 G--------------------------------EALKLFETMRLKRMDELGLSTYRLVIK 177
+AL LFE M+ K EL ++TY +VI
Sbjct: 366 DAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ-KSEIELDITTYNIVIH 424
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHR 219
MC G + A +F + +G++ D ++ +++ G K +
Sbjct: 425 GMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 164/344 (47%), Gaps = 21/344 (6%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGY 60
+++ +GK + L W L+ D+ ++ + TF + R AR++K+ + FH M G+
Sbjct: 134 LIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGF 193
Query: 61 GYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASK 119
N+++D + + V +A+ V K+K+ +PD Y L+ G+ + +L+ +
Sbjct: 194 KMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDE 253
Query: 120 IWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWM 179
+ M DEGFEPDV A ++ K + EA++ F M +R + + +I +
Sbjct: 254 VNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEME-QRNCKPSPHIFCSLINGL 312
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GV-MDI 235
++ ++ A + FE + G ++ T ++V R+ +AY+ VD + GV +
Sbjct: 313 GSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNA 372
Query: 236 SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRR----------- 284
Y ++ L++++R+ EA +V++ M CEPT+ TY ++++ +
Sbjct: 373 RTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDE 429
Query: 285 -GRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVP 327
KG P ++ + + L K E +Y +++ G+ P
Sbjct: 430 MKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPP 473
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 158/346 (45%), Gaps = 28/346 (8%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFA----TDRTFVIALRTLGGARELKKCVEVFHLMN 56
M+ ++GK R D W L+ ++ R+F+ +T +I +R ++ K + FH
Sbjct: 167 MISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYK 224
Query: 57 SNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDK-GDLI 115
++ ++ A+C YK V +A +++ K+ D + ++ G+C+ G
Sbjct: 225 RFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPR 284
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLV 175
EA ++W M + G + DV + M+ K + LKLF+ M+ K E Y V
Sbjct: 285 EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMK-KECIEPDRKVYNAV 343
Query: 176 IKWMCNKGMMSQAQKVFEEM-RERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---G 231
+ + +S+A+ + + M E+GI+ + +T S++ L + EA Q+ D + G
Sbjct: 344 VHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKG 403
Query: 232 VMD-ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG----- 285
+ I YH ++ LR E ++ +M K GCEPT+ TYIML++ R
Sbjct: 404 LFPTIRTYHAFMR---ILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVL 460
Query: 286 -------RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGL 324
K P ++ + + GL GK E Y + + ++G+
Sbjct: 461 LLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGM 506
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 162/360 (45%), Gaps = 29/360 (8%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARR---RFATDRTFVIALRTLGGARELKKCVEVFHLMNS 57
M+DV+GK RN DL WEL++++ + + T T +R L + + K V+ F M
Sbjct: 172 MVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEM-E 230
Query: 58 NGYGYNLET--LNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLI 115
YG +T +N ++DA+ +E A V LKL + +KPD + LI GFC
Sbjct: 231 KSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFD 290
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLV 175
+A + +LM F PDV +E K ++ E MR + + TY +V
Sbjct: 291 DARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNP-NVVTYTIV 349
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GV 232
+ + +++A V+E+M+E G D S+++ L R ++A +I + + GV
Sbjct: 350 MHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGV 409
Query: 233 -MDISVYHGLIKGLLKLRRAGEATQVFREMIK---RGCEPTMHTYIMLLQ---------- 278
D+ VY+ +I L R A ++ + M C P + TY LL+
Sbjct: 410 RRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKL 469
Query: 279 -GHLGRRGRKGTDPLVNFDT--IFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFL 335
G L K D ++ T + + GL GK E + E + +G+ VPR K L
Sbjct: 470 LGILLHHMVKN-DVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGM-VPRDSTCKML 527
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 156/323 (48%), Gaps = 20/323 (6%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T+ LR+L + +LK+ +EV M ++ T +++A C V A ++ ++
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 91 KE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
++ PD V Y L+ G C +G L EA K N M G +P+V ++ ++ +
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
+A KL M L++ + T+ ++I ++C KG++ +A + E+M + G Q ++L+
Sbjct: 326 MDAEKLLADM-LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 210 VVYGLLAKHRVREAYQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
+++G + ++ A + ++R+ DI Y+ ++ L K + +A ++ ++ +G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 266 CEPTMHTYIMLLQGHLGRRGRKGT-----DPL----VNFDTI----FVGGLVKVGKAREY 312
C P + TY ++ G L + G+ G D + + DTI VGGL + GK E
Sbjct: 445 CSPVLITYNTVIDG-LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 313 IKYVERVMNRGLEVPRFDYNKFL 335
IK+ G+ +N +
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIM 526
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 113/263 (42%), Gaps = 20/263 (7%)
Query: 96 PDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKL 155
PD + LIRGFC G +A+KI ++ G PDV M+ K + AL +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 156 FETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLL 215
+ M + + TY +++ +C+ G + QA +V + M +R D +T ++
Sbjct: 195 LDRMSVSP----DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 216 AKHRVREAYQIV----DRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMH 271
V A +++ DR D+ Y+ L+ G+ K R EA + +M GC+P +
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 272 TYIMLLQGH------------LGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERV 319
T+ ++L+ L RKG P V I + L + G I +E++
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 320 MNRGLEVPRFDYNKFLHYFSNEE 342
G + YN LH F E+
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEK 393
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 126/271 (46%), Gaps = 29/271 (10%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEA 117
G+ ++ T N +++ +C L+ A ++ K+ + +P+ + Y L+ GFC + + A
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
+ M G PD+ M+ L K + +A+++ + K + L TY VI
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV-LITYNTVID 457
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA---YQIVDRIGVMD 234
+ G +A K+ +EMR + ++ D +T S+V GL + +V EA + +R+G+
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 235 ISV-YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLV 293
+V ++ ++ GL K R+ A MI RGC+P +Y
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY-------------------- 557
Query: 294 NFDTIFVGGLVKVGKAREYIKYVERVMNRGL 324
TI + GL G A+E ++ + + N+GL
Sbjct: 558 ---TILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 151/359 (42%), Gaps = 58/359 (16%)
Query: 46 KKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLI 105
+K ++ ++ +G ++ T N ++ C + A V+ ++ V PD V Y ++
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS--VSPDVVTYNTIL 211
Query: 106 RGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLK--- 162
R CD G L +A ++ + M PDV ++E + + G A+KL + MR +
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271
Query: 163 -----------------RMDEL--------------GLSTYRLVIKWMCNKGMMSQAQKV 191
R+DE + T+ ++++ MC+ G A+K+
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 192 FEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GVMDISV-YHGLIKGLLK 247
+M +G +T ++ L K + A I++++ G S+ Y+ L+ G K
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 248 LRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH------------LGRRGRKGTDP-LVN 294
++ A + M+ RGC P + TY +L L + KG P L+
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 295 FDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNE----EGVLMFEE 349
++T+ + GL K GK + IK ++ + + L+ Y+ + S E E + F E
Sbjct: 452 YNTV-IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 122/256 (47%), Gaps = 7/256 (2%)
Query: 16 ELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAM 74
+LL+D+ R+ F+ TF I + L L + +++ M +G N + N ++
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 75 CGYKLVEEA-KYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDV 133
C K ++ A +Y+ + PD V Y ++ C G + +A +I N ++ +G P +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 134 EAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFE 193
+++ L K + G+A+KL + MR K + + TY ++ + +G + +A K F
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTI-TYSSLVGGLSREGKVDEAIKFFH 508
Query: 194 EMRERGIQIDNLTLGSVVYGLLAKHRVREAYQ----IVDRIGVMDISVYHGLIKGLLKLR 249
E GI+ + +T S++ GL + A +++R + + Y LI+GL
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Query: 250 RAGEATQVFREMIKRG 265
A EA ++ E+ +G
Sbjct: 569 MAKEALELLNELCNKG 584
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 158/340 (46%), Gaps = 18/340 (5%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGY 60
M++ K R L W+L++ + +++ TF I +R A+++ + + F++M
Sbjct: 140 MIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDL 199
Query: 61 GYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKI 120
NL N ++ A+C K V +A+ V +++ PD Y L+ G+ + +L +A ++
Sbjct: 200 PPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREV 259
Query: 121 WNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMC 180
+ M D G PD+ M++ L K + EAL + +M + + Y +++
Sbjct: 260 FREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMD-PSICKPTTFIYSVLVHTYG 318
Query: 181 NKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GVMDISV 237
+ + +A F EM G++ D S++ +R++ Y+++ + GV S
Sbjct: 319 TENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSK 378
Query: 238 YHGLI-KGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG----------- 285
+I + L++ EA VFR+MIK CEP TY M+++ ++
Sbjct: 379 SCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYM 437
Query: 286 -RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGL 324
+KG P ++ ++ + GL + ++ +E ++ G+
Sbjct: 438 RKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 477
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 34/232 (14%)
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQA 188
+E V A M+E+ K+ Q L MR K+M L + T+ +V++ + +A
Sbjct: 130 YEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM--LNVETFCIVMRKYARAQKVDEA 187
Query: 189 QKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG---VMDISVYHGLIKGL 245
F M + + + + ++ L VR+A ++ + + D Y L++G
Sbjct: 188 IYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGW 247
Query: 246 LKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVK 305
K +A +VFREMI GC P + TY +I V L K
Sbjct: 248 GKEPNLPKAREVFREMIDAGCHPDIVTY-----------------------SIMVDILCK 284
Query: 306 VGKAREYIKYVERVMNRGLEVP-RFDYNKFLHYFSN----EEGVLMFEEMGK 352
G+ E + V R M+ + P F Y+ +H + EE V F EM +
Sbjct: 285 AGRVDEALGIV-RSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMER 335
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 173/411 (42%), Gaps = 58/411 (14%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVE-VFHLMNS-- 57
M++ + K ++ LS + + D ++ TL A K +E F LMN+
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPD---IVTYNTLISAYSSKGLMEEAFELMNAMP 297
Query: 58 -NGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLI 115
G+ + T N V++ +C + E AK V + L+ + PD Y+ L+ C KGD++
Sbjct: 298 GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV 357
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR--------------- 160
E K+++ M PD+ MM + +AL F +++
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 161 -------------------LKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQ 201
L++ + + TY ++ +C + M+ +A K+F EM ER +
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 202 IDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQV 257
D+ TL ++ G ++ A ++ ++ +D+ Y+ L+ G K+ A ++
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 258 FREMIKRGCEPTMHTYIMLL-----QGHLGRRGR-------KGTDPLVNFDTIFVGGLVK 305
+ +M+ + PT +Y +L+ +GHL R K P V + G +
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 306 VGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKKLRE 356
G A + ++E++++ G YN ++ F EE + + KK+ E
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 157/370 (42%), Gaps = 65/370 (17%)
Query: 27 ATDRTFVIALRTLGGARELKKCVEVFHLMNSNGY-------------------------- 60
+ D F + +RT AR+L++ E F L+ S G+
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222
Query: 61 ---------GYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCD 110
G N+ TLN +V+A+C +E+ + +++E V PD V Y LI +
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 111 KGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS 170
KG + EA ++ N M +GF P V ++ L K + A ++F M L+ +
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM-LRSGLSPDST 341
Query: 171 TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVY----------GLLAKHRV 220
TYR ++ C KG + + +KVF +MR R + D + S++ L+ + V
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 221 REAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
+EA I D + +Y LI+G + A + EM+++GC + TY +L G
Sbjct: 402 KEAGLIPDNV------IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 281 LGRRGRKGTDPLVN-------FD-----TIFVGGLVKVGKAREYIKYVERVMNRGLEVPR 328
R+ D L N F TI + G K+G + ++ +++ + + +
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 329 FDYNKFLHYF 338
YN L F
Sbjct: 516 VTYNTLLDGF 525
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 8/260 (3%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T+ L L + L + ++F+ M + TL ++D C ++ A + K+
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 91 KE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
KE ++ D V Y L+ GF GD+ A +IW M + P + ++ L
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
EA ++++ M K + + + IK C G S + E+M G D ++ +
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSM-IKGYCRSGNASDGESFLEKMISEGFVPDCISYNT 625
Query: 210 VVYGLLAKHRVREAYQIVDRIG------VMDISVYHGLIKGLLKLRRAGEATQVFREMIK 263
++YG + + + +A+ +V ++ V D+ Y+ ++ G + + EA V R+MI+
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE 685
Query: 264 RGCEPTMHTYIMLLQGHLGR 283
RG P TY ++ G + +
Sbjct: 686 RGVNPDRSTYTCMINGFVSQ 705
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 8/253 (3%)
Query: 23 RRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEE 82
R F T I + L+ +E+F M ++ T N ++D ++
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533
Query: 83 AKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMME 141
AK + + + + P + Y L+ C KG L EA ++W+ M + +P V M++
Sbjct: 534 AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIK 593
Query: 142 TLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRER--G 199
+ + E M + +S Y +I + MS+A + ++M E G
Sbjct: 594 GYCRSGNASDGESFLEKMISEGFVPDCIS-YNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Query: 200 IQIDNLTLGSVVYGLLAKHRVREA----YQIVDRIGVMDISVYHGLIKGLLKLRRAGEAT 255
+ D T S+++G +++++EA ++++R D S Y +I G + EA
Sbjct: 653 LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAF 712
Query: 256 QVFREMIKRGCEP 268
++ EM++RG P
Sbjct: 713 RIHDEMLQRGFSP 725
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 13/212 (6%)
Query: 1 MLDVVGKSRNIDLFWELLSD-IARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNG 59
+LD GK +ID E+ +D +++ T ++ I + L L + V+ M S
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
+ N ++ C + + + K+ E PD + Y LI GF + ++ +A
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 119 KIWNLMADE--GFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGL----STY 172
+ M +E G PDV ++ + NQ EA + L++M E G+ STY
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA-----EVVLRKMIERGVNPDRSTY 695
Query: 173 RLVIKWMCNKGMMSQAQKVFEEMRERGIQIDN 204
+I ++ +++A ++ +EM +RG D+
Sbjct: 696 TCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 155/349 (44%), Gaps = 21/349 (6%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRR--FATDRTFVIALRTLGGARELKKCVEVFHLMNSN 58
M+ ++ K R W L+ ++ + FV+ +R A +KK VEV M
Sbjct: 137 MVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKY 196
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
G + ++DA+C V+EA V ++E P+ + L+ G+C +G L+EA
Sbjct: 197 GLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAK 256
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
++ M + G EPD+ ++ + +A L MR KR E ++ Y ++I+
Sbjct: 257 EVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMR-KRGFEPNVNCYTVLIQA 315
Query: 179 MC-NKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GVMD 234
+C + M +A +VF EM G + D +T +++ G + + Y ++D + GVM
Sbjct: 316 LCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMP 375
Query: 235 ISV-YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTY--IMLLQGHLGRRGR----- 286
V Y ++ K + E ++ +M +RGC P + Y ++ L LG
Sbjct: 376 SQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLW 435
Query: 287 -----KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGL-EVPRF 329
G P V+ I + G G E + + +++RG+ P++
Sbjct: 436 NEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQY 484
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 21/264 (7%)
Query: 110 DKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGL 169
D G+L +W G+ E + M+ L K+ Q G L E MR + +
Sbjct: 109 DAGNLGYRFFLW-ATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEP 167
Query: 170 STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDR 229
+ ++++ + M+ +A +V +EM + G++ D G ++ L V+EA ++ +
Sbjct: 168 ELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFED 227
Query: 230 IG---VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG--HLGRR 284
+ ++ + L+ G + + EA +V +M + G EP + + LL G H G+
Sbjct: 228 MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 285 G----------RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNR-GLEVPRFDYNK 333
++G +P VN T+ + L + K + V M R G E Y
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 347
Query: 334 FLHYFSN----EEGVLMFEEMGKK 353
+ F ++G + ++M KK
Sbjct: 348 LISGFCKWGMIDKGYSVLDDMRKK 371
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 176/380 (46%), Gaps = 30/380 (7%)
Query: 1 MLDVVGKSRNIDLFWELLSDI-ARRRFATDRTFVIALRTLGGARELKKCVEVFHLM---- 55
M++ S + D +LLS I R +R+F++ R G A K V++FH M
Sbjct: 83 MIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEF 142
Query: 56 --NSNGYGYNLETLNKVVDAMCGYKLVEEAKYVV-LKLKEWVKPDGVCYKHLIRGFCDKG 112
+ +N LN +++ ++ +E YVV + + P+G+ + +I+ C
Sbjct: 143 RCKRSVKSFN-SVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLR 201
Query: 113 DLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTY 172
+ A +++ M + PD +M+ L K + EA+ L + M+ + + Y
Sbjct: 202 FVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV-IY 260
Query: 173 RLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI-- 230
++I +C KG +++ K+ + M +G + +T ++++GL K ++ +A +++R+
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
Query: 231 --GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG--------- 279
+ + Y LI GL+K RRA +A ++ M +RG H Y +L+ G
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEE 380
Query: 280 --HLGRR-GRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLH 336
L R+ KG P + ++ V GL + GK E + + R++ G + Y+ +
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440
Query: 337 YFSN----EEGVLMFEEMGK 352
F EE V +++EM K
Sbjct: 441 GFFKTGLCEEAVQVWKEMDK 460
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 7/288 (2%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATD-RTFVIALRTLGGARELKKCVEVFHLMNSNG 59
++ + K R +D E+ + R+ D T+ + L + + V + M S G
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252
Query: 60 YGYNLETLNKVVDAMCGY-KLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
+ N ++D +C L K V + P+ V Y LI G C KG L +A
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAV 312
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
+ M P+ ++ L K + +A++L +M +R L Y ++I
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME-ERGYHLNQHIYSVLISG 371
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI----GVMD 234
+ +G +A ++ +M E+G + + + +V GL + + EA +I++R+ + +
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 235 ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLG 282
Y L+KG K EA QV++EM K GC Y +L+ G G
Sbjct: 432 AYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCG 479
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 13/232 (5%)
Query: 50 EVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGF 108
E+ + M ++G N T + ++ L EEA V ++ K + CY LI G
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 477
Query: 109 CDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR--MDE 166
C G + EA +W+ M G +PD A +++ L + ALKL+ M + +
Sbjct: 478 CGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQ 537
Query: 167 LGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI 226
+ TY +++ +C + +S+A + M +RG D +T + + L K + +
Sbjct: 538 PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGR- 596
Query: 227 VDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQ 278
S L+ LLK +R A + M+ + P T+ M+++
Sbjct: 597 ---------SFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVR 639
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 168 GLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIV 227
GLS + LVIK +C + +A +VF M ER D T +++ GL + R+ EA ++
Sbjct: 187 GLS-FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 228 DRIGVMDIS----VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGR 283
D + S +Y+ LI GL K T++ M +GC P TY L+ G L
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG-LCL 304
Query: 284 RGR--------------KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRF 329
+G+ K V + T+ + GLVK +A + ++ + + RG + +
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTL-INGLVKQRRATDAVRLLSSMEERGYHLNQH 363
Query: 330 DYNKFLHYF----SNEEGVLMFEEMGKK 353
Y+ + EE + ++ +M +K
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEK 391
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 141/281 (50%), Gaps = 7/281 (2%)
Query: 5 VGKSRNIDLFWELLSDIARRRFATDRTFVIAL-RTLGGARELKKCVEVFHLMNSNGYGYN 63
+ KSRN D ++L + R + + L + G A + K ++VFH + S
Sbjct: 91 LAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRT 150
Query: 64 LETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWN 122
+++LN +++ + +E+AK K+ ++P+ V + LI+GF DK D A K+++
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFD 210
Query: 123 LMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNK 182
M + +P V ++ L + + G+A L E M KR+ + T+ L++K +C K
Sbjct: 211 EMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAV-TFGLLMKGLCCK 269
Query: 183 GMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDISVY 238
G ++A+K+ +M RG + + G ++ L + R+ EA ++ + D+ +Y
Sbjct: 270 GEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIY 329
Query: 239 HGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
+ L+ L R EA +V EM +GC+P TY M++ G
Sbjct: 330 NILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDG 370
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 147/334 (44%), Gaps = 27/334 (8%)
Query: 16 ELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAM 74
E L D+ R D+ T++ ++ + CV ++ M+ G + V+ +
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGL 337
Query: 75 CGYKLVEEAKYVVLK--LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPD 132
C + E Y V + +++ KP+ Y LI G+ G + +A ++ + M DEGF+PD
Sbjct: 338 CKEGKLNEG-YTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 133 VEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLST--YRLVIKWMCNKGMMSQAQK 190
V ++ L K + EAL F T R D L +++ Y +I + G + +A++
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRF---DGLAINSMFYSSLIDGLGKAGRVDEAER 453
Query: 191 VFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI-----GVMDISVYHGLIKGL 245
+FEEM E+G D+ +++ +V EA + R+ + Y L+ G+
Sbjct: 454 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGM 513
Query: 246 LKLRRAGEATQVFREMIKRGCEPTMHTYIML-----LQGHLGRRGRKGTDPLVNFDTIF- 299
K R EA +++ MI +G PT + L L G + R K D L I
Sbjct: 514 FKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVA-RACKILDELAPMGVILD 572
Query: 300 ------VGGLVKVGKAREYIKYVERVMNRGLEVP 327
+ L K G+ +E K + + RG EVP
Sbjct: 573 AACEDMINTLCKAGRIKEACKLADGITERGREVP 606
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 135/315 (42%), Gaps = 22/315 (6%)
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKH-LIRGFCDKGDLIEAS 118
Y +NLE +VD + K V+ ++V ++K++ P V + LI+ F G + E
Sbjct: 148 YTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELL 207
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
+W M + G EP + +M L A ++FE M R+ + TY +IK
Sbjct: 208 WVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKP-DIVTYNTMIKG 266
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA---YQIVDRIGV-MD 234
C G +A + +M RG + D +T +++ A YQ +D G+ +
Sbjct: 267 YCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP 326
Query: 235 ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH------------LG 282
+ +I GL K + E VF MI++G +P + Y +L+ G+ L
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 386
Query: 283 RRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN-- 340
R +G P V ++ V GL K G+ E + Y GL + Y+ +
Sbjct: 387 RMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAG 446
Query: 341 --EEGVLMFEEMGKK 353
+E +FEEM +K
Sbjct: 447 RVDEAERLFEEMSEK 461
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 158/382 (41%), Gaps = 63/382 (16%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRTFVIAL-RTLGGARELKKCVEVFHLMNSNG 59
++DV+ ++++D + S+I + F + AL ++ G +++ + V+ M NG
Sbjct: 158 LVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENG 217
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEAS 118
L T N +++ + V+ A+ V ++ +KPD V Y +I+G+C G +A
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAM 277
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRL 174
+ M G E D M++ + + G + L++ MDE G+ + L
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQ-----EMDEKGIQVPPHAFSL 332
Query: 175 VIKWMCNKGMMSQAQKVFEEMRER-----------------------------------G 199
VI +C +G +++ VFE M + G
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 200 IQIDNLTLGSVVYGLLAKHRVREA--YQIVDRIGVMDIS--VYHGLIKGLLKLRRAGEAT 255
+ D +T VV GL RV EA Y R + I+ Y LI GL K R EA
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 256 QVFREMIKRGCEPTMHTYIMLLQGHLGRRG-------------RKGTDPLVNFDTIFVGG 302
++F EM ++GC + Y L+ R +G D V TI + G
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 303 LVKVGKAREYIKYVERVMNRGL 324
+ K + E +K + ++++G+
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGI 534
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 151/316 (47%), Gaps = 18/316 (5%)
Query: 27 ATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYV 86
A +RT+ + + L K+ E++ M +G NL T N V++ +C ++A V
Sbjct: 231 ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQV 290
Query: 87 VLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFK 145
+++E V + V Y LI G C + L EA+K+ + M +G P++ +++
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCG 350
Query: 146 VNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL 205
V + G+AL L ++ + + L TY +++ C KG S A K+ +EM ERGI+ +
Sbjct: 351 VGKLGKALSLCRDLKSRGLSP-SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKV 409
Query: 206 TLGSVVYGLLAKHRVREAYQI---VDRIG-VMDISVYHGLIKGLLKLRRAGEATQVFREM 261
T ++ + +A Q+ ++ +G V D+ Y LI G + EA+++F+ M
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Query: 262 IKRGCEPTMHTYIMLLQGH------------LGRRGRKGTDPLVNFDTIFVGGLVKVGKA 309
+++ CEP Y ++ G+ L K P V + L K K+
Sbjct: 470 VEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKS 529
Query: 310 REYIKYVERVMNRGLE 325
+E + VE++++ G++
Sbjct: 530 KEAERLVEKMIDSGID 545
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 136/296 (45%), Gaps = 29/296 (9%)
Query: 70 VVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEG 128
++ C +E++ ++++L E+ P+ V Y LI G C KG++ +A ++ M G
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQA 188
+ ++ LFK + +++E M+ + L TY V+ +C G A
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFP-NLYTYNCVMNQLCKDGRTKDA 287
Query: 189 QKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDIS----VYHGLIKG 244
+VF+EMRERG+ + +T +++ GL + ++ EA ++VD++ I+ Y+ LI G
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 245 LLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLV 304
+ + G+A + R++ RG P++ TY I V G
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTY-----------------------NILVSGFC 384
Query: 305 KVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKKLREVGLV 360
+ G K V+ + RG++ + Y + F+ + + ++ + E+GLV
Sbjct: 385 RKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 143/319 (44%), Gaps = 18/319 (5%)
Query: 2 LDVVGKSRNIDLFWELLSDIARRRF-ATDRTFVIALRTLGGARELKKCVEVFHLMNSNGY 60
+D+ + W L+ + R + +TF I A + K V++F M+ +G
Sbjct: 98 IDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGC 157
Query: 61 GYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKI 120
+L + N ++D +C K VE+A + L+ D V Y ++ G+C +A ++
Sbjct: 158 FQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEV 217
Query: 121 WNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMC 180
M + G P++ M++ F+ Q A + F M+ KR E+ + TY V+
Sbjct: 218 LKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMK-KRDCEIDVVTYTTVVHGFG 276
Query: 181 NKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY----QIVDRIGVMDIS 236
G + +A+ VF+EM G+ T +++ L K V A ++V R +++
Sbjct: 277 VAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVT 336
Query: 237 VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH---------LGRRGRK 287
Y+ LI+GL ++ + M GCEP TY M+++ + LG +
Sbjct: 337 TYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Query: 288 GT-DPLVNFDT--IFVGGL 303
G+ D L N DT I + G+
Sbjct: 397 GSGDCLPNLDTYNILISGM 415
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 122/257 (47%), Gaps = 8/257 (3%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
+LDV+ KS+ ++ +EL + R RF+ D T+ + L + K +EV M G
Sbjct: 167 ILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG 225
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEAS 118
NL T N ++ + A L++K+ + D V Y ++ GF G++ A
Sbjct: 226 INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
+++ M EG P V M++ L K + A+ +FE M ++R E ++TY ++I+
Sbjct: 286 NVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEM-VRRGYEPNVTTYNVLIRG 344
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMD---- 234
+ + G S+ +++ + M G + + T ++ V +A + +++G D
Sbjct: 345 LFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPN 404
Query: 235 ISVYHGLIKGLLKLRRA 251
+ Y+ LI G+ +R+
Sbjct: 405 LDTYNILISGMFVRKRS 421
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 24/314 (7%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEA 117
GY + T + +V+ C V EA +V ++ E +PD V LI G C KG + EA
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
+ + M + GF+PD ++ L K AL LF M +R + + Y +VI
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKME-ERNIKASVVQYSIVID 253
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHR----VREAYQIVDRIGVM 233
+C G A +F EM +GI+ D +T S++ GL + + +++ R +
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG-------- 285
D+ + LI +K + EA +++ EMI RG P TY L+ G
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 286 ----RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNE 341
KG +P + +I + K + + ++ + ++GL YN + F +
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC-Q 432
Query: 342 EGVL-----MFEEM 350
G L +F+EM
Sbjct: 433 SGKLNAAKELFQEM 446
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 113/247 (45%), Gaps = 40/247 (16%)
Query: 78 KLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVE 137
KL+E + + + PD + Y LI GFC + L EA+++++LM +G EPD+
Sbjct: 330 KLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 389
Query: 138 KMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRE 197
++ + K + + ++LF + K + + TY ++ C G ++ A+++F+EM
Sbjct: 390 ILINSYCKAKRVDDGMRLFREISSKGLIPNTI-TYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 198 RGIQIDNLTLGSVVYGLLAKHRVREAYQIVDR---------IGVM--------------- 233
RG+ +T G ++ GL + +A +I ++ IG+
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508
Query: 234 ---------------DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQ 278
D+ Y+ +I GL K EA +FR+M + GC P TY +L++
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Query: 279 GHLGRRG 285
HLG G
Sbjct: 569 AHLGGSG 575
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 129/307 (42%), Gaps = 47/307 (15%)
Query: 3 DVVGKSRNIDLFW---------ELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVF 52
DVV S ID+F EL +++ R A D T+ + L + ++F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 53 HLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDK 111
LM S G ++ T + ++++ C K V++ + ++ + + P+ + Y L+ GFC
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 112 GDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLST 171
G L A +++ M G P V +++ L + +AL++FE M+ RM LG+
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM-TLGIGI 492
Query: 172 YRLVIKWMCN-----------------------------------KGMMSQAQKVFEEMR 196
Y ++I MCN KG +S+A +F +M+
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 197 ERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQ 256
E G D+ T ++ L + + ++++ + V S IK ++ + +
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDK 612
Query: 257 VFREMIK 263
F +M+
Sbjct: 613 SFLDMLS 619
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 120/300 (40%), Gaps = 27/300 (9%)
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETM--RL 161
+I +C K L+ A + G+EPD ++ + EA+ L + M
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 162 KRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVR 221
+R D + +ST +I +C KG +S+A + + M E G Q D +T G V+ L
Sbjct: 171 QRPDLVTVST---LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 222 EAYQIVDRIGVMDISV----YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLL 277
A + ++ +I Y +I L K +A +F EM +G + + TY L+
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 278 QGHL-------GRR------GRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGL 324
G G + GR +V F + + VK GK E + ++ RG+
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL-IDVFVKEGKLLEAKELYNEMITRGI 346
Query: 325 EVPRFDYNKFLHYFSNE----EGVLMFEEMGKKLREVGLVDLADILERYGQKMATRDRRR 380
YN + F E E MF+ M K E +V + ++ Y + D R
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 138/309 (44%), Gaps = 20/309 (6%)
Query: 68 NKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD 126
N ++D +C YK +++A + ++ + ++PD Y LI C+ G +AS++ + M +
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 127 EGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMS 186
P+V +++ K + EA KL++ M +KR + + TY +I C +
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 187 QAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDISVYHGLI 242
+A+ +FE M + + +T +++ G RV E ++ + V + Y LI
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 243 KGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG-------------RKGT 289
G + R A VF++M+ G P + TY +LL G L + G R
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG-LCKNGKLAKAMVVFEYLQRSTM 499
Query: 290 DPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEE 349
+P + I + G+ K GK + + + +G+ YN + F + +
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 350 MGKKLREVG 358
+ KK++E G
Sbjct: 560 LLKKMKEDG 568
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 156/360 (43%), Gaps = 36/360 (10%)
Query: 3 DVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGY 62
D++ +DLF ++ + R F + F L + + + + + M + G +
Sbjct: 60 DIIKVDDAVDLFGDM---VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH 116
Query: 63 NLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIW 121
+L T + ++ C + A V+ K+ K +PD V L+ G+C + +A +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCN 181
+ M + G++PD ++ LF N+ EA+ L + M ++R + L TY V+ +C
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM-VQRGCQPDLVTYGTVVNGLCK 235
Query: 182 KGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI---VDRIGV-MDISV 237
+G + A + ++M + I+ D + +++ GL + +A + +D G+ D+
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 238 YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDT 297
Y LI L R +A+++ +MI+R P + T+ +
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF-----------------------S 332
Query: 298 IFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEMGKK 353
+ VK GK E K + ++ R ++ F Y+ ++ F +E MFE M K
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 14/240 (5%)
Query: 63 NLETLNKVVDAMCGY-KLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIW 121
N+ T + ++DA KLVE K +K + PD Y LI GFC L EA ++
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGL----STYRLVIK 177
LM + P+V +++ K + E ++LF + M + GL TY +I
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF-----REMSQRGLVGNTVTYTTLIH 441
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI--GVM-- 233
AQ VF++M G+ + LT ++ GL ++ +A + + + M
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLV 293
DI Y+ +I+G+ K + + ++F + +G P + Y ++ G + ++ D L+
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 103/227 (45%), Gaps = 8/227 (3%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKH 103
L + +F LM S N+ T + ++ C K VEE + ++ + + + V Y
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
LI GF D A ++ M G P++ +++ L K + +A+ +FE ++
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 164 MDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA 223
M E + TY ++I+ MC G + ++F + +G+ + + +++ G K EA
Sbjct: 499 M-EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 224 YQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGC 266
++ ++ + + Y+ LI+ L+ + ++ +EM R C
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM--RSC 602
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 7 KSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLE 65
K++ ++ EL ++++R + T+ + AR+ VF M S G N+
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 66 TLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLM 124
T N ++D +C + +A V L + ++PD Y +I G C G + + +++ +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 125 ADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGL----STYRLVIKWMC 180
+ +G P+V A M+ + EA L LK+M E G TY +I+
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSL-----LKKMKEDGPLPNSGTYNTLIRARL 584
Query: 181 NKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY 224
G + ++ +EMR G D T+G +V +L R+ +++
Sbjct: 585 RDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 627
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 172/381 (45%), Gaps = 33/381 (8%)
Query: 11 IDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHL---MNSNGYGYNLETL 67
IDLF ++ + R F + F R L +LKK V L M G +L T
Sbjct: 70 IDLFSDM---VKSRPFPSIVDFN---RLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 68 NKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD 126
N V++ C V A ++ K LK +PD V L+ GFC + + +A + + M +
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 127 EGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMS 186
G++PD+ A ++++L K + +A F+ + K + + TY ++ +CN S
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRP-NVVTYTALVNGLCNSSRWS 242
Query: 187 QAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLI 242
A ++ +M ++ I + +T +++ + +V EA ++ + + M DI Y LI
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 243 KGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL-GRRGRKG------------T 289
GL R EA Q+F M+ +GC + +Y L+ G +R G
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 290 DPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVL 345
V ++T+ + G + G + ++ ++ G+ + YN L + E+ ++
Sbjct: 363 SNTVTYNTL-IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 346 MFEEMGKKLREVGLVDLADIL 366
+FE+M K+ ++ +V ++
Sbjct: 422 IFEDMQKREMDLDIVTYTTVI 442
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 129/285 (45%), Gaps = 7/285 (2%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
++D + K++ ++ ++ +I R+ + T+ + L + + M
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
N+ T + ++DA V EAK + ++ + + PD V Y LI G C + EA+
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
++++LM +G DV + ++ K + + +KLF M + + TY +I+
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS-NTVTYNTLIQG 374
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD----RIGVMD 234
G + +AQ+ F +M GI D T ++ GL + +A I + R +D
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 235 ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
I Y +I+G+ K + EA +F + +G +P + TY ++ G
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 121/259 (46%), Gaps = 15/259 (5%)
Query: 17 LLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC 75
LLSD+ +++ + T+ L ++ + E+F M ++ T + +++ +C
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 76 GYKLVEEAKYVV-LKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVE 134
+ ++EA + L + + D V Y LI GFC + + K++ M+ G +
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 135 AVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQK 190
+++ F+ +A + F +MD G+S TY +++ +C+ G + +A
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFS-----QMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 191 VFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLL 246
+FE+M++R + +D +T +V+ G+ +V EA+ + + + DI Y ++ GL
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 247 KLRRAGEATQVFREMIKRG 265
E ++ +M + G
Sbjct: 482 TKGLLHEVEALYTKMKQEG 500
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 83/168 (49%), Gaps = 2/168 (1%)
Query: 42 ARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVC 100
A+ ++ +++F M+ G N T N ++ V++A+ ++ + + PD
Sbjct: 343 AKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT 402
Query: 101 YKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR 160
Y L+ G CD G+L +A I+ M + D+ ++ + K + EA LF ++
Sbjct: 403 YNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 161 LKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLG 208
LK + + TY ++ +C KG++ + + ++ +M++ G+ ++ TL
Sbjct: 463 LKGLKP-DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 149/357 (41%), Gaps = 22/357 (6%)
Query: 3 DVVGKSRN---IDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNG 59
DV K+ + L ++ L + ++T F + +++ + K + + HL ++G
Sbjct: 105 DVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHG 164
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLK--LKEWVKPDGVCYKHLIRGFCDKGDLIEA 117
+ + + N V+DA K V K L+ V P+ Y LIRGFC G++ A
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
+++ M +G P+V +++ K+ + + KL +M LK + E L +Y +VI
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL-EPNLISYNVVIN 283
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAK---HRVREAYQIVDRIGVM- 233
+C +G M + V EM RG +D +T +++ G + H+ + + R G+
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH------------L 281
+ Y LI + K A + +M RG P TY L+ G L
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 282 GRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYF 338
G P V + G GK + I +E + +GL Y+ L F
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 137/305 (44%), Gaps = 30/305 (9%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATD-RTFVIALRTLGGARELKKCVEVFHLMNSNG 59
++ + K+ N++ E L + R + RT+ + + + V MN NG
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEAS 118
+ ++ T N +++ C +E+A V+ +KE + PD V Y ++ GFC D+ EA
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRL 174
++ M ++G +PD +++ + + EA L+E M +GL TY
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML-----RVGLPPDEFTYTA 525
Query: 175 VIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---- 230
+I C +G + +A ++ EM E+G+ D +T ++ GL + R REA +++ ++
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 231 GVMDISVYH---------------GLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIM 275
V YH LIKG EA QVF M+ + +P Y +
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 276 LLQGH 280
++ GH
Sbjct: 646 MIHGH 650
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 176/395 (44%), Gaps = 62/395 (15%)
Query: 16 ELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAM 74
LL ++ R D ++ +R +EL+K +E+ + M +G ++L T ++DA
Sbjct: 163 SLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAF 222
Query: 75 CGYKLVEEA-------KYVVLK-----------------------------LKEWVKPDG 98
C ++EA K++ L+ L+ P
Sbjct: 223 CKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 99 VCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFET 158
+ Y LIRGFC G L EAS+I+ M + G P+V +++ L V + EAL+L
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 159 MRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKH 218
M +++ +E TY ++I +C G+++ A ++ E M++R + DN+T ++ GL AK
Sbjct: 343 M-IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG 401
Query: 219 RVREAYQIV------DRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKR-GCEPTMH 271
+ EA +++ D+ Y+ LI GL K R +A ++ ++++ G +
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461
Query: 272 TYIMLLQ----GHLGRR---GRKGTDPLV--NFD--TIFVGGLVKVGKAREYIKYVERVM 320
T I+L G + + ++ +D + N D T + G K G + ++
Sbjct: 462 TNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMR 521
Query: 321 NRGLEVPRFDYNKFLHYFSNEEGVL-----MFEEM 350
L+ FDYN L +EG L +FEEM
Sbjct: 522 VSELQPSVFDYNCLLSSLC-KEGSLDQAWRLFEEM 555
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 163/360 (45%), Gaps = 42/360 (11%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVV-LK 89
T+ + L G + K+ +++ +LM N T N +++ +C LV +A +V L
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELM 378
Query: 90 LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLM-ADEGF-EPDVEAVEKMMETLFKVN 147
K +PD + Y L+ G C KGDL EASK+ LM D + +PDV + ++ L K N
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 148 QGGEALKLFETMRLKRMDELGLS---TYRLVIKWMCNKGMMSQAQKVFEEMRERGI---- 200
+ +AL +++ + +++LG T +++ G +++A ++++++ + I
Sbjct: 439 RLHQALDIYDLL----VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 201 -----QIDNLT---LGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAG 252
ID + +V GLL K RV E + V D Y+ L+ L K
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL-----QPSVFD---YNCLLSSLCKEGSLD 546
Query: 253 EATQVFREMIKRGCEPTMHTYIMLLQGHLGR------------RGRKGTDPLVNFDTIFV 300
+A ++F EM + P + ++ +++ G L R G P + + +
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606
Query: 301 GGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKKLREVGLV 360
+K+G E I + +++++ G E + L Y ++ E+ KKL + +V
Sbjct: 607 NRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIV 666
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 125/301 (41%), Gaps = 51/301 (16%)
Query: 51 VFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW----VKPDGVCYKHLIR 106
V LM G+ +N+ N ++ +C + +E K V L L+E + PD Y +IR
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLC--RNLECGKAVSL-LREMRRNSLMPDVFSYNTVIR 185
Query: 107 GFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDE 166
GFC+ +L +A ++ N M G + +++ K + EA+ + M+ + E
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGL-E 244
Query: 167 LGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI 226
L Y +I+ C+ G + + + +F+E+ ERG +T
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAIT-------------------- 284
Query: 227 VDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR 286
Y+ LI+G KL + EA+++F MI+RG P ++TY L+ G G
Sbjct: 285 -----------YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 287 KGTDPLVNF------------DTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKF 334
K L+N I + L K G + ++ VE + R YN
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 335 L 335
L
Sbjct: 394 L 394
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 142/344 (41%), Gaps = 55/344 (15%)
Query: 42 ARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVC 100
++ + + V + M GY N T N ++ + + EA ++ ++ + +PD V
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223
Query: 101 YKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR 160
Y ++ G C +GD A + N M EP V +++ L K +AL LF+ M
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 161 LKRMDELGLSTYRLVIKWMCN-----------------------------------KGMM 185
K + + TY +I +CN +G +
Sbjct: 284 TKGIRP-NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 186 SQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI----VDRIGVMDISVYHGL 241
+A+K+++EM +R I +T S++ G R+ EA Q+ V + D+ Y+ L
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 242 IKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG-------------RKG 288
IKG K +R E +VFREM +RG TY +L+QG L + G G
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG-LFQAGDCDMAQEIFKEMVSDG 461
Query: 289 TDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYN 332
P + + GL K GK + + E + +E + YN
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 115/242 (47%), Gaps = 6/242 (2%)
Query: 43 RELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCY 101
+ + + +F M + G N+ T + ++ +C Y +A ++ + E + PD +
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 102 KHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRL 161
LI F +G L+EA K+++ M +P + ++ ++ EA ++FE M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 162 KRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVR 221
K + TY +IK C + + +VF EM +RG+ + +T ++ GL
Sbjct: 390 KHCFP-DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 222 EAYQIVDRI---GVM-DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLL 277
A +I + GV +I Y+ L+ GL K + +A VF + + EPT++TY +++
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 278 QG 279
+G
Sbjct: 509 EG 510
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 130/308 (42%), Gaps = 42/308 (13%)
Query: 11 IDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
+ LF E+ + R F + F L + + + + M + G +N T + +
Sbjct: 66 VALFGEM---VKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 71 VDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
++ C + A V+ K+ K +P+ V L+ G+C + EA + + M G+
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETM------------------------------ 159
+P+ ++ LF N+ EA+ L + M
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 160 RLKRMD----ELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLL 215
L +M+ E G+ Y +I +C M A +F+EM +GI+ + +T S++ L
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 216 AKHRVREAYQI----VDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMH 271
R +A ++ ++R D+ + LI +K + EA +++ EM+KR +P++
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 272 TYIMLLQG 279
TY L+ G
Sbjct: 363 TYSSLING 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 131 PDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMS 186
P + K++ + K+N+ + L E +M LG+ TY ++I C + +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGE-----QMQNLGIPHNHYTYSILINCFCRRSQLP 133
Query: 187 QAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLI 242
A V +M + G + + +TL S++ G R+ EA +VD++ V + ++ LI
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193
Query: 243 KGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG 285
GL +A EA + M+ +GC+P + TY +++ G L +RG
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG-LCKRG 235
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 33/250 (13%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKH 103
L + ++F M S ++ T N ++ C YK VEE V ++ + + + V Y
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
LI+G GD A +I+ M +G P++ +++ L K + +A+ +FE ++ +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 164 MDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA 223
M E + TY ++I+ MC G + +F + +G++
Sbjct: 497 M-EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK---------------------- 533
Query: 224 YQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGR 283
D+ Y+ +I G + EA +F+EM + G P Y L++ L
Sbjct: 534 ---------PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584
Query: 284 RGRKGTDPLV 293
R+ + L+
Sbjct: 585 GDREASAELI 594
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 101/238 (42%), Gaps = 17/238 (7%)
Query: 21 IARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLV 80
+++ F T+ ++ + +++ +EVF M+ G N T N ++ +
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 81 EEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKM 139
+ A+ + ++ + V P+ + Y L+ G C G L +A ++ + EP + M
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 140 METLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERG 199
+E + K + + LF + LK + + Y +I C KG +A +F+EM+E G
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKP-DVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 200 IQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQV 257
+ S Y L + R+R+ D LIK + AG+A+ +
Sbjct: 567 TLPN-----SGCYNTLIRARLRDG----------DREASAELIKEMRSCGFAGDASTI 609
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T+ I ++ L A + E+F M S+G N+ T N ++D +C +E+A V L
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 91 -KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
+ ++P Y +I G C G + + ++ ++ +G +PDV A M+ +
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 150 GEALKLFETMRLKRMDELGL----STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL 205
EA LF K M E G Y +I+ G + ++ +EMR G D
Sbjct: 553 EEADALF-----KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 607
Query: 206 TLGSVVYGLLAKHRVREAY 224
T+G +V +L R+ +++
Sbjct: 608 TIG-LVTNMLHDGRLDKSF 625
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 12 DLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVV 71
++F E++SD T T + L G +L+K + VF + + + T N ++
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNG---KLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 72 DAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFE 130
+ MC VE+ + L + VKPD V Y +I GFC KG EA ++ M ++G
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 131 PD 132
P+
Sbjct: 569 PN 570
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 147/330 (44%), Gaps = 21/330 (6%)
Query: 58 NGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLIE 116
NG +N+ TLN +++ C A V+ K +K +PD + LI+G +G + E
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 117 ASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVI 176
A + + M + G +PDV ++ + + AL L M +R + + TY +I
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME-ERNVKADVFTYSTII 235
Query: 177 KWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY----QIVDRIGV 232
+C G + A +F+EM +GI+ +T S+V GL + + +V R V
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 233 MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH------------ 280
++ ++ L+ +K + EA ++++EMI RG P + TY L+ G+
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 281 LGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN 340
L R P + T + G V + + +K + RGL Y+ + F
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 341 EEGVLMFEEMGKKLREVGLVDLADILERYG 370
+ + EE+ +++ G+ L D++ YG
Sbjct: 416 SGKIKLAEELFQEMVSHGV--LPDVMT-YG 442
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 116/228 (50%), Gaps = 7/228 (3%)
Query: 63 NLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIW 121
N+ T N ++D ++EA + ++ + P+ + Y L+ G+C + L EA+ +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCN 181
+LM PD+ +++ V + + +K+F + KR TY ++++ C
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS-KRGLVANAVTYSILVQGFCQ 415
Query: 182 KGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI--GVMDISV-- 237
G + A+++F+EM G+ D +T G ++ GL ++ +A +I + + MD+ +
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 238 YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG 285
Y +I+G+ K + +A +F + +G +P + TY +++ G L ++G
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG-LCKKG 522
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 144/330 (43%), Gaps = 22/330 (6%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEA 117
GY + T N ++ + V EA +V ++ E +PD V Y ++ G C GD A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
+ M + + DV ++++L + A+ LF+ M K + + TY +++
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS-SVVTYNSLVR 271
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI----VDRIGVM 233
+C G + + ++M R I + +T ++ + + +++EA ++ + R
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH-LGRRGRKGTDPL 292
+I Y+ L+ G R EA + M++ C P + T+ L++G+ + +R G
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 293 VNFD-----------TIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN- 340
N +I V G + GK + + + +++ G+ Y L +
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 341 ---EEGVLMFEEMGKKLREVGLVDLADILE 367
E+ + +FE++ K ++G+V I+E
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 129/271 (47%), Gaps = 7/271 (2%)
Query: 17 LLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC 75
LL D+ R + TF + L +L++ E++ M + G N+ T N ++D C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 76 GYKLVEEAKYVV-LKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVE 134
+ EA ++ L ++ PD V + LI+G+C + + K++ ++ G +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 135 AVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEE 194
+++ + + A +LF+ M + + TY +++ +C+ G + +A ++FE+
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEM-VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Query: 195 MRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GV-MDISVYHGLIKGLLKLRR 250
+++ + + + +++ G+ +V +A+ + + GV ++ Y +I GL K
Sbjct: 464 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523
Query: 251 AGEATQVFREMIKRGCEPTMHTYIMLLQGHL 281
EA + R+M + G P TY L++ HL
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 100/250 (40%), Gaps = 35/250 (14%)
Query: 51 VFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFC 109
+ LM N ++ T ++ C K V++ V + K + + V Y L++GFC
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 110 DKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMD---- 165
G + A +++ M G PDV +++ L + +AL++FE ++ +MD
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 166 ------------------------------ELGLSTYRLVIKWMCNKGMMSQAQKVFEEM 195
+ + TY ++I +C KG +S+A + +M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 196 RERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEAT 255
E G ++ T +++ L + + ++++ + S IK ++ + +
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKR 594
Query: 256 QVFREMIKRG 265
R + +G
Sbjct: 595 LTLRYCLSKG 604
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 141/295 (47%), Gaps = 11/295 (3%)
Query: 1 MLDVVGKSRNI---DLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNS 57
++D + K R +L ++ + I R D T+ I + +L + M
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLR--PNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 58 NGYGYNLETLNKVVDAMCGYKLVEEAK-YVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIE 116
G ++ N +++ C + + A+ ++ + + ++P V Y L+ G+C KG + +
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 117 ASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVI 176
A ++++ M +G P + ++ LF+ +A+KLF M + TY ++I
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP-NRVTYNVMI 549
Query: 177 KWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI--GVMD 234
+ C +G MS+A + +EM E+GI D + +++GL + EA VD + G +
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 235 IS--VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRK 287
++ Y GL+ G + + EA V +EM++RG + + Y +L+ G L + RK
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK 664
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 164/377 (43%), Gaps = 29/377 (7%)
Query: 7 KSRNIDLFWELLSDIARRRFATD-RTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLE 65
K R+ L EL +D+ D + +R+L ++L + E+ M + G N+
Sbjct: 204 KFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIV 263
Query: 66 TLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLM 124
N ++D +C + V EA + L + +KPD V Y L+ G C + ++ + M
Sbjct: 264 PYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM 323
Query: 125 ADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWMC 180
F P AV ++E L K + EAL L +KR+ + G+S Y +I +C
Sbjct: 324 LCLRFSPSEAAVSSLVEGLRKRGKIEEALNL-----VKRVVDFGVSPNLFVYNALIDSLC 378
Query: 181 NKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY----QIVDRIGVMDIS 236
+A+ +F+ M + G++ +++T ++ + ++ A ++VD + +
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 237 VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR---------- 286
Y+ LI G K A EMI + EPT+ TY L+ G+ + G+
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK-GKINKALRLYHE 497
Query: 287 ---KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEG 343
KG P + T + GL + G R+ +K + ++ R YN + + E
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 344 VLMFEEMGKKLREVGLV 360
+ E K++ E G+V
Sbjct: 558 MSKAFEFLKEMTEKGIV 574
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 160/366 (43%), Gaps = 38/366 (10%)
Query: 7 KSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMN---SNGYGYN 63
K + ++ E++ ++ RF+ V +L + G R+ K E +L+ G N
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSL--VEGLRKRGKIEEALNLVKRVVDFGVSPN 366
Query: 64 LETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWN 122
L N ++D++C + EA+ + ++ K ++P+ V Y LI FC +G L A
Sbjct: 367 LFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLG 426
Query: 123 LMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNK 182
M D G + V ++ K A M K++ E + TY ++ C+K
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL-EPTVVTYTSLMGGYCSK 485
Query: 183 GMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDIS----VY 238
G +++A +++ EM +GI T +++ GL +R+A ++ + + ++ Y
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 239 HGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTI 298
+ +I+G + +A + +EM ++G P ++Y PL++
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY----------------RPLIH---- 585
Query: 299 FVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEMGKKL 354
GL G+A E +V+ + E+ Y LH F EE + + +EM ++
Sbjct: 586 ---GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 355 REVGLV 360
++ LV
Sbjct: 643 VDLDLV 648
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 38/217 (17%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
+KPD V Y +I GD EA IW+LM +EG P+ ++ L K EA
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 154 KLFETMR------------------------LKRMDEL------GL----STYRLVIKWM 179
L M+ +++ EL GL +TY ++I+
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GV-MDI 235
C +G + +A ++ M G+ D +T +++ L ++ V++A ++ + + G+ D
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 236 SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHT 272
Y+ LI G G+AT++ EM+++G P T
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 35/252 (13%)
Query: 131 PDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQK 190
P+V + ++ L K G A++LF M + + Y VI+ +C +S+A++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDM-VSVGIRPDVYIYTGVIRSLCELKDLSRAKE 248
Query: 191 VFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDISVYHGLIKGLL 246
+ M G ++ + ++ GL K +V EA I + D+ Y L+ GL
Sbjct: 249 MIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308
Query: 247 KLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKV 306
K++ ++ EM+ P+ L++ GL K
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVE-----------------------GLRKR 345
Query: 307 GKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEMGK---KLREVGL 359
GK E + V+RV++ G+ F YN + E L+F+ MGK + +V
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 360 VDLADILERYGQ 371
L D+ R G+
Sbjct: 406 SILIDMFCRRGK 417
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 41 GARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGV 99
G +++K VE+ H G N T N ++ C +EEA ++ ++ + V PD +
Sbjct: 765 GEVDMQKAVEL-HNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823
Query: 100 CYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETM 159
Y +I C + D+ +A ++WN M ++G PD A ++ + G+A +L M
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 164/376 (43%), Gaps = 33/376 (8%)
Query: 10 NIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNK 69
++DLF+ + + R + F L + ++ + ++ M G +NL T N
Sbjct: 65 SLDLFFHM---VQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 70 VVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEG 128
+++ C + A + K+ K +P V + L+ GFC + +A +++ M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGM 184
++P+V +++ L K Q AL L L RM++ G+ TY +I +C+ G
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDL-----LNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 185 MSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA----YQIVDRIGVMDISVYHG 240
S A ++ M +R I D T +++ + + RV EA +++ R DI Y
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 241 LIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRR------------GRKG 288
LI GL R EA ++F M+ +GC P + TY +L+ G+ + ++G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 289 TDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGV 344
TI + G + GK + R++ G+ YN LH + E+ +
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 345 LMFEEMGKKLREVGLV 360
++ +M K + +V
Sbjct: 417 VILADMQKNGMDADIV 432
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 18/278 (6%)
Query: 51 VFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFC 109
+F M GY N+ N ++D +C K V+ A ++ ++ K+ + PD V Y LI G C
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Query: 110 DKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGL 169
G +A+++ + M PDV +++ K + EA + +E M + +D +
Sbjct: 233 SSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP-DI 291
Query: 170 STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDR 229
TY L+I +C + +A+++F M +G D +T ++ G +V ++
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 351
Query: 230 IG----VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH----- 280
+ V + Y LI+G + + A ++FR M+ G P + TY +LL G
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 281 -------LGRRGRKGTDPLVNFDTIFVGGLVKVGKARE 311
L + G D + I + G+ K G+ +
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVAD 449
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 134/298 (44%), Gaps = 7/298 (2%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
++D + KS+ +D +LL+ + + D T+ + L + + M
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAK-YVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
++ T N ++DA V EA+ + ++ + PD V Y LI G C L EA
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
+++ M +G PDV ++ K + +KLF M +R TY ++I+
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS-QRGVVRNTVTYTILIQG 370
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIV---DRIGV-MD 234
C G ++ A+++F M G+ + +T +++GL ++ +A I+ + G+ D
Sbjct: 371 YCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDAD 430
Query: 235 ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPL 292
I Y+ +I+G+ K +A ++ + +G P + TY ++ G + R+ D L
Sbjct: 431 IVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Query: 7 KSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLE 65
KS+ ++ +L ++++R + T+ I ++ A +L E+F M G N+
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 66 TLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLM 124
T N ++ +C +E+A ++ + K + D V Y +IRG C G++ +A I+ +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 125 ADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR 160
+G PD+ MM L+K EA LF M+
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 146/320 (45%), Gaps = 42/320 (13%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARR--RFATDRTFVIALRTLGGARELKKCVEVFHLMNSN 58
M+ ++ K R W L+ ++ + + FV+ ++ A +KK +EV M
Sbjct: 153 MVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKF 212
Query: 59 GYGYNLETLNKVVDAMCGY-------KLVE---------------------------EAK 84
G+ + ++DA+C + KL E EAK
Sbjct: 213 GFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAK 272
Query: 85 YVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETL 143
YV++++ E +PD V Y +L+ G+ + G + +A + M GFEP+ +++ L
Sbjct: 273 YVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQAL 332
Query: 144 FKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
KV++ EA+K+F M + E + TY ++ C G + + V ++M ++G+
Sbjct: 333 CKVDRMEEAMKVFVEME-RYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPS 391
Query: 204 NLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFR 259
LT ++ K E ++++++ + DI +Y+ +I+ KL EA +++
Sbjct: 392 ELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWN 451
Query: 260 EMIKRGCEPTMHTYIMLLQG 279
EM + G P + T+++++ G
Sbjct: 452 EMEENGLSPGVDTFVIMING 471
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 29/258 (11%)
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
L++ F + +A ++ + M GFEPD +++ L K +A KLFE MR++
Sbjct: 189 LVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRF 248
Query: 164 MDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA 223
L T L+ W C G M +A+ V +M E G + D + +++ G ++ +A
Sbjct: 249 PVNLRYFT-SLLYGW-CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 306
Query: 224 YQIVD---RIGV-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
Y ++ R G + + Y LI+ L K+ R EA +VF EM + CE + TY
Sbjct: 307 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTY------ 360
Query: 280 HLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFS 339
T V G K GK + ++ ++ +GL Y +
Sbjct: 361 -----------------TALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHE 403
Query: 340 NEEGVLMFEEMGKKLREV 357
+E E+ +K+R++
Sbjct: 404 KKESFEECLELMEKMRQI 421
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 149/354 (42%), Gaps = 38/354 (10%)
Query: 37 RTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VK 95
R L A + +K V M G+ + T +KV++ +C +E A + ++K +
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515
Query: 96 PDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKL 155
D Y ++ FC G + +A K +N M + G P+V ++ K + A +L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 156 FETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEM----------------RERG 199
FETM L + TY +I C G + +A ++FE M +
Sbjct: 576 FETM-LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634
Query: 200 IQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDIS----VYHGLIKGLLKLRRAGEAT 255
+ + +T G+++ G HRV EA +++D + + VY LI GL K+ + EA
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 256 QVFREMIKRGCEPTMHTYIMLLQGH------------LGRRGRKGTDPLVNFDTIFVGGL 303
+V EM + G T++TY L+ + L + P V T + GL
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754
Query: 304 VKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEMGKK 353
KVGK E K ++ + +G + Y + F E + + E MG K
Sbjct: 755 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 124/295 (42%), Gaps = 43/295 (14%)
Query: 44 ELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYK 102
+L + EV M+ +G+ L T + ++D K + A V+ K L+ P+ V Y
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 103 HLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLK 162
+I G C G EA K+ +M ++G +P+V M++ + + L+L E M K
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 163 RMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRER------------------------ 198
+ TYR++I C G + A + EEM++
Sbjct: 809 GVAP-NYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESL 867
Query: 199 GI-----QIDNLTLGSV----VYGLLAKHRVREAYQIVDRIGVMDI------SVYHGLIK 243
G+ Q D SV + L+ R+ A ++++ + S Y+ LI+
Sbjct: 868 GLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIE 927
Query: 244 GLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTI 298
L + A Q+F EM K+G P M ++ L++G R K ++ L+ D I
Sbjct: 928 SLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLF--RNSKISEALLLLDFI 980
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 143/338 (42%), Gaps = 26/338 (7%)
Query: 39 LGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPD 97
+ G++++ F + N N+ T ++D C VEEA+ ++ + E +P+
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Query: 98 GVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFE 157
+ Y LI G C G L EA ++ M++ GF + +++ FKV + A K+
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 158 TMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAK 217
M L+ + Y +I +C G +A K+ + M E+G Q + +T +++ G
Sbjct: 734 KM-LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 792
Query: 218 HRVREAYQIVDRIGVMDIS----VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHT- 272
++ ++++R+G ++ Y LI K A + EM K+ PT HT
Sbjct: 793 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWPT-HTA 850
Query: 273 -YIMLLQGH----------LGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMN 321
Y +++G L G+ T P ++ + + L+K + ++ +E V
Sbjct: 851 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 322 RGLEVPRFD--YNKFLHYFS----NEEGVLMFEEMGKK 353
+ + YN + E +F EM KK
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK 948
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 116/291 (39%), Gaps = 30/291 (10%)
Query: 12 DLFWELLSDIARRRFATDRTFVIALRTLG----GARELKKCVEVFHLMNSNGYGYNLETL 67
LF E + + R R + V+ TL ++L +C V ++M G + +
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 68 NKVVDAMCGYKLVEEAKYVVLKLKEWVK----PDGVCYKHLIRGFCDKGDLIE------A 117
N +V A C + Y LK+ VK P V Y LI C D + A
Sbjct: 376 NSLVHAYCTSG---DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLA 432
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGL----STYR 173
K ++ M G + V L G+ K F +R M G STY
Sbjct: 433 EKAYSEMLAAGVVLNKINVSSFTRCLC---SAGKYEKAFSVIR--EMIGQGFIPDTSTYS 487
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA---YQIVDRI 230
V+ ++CN M A +FEEM+ G+ D T +V + +A + + +
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547
Query: 231 GVM-DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
G ++ Y LI LK ++ A ++F M+ GC P + TY L+ GH
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 142/373 (38%), Gaps = 67/373 (17%)
Query: 28 TDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVV 87
T R F +L +G RE VE + + + K++ +C L EEA +
Sbjct: 272 TLRCFAYSLCKVGKWREALTLVETENFVPDTVF------YTKLISGLCEASLFEEAMDFL 325
Query: 88 LKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKV 146
+++ P+ V Y L+ G +K L ++ N+M EG P + ++
Sbjct: 326 NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS 385
Query: 147 NQGGEALKLFETMRLKRMDELGLSTYRLVIKWMC------NKGMMSQAQKVFEEMRERGI 200
A KL + M +K G Y ++I +C N ++ A+K + EM G+
Sbjct: 386 GDHSYAYKLLKKM-VKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGV 444
Query: 201 QIDNLTLGSVVYGLLAKHRVREAYQIV-DRIG---VMDISVYHGLIKGLL---------- 246
++ + + S L + + +A+ ++ + IG + D S Y ++ L
Sbjct: 445 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504
Query: 247 ---KLRRAG----------------------EATQVFREMIKRGCEPTMHTYIMLLQGHL 281
+++R G +A + F EM + GC P + TY L+ +L
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 282 GRRG------------RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRF 329
+ +G P + + + G K G+ + + ER M +VP
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER-MCGSKDVPDV 623
Query: 330 DYNKFLHYFSNEE 342
D F Y N E
Sbjct: 624 DM-YFKQYDDNSE 635
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 97/209 (46%), Gaps = 8/209 (3%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T+ + G +++ C+E+ M S G N T ++D C ++ A ++ ++
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Query: 91 KEWVKPDGVC-YKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
K+ P Y+ +I GF + IE+ + + + + P + +++ L K +
Sbjct: 841 KQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898
Query: 150 GEALKLFE---TMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLT 206
AL+L E T +D STY +I+ +C + A ++F EM ++G+ + +
Sbjct: 899 EMALRLLEEVATFSATLVDYS--STYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS 956
Query: 207 LGSVVYGLLAKHRVREAYQIVDRIGVMDI 235
S++ GL ++ EA ++D I M+I
Sbjct: 957 FCSLIKGLFRNSKISEALLLLDFISHMEI 985
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 3 DVVGKSRNIDLFW---------ELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVF 52
DVV S ID F EL ++ +R + D T+ + +L K +
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 53 HLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDK 111
LM S G G N+ T N +++ C L+++ + K+ V D V Y LI+GFC+
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 112 GDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLST 171
G L A +++ M PD+ + + +++ L + +AL++FE + +M EL +
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM-ELDIGI 494
Query: 172 YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG 231
Y ++I MCN + A +F + +G++
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVK------------------------------ 524
Query: 232 VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLG 282
D+ Y+ +I GL K EA +FR+M + G P TY +L++ HLG
Sbjct: 525 -PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLG 574
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 155/372 (41%), Gaps = 23/372 (6%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATD-RTFVIALRTLGGARELKKCVEVFHLMNSNG 59
+ VV +++ DL +L + + A + T I + R+L + G
Sbjct: 78 LFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLG 137
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEAS 118
Y + T + +++ +C V EA +V ++ E KP + L+ G C G + +A
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
+ + M + GF+P+ +++ + K Q A++L M +++ +L Y ++I
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKI-KLDAVKYSIIIDG 256
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI----VDRIGVMD 234
+C G + A +F EM +G + D + +++ G R + ++ + R D
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 235 ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH------------LG 282
+ + LI +K + EA ++ +EMI+RG P TY L+ G L
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 283 RRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN-- 340
KG P + I + G K + ++ ++ RG+ YN + F
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 341 --EEGVLMFEEM 350
E +F+EM
Sbjct: 437 KLEVAKELFQEM 448
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 146/341 (42%), Gaps = 42/341 (12%)
Query: 11 IDLFWELLSDIARRRFAT-DRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNK 69
+DLF E+ R R R F + RT ++ +++ M G +NL TL+
Sbjct: 57 VDLFQEMTRSRPRPRLIDFSRLFSVVART----KQYDLVLDLCKQMELKGIAHNLYTLSI 112
Query: 70 VVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEG 128
+++ C + + A + K+ K +PD V + LI G C +G + EA ++ + M + G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGM 184
+P + + ++ L + +A+ L + RM E G TY V+K MC G
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLID-----RMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 185 MSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHG 240
+ A ++ +M ER I++D + ++ GL + A+ + + + + DI +Y
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 241 LIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFV 300
LI+G R + ++ R+MIKR P + + + +
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF-----------------------SALI 324
Query: 301 GGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNE 341
VK GK RE + + ++ RG+ Y + F E
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 103/200 (51%), Gaps = 6/200 (3%)
Query: 90 LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
++ + PD V Y LI GFC + L +A+ + +LM +G P++ ++ K N
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
+ L+LF M L+ + TY +I+ C G + A+++F+EM R ++ D ++
Sbjct: 404 DDGLELFRKMSLRGV-VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 210 VVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
++ GL +A +I ++I +DI +Y+ +I G+ + +A +F + +G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 266 CEPTMHTYIMLLQGHLGRRG 285
+P + TY +++ G L ++G
Sbjct: 523 VKPDVKTYNIMI-GGLCKKG 541
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 136/329 (41%), Gaps = 19/329 (5%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRT-FVIALRTLGGARELKKCVEVFHLMNSNG 59
+L V+ KS L ELL + R+ D + I + L L +F+ M G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 60 YGYNLETLNKVVDAMC-GYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
+ ++ ++ C + + AK + +K + PD V + LI F +G L EA
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
++ M G PD +++ K NQ +A + + M K + T+ ++I
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP-NIRTFNILING 396
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGL--LAKHRV-REAYQ-IVDRIGVMD 234
C ++ ++F +M RG+ D +T +++ G L K V +E +Q +V R D
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 235 ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRR---------- 284
I Y L+ GL +A ++F ++ K E + Y +++ G
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 285 --GRKGTDPLVNFDTIFVGGLVKVGKARE 311
KG P V I +GGL K G E
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 138/303 (45%), Gaps = 24/303 (7%)
Query: 70 VVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEG 128
++DA+C YK V +A + ++ + ++P+ V Y LIR C+ G +AS++ + M +
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQA 188
P+V +++ K + EA KL++ M +KR + + TY +I C + +A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 189 QKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDISVYHGLIKG 244
+ +FE M + + +T +++ G RV E ++ + V + Y+ LI+G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 245 LLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG-------------RKGTDP 291
L + A ++F++M+ G P + TY +LL G L + G + +P
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG-LCKYGKLEKALVVFEYLQKSKMEP 498
Query: 292 LVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFS----NEEGVLMF 347
+ I + G+ K GK + + +G++ Y + F EE +F
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 348 EEM 350
EM
Sbjct: 559 REM 561
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 139/321 (43%), Gaps = 28/321 (8%)
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
Y N T N ++ + + EA ++ ++ +PD Y ++ G C +GD+ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
+ M E DV +++ L +AL LF M K + + TY +I+
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP-NVVTYNSLIRC 299
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD----RIGVMD 234
+CN G S A ++ +M ER I + +T +++ + + ++ EA ++ D R D
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 235 ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG--------------- 279
I Y LI G R EA +F MI + C P + TY L++G
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 280 HLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFL---- 335
+ +RG G V ++T+ + GL + G K +++++ G+ Y+ L
Sbjct: 420 EMSQRGLVGNT--VTYNTL-IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 336 HYFSNEEGVLMFEEMGKKLRE 356
Y E+ +++FE + K E
Sbjct: 477 KYGKLEKALVVFEYLQKSKME 497
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 133/326 (40%), Gaps = 51/326 (15%)
Query: 7 KSRNIDLFWELLSDIARRRFATDRT-FVIALRTLGGARELKKCVEVFHLMNSNGYGYNLE 65
K +IDL LL + + + D + + L + + + +F M++ G N+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 66 TLNKVVDAMCGY------------------------------------KLVEEAKYVVLK 89
T N ++ +C Y KLVE K
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 90 LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
+K + PD Y LI GFC L EA ++ LM + P+V +++ K +
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 150 GEALKLFETMRLKRMDELGL----STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL 205
E ++LF + M + GL TY +I+ + G AQK+F++M G+ D +
Sbjct: 412 EEGMELF-----REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 206 TLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFREM 261
T ++ GL ++ +A + + + DI Y+ +I+G+ K + + +F +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 262 IKRGCEPTMHTYIMLLQGHLGRRGRK 287
+G +P + Y ++ G R+G K
Sbjct: 527 SLKGVKPNVIIYTTMISG-FCRKGLK 551
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 149/352 (42%), Gaps = 36/352 (10%)
Query: 11 IDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
+DLF E+ + R + F L + + + + M + Y+L + N +
Sbjct: 65 VDLFGEM---VQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 71 VDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
++ C + A V+ K+ K +PD V L+ G+C + EA + + M +
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQ 189
+P+ ++ LF N+ EA+ L + M + R + L TY V+ +C +G + A
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRM-VARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 190 KVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI---VDRIGV-MDISVYHGLIKGL 245
+ ++M + I+ D + +++ L V +A + +D G+ ++ Y+ LI+ L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 246 LKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVK 305
R +A+++ +MI+R P + T+ + + VK
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTF-----------------------SALIDAFVK 337
Query: 306 VGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEMGKK 353
GK E K + ++ R ++ F Y+ ++ F +E MFE M K
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 7/203 (3%)
Query: 21 IARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLV 80
I++ F T+ ++ A+ +++ +E+F M+ G N T N ++ +
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 81 EEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKM 139
+ A+ + K+ + V PD + Y L+ G C G L +A ++ + EPD+ M
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 140 METLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERG 199
+E + K + + LF ++ LK + + Y +I C KG+ +A +F EM+E G
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKP-NVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 200 IQIDNLTLGSVVYGLLAKHRVRE 222
++ T Y L + R+R+
Sbjct: 566 TLPNSGT-----YNTLIRARLRD 583
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 6/221 (2%)
Query: 7 KSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLE 65
K++ ++ EL ++++R + T+ ++ L A + ++F M S+G ++
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 66 TLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLM 124
T + ++D +C Y +E+A V L K ++PD Y +I G C G + + ++ +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 125 ADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS-TYRLVIKWMCNKG 183
+ +G +P+V M+ + EA LF M K L S TY +I+ G
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM--KEDGTLPNSGTYNTLIRARLRDG 584
Query: 184 MMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY 224
+ + ++ +EMR G D T+ S+V +L R+ ++Y
Sbjct: 585 DKAASAELIKEMRSCGFVGDASTI-SMVINMLHDGRLEKSY 624
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 167/389 (42%), Gaps = 56/389 (14%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARR-RFATDRTFVIALRTLGGARELKKCVEVFHLMNSNG 59
++D++ ++ +D +EL + + F RT I + L +++L + +F M+
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
+ T ++D + V++A V K L + + + Y LI+ F + G +
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR--------------- 163
KI+ M ++ PD++ + M+ +FK + + +FE ++ +R
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 164 ---------------MDELGL----STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDN 204
M E G Y +VI C G +++A ++ EEM+ +G +
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 205 LTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQVFRE 260
+T GSV+ GL R+ EAY + + +++ +Y LI G K+ R EA + E
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 261 MIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDT--------------IFVGGLVKV 306
++++G P ++T+ LL + + + + LV F + I + GL KV
Sbjct: 683 LMQKGLTPNLYTWNSLLDALV--KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 307 GKAREYIKYVERVMNRGLEVPRFDYNKFL 335
K + + + + +G++ Y +
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMI 769
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 5/187 (2%)
Query: 97 DGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLF 156
D Y +I GFC G + +A ++ M +GFEP V +++ L K+++ EA LF
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 157 ETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLA 216
E + KR+ EL + Y +I G + +A + EE+ ++G+ + T S++ L+
Sbjct: 646 EEAKSKRI-ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Query: 217 KHRVREA---YQIVDRIGVMDISVYHG-LIKGLLKLRRAGEATQVFREMIKRGCEPTMHT 272
+ EA +Q + + V +G LI GL K+R+ +A ++EM K+G +P+ +
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 764
Query: 273 YIMLLQG 279
Y ++ G
Sbjct: 765 YTTMISG 771
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 167/419 (39%), Gaps = 59/419 (14%)
Query: 6 GKSRNIDLFWELLSDIARRRFATDRT-FVIALRTLGGARELKKCVEVFHLMNSNGYGYNL 64
K +D LL ++ D + + + + G ++ + FH + +NG +
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 65 ETLNKVVDAMCGYKLVEEAKYVVLKLKEWVK-PDGVCYKHLIRGFCDKGDLIEASKIWNL 123
T ++ +C ++EA + L++ + P Y +I G+ G EA +
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 124 MADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKG 183
+G P V A ++ L K+ + EALK+FE M K+ LSTY ++I +C G
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM--KKDAAPNLSTYNILIDMLCRAG 391
Query: 184 MMSQA-----------------------------QKV------FEEMRERGIQIDNLTLG 208
+ A QK+ FEEM + D +T
Sbjct: 392 KLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 451
Query: 209 SVVYGLLAKHRVREAYQIVDRIGVMDIS----VYHGLIKGLLKLRRAGEATQVFREMIKR 264
S++ GL RV +AY++ +++ D VY LIK R + +++++MI +
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 265 GCEPT---MHTYI-MLLQGHLGRRGRKGTD--------PLVNFDTIFVGGLVKVGKAREY 312
C P ++TY+ + + +GR + P +I + GL+K G A E
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 313 IKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEMGKKLREVGLVDLADILE 367
+ + +G + YN + F + + EEM K E +V +++
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 170/428 (39%), Gaps = 61/428 (14%)
Query: 2 LDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSN-- 58
+D GK +D+ W+ +I D T+ + L A L + VE+F + N
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 59 ------------GYG--------YNL---ETLNKVVDAMCGYKL----------VEEAKY 85
GYG Y+L + + ++ Y V+EA
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364
Query: 86 VVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFK 145
V ++K+ P+ Y LI C G L A ++ + M G P+V V M++ L K
Sbjct: 365 VFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCK 424
Query: 146 VNQGGEALKLFETMRLK--RMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
+ EA +FE M K DE+ T+ +I + G + A KV+E+M + + +
Sbjct: 425 SQKLDEACAMFEEMDYKVCTPDEI---TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTN 481
Query: 204 NLTLGSVVYGLLAKHRVREAYQI----VDRIGVMDISVYHGLIKGLLKLRRAGEATQVFR 259
++ S++ R + ++I +++ D+ + + + + K + +F
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 260 EMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVN--------FDT----IFVGGLVKVG 307
E+ R P +Y +L+ G + T L DT I + G K G
Sbjct: 542 EIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCG 601
Query: 308 KAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEMGKKLREVGLVDLA 363
K + + +E + +G E Y + + +E ++FEE K E+ +V +
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 364 DILERYGQ 371
+++ +G+
Sbjct: 662 SLIDGFGK 669
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 3/201 (1%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATD-RTFVIALRTLGGARELKKCVEVFHLMNSNG 59
++D GK ID + +L ++ ++ + T+ L L A E+ + + F M
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
N T +++ +C + +A ++ K+ +KP + Y +I G G++ EA
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
+++ G PD M+E L N+ +A LFE R +R + T +++
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR-RRGLPIHNKTCVVLLDT 841
Query: 179 MCNKGMMSQAQKVFEEMRERG 199
+ + QA V +RE G
Sbjct: 842 LHKNDCLEQAAIVGAVLRETG 862
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 124/304 (40%), Gaps = 46/304 (15%)
Query: 23 RRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEE 82
R F+ T + A + + + + +F M GY + ++ V+
Sbjct: 165 RPAFSAYTTLIGAFSAVNHSDMM---LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDS 221
Query: 83 AKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMME 141
A ++ ++K + D V Y I F G + A K ++ + G +PD M+
Sbjct: 222 ALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIG 281
Query: 142 TLFKVNQGGEALKLFETMRLKR--------------------MDEL-------------- 167
L K N+ EA+++FE + R DE
Sbjct: 282 VLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP 341
Query: 168 GLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKH-RVREAYQI 226
+ Y ++ + G + +A KVFEEM++ NL+ +++ +L + ++ A+++
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP--NLSTYNILIDMLCRAGKLDTAFEL 399
Query: 227 VD---RIGVM-DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLG 282
D + G+ ++ + ++ L K ++ EA +F EM + C P T+ L+ G LG
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG-LG 458
Query: 283 RRGR 286
+ GR
Sbjct: 459 KVGR 462
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 146/316 (46%), Gaps = 30/316 (9%)
Query: 2 LDVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYG 61
+D++GK++ D E + + + T T +R GA E ++ V +F + G
Sbjct: 128 VDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLE 187
Query: 62 YNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIW 121
N E++N ++D +C K VE+A+ V+L+LK + P+ + I G+C + EA +W
Sbjct: 188 KNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEA--LW 245
Query: 122 NL--MADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLV 175
+ M GF P V + ++ Q E +K++E L M+ G TY +
Sbjct: 246 TIQEMKGHGFRPCVISYTTIIRCYC---QQFEFIKVYEM--LSEMEANGSPPNSITYTTI 300
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI----VDRIG 231
+ + + +A +V M+ G + D+L +++ L R+ EA ++ + +G
Sbjct: 301 MSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELG 360
Query: 232 V-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRG-CEPTMHTYIMLLQGHLGRRGRKGT 289
V ++ S Y+ +I +A ++ +EM C P +HTY LL+ +RG
Sbjct: 361 VSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF-KRG---- 415
Query: 290 DPLVNFDTIFVGGLVK 305
D + VG L+K
Sbjct: 416 ------DVVEVGKLLK 425
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 146/316 (46%), Gaps = 30/316 (9%)
Query: 2 LDVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYG 61
+D++GK++ D E + + + T T +R GA E ++ V +F + G
Sbjct: 128 VDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLE 187
Query: 62 YNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIW 121
N E++N ++D +C K VE+A+ V+L+LK + P+ + I G+C + EA +W
Sbjct: 188 KNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEA--LW 245
Query: 122 NL--MADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLV 175
+ M GF P V + ++ Q E +K++E L M+ G TY +
Sbjct: 246 TIQEMKGHGFRPCVISYTTIIRCYC---QQFEFIKVYEM--LSEMEANGSPPNSITYTTI 300
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI----VDRIG 231
+ + + +A +V M+ G + D+L +++ L R+ EA ++ + +G
Sbjct: 301 MSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELG 360
Query: 232 V-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRG-CEPTMHTYIMLLQGHLGRRGRKGT 289
V ++ S Y+ +I +A ++ +EM C P +HTY LL+ +RG
Sbjct: 361 VSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF-KRG---- 415
Query: 290 DPLVNFDTIFVGGLVK 305
D + VG L+K
Sbjct: 416 ------DVVEVGKLLK 425
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 152/329 (46%), Gaps = 21/329 (6%)
Query: 26 FATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKY 85
+ +T I + L + C++++ M N +L T + ++ +C V++A+
Sbjct: 252 YPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAES 311
Query: 86 VVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLF 144
V +L E D V Y ++ GFC G + E+ ++W +M + ++ + +++ L
Sbjct: 312 VFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLL 370
Query: 145 KVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDN 204
+ + EA ++ M K +TY + I +C G +++A V +E+ G +D
Sbjct: 371 ENGKIDEATMIWRLMPAKGY-AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDV 429
Query: 205 LTLGSVVYGLLAKHRVREAYQIVDRI---GV-MDISVYHGLIKGLLKLRRAGEATQVFRE 260
S++ L K R+ EA +V + GV ++ V + LI GL++ R GEA+ RE
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLRE 489
Query: 261 MIKRGCEPTMHTYIMLLQGHLGRRGR-------------KGTDPLVNFDTIFVGGLVKVG 307
M K GC PT+ +Y +L+ G L + G+ G P + +I + GL +
Sbjct: 490 MGKNGCRPTVVSYNILICG-LCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR 548
Query: 308 KAREYIKYVERVMNRGLEVPRFDYNKFLH 336
K ++ + + GLE +N +H
Sbjct: 549 KIDLALELWHQFLQSGLETDVMMHNILIH 577
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 39/289 (13%)
Query: 30 RTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAK-YVVL 88
R++ L A++ K +F + G NL+T N ++ C K E+A+ ++
Sbjct: 115 RSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDW 174
Query: 89 KLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQ 148
KE KPD Y +I G L +A ++++ M++ G PDV +++ K
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 149 GGEALKLFETM---------------------RLKRMD--------------ELGLSTYR 173
A++L++ + + R+D E L TY
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA---YQIVDRI 230
+I +C+ G + +A+ VF E+ ER ID +T +++ G +++E+ ++I++
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Query: 231 GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
++I Y+ LIKGLL+ + EAT ++R M +G TY + + G
Sbjct: 355 NSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHG 403
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 140/324 (43%), Gaps = 17/324 (5%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T+ + L A + K VF+ ++ ++ T N ++ C ++E+ + +
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 91 KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGG 150
+ + V Y LI+G + G + EA+ IW LM +G+ D + L
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVN 411
Query: 151 EALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSV 210
+AL + + + L + Y +I +C K + +A + +EM + G+++++ ++
Sbjct: 412 KALGVMQEVE-SSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470
Query: 211 VYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGC 266
+ GL+ R+ EA + +G + Y+ LI GL K + GEA+ +EM++ G
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530
Query: 267 EPTMHTYIMLLQGHLGRRG------------RKGTDPLVNFDTIFVGGLVKVGKAREYIK 314
+P + TY +LL G R + G + V I + GL VGK + +
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 315 YVERVMNRGLEVPRFDYNKFLHYF 338
+ + +R YN + F
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGF 614
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 129/318 (40%), Gaps = 43/318 (13%)
Query: 6 GKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLE 65
GK + W L+ A+ A T+ I + L + K + V + S+G ++
Sbjct: 373 GKIDEATMIWRLMP--AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVY 430
Query: 66 TLNKVVDAMCGYKLVEEAKYVVLKL----------------------------------- 90
++D +C K +EEA +V ++
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 91 -KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
K +P V Y LI G C G EAS M + G++PD++ ++ L + +
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
AL+L+ L+ E + + ++I +C+ G + A V M R + +T +
Sbjct: 551 DLALELWHQF-LQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609
Query: 210 VVYGLLA---KHRVREAYQIVDRIGVM-DISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
++ G +R + + ++G+ DI Y+ ++KGL R A + F + G
Sbjct: 610 LMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHG 669
Query: 266 CEPTMHTYIMLLQGHLGR 283
PT++T+ +L++ + R
Sbjct: 670 IFPTVYTWNILVRAVVNR 687
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 21/261 (8%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
V P+ Y LI+ C K + +A + M EGF+PDV + ++ L K + +AL
Sbjct: 145 VAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDAL 204
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL-TLGSVVY 212
+LF+ M +R ++ Y ++I + A ++++ + E N+ T ++
Sbjct: 205 ELFDEMS-ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 213 GLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEP 268
GL RV + +I +R+ D+ Y LI GL +A VF E+ +R
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 269 TMHTYIMLLQGHLGRRGR-------------KGTDPLVNFDTIFVGGLVKVGKAREYIKY 315
+ TY +L G R G+ K + +V+++ I + GL++ GK E
Sbjct: 324 DVVTYNTMLGG-FCRCGKIKESLELWRIMEHKNSVNIVSYN-ILIKGLLENGKIDEATMI 381
Query: 316 VERVMNRGLEVPRFDYNKFLH 336
+ +G + Y F+H
Sbjct: 382 WRLMPAKGYAADKTTYGIFIH 402
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 111/230 (48%), Gaps = 6/230 (2%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGD 113
M G+ N T V++ MC A ++ K++E +K D V Y +I G C G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 114 LIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYR 173
L A ++N M +GF+ D+ ++ + + KL M +KR + T+
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM-IKRKISPNVVTFS 337
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI--- 230
++I +G + +A ++ +EM +RGI + +T S++ G ++R+ EA Q+VD +
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 231 -GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
DI ++ LI G K R + ++FREM RG TY L+QG
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 152/356 (42%), Gaps = 44/356 (12%)
Query: 11 IDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
+DLF ++ I R T F + ++ + + + M S G +++ TL+ +
Sbjct: 73 VDLFRDM---IQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 71 VDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
++ C + + A + K +K +PD V + L+ G C + + EA ++ + M + G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMM 185
+P + + ++ L + +A+ L + RM E G TY V+ MC G
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLID-----RMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 186 SQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGL 241
+ A ++ +M ER I++D + ++ GL + A+ + + + + DI Y+ L
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 242 IKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVG 301
I G R + ++ R+MIKR P + T+ ++ +
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF-----------------------SVLID 341
Query: 302 GLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEMGKK 353
VK GK RE + ++ +M RG+ YN + F EE + M + M K
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 151/372 (40%), Gaps = 23/372 (6%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFA-TDRTFVIALRTLGGARELKKCVEVFHLMNSNG 59
+ + K++ +L L + + A + T I + R+L + G
Sbjct: 94 LFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLG 153
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEAS 118
Y + N +++ +C V EA +V ++ E KP + L+ G C G + +A
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
+ + M + GF+P+ ++ + K Q A++L M +R +L Y ++I
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIIIDG 272
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI----VDRIGVMD 234
+C G + A +F EM +G + D +T +++ G R + ++ + R +
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 235 ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG--------- 285
+ + LI +K + EA Q+ +EM++RG P TY L+ G
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 286 ---RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN-- 340
KG DP + I + G K + + ++ + RG+ YN + F
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 341 --EEGVLMFEEM 350
E +F+EM
Sbjct: 453 KLEVAKKLFQEM 464
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 135/273 (49%), Gaps = 7/273 (2%)
Query: 16 ELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAM 74
+LL D+ +R+ + + TF + + + +L++ ++ M G N T N ++D
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 75 CGYKLVEEA-KYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDV 133
C +EEA + V L + + PD + + LI G+C + + +++ M+ G +
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 134 EAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFE 193
+++ + + A KLF+ M +R+ + +Y++++ +C+ G + +A ++F
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP-DIVSYKILLDGLCDNGELEKALEIFG 497
Query: 194 EMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLR 249
++ + +++D +++G+ +V +A+ + + + +D Y+ +I L +
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD 557
Query: 250 RAGEATQVFREMIKRGCEPTMHTYIMLLQGHLG 282
+A +FR+M + G P TY +L++ HLG
Sbjct: 558 SLSKADILFRKMTEEGHAPDELTYNILIRAHLG 590
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 146/340 (42%), Gaps = 48/340 (14%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRT-FVIALRTLGGARELKKCVEVFHLMNSNG 59
+L+V+ KS L ELL + R D + I + L L +F+ M G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 60 YGYNLETLNKVVDAMC-------GYKLVEE----------AKYVVL--------KLKEW- 93
+ ++ T N ++ C G KL+ + + VL KL+E
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 94 ----------VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETL 143
+ P+ + Y LI GFC + L EA ++ +LM +G +PD+ ++
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 144 FKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
K N+ + L+LF M L+ + TY +++ C G + A+K+F+EM R ++ D
Sbjct: 414 CKANRIDDGLELFREMSLRGVIA-NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 204 NLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQVFR 259
++ ++ GL + +A +I +I +DI +Y +I G+ + +A +F
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 260 EMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIF 299
+ +G + Y +++ L R+ D L D +F
Sbjct: 533 SLPLKGVKLDARAYNIMIS-ELCRK-----DSLSKADILF 566
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 2/234 (0%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
TF I + A + +E+F M+ G N T N +V C +E AK + ++
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 91 -KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
V+PD V YK L+ G CD G+L +A +I+ + E D+ ++ + ++
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
+A LF ++ LK + +L Y ++I +C K +S+A +F +M E G D LT
Sbjct: 525 DDAWDLFCSLPLKGV-KLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNI 583
Query: 210 VVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIK 263
++ L A ++++ + +K ++ + +GE + F +M+
Sbjct: 584 LIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLS 637
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 131/290 (45%), Gaps = 18/290 (6%)
Query: 64 LETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNL 123
+ N ++DA+C LV+E + ++ +++ VKPD + L G+C D +A K+
Sbjct: 234 INAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEE 293
Query: 124 MADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLK--RMDELGLSTYRLVIKWMCN 181
M + G +P+ ++T + EA LF+ M K + T+ L+I +
Sbjct: 294 MIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAK 353
Query: 182 KGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDISV 237
+ ++ M G D T V+ G+ +V EAY+ +D + DI
Sbjct: 354 NDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVT 413
Query: 238 YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGT-------- 289
Y+ ++ L + R+ EA +++ M++ C P++ TY ML+ G
Sbjct: 414 YNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMD 473
Query: 290 --DPLVNFDT--IFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFL 335
D + + +T + GL +A+E +E V+N+GL++P ++ FL
Sbjct: 474 KRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 8/218 (3%)
Query: 12 DLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVV 71
DLF +++ + T +TF + + L + ++C E+ M S G ++ T V+
Sbjct: 324 DLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVI 383
Query: 72 DAMCGYKLVEEA-KYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFE 130
+ MC + V+EA K++ + PD V Y +R C+ EA K++ M +
Sbjct: 384 EGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCA 443
Query: 131 PDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQK 190
P V+ ++ F+++ A + M KR + TY +I + + +A
Sbjct: 444 PSVQTYNMLISMFFEMDDPDGAFNTWTEMD-KRDCVQDVETYCAMINGLFDCHRAKEACF 502
Query: 191 VFEEMRERGIQIDNLTLGSV------VYGLLAKHRVRE 222
+ EE+ +G+++ S V L A H+V E
Sbjct: 503 LLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSE 540
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 155/343 (45%), Gaps = 18/343 (5%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRR-FATDRTFVIALRTLGGARELKKCVEVFHLMNSNG 59
+LDV+GK R + F ++ ++++R F ++T+ + L A ++ + V VF G
Sbjct: 149 ILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFG 208
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASK 119
+L + ++ +C YK VE A+ + + D ++ G+C G++ EA +
Sbjct: 209 IDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKR 268
Query: 120 IWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWM 179
W + PDV + M+ L K + G+A++L+ M R + + VI +
Sbjct: 269 FWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNP-DVKICNNVIDAL 327
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM--DISV 237
C K + +A +VF E+ E+G + +T S++ L R + +++V+ + + S
Sbjct: 328 CFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSP 387
Query: 238 YHGLIKGLLKL-RRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL------------GRR 284
LLK +R+ + V M K CE T Y ++ + ++
Sbjct: 388 NDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEM 447
Query: 285 GRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVP 327
R G P TI + GL GK E + Y + +M++G+ VP
Sbjct: 448 ERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGM-VP 489
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 31/257 (12%)
Query: 34 IALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC-------GYKLVEEAKYV 86
IALR RE+++C ++ N Y TLN V+ C G +L+++ + +
Sbjct: 221 IALRFY---REMRRCK-----ISPNPY-----TLNMVMSGYCRSGKLDKGIELLQDMERL 267
Query: 87 VLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKV 146
+ + V Y LI G C+KG L A K+ N+M G +P+V ++ +
Sbjct: 268 GFRATD------VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRA 321
Query: 147 NQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLT 206
+ EA K+F M+ + TY +I +G A + +E+M GIQ D LT
Sbjct: 322 MKLQEASKVFGEMKAVNVAP-NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 207 LGSVVYGLLAKHRVREAYQIVDRIG----VMDISVYHGLIKGLLKLRRAGEATQVFREMI 262
++++GL + + R+A Q V + V + S + LI G + A ++++ MI
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 263 KRGCEPTMHTYIMLLQG 279
+ GC P T+ ML+
Sbjct: 441 RSGCHPNEQTFNMLVSA 457
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 31/257 (12%)
Query: 34 IALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC-------GYKLVEEAKYV 86
IALR RE+++C ++ N Y TLN V+ C G +L+++ + +
Sbjct: 221 IALRFY---REMRRCK-----ISPNPY-----TLNMVMSGYCRSGKLDKGIELLQDMERL 267
Query: 87 VLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKV 146
+ + V Y LI G C+KG L A K+ N+M G +P+V ++ +
Sbjct: 268 GFRATD------VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRA 321
Query: 147 NQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLT 206
+ EA K+F M+ + TY +I +G A + +E+M GIQ D LT
Sbjct: 322 MKLQEASKVFGEMKAVNVAP-NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 207 LGSVVYGLLAKHRVREAYQIVDRIG----VMDISVYHGLIKGLLKLRRAGEATQVFREMI 262
++++GL + + R+A Q V + V + S + LI G + A ++++ MI
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 263 KRGCEPTMHTYIMLLQG 279
+ GC P T+ ML+
Sbjct: 441 RSGCHPNEQTFNMLVSA 457
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 133/326 (40%), Gaps = 47/326 (14%)
Query: 51 VFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFC 109
+F M G N+ T N ++D C + +A+ ++ + E + PD + + LI
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 110 DKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETM---------- 159
+G L EA K+ + M PD M+ K N+ +A +F+ M
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT 437
Query: 160 ------RLKRMDE--------------LGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERG 199
R KR+DE +TY +I C ++ AQ +F+EM G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 200 IQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEAT 255
+ D +T ++YG ++ EA ++ + I + +D Y+ +I G+ K + EA
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 256 QVFREMIKRGCEPTMHTYIMLLQGHLGRRG------------RKGTDPLVNFDTIFVGGL 303
+F + G EP + TY +++ G G+ G +P + + G
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 304 VKVGKAREYIKYVERVMNRGLEVPRF 329
+K G+ + I+ + + + G F
Sbjct: 618 LKAGEIDKSIELISEMRSNGFSGDAF 643
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 2/226 (0%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGD 113
M G ++ T +V+ MC + A ++ K++E +KPD V Y +I C G
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 114 LIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYR 173
+A +++ M ++G P+V M++ + +A +L M ++R + T+
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM-IEREINPDVLTFN 370
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM 233
+I +G + +A+K+ +EM R I D +T S++YG +R +A + D +
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP 430
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
D+ ++ +I + +R E Q+ RE+ +RG TY L+ G
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 127/297 (42%), Gaps = 46/297 (15%)
Query: 63 NLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIW 121
N+ + N ++ C + + KL K +PD V + L+ G C + + EA ++
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIK 177
M + GF EA+ LF+ +M E+GL+ T+ +I
Sbjct: 200 GYMVETGFL--------------------EAVALFD-----QMVEIGLTPVVITFNTLIN 234
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM---- 233
+C +G + +A + +M +G+ ID +T G++V G+ + A ++ ++
Sbjct: 235 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 294
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLG--------RRG 285
D+ +Y +I L K +A +F EM+++G P + TY ++ G R
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 286 RKGTDPLVNFDTIFVGGL----VKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYF 338
R + +N D + L VK GK E K + +++R + YN ++ F
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 132/304 (43%), Gaps = 35/304 (11%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRF-ATDRTFVIALRTLGGARELKKCVEVFHLMNSNG 59
++DV +++ +D +LL +I+RR A T+ + L ++F M S+G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAK--YVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEA 117
+ T N ++ C + +EEA + V+++ + + D V Y +I G C + EA
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSK-IDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
++ + G EPDV+ M+ + +A LF M+ E STY +I+
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK-DNGHEPDNSTYNTLIR 615
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISV 237
G + ++ ++ EMR G D T ++ A +I+ R+ +I
Sbjct: 616 GCLKAGEIDKSIELISEMRSNGFSGDAFT-------------IKMAEEIICRVSDEEI-- 660
Query: 238 YHGLIKGLLKLRRAGEATQVFREMIKRG-----CEPTM---HTYIMLLQG---HLGRRGR 286
I+ L+ + GE + + R +++ EP + T +L G + G+R R
Sbjct: 661 ----IENYLRPKINGETSSIPRYVVELAEELYTVEPWLLPRQTAPILNPGEWFYFGKRNR 716
Query: 287 KGTD 290
K ++
Sbjct: 717 KYSN 720
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 34/243 (13%)
Query: 131 PDVEAVE--KMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQA 188
P AV+ K++ ++N+ A+ L+ M ++R+ L + ++ ++IK C+ +S +
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRI-PLNIYSFNILIKCFCDCHKLSFS 160
Query: 189 QKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI---------VDRIGVMD----- 234
F ++ + G Q D +T ++++GL + R+ EA + ++ + + D
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI 220
Query: 235 -----ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH--------- 280
+ ++ LI GL R EA + +M+ +G + TY ++ G
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 281 ---LGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHY 337
L + P V + + L K G + ++ +G+ F YN +
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 338 FSN 340
F +
Sbjct: 341 FCS 343
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 158/386 (40%), Gaps = 37/386 (9%)
Query: 8 SRNIDLFWELLSDI-----ARRRF----------ATDRTFVIALRTLGGARELKKCVEVF 52
R D+F+++L D ARR F + D V R + + VF
Sbjct: 175 PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVF 234
Query: 53 HLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVL--KLKEWVKPDGVCYKHLIRGFCD 110
G +N+ + N V+ +C ++EA +++L +LK + PD + Y ++ G+C
Sbjct: 235 REFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYT-PDVISYSTVVNGYCR 293
Query: 111 KGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS 170
G+L + K+ +M +G +P+ ++ L ++ + EA + F M +++
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPDTV 352
Query: 171 TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI 230
Y +I C +G + A K F EM R I D LT +++ G + EA ++ +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 231 GV----MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG- 285
D + LI G K +A +V MI+ GC P + TY L+ G L + G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG-LCKEGD 471
Query: 286 ------------RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNK 333
+ G P + V GL K G E +K V GL Y
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 334 FLHYFSNEEGVLMFEEMGKKLREVGL 359
+ + + +E+ K++ GL
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 39/275 (14%)
Query: 44 ELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGY-KLVEEAKYVVLKLKEWVKPDGVCYK 102
EL K ++ +M G N ++ +C KL E + +++ + PD V Y
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 103 HLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLK 162
LI GFC +GD+ ASK + M PDV ++ ++ EA KLF M K
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 163 ------------------------------RMDELGLS----TYRLVIKWMCNKGMMSQA 188
M + G S TY +I +C +G + A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 189 QKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKG 244
++ EM + G+Q + T S+V GL + EA ++V D Y L+
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 245 LLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
K +A ++ +EM+ +G +PT+ T+ +L+ G
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 118/259 (45%), Gaps = 6/259 (2%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
TF + A +K V + M G N+ T ++D +C ++ A ++ ++
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 91 -KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
K ++P+ Y ++ G C G++ EA K+ G D +M+ K +
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
+A ++ + M K + + + T+ +++ C GM+ +K+ M +GI + T S
Sbjct: 543 DKAQEILKEMLGKGL-QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 210 VVYGLLAKHRVREAYQIVDRI---GV-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
+V ++ ++ A I + GV D Y L+KG K R EA +F+EM +G
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 266 CEPTMHTYIMLLQGHLGRR 284
++ TY +L++G L R+
Sbjct: 662 FSVSVSTYSVLIKGFLKRK 680
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 114/246 (46%), Gaps = 12/246 (4%)
Query: 50 EVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGF 108
++FH M G + T ++++ C +++A V + + P+ V Y LI G
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 109 CDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKL---FETMRLKRMD 165
C +GDL A+++ + M G +P++ ++ L K EA+KL FE L
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-- 524
Query: 166 ELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQ 225
TY ++ C G M +AQ++ +EM +G+Q +T ++ G + + +
Sbjct: 525 --DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 226 IVDRI---GVM-DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL 281
+++ + G+ + + ++ L+K AT ++++M RG P TY L++GH
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 282 GRRGRK 287
R K
Sbjct: 643 KARNMK 648
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 107/235 (45%), Gaps = 9/235 (3%)
Query: 1 MLDVVGKSRNIDLFWELLSDIAR----RRFATDRTFVIALRTLGGARELKKCVEVFHLMN 56
++D + K ++D ELL ++ + T + V L G E K V F
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE--- 518
Query: 57 SNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLI 115
+ G + T ++DA C +++A+ ++ + L + ++P V + L+ GFC G L
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLV 175
+ K+ N M +G P+ +++ N A +++ M + + G TY +
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG-KTYENL 637
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI 230
+K C M +A +F+EM+ +G + T ++ G L + + EA ++ D++
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 158/386 (40%), Gaps = 37/386 (9%)
Query: 8 SRNIDLFWELLSDI-----ARRRF----------ATDRTFVIALRTLGGARELKKCVEVF 52
R D+F+++L D ARR F + D V R + + VF
Sbjct: 175 PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVF 234
Query: 53 HLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVL--KLKEWVKPDGVCYKHLIRGFCD 110
G +N+ + N V+ +C ++EA +++L +LK + PD + Y ++ G+C
Sbjct: 235 REFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYT-PDVISYSTVVNGYCR 293
Query: 111 KGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS 170
G+L + K+ +M +G +P+ ++ L ++ + EA + F M +++
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPDTV 352
Query: 171 TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI 230
Y +I C +G + A K F EM R I D LT +++ G + EA ++ +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 231 GV----MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG- 285
D + LI G K +A +V MI+ GC P + TY L+ G L + G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG-LCKEGD 471
Query: 286 ------------RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNK 333
+ G P + V GL K G E +K V GL Y
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 334 FLHYFSNEEGVLMFEEMGKKLREVGL 359
+ + + +E+ K++ GL
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 39/275 (14%)
Query: 44 ELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGY-KLVEEAKYVVLKLKEWVKPDGVCYK 102
EL K ++ +M G N ++ +C KL E + +++ + PD V Y
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 103 HLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLK 162
LI GFC +GD+ ASK + M PDV ++ ++ EA KLF M K
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 163 ------------------------------RMDELGLS----TYRLVIKWMCNKGMMSQA 188
M + G S TY +I +C +G + A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 189 QKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKG 244
++ EM + G+Q + T S+V GL + EA ++V D Y L+
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 245 LLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
K +A ++ +EM+ +G +PT+ T+ +L+ G
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 118/259 (45%), Gaps = 6/259 (2%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
TF + A +K V + M G N+ T ++D +C ++ A ++ ++
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 91 -KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
K ++P+ Y ++ G C G++ EA K+ G D +M+ K +
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
+A ++ + M K + + + T+ +++ C GM+ +K+ M +GI + T S
Sbjct: 543 DKAQEILKEMLGKGL-QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 210 VVYGLLAKHRVREAYQIVDRI---GV-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
+V ++ ++ A I + GV D Y L+KG K R EA +F+EM +G
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 266 CEPTMHTYIMLLQGHLGRR 284
++ TY +L++G L R+
Sbjct: 662 FSVSVSTYSVLIKGFLKRK 680
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 114/246 (46%), Gaps = 12/246 (4%)
Query: 50 EVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGF 108
++FH M G + T ++++ C +++A V + + P+ V Y LI G
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 109 CDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKL---FETMRLKRMD 165
C +GDL A+++ + M G +P++ ++ L K EA+KL FE L
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-- 524
Query: 166 ELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQ 225
TY ++ C G M +AQ++ +EM +G+Q +T ++ G + + +
Sbjct: 525 --DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 226 IVDRI---GVM-DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL 281
+++ + G+ + + ++ L+K AT ++++M RG P TY L++GH
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 282 GRRGRK 287
R K
Sbjct: 643 KARNMK 648
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 107/235 (45%), Gaps = 9/235 (3%)
Query: 1 MLDVVGKSRNIDLFWELLSDIAR----RRFATDRTFVIALRTLGGARELKKCVEVFHLMN 56
++D + K ++D ELL ++ + T + V L G E K V F
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE--- 518
Query: 57 SNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLI 115
+ G + T ++DA C +++A+ ++ + L + ++P V + L+ GFC G L
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLV 175
+ K+ N M +G P+ +++ N A +++ M + + G TY +
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG-KTYENL 637
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI 230
+K C M +A +F+EM+ +G + T ++ G L + + EA ++ D++
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 133/290 (45%), Gaps = 6/290 (2%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATD-RTFVIALRTLGGARELKKCVEVFHLMNSNG 59
M+D+ GK R DL W L+ + R TF I +R A + V F+ M G
Sbjct: 157 MIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYG 216
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASK 119
+ + V+ + + EA+ LK+ +PD + Y +L+RG+C G++ EA K
Sbjct: 217 CVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEK 276
Query: 120 IWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWM 179
++ M G EP+V +++ L + Q A +F M L T+ +++
Sbjct: 277 VFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADM-LDSGCAPNAITFNNLMRVH 335
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI----GVMDI 235
G + +V+ +M++ G + D +T ++ + A ++++ + ++
Sbjct: 336 VKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNA 395
Query: 236 SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG 285
S ++ + + + K R A +++ +M++ CEP TY +L++ +G +
Sbjct: 396 STFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKS 445
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 133/326 (40%), Gaps = 47/326 (14%)
Query: 51 VFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFC 109
+F M G N+ T N ++D C + +A+ ++ + E + PD + + LI
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 110 DKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETM---------- 159
+G L EA K+ + M PD M+ K N+ +A +F+ M
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT 437
Query: 160 ------RLKRMDE--------------LGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERG 199
R KR+DE +TY +I C ++ AQ +F+EM G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 200 IQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEAT 255
+ D +T ++YG ++ EA ++ + I + +D Y+ +I G+ K + EA
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 256 QVFREMIKRGCEPTMHTYIMLLQGHLGRRG------------RKGTDPLVNFDTIFVGGL 303
+F + G EP + TY +++ G G+ G +P + + G
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 304 VKVGKAREYIKYVERVMNRGLEVPRF 329
+K G+ + I+ + + + G F
Sbjct: 618 LKAGEIDKSIELISEMRSNGFSGDAF 643
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 2/226 (0%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGD 113
M G ++ T +V+ MC + A ++ K++E +KPD V Y +I C G
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 114 LIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYR 173
+A +++ M ++G P+V M++ + +A +L M ++R + T+
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM-IEREINPDVLTFN 370
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM 233
+I +G + +A+K+ +EM R I D +T S++YG +R +A + D +
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP 430
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
D+ ++ +I + +R E Q+ RE+ +RG TY L+ G
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 127/297 (42%), Gaps = 46/297 (15%)
Query: 63 NLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIW 121
N+ + N ++ C + + KL K +PD V + L+ G C + + EA ++
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIK 177
M + GF EA+ LF+ +M E+GL+ T+ +I
Sbjct: 200 GYMVETGFL--------------------EAVALFD-----QMVEIGLTPVVITFNTLIN 234
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM---- 233
+C +G + +A + +M +G+ ID +T G++V G+ + A ++ ++
Sbjct: 235 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 294
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLG--------RRG 285
D+ +Y +I L K +A +F EM+++G P + TY ++ G R
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 286 RKGTDPLVNFDTI----FVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYF 338
R + +N D + + VK GK E K + +++R + YN ++ F
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 6/228 (2%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRF-ATDRTFVIALRTLGGARELKKCVEVFHLMNSNG 59
++DV +++ +D +LL +I+RR A T+ + L ++F M S+G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAK--YVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEA 117
+ T N ++ C + +EEA + V+++ + + D V Y +I G C + EA
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSK-IDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
++ + G EPDV+ M+ + +A LF M+ E STY +I+
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK-DNGHEPDNSTYNTLIR 615
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQ 225
G + ++ ++ EMR G D T+ +V L+ R+ +++
Sbjct: 616 GCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLDKSFS 662
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 11/186 (5%)
Query: 12 DLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
DLF E++S D T I L +L++ +E+F ++ + + N +
Sbjct: 488 DLFQEMIS----HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 71 VDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
+ MC V+EA + L V+PD Y +I GFC K + +A+ +++ M D G
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQ 189
EPD ++ K + ++++L MR G S IK + + +
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN-----GFSGDAFTIKMVADLITDGRLD 658
Query: 190 KVFEEM 195
K F +M
Sbjct: 659 KSFSDM 664
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 35/205 (17%)
Query: 131 PDVEAVE--KMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQA 188
P AV+ K++ ++N+ A+ L+ M ++R+ L + ++ ++IK C+ +S +
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRI-PLNIYSFNILIKCFCDCHKLSFS 160
Query: 189 QKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKL 248
F ++ + G Q D +T ++++GL + R+ EA + G M V G +
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALAL---FGYM---VETGFL------ 208
Query: 249 RRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR-------------KGTD-PLVN 294
EA +F +M++ G P + T+ L+ G L GR KG +V
Sbjct: 209 ----EAVALFDQMVEIGLTPVVITFNTLING-LCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 295 FDTIFVGGLVKVGKAREYIKYVERV 319
+ TI V G+ K+G + + + ++
Sbjct: 264 YGTI-VNGMCKMGDTKSALNLLSKM 287
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 139/302 (46%), Gaps = 26/302 (8%)
Query: 27 ATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYV 86
+ RT+ + ++ L + K +F M G N+ T ++D +C +EEA V
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 87 VLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFK 145
K+ K+ + P + Y LI G+C G ++ A ++ +M +P+V ++ME L +
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 146 VNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQ 201
V + +A+ L LKRM + GLS +Y ++I +C +G M+ A K+ M I+
Sbjct: 419 VGKPYKAVHL-----LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE 473
Query: 202 IDNLTLGSVVYGLL--AKHRVREAY-QIVDRIGV-MDISVYHGLIKGLLKLRRAGEATQV 257
D LT +++ K V A+ ++ R G+ +D LI G+ K+ + +A +
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFI 533
Query: 258 FREMIKRGCEPTMHTYIMLLQ------------GHLGRRGRKGTDPLVNFDTIFVGGLVK 305
++K T H+ ++L LG+ + G P V T V GL++
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Query: 306 VG 307
G
Sbjct: 594 SG 595
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 133/316 (42%), Gaps = 42/316 (13%)
Query: 15 WELLSDIARRRFATD-RTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDA 73
+ELL+ + +R + RTF + L + K V + M NG ++ + N ++D
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 74 MCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPD 132
+C + A ++ + + ++PD + + +I FC +G AS LM +G D
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 133 VEAVEKMMETLFKVNQGGEALKLFETM------------------------------RLK 162
+++ + KV + +AL + ET+ L
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570
Query: 163 RMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKH 218
++++LGL TY ++ + G ++ + ++ E M+ G + ++ GL
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 219 RVREAYQIVDRIGVMDIS----VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYI 274
RV EA +++ + +S Y ++KG + + A + R M++RG E Y
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYS 690
Query: 275 MLLQGHLGRRGRKGTD 290
LLQG + +KG D
Sbjct: 691 SLLQGFV--LSQKGID 704
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 154/369 (41%), Gaps = 32/369 (8%)
Query: 17 LLSDIARRRFATDRTFVIALRTLGGAR--ELKKCVEVFHLMNSN-GYGYNLETLNKVVDA 73
+S I + F D +L LG R L+ ++VF +M+ N + + ++
Sbjct: 217 FMSKILKIGFVLDSHIGTSL-LLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHG 275
Query: 74 MCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPD 132
+C +EEA + ++ E +P Y LI+ CD+G + +A +++ M G +P+
Sbjct: 276 LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPN 335
Query: 133 VEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVF 192
V +++ L + + EA + M R+ + TY +I C G + A ++
Sbjct: 336 VHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFP-SVITYNALINGYCKDGRVVPAFELL 394
Query: 193 EEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM-------DISVYHGLIKGL 245
M +R + + T ++ GL RV + Y+ V + M DI Y+ LI GL
Sbjct: 395 TVMEKRACKPNVRTFNELMEGLC---RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Query: 246 LKLRRAGEATQVFREMIKRGCEPTMHTYIMLL------------QGHLGRRGRKGTDPLV 293
+ A ++ M EP T+ ++ LG RKG
Sbjct: 452 CREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511
Query: 294 NFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGK- 352
T + G+ KVGK R+ + +E ++ + N L S +G + EE+
Sbjct: 512 VTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLS--KGCKVKEELAML 569
Query: 353 -KLREVGLV 360
K+ ++GLV
Sbjct: 570 GKINKLGLV 578
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 128 GFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQ 187
GF + ++ +L K++ G A + M +G+ YR ++ +C G
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGF-VVGMIDYRTIVNALCKNGYTEA 213
Query: 188 AQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD----RIGVMDISV-YHGLI 242
A+ ++ + G +D+ S++ G +R+A ++ D + SV Y LI
Sbjct: 214 AEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILI 273
Query: 243 KGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG-------------RKGT 289
GL ++ R EA + +M ++GC+P+ TY +L++ L RG +G
Sbjct: 274 HGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKA-LCDRGLIDKAFNLFDEMIPRGC 332
Query: 290 DPLVNFDTIFVGGLVKVGKARE 311
P V+ T+ + GL + GK E
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEE 354
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 32/228 (14%)
Query: 65 ETLNKVVDAMC-GYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNL 123
+LN ++D + G K+ EE + K + P V Y L+ G GD+ + +I L
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILEL 606
Query: 124 MADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWM 179
M G P+V ++ L + + EA KL L M + G+S TY +++K
Sbjct: 607 MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKL-----LSAMQDSGVSPNHVTYTVMVKGY 661
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHR-------------------- 219
N G + +A + M ERG ++++ S++ G + +
Sbjct: 662 VNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDP 721
Query: 220 --VREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
+ E +V+++G + L+ L K R E+ + + +++RG
Sbjct: 722 ECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERG 769
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 123/295 (41%), Gaps = 19/295 (6%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEA 117
GY + T +V + + EA +V ++ + +PD V Y +I G C +G+ A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
+ N M E DV +++ L K +A LF M K + + TY +I
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP-DVFTYNPLIS 293
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI-----GV 232
+CN G S A ++ +M E+ I D + +++ + + ++ EA ++ D +
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 233 MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG------- 285
D+ Y+ LIKG K +R E +VFREM +RG TY L+ G R
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 286 -----RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFL 335
G P + I + GL G + E + R +++ Y +
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 148/347 (42%), Gaps = 24/347 (6%)
Query: 11 IDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
I LF ++ + R F + F L + + + + M + G +NL T +
Sbjct: 60 IGLFGDM---VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 71 VDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
++ C + A ++ K+ K P V L+ GFC + EA + + M + G+
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQ 189
+PD ++ LF+ N+ EA+ L E M +K + L TY VI +C +G A
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC-QPDLVTYGAVINGLCKRGEPDLAL 235
Query: 190 KVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GV-MDISVYHGLIKGL 245
+ +M + I+ D + +++ GL + +A+ + +++ G+ D+ Y+ LI L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 246 LKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGR--------------RGRKGTDP 291
R +A+++ +M+++ P + + L+ + + +
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 292 LVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYF 338
+V ++T+ + G K + E ++ + RGL Y +H F
Sbjct: 356 VVAYNTL-IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 130/287 (45%), Gaps = 17/287 (5%)
Query: 12 DLFWELLSDIARRRFATDRT-FVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
DL LL+ + + + D + + L + + ++F+ M + G ++ T N +
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 71 VDAMCGY-KLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMA-DEG 128
+ +C Y + + ++ + L++ + PD V + LI F +G L+EA K+++ M +
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGM 184
PDV A +++ K + E +++F + M + GL TY +I
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVF-----REMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 185 MSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD----RIGVMDISVYHG 240
AQ VF++M G+ D +T ++ GL V A + + R +DI Y
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 241 LIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRK 287
+I+ L K + + +F + +G +P + TY ++ G R+G K
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG-FCRKGLK 512
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T+ + AR+ VF M S+G ++ T N ++D +C VE A V +
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 91 -KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
K +K D V Y +I C G + + ++ ++ +G +P+V MM +
Sbjct: 453 QKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 512
Query: 150 GEALKLFETMRLKRMDELGLS-TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLG 208
EA LF + +K L S TY +I+ G + + ++ +EMR G D T G
Sbjct: 513 EEADALF--VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570
Query: 209 SVVYGLLAKHRVREAY 224
+V +L R+ +++
Sbjct: 571 -LVTNMLHDGRLDKSF 585
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 164/372 (44%), Gaps = 26/372 (6%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRTFVIAL--RTLGGARELKKCVEVFHLMNSN 58
+L+V+ +++ DL + + T F L + L +++ +V + S
Sbjct: 161 LLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSM 220
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL--KEWVKPDGVCYKHLIRGFCDKGDLIE 116
G NL T ++ +E AK V+ ++ + W PD Y L+ G+C G E
Sbjct: 221 GLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWY-PDATTYTVLMDGYCKLGRFSE 279
Query: 117 ASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVI 176
A+ + + M EP+ M+ L K + GEA +F+ M L+R S VI
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM-LERSFMPDSSLCCKVI 338
Query: 177 KWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GVM 233
+C + +A ++ +M + DN L ++++ L + RV EA ++ D +
Sbjct: 339 DALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIP 398
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRK------ 287
+ Y+ LI G+ + EA +++ +M +R C+P TY +L++G L + G
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEG-LSKNGNVKEGVRV 457
Query: 288 -------GTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN 340
G P I GL K+GK + +K V + G +V + + FL F+
Sbjct: 458 LEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG-KVDKESWELFLKKFAG 516
Query: 341 E--EGVLMFEEM 350
E +GVL +E+
Sbjct: 517 ELDKGVLPLKEL 528
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 20/299 (6%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEA-KYVVLKLKEWVKPDGVCYKHLIRGFCDKGD 113
M S G+ N + V+ +C + + + A ++V L + P G LI G C G
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485
Query: 114 LIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYR 173
+A ++W ++GF D ++ L + + EA ++ + + L R + +Y
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI-LGRGCVMDRVSYN 544
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD---RI 230
+I C K + +A +EM +RG++ DN T ++ GL ++V EA Q D R
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 604
Query: 231 GVM-DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR--- 286
G++ D+ Y +I G K R E + F EM+ + +P Y L++ + R GR
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC-RSGRLSM 663
Query: 287 ----------KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFL 335
KG P T + G+ + + E E + GLE F Y +
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 137/318 (43%), Gaps = 20/318 (6%)
Query: 46 KKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHL 104
K +E++ + G+ + T N ++ +C ++EA + + L D V Y L
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 105 IRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRM 164
I G C K L EA + M G +PD ++ LF +N+ EA++ ++ + M
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 606
Query: 165 DELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY 224
+ TY ++I C + Q+ F+EM + +Q + + ++ R+ A
Sbjct: 607 LP-DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 225 QIVDRIGVMDIS----VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
++ + + IS Y LIKG+ + R EA +F EM G EP + Y L+ G+
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 281 LGRRGR-------------KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVP 327
G+ G+ K P T+ +GG + G E + + + +G+
Sbjct: 726 -GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Query: 328 RFDYNKFLHYFSNEEGVL 345
Y +F++ + + GVL
Sbjct: 785 SITYKEFIYGYLKQGGVL 802
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 156/381 (40%), Gaps = 63/381 (16%)
Query: 32 FVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDA--MCGYKLVEEAKYVVLK 89
F A+ ++++ V++F M G N+ T N V+D MCG +EA K
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR--YDEAFMFKEK 320
Query: 90 LKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQ 148
+ E ++P + Y L++G + +A + M +GF P+V ++++ +
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 149 GGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLG 208
+A+++ + M K + L STY +IK C G A+++ +EM G ++ +
Sbjct: 381 LNKAIEIKDLMVSKGLS-LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
Query: 209 SVVYGLLAKHRVREA----------------------------------------YQIVD 228
SV+ LL H + ++ +Q ++
Sbjct: 440 SVI-CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 229 RIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG--- 285
+ V+D + L+ GL + + EA ++ +E++ RGC +Y L+ G G++
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 286 ---------RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLH 336
++G P +I + GL + K E I++ + G+ + Y+ +
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 337 YFS----NEEGVLMFEEMGKK 353
EEG F+EM K
Sbjct: 619 GCCKAERTEEGQEFFDEMMSK 639
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 133/327 (40%), Gaps = 52/327 (15%)
Query: 26 FATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKY 85
F + T I L +L A E +KC E F D +C
Sbjct: 223 FPSKTTCNILLTSLVRANEFQKCCEAF-------------------DVVC---------- 253
Query: 86 VVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFK 145
+ V PD + I FC G + EA K+++ M + G P+V +++ L
Sbjct: 254 ------KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 307
Query: 146 VNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL 205
+ EA E M ++R E L TY +++K + + A V +EM ++G + +
Sbjct: 308 CGRYDEAFMFKEKM-VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI 366
Query: 206 TLGSVVYGLLAKHRVREAYQIVDRI---GV-MDISVYHGLIKGLLKLRRAGEATQVFREM 261
+++ + + +A +I D + G+ + S Y+ LIKG K +A A ++ +EM
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 262 IKRGC---EPTMHTYIMLLQGHL---------GRRGRKGTDPLVNFDTIFVGGLVKVGKA 309
+ G + + + I LL HL G + P T + GL K GK
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 486
Query: 310 REYIKYVERVMNRGLEVPRFDYNKFLH 336
+ ++ + +N+G V N LH
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLH 513
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 123/276 (44%), Gaps = 42/276 (15%)
Query: 9 RNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETL 67
+ +D + L ++ +R D T+ I + L ++++ ++ + NG ++ T
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 68 NKVVDAMCGYKLVEEAK-YVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD 126
+ ++D C + EE + + + + V+P+ V Y HLIR +C G L A ++ M
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 127 EGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMD--------------ELGLS-- 170
+G P+ +++ + +++ EA LFE MR++ ++ +LG
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 171 ------------------TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVY 212
TY ++I G +++A ++ EMRE+GI D++T +Y
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Query: 213 GLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKL 248
G L + V EA++ D Y +I+G KL
Sbjct: 794 GYLKQGGVLEAFKGSDE------ENYAAIIEGWNKL 823
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 117 ASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVI 176
A ++ ++A++G P ++ +L + N+ + + F+ + ++ L T I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFT--TAI 267
Query: 177 KWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY----QIVDRIGV 232
C G + +A K+F +M E G+ + +T +V+ GL R EA+ ++V+R
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 233 MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL 281
+ Y L+KGL + +R G+A V +EM K+G P + Y L+ +
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 20/299 (6%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEA-KYVVLKLKEWVKPDGVCYKHLIRGFCDKGD 113
M S G+ N + V+ +C + + + A ++V L + P G LI G C G
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485
Query: 114 LIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYR 173
+A ++W ++GF D ++ L + + EA ++ + + L R + +Y
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI-LGRGCVMDRVSYN 544
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD---RI 230
+I C K + +A +EM +RG++ DN T ++ GL ++V EA Q D R
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 604
Query: 231 GVM-DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR--- 286
G++ D+ Y +I G K R E + F EM+ + +P Y L++ + R GR
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC-RSGRLSM 663
Query: 287 ----------KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFL 335
KG P T + G+ + + E E + GLE F Y +
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 137/318 (43%), Gaps = 20/318 (6%)
Query: 46 KKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHL 104
K +E++ + G+ + T N ++ +C ++EA + + L D V Y L
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 105 IRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRM 164
I G C K L EA + M G +PD ++ LF +N+ EA++ ++ + M
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 606
Query: 165 DELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY 224
+ TY ++I C + Q+ F+EM + +Q + + ++ R+ A
Sbjct: 607 LP-DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 225 QIVDRIGVMDIS----VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
++ + + IS Y LIKG+ + R EA +F EM G EP + Y L+ G+
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 281 LGRRGR-------------KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVP 327
G+ G+ K P T+ +GG + G E + + + +G+
Sbjct: 726 -GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Query: 328 RFDYNKFLHYFSNEEGVL 345
Y +F++ + + GVL
Sbjct: 785 SITYKEFIYGYLKQGGVL 802
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 156/381 (40%), Gaps = 63/381 (16%)
Query: 32 FVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDA--MCGYKLVEEAKYVVLK 89
F A+ ++++ V++F M G N+ T N V+D MCG +EA K
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR--YDEAFMFKEK 320
Query: 90 LKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQ 148
+ E ++P + Y L++G + +A + M +GF P+V ++++ +
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 149 GGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLG 208
+A+++ + M K + L STY +IK C G A+++ +EM G ++ +
Sbjct: 381 LNKAIEIKDLMVSKGLS-LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
Query: 209 SVVYGLLAKHRVREA----------------------------------------YQIVD 228
SV+ LL H + ++ +Q ++
Sbjct: 440 SVI-CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 229 RIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG--- 285
+ V+D + L+ GL + + EA ++ +E++ RGC +Y L+ G G++
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 286 ---------RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLH 336
++G P +I + GL + K E I++ + G+ + Y+ +
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 337 YFS----NEEGVLMFEEMGKK 353
EEG F+EM K
Sbjct: 619 GCCKAERTEEGQEFFDEMMSK 639
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 133/327 (40%), Gaps = 52/327 (15%)
Query: 26 FATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKY 85
F + T I L +L A E +KC E F D +C
Sbjct: 223 FPSKTTCNILLTSLVRANEFQKCCEAF-------------------DVVC---------- 253
Query: 86 VVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFK 145
+ V PD + I FC G + EA K+++ M + G P+V +++ L
Sbjct: 254 ------KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 307
Query: 146 VNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL 205
+ EA E M ++R E L TY +++K + + A V +EM ++G + +
Sbjct: 308 CGRYDEAFMFKEKM-VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI 366
Query: 206 TLGSVVYGLLAKHRVREAYQIVDRI---GV-MDISVYHGLIKGLLKLRRAGEATQVFREM 261
+++ + + +A +I D + G+ + S Y+ LIKG K +A A ++ +EM
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 262 IKRGC---EPTMHTYIMLLQGHL---------GRRGRKGTDPLVNFDTIFVGGLVKVGKA 309
+ G + + + I LL HL G + P T + GL K GK
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 486
Query: 310 REYIKYVERVMNRGLEVPRFDYNKFLH 336
+ ++ + +N+G V N LH
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLH 513
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 123/276 (44%), Gaps = 42/276 (15%)
Query: 9 RNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETL 67
+ +D + L ++ +R D T+ I + L ++++ ++ + NG ++ T
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 68 NKVVDAMCGYKLVEEAK-YVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD 126
+ ++D C + EE + + + + V+P+ V Y HLIR +C G L A ++ M
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 127 EGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMD--------------ELGLS-- 170
+G P+ +++ + +++ EA LFE MR++ ++ +LG
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 171 ------------------TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVY 212
TY ++I G +++A ++ EMRE+GI D++T +Y
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Query: 213 GLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKL 248
G L + V EA++ D Y +I+G KL
Sbjct: 794 GYLKQGGVLEAFKGSDE------ENYAAIIEGWNKL 823
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 117 ASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVI 176
A ++ ++A++G P ++ +L + N+ + + F+ + ++ L T I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFT--TAI 267
Query: 177 KWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY----QIVDRIGV 232
C G + +A K+F +M E G+ + +T +V+ GL R EA+ ++V+R
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 233 MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL 281
+ Y L+KGL + +R G+A V +EM K+G P + Y L+ +
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 155/346 (44%), Gaps = 25/346 (7%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGD 113
M S G+ +++T N ++ MC E V+ ++KE + PD V Y LIRG + GD
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 114 LIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYR 173
L A + M +G P ++ LF N+ A L +R K + L TY
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI-VLDSVTYN 401
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI--- 230
++I C G +A + +EM GIQ T S++Y L K++ REA ++ +++
Sbjct: 402 ILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK 461
Query: 231 GV-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG---------- 279
G+ D+ + + L+ G + A + +EM P TY L++G
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 280 --HLGRRGRKGTDP-LVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLH 336
+G R+G P ++++T+ + G K G + + +++ G YN L
Sbjct: 522 RELMGEMKRRGIKPDHISYNTL-ISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLK 580
Query: 337 YFS-NEEGVLMFEEMGKKLREVGLVDLADILERYGQKMATRDRRRN 381
S N+EG L EE+ ++++ G+V + M+ D +++
Sbjct: 581 GLSKNQEGELA-EELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKS 625
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 140/323 (43%), Gaps = 58/323 (17%)
Query: 3 DVVGKSRNI--DLFWELLSDIARRRFATDRT--FVIALRTLGGARELKKCVEVFHLMNSN 58
+VV +N +LF EL+ +A R T T F + +R R + + +E F+LM
Sbjct: 127 EVVTSRKNSIRNLFDELV--LAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEK 184
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEA-----------------KYVVL--------KLKEW 93
G+ ET N ++ + +E A + ++ KLK+
Sbjct: 185 GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244
Query: 94 -----------VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMET 142
+KP V Y L++GF +G + A I + M +GF+PD++ ++
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW 304
Query: 143 LFKVNQGGEALKLFETMRLKRMDELGL----STYRLVIKWMCNKGMMSQAQKVFEEMRER 198
+ + E L+ M E+GL +Y ++I+ N G + A +EM ++
Sbjct: 305 MCNEGRASEV--------LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQ 356
Query: 199 GIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDISVYHGLIKGLLKLRRAGEA 254
G+ T ++++GL ++++ A ++ I V+D Y+ LI G + A +A
Sbjct: 357 GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKA 416
Query: 255 TQVFREMIKRGCEPTMHTYIMLL 277
+ EM+ G +PT TY L+
Sbjct: 417 FALHDEMMTDGIQPTQFTYTSLI 439
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 118/288 (40%), Gaps = 53/288 (18%)
Query: 99 VCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFET 158
+ + L+R C + EA + + LM ++GF P E ++ L ++N+ A +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 159 M-----------------------RLKR-------MDELGLS----TYRLVIKWMCNKGM 184
M +LK+ M+ G+ TY +++ +G
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 185 MSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISV-YHGLIK 243
+ A+ + EM+ +G Q D T ++ + + R E + + IG++ SV Y+ LI+
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIR 335
Query: 244 GLLKLRRAGEATQVFR---EMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVN------ 294
G G+ F EM+K+G PT +TY L+ G + + L+
Sbjct: 336 G---CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 295 --FDT----IFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLH 336
D+ I + G + G A++ + +M G++ +F Y ++
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIY 440
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 6/225 (2%)
Query: 49 VEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRG 107
+++F LM N ++ N V+ + +E+A L E ++PD V Y +I G
Sbjct: 557 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 616
Query: 108 FCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDEL 167
+C L EA +I+ L+ F P+ + ++ L K N A+++F M ++ +
Sbjct: 617 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA-EKGSKP 675
Query: 168 GLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA---- 223
TY ++ W + + K+FEEM+E+GI ++ ++ GL + RV EA
Sbjct: 676 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 735
Query: 224 YQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEP 268
+Q +D + D+ Y LI+G K+ R EA ++ M++ G +P
Sbjct: 736 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 6/246 (2%)
Query: 44 ELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKH 103
E+ K ++ L+ G+ + + NKV+ + ++ ++ + L L P+ V +
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCT 291
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
LI GFC +G++ A ++ +M G EPD+ A +++ FK G KLF + L +
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF-SQALHK 350
Query: 164 MDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA 223
+L + + I G ++ A V++ M +GI + +T ++ GL R+ EA
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 224 Y----QIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
+ QI+ R I Y LI G K ++ +MIK G P + Y +L+ G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 280 HLGRRG 285
L ++G
Sbjct: 471 -LSKQG 475
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 24/289 (8%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEA-KYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEA 117
GY ++ +VD + L+ A ++ V L + ++ + V + LI G+C EA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 118 SKIWNLMADEGFEPDVEA------VEKMMETLFKVNQGGEALKLFETMRLKRMDELGLST 171
K++ LM G +PDV V M + K + L+LF+ M+ ++ ++
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISA-DIAV 574
Query: 172 YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG 231
+VI + + A K F + E ++ D +T +++ G + R+ EA +I + +
Sbjct: 575 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 634
Query: 232 VM----DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLL---------Q 278
V + LI L K A ++F M ++G +P TY L+ +
Sbjct: 635 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 694
Query: 279 GHLG---RRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGL 324
G KG P + +I + GL K G+ E + ++ L
Sbjct: 695 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL 743
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 125/261 (47%), Gaps = 15/261 (5%)
Query: 30 RTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK 89
+TF I +R L G + +K +E+ +M+ G ++ T N ++ C + +A +
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD 266
Query: 90 LKEW--VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVN 147
+K PD V Y +I G+C G + EAS + + M G P +++ K
Sbjct: 267 VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK-- 324
Query: 148 QGGEALKLFETMRLKRMDELG----LSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
GE L E +R +M G + T+ +I C G +SQ +++EEM RG+ +
Sbjct: 325 -AGEMLTA-EEIR-GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381
Query: 204 NLTLGSVVYGLLAKHRVREAYQIVDRIGVMDI----SVYHGLIKGLLKLRRAGEATQVFR 259
T ++ L ++R+ +A +++ ++ DI +Y+ +I G K + EA +
Sbjct: 382 AFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
Query: 260 EMIKRGCEPTMHTYIMLLQGH 280
EM K+ C+P T+ +L+ GH
Sbjct: 442 EMEKKKCKPDKITFTILIIGH 462
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 140/312 (44%), Gaps = 31/312 (9%)
Query: 62 YNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKH-----LIRGFCDKGDLIE 116
++ T N + ++C L + A ++ E +K DGV + L+ F +KG L
Sbjct: 101 HSFWTYNLLTRSLCKAGLHDLAG----QMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 117 ASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLF-ETMRLKRMDELGLSTYRLV 175
A+ + L+ E V ++ TL K+++ +A+KLF E +R + ++ T+ ++
Sbjct: 157 ATAL--LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDT--KTFNIL 212
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD-----RI 230
I+ +C G +A ++ M G + D +T +++ G + + +A ++ +
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 231 GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL--------- 281
D+ Y +I G K + EA+ + +M++ G PT T+ +L+ G+
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 282 ---GRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYF 338
G+ G P V T + G +VG+ + + E + RG+ F Y+ ++
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 339 SNEEGVLMFEEM 350
NE +L E+
Sbjct: 393 CNENRLLKAREL 404
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 121/288 (42%), Gaps = 31/288 (10%)
Query: 48 CVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRG 107
C+ V L+N+ L L++V DAM KL +E L+ D + LIRG
Sbjct: 171 CMVVNSLLNT------LVKLDRVEDAM---KLFDE------HLRFQSCNDTKTFNILIRG 215
Query: 108 FCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDEL 167
C G +A ++ +M+ G EPD+ +++ K N+ +A ++F+ ++ +
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 168 GLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIV 227
+ TY +I C G M +A + ++M GI N+T +V G + A +I
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 228 DRI----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG---- 279
++ D+ + LI G ++ + + +++ EM RG P TY +L+
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 280 --------HLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERV 319
LG+ K P + G K GK E VE +
Sbjct: 396 NRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 15 WELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAM 74
WE ++ AR F T+ I + L L K E+ + S N V+D
Sbjct: 370 WEEMN--ARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 75 CGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDV 133
C V EA +V ++ K+ KPD + + LI G C KG + EA I++ M G PD
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 134 EAVEKMMETLFKVNQGGEALKLFETMR 160
V ++ L K EA L + R
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYHLNQIAR 514
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 125/261 (47%), Gaps = 15/261 (5%)
Query: 30 RTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK 89
+TF I +R L G + +K +E+ +M+ G ++ T N ++ C + +A +
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD 266
Query: 90 LKEW--VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVN 147
+K PD V Y +I G+C G + EAS + + M G P +++ K
Sbjct: 267 VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK-- 324
Query: 148 QGGEALKLFETMRLKRMDELG----LSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
GE L E +R +M G + T+ +I C G +SQ +++EEM RG+ +
Sbjct: 325 -AGEMLTA-EEIR-GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381
Query: 204 NLTLGSVVYGLLAKHRVREAYQIVDRIGVMDI----SVYHGLIKGLLKLRRAGEATQVFR 259
T ++ L ++R+ +A +++ ++ DI +Y+ +I G K + EA +
Sbjct: 382 AFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
Query: 260 EMIKRGCEPTMHTYIMLLQGH 280
EM K+ C+P T+ +L+ GH
Sbjct: 442 EMEKKKCKPDKITFTILIIGH 462
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 140/312 (44%), Gaps = 31/312 (9%)
Query: 62 YNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKH-----LIRGFCDKGDLIE 116
++ T N + ++C L + A ++ E +K DGV + L+ F +KG L
Sbjct: 101 HSFWTYNLLTRSLCKAGLHDLAG----QMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 117 ASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLF-ETMRLKRMDELGLSTYRLV 175
A+ + L+ E V ++ TL K+++ +A+KLF E +R + ++ T+ ++
Sbjct: 157 ATAL--LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDT--KTFNIL 212
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD-----RI 230
I+ +C G +A ++ M G + D +T +++ G + + +A ++ +
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 231 GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL--------- 281
D+ Y +I G K + EA+ + +M++ G PT T+ +L+ G+
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 282 ---GRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYF 338
G+ G P V T + G +VG+ + + E + RG+ F Y+ ++
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 339 SNEEGVLMFEEM 350
NE +L E+
Sbjct: 393 CNENRLLKAREL 404
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 121/288 (42%), Gaps = 31/288 (10%)
Query: 48 CVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRG 107
C+ V L+N+ L L++V DAM KL +E L+ D + LIRG
Sbjct: 171 CMVVNSLLNT------LVKLDRVEDAM---KLFDE------HLRFQSCNDTKTFNILIRG 215
Query: 108 FCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDEL 167
C G +A ++ +M+ G EPD+ +++ K N+ +A ++F+ ++ +
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 168 GLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIV 227
+ TY +I C G M +A + ++M GI N+T +V G + A +I
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 228 DRI----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG---- 279
++ D+ + LI G ++ + + +++ EM RG P TY +L+
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 280 --------HLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERV 319
LG+ K P + G K GK E VE +
Sbjct: 396 NRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 15 WELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAM 74
WE ++ AR F T+ I + L L K E+ + S N V+D
Sbjct: 370 WEEMN--ARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 75 CGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDV 133
C V EA +V ++ K+ KPD + + LI G C KG + EA I++ M G PD
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 134 EAVEKMMETLFKVNQGGEALKLFETMR 160
V ++ L K EA L + R
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYHLNQIAR 514
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 6/225 (2%)
Query: 49 VEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRG 107
+++F LM N ++ N V+ + +E+A L E ++PD V Y +I G
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 108 FCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDEL 167
+C L EA +I+ L+ F P+ + ++ L K N A+++F M ++ +
Sbjct: 646 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA-EKGSKP 704
Query: 168 GLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA---- 223
TY ++ W + + K+FEEM+E+GI ++ ++ GL + RV EA
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 224 YQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEP 268
+Q +D + D+ Y LI+G K+ R EA ++ M++ G +P
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 6/246 (2%)
Query: 44 ELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKH 103
E+ K ++ L+ G+ + + NKV+ + ++ ++ + L L P+ V +
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCT 291
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
LI GFC +G++ A ++ +M G EPD+ A +++ FK G KLF + L +
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF-SQALHK 350
Query: 164 MDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA 223
+L + + I G ++ A V++ M +GI + +T ++ GL R+ EA
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 224 Y----QIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
+ QI+ R I Y LI G K ++ +MIK G P + Y +L+ G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 280 HLGRRG 285
L ++G
Sbjct: 471 -LSKQG 475
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 14/229 (6%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEA-KYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEA 117
GY ++ +VD + L+ A ++ V L + ++ + V + LI G+C EA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYR 173
K++ LM G +PDV +M + EAL LF RM ++GL Y
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF-----FRMFKMGLEPDALAYC 570
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI--G 231
+I C + ++F+ M+ I D V++ L HR+ +A + + + G
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 232 VM--DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQ 278
M DI Y+ +I G LRR EA ++F + P T +L+
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 679
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 153/379 (40%), Gaps = 55/379 (14%)
Query: 44 ELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYK 102
+L V+ M G N+ T ++ +C + EA + + LK ++P V Y
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 103 HLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETL-----------FKVNQGGE 151
LI GFC G+L ++ M G+ PDV +++ L F V G+
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 152 ALKL----FETM-----RLKRMDE-------LGL-------STYRLVIKWMCNKGMMSQA 188
+++L F ++ RL R DE +G+ +T+ V++ +G + +A
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 189 QKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDISVYHGLIKG 244
+F M + G++ D L +++ + Q+ D + DI+V + +I
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 610
Query: 245 LLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTD------------PL 292
L K R +A++ F +I+ EP + TY ++ G+ R + P
Sbjct: 611 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 670
Query: 293 VNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNE---EGVL-MFE 348
TI + L K I+ + +G + Y + +FS EG +FE
Sbjct: 671 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 730
Query: 349 EMGKKLREVGLVDLADILE 367
EM +K +V + I++
Sbjct: 731 EMQEKGISPSIVSYSIIID 749
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 133/279 (47%), Gaps = 7/279 (2%)
Query: 7 KSRNIDLFWELLSDI-ARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLE 65
K +IDL + LL+ + A + A + + +L R + +F M + G N+
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 66 TLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLM 124
T + ++ +C Y+ +A ++ + E + P+ V + LI F +G L+EA K+++ M
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 125 ADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGM 184
+PD+ ++ ++ EA +FE M K + TY +I C
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNTLINGFCKAKR 415
Query: 185 MSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GVM-DISVYHG 240
+ + ++F EM +RG+ + +T ++++G A + ++ GV +I Y+
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 241 LIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
L+ GL K + +A VF + + EPT++TY ++++G
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 514
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 134/343 (39%), Gaps = 53/343 (15%)
Query: 42 ARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVC 100
+ + V + M GY + T ++ + + EA +V ++ + +P+ V
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 101 YKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR 160
Y ++ G C +GD+ A + N M E +V ++++L K +AL LF M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 161 LKRMDELGLSTYRLVIKWMCN-----------------------------------KGMM 185
K + + TY +I +CN +G +
Sbjct: 288 NKGVRP-NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 186 SQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQ----IVDRIGVMDISVYHGL 241
+A+K+++EM +R I D T S++ G R+ EA ++ + ++ Y+ L
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 242 IKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG------------RKGT 289
I G K +R E ++FREM +RG TY L+ G R G
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 290 DPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYN 332
P + + GL K GK + + E + +E + YN
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 509
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 140/318 (44%), Gaps = 26/318 (8%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEA 117
G +NL T N +++ C + A ++ K+ K +P V L+ G+C + +A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
+ + M + G+ PD ++ LF N+ EA+ L + M ++R + L TY +V+
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVN 233
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVRE----AYQIVDRIGV- 232
+C +G + A + +M I+ N+ + S V L K+R + + ++ GV
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEA-NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 233 MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG------- 285
++ Y LI L R +A+++ +MI+R P + T+ L+ + + G
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV-KEGKLVEAEK 351
Query: 286 ------RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFS 339
++ DP + + + G + E E ++++ YN ++ F
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 340 N----EEGVLMFEEMGKK 353
+EGV +F EM ++
Sbjct: 412 KAKRIDEGVELFREMSQR 429
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 14/193 (7%)
Query: 101 YKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR 160
Y+ ++R L +A ++ M P + K++ + K+ + + L E
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGE--- 109
Query: 161 LKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLA 216
+M LG+S TY ++I C + +S A + +M + G + +TL S++ G
Sbjct: 110 --KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 217 KHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHT 272
R+ +A +VD++ M D + LI GL +A EA + M++RGC+P + T
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 273 YIMLLQGHLGRRG 285
Y +++ G L +RG
Sbjct: 228 YGVVVNG-LCKRG 239
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 106/234 (45%), Gaps = 15/234 (6%)
Query: 63 NLETLNKVVDAMCGY-KLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIW 121
N+ T N ++DA KLVE K +K + PD Y LI GFC L EA ++
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGL----STYRLVIK 177
LM + P+V ++ K + E ++LF + M + GL TY +I
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF-----REMSQRGLVGNTVTYTTLIH 443
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI--GVMD- 234
AQ VF++M G+ + +T +++ GL ++ +A + + + M+
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 235 -ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRK 287
I Y+ +I+G+ K + + +F + +G +P + Y ++ G R+G K
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG-FCRKGLK 556
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 115/262 (43%), Gaps = 7/262 (2%)
Query: 17 LLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC 75
LLSD+ R+ + TF + +L + +++ M ++ T + +++ C
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 76 GYKLVEEAKYVV-LKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVE 134
+ ++EAK++ L + + P+ V Y LI GFC + E +++ M+ G +
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 135 AVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEE 194
++ F+ A +F+ M + + TY ++ +C G + +A VFE
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP-NIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 195 MRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRR 250
++ ++ T ++ G+ +V + + + + + D+ +Y+ +I G +
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 251 AGEATQVFREMIKRGCEPTMHT 272
EA +FR+M + G P T
Sbjct: 556 KEEADALFRKMREDGPLPDSGT 577
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 152/340 (44%), Gaps = 48/340 (14%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRT-FVIALRTLGGARELKKCVEVFHLMNSNG 59
+L+V+ KS L ELL + R D + I + L L +F+ M G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 60 YGYNLETLNKVVDAMC-------GYKLVEE----------AKYVVL--------KLKEW- 93
N+ T N ++ C G KL+ + + VL KL+E
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 94 ----------VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETL 143
+ PD + Y LI GFC + L +A+++ +LM +G +P++ ++
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 144 FKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
K N+ + L+LF M L+ + TY +I+ C G ++ A+++F+EM R + +
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVA-DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 204 NLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQVFR 259
+T ++ GL +A +I ++I +DI +Y+ +I G+ + +A +F
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 532
Query: 260 EMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIF 299
+ +G +P + TY +++ G L ++G PL + +F
Sbjct: 533 SLPLKGVKPGVKTYNIMIGG-LCKKG-----PLSEAELLF 566
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 145/336 (43%), Gaps = 32/336 (9%)
Query: 11 IDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
IDLF ++ I R T F + ++ + + M G +NL TL+ +
Sbjct: 73 IDLFRDM---IHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 71 VDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
++ C + + A + K+ K +P+ + + LI G C +G + EA ++ + M + G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQ 189
+PD+ + ++ L + EA+ L + M ++ + TY V+ MC G + A
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKM-VEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 190 KVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGL 245
++ +M ER I++D + ++ GL + A+ + + + + +I Y+ LI G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 246 LKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVK 305
R + ++ R+MIKR P + T+ ++ + VK
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTF-----------------------SVLIDSFVK 345
Query: 306 VGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNE 341
GK RE + + +++RG+ Y + F E
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 136/304 (44%), Gaps = 20/304 (6%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEA 117
G N T V++ MC A ++ K++E +K D V Y +I G C G L A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
++N M +G ++ ++ + + KL M +KR + T+ ++I
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM-IKRKINPNVVTFSVLID 341
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----M 233
+G + +A+++ +EM RGI D +T S++ G ++ + +A Q+VD +
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG--HLGRR------- 284
+I ++ LI G K R + ++FR+M RG TY L+QG LG+
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 461
Query: 285 ----GRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN 340
RK +V + I + GL G++ + ++ E++ +E+ YN +H N
Sbjct: 462 QEMVSRKVPPNIVTY-KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 341 EEGV 344
V
Sbjct: 521 ASKV 524
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 109/235 (46%), Gaps = 2/235 (0%)
Query: 30 RTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK 89
RTF I + A + +E+F M+ G + T N ++ C + AK + +
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 90 L-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQ 148
+ V P+ V YK L+ G CD G+ +A +I+ + E D+ ++ + ++
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
Query: 149 GGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLG 208
+A LF ++ LK + G+ TY ++I +C KG +S+A+ +F +M E G D T
Sbjct: 524 VDDAWDLFCSLPLKGVKP-GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 582
Query: 209 SVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIK 263
++ L ++ ++++ + SV IK ++ + G + F +M+
Sbjct: 583 ILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 157/371 (42%), Gaps = 39/371 (10%)
Query: 11 IDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
+DLF + + R + F L + ++ + + + G ++L T N +
Sbjct: 57 LDLFTHM---VESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 71 VDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
++ C A + K+ K +PD V + LI GFC + EA + N M + G
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLST----YRLVIKWMCNKGMM 185
+PDV ++++L K AL LF+ +M+ G+ Y ++ +CN G
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFD-----QMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 186 SQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDIS----VYHGL 241
A + M +R I+ D +T +++ + + + +A ++ + + M I+ Y L
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 242 IKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG---------------HLGRRGR 286
I G EA Q+F M +GC P + Y L+ G + ++G
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 287 KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EE 342
G + + T+ + G +VGK + +++RG+ YN LH ++
Sbjct: 349 TGNT--ITYTTL-IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 343 GVLMFEEMGKK 353
+++FE+M K+
Sbjct: 406 ALMIFEDMQKR 416
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 142/320 (44%), Gaps = 27/320 (8%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEA 117
G+ ++ T +++ C +EEA +V ++ E +KPD V Y +I C G + A
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
+++ M + G PDV ++ L + +A L M KR + + T+ +I
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT-KRKIKPDVITFNALID 255
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQ---IVDRIGVM- 233
+G A++++ EM I + T S++ G + V EA Q +++ G
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR------- 286
D+ Y LI G K ++ +A ++F EM ++G TY L+QG G+ G+
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQG-FGQVGKPNVAQEV 374
Query: 287 ------KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNR---GLEVPRFDYNKFLHY 337
+G P + + + L GK ++ + E + R G+ + YN LH
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 338 FSN----EEGVLMFEEMGKK 353
E+ +++FE+M K+
Sbjct: 435 LCYNGKLEKALMVFEDMRKR 454
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 127/272 (46%), Gaps = 33/272 (12%)
Query: 66 TLNKVVDAMCGYKLVEEAKYVVLK------LKEWVKPDGVCYKHLIRGFCDKGDLIEASK 119
T N ++DA V+E K++ + ++ + P+ Y LI GFC +G + EA +
Sbjct: 249 TFNALIDA-----FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 120 IWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWM 179
++ LM +G PDV A ++ K + +A+K+F M K + + TY +I+
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI-TYTTLIQGF 362
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI------GVM 233
G + AQ+VF M RG+ + T +++ L +V++A I + + GV
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422
Query: 234 -DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR------ 286
+I Y+ L+ GL + +A VF +M KR + + TY +++QG + + G+
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG-MCKAGKVKNAVN 481
Query: 287 -------KGTDPLVNFDTIFVGGLVKVGKARE 311
KG P V T + GL + G E
Sbjct: 482 LFCSLPSKGVKPNVVTYTTMISGLFREGLKHE 513
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 7/253 (2%)
Query: 27 ATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC-GYKLVEEAKY 85
+ + +V L L +L + + M G + +LN ++ A+C V+
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178
Query: 86 VVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLF 144
+ L++ K PD Y LI G C G + EA K++ M ++ P V ++ L
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238
Query: 145 KVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDN 204
EA++ E M+ K + E + TY ++ +C G QA ++FE M RG + +
Sbjct: 239 GSKNVDEAMRYLEEMKSKGI-EPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 205 LTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFRE 260
+T +++ GL + +++EA +++DR+ + D +Y +I G + + EA E
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDE 357
Query: 261 MIKRGCEPTMHTY 273
MI G P T+
Sbjct: 358 MILGGITPNRLTW 370
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 161/347 (46%), Gaps = 34/347 (9%)
Query: 19 SDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNS---NGYGYNLETLNKVVDAMC 75
S + +++ + T ++ + ++++K + VF + NGY ++ + +V +
Sbjct: 3 SKVMMFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLV 62
Query: 76 GYKLVEEAKYVVLKLK--EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDV 133
+ A+ +++++K V + + + RG+ ++ ++++ M D +P
Sbjct: 63 SANKFKAAEDLIVRMKIENCVVSEDILL-SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQ 121
Query: 134 EAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGL----STYRLVIKWMC-NKGMMSQA 188
+A ++ L + NQ A K ++ MR E+GL ++ ++IK +C N G +
Sbjct: 122 KAYVTVLAILVEENQLNLAFKFYKNMR-----EIGLPPTVASLNVLIKALCRNDGTVDAG 176
Query: 189 QKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA----YQIVDRIGVMDISVYHGLIKG 244
K+F EM +RG D+ T G+++ GL R+ EA ++V++ + Y LI G
Sbjct: 177 LKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236
Query: 245 LLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR-------------KGTDP 291
L + EA + EM +G EP + TY L+ G L + GR +G P
Sbjct: 237 LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDG-LCKDGRSLQAMELFEMMMARGCRP 295
Query: 292 LVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYF 338
+ T + GL K K +E ++ ++R+ +GL+ Y K + F
Sbjct: 296 NMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGF 342
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 117/278 (42%), Gaps = 48/278 (17%)
Query: 49 VEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRG 107
+++F M G + T ++ +C + ++EAK + ++ E P V Y LI G
Sbjct: 177 LKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236
Query: 108 FCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDEL 167
C ++ EA + M +G EP+V +M+ L K + +A++LFE M + R
Sbjct: 237 LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMM-MARGCRP 295
Query: 168 GLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIV 227
+ TY +I +C + + +A ++ + M +G++ D G V+ G A + REA +
Sbjct: 296 NMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFL 355
Query: 228 DRI--------------------------------------------GV-MDISVYHGLI 242
D + G+ +++ L+
Sbjct: 356 DEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLV 415
Query: 243 KGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
K L K +A Q+ E++ GC P+ T+ +L+ GH
Sbjct: 416 KCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI-GH 452
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 107/228 (46%), Gaps = 9/228 (3%)
Query: 11 IDLFWELLSDIARRRFA-TDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNK 69
ID +L +++ + A T T+ + L G++ + + + M S G N+ T +
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSS 267
Query: 70 VVDAMC-GYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEG 128
++D +C + ++ + + + +P+ V Y LI G C + + EA ++ + M +G
Sbjct: 268 LMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDE------LGLSTYRLVIKWMCNK 182
+PD K++ +++ EA + M L + + + T V++ +C
Sbjct: 328 LKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-A 386
Query: 183 GMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI 230
S+A ++ MR RGI ++ TL S+V L K ++A Q+VD I
Sbjct: 387 NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEI 434
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 147/359 (40%), Gaps = 34/359 (9%)
Query: 12 DLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVV 71
LF ++ D + F T R + R + C F YN+ L +V
Sbjct: 147 SLFISIMRDYDKAGFPGQTT-----RLMLEMRNVYSCEPTFK-------SYNV-VLEILV 193
Query: 72 DAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEP 131
C +K+ Y +L K + P + +++ FC ++ A + M G P
Sbjct: 194 SGNC-HKVAANVFYDMLSRK--IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVP 250
Query: 132 DVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKV 191
+ + ++ +L K N+ EAL+L E M L T+ VI +C +++A K+
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP-DAETFNDVILGLCKFDRINEAAKM 309
Query: 192 FEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRA 251
M RG D++T G ++ GL RV A + RI +I +++ LI G + R
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRL 369
Query: 252 GEATQVFREMIKR-GCEPTMHTYIMLLQGH------------LGRRGRKGTDPLVNFDTI 298
+A V +M+ G P + TY L+ G+ L KG P V TI
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 299 FVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNE----EGVLMFEEMGKK 353
V G K+GK E + + GL+ +N + F E E V +F EM +K
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 9/244 (3%)
Query: 49 VEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRG 107
+EV H M + G N+ + +VD C ++EA V+ ++ + +KP+ V + LI
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 108 FCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDEL 167
FC + + EA +I+ M +G +PDV ++ L +V++ AL L M +
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM-ISEGVVA 527
Query: 168 GLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIV 227
TY +I +G + +A+K+ EM +G +D +T S++ GL V +A +
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 228 DRI-----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLG 282
+++ +IS + LI GL + EA + +EM+ RG P + T+ L+ G L
Sbjct: 588 EKMLRDGHAPSNISC-NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING-LC 645
Query: 283 RRGR 286
R GR
Sbjct: 646 RAGR 649
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 112/249 (44%), Gaps = 10/249 (4%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
G+ + T +++ +C V+ AK + ++ KP+ V + LI GF G L +A
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP---KPEIVIFNTLIHGFVTHGRLDDAK 373
Query: 119 KIW-NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
+ +++ G PDV ++ +K G AL++ MR K + +Y +++
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP-NVYSYTILVD 432
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI---VDRIGV-M 233
C G + +A V EM G++ + + ++ +HR+ EA +I + R G
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLV 293
D+ ++ LI GL ++ A + R+MI G TY L+ L R K LV
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 294 NFDTIFVGG 302
N + +F G
Sbjct: 553 N-EMVFQGS 560
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 124/275 (45%), Gaps = 10/275 (3%)
Query: 11 IDLFWELLSDIARRRFATDRT-FVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNK 69
ID LL D+ + + + + +L + + +++ M G + ET N
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 70 VVDAMCGY-KLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEG 128
V+ +C + ++ E AK V L PD + Y +L+ G C G + A ++ +
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP--- 349
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQA 188
+P++ ++ + +A + M + TY +I +G++ A
Sbjct: 350 -KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 189 QKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GVMDISV-YHGLIKG 244
+V +MR +G + + + +V G ++ EAY +++ + G+ +V ++ LI
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 245 LLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
K R EA ++FREM ++GC+P ++T+ L+ G
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 6/240 (2%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKH 103
+ + VE+F M G ++ T N ++ +C ++ A +++ + E V + V Y
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
LI F +G++ EA K+ N M +G D +++ L + + +A LFE M
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 164 MDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA 223
+S ++I +C GM+ +A + +EM RG D +T S++ GL R+ +
Sbjct: 595 HAPSNISC-NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 224 YQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
+ ++ D ++ L+ L K +A + E I+ G P T+ +LLQ
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 3/215 (1%)
Query: 16 ELLSDIARRRFATD-RTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAM 74
E+ ++ R+ D TF + L E+K + + M S G N T N +++A
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 75 CGYKLVEEAKYVVLKLKEWVKP-DGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDV 133
++EA+ +V ++ P D + Y LI+G C G++ +A ++ M +G P
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599
Query: 134 EAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFE 193
+ ++ L + EA++ + M L R + T+ +I +C G + +F
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVL-RGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 194 EMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD 228
+++ GI D +T +++ L V +A ++D
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 6/255 (2%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEA-KYVVLK 89
+F I + L + V M GY ++ T ++ C + +A V+L
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 90 LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
+K +P+ V Y LI G C G+L A ++ N M +G DV ++ L +
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
+A ++ M +KR + T+ +I +G + +AQ++++EM + + +N+T S
Sbjct: 228 SDAARMLRDM-MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 210 VVYGLLAKHRVREAYQIVDRIG----VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
++ GL R+ +A + D + ++ Y+ LI G K R E ++F+ M G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 266 CEPTMHTYIMLLQGH 280
+ TY L+ G+
Sbjct: 347 FNADIFTYNTLIHGY 361
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 7/299 (2%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
++D + K+ +++ ELL+++ ++ D T+ L L + + M
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
++ T ++D ++EA+ + ++ + V P+ V Y +I G C G L +A
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
K ++LMA +G P+V ++ K E +KLF+ M + + + TY +I
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA-DIFTYNTLIHG 360
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI----GVMD 234
C G + A +F M R + D +T +++GL + A D + +
Sbjct: 361 YCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIG 420
Query: 235 ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLV 293
I Y+ +I GL K + +A ++F + G +P TY +++ G R+ D L+
Sbjct: 421 IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELI 479
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 153/352 (43%), Gaps = 36/352 (10%)
Query: 11 IDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
++LF ++ + R F + F L + + + + M + G +NL T + +
Sbjct: 66 VNLFGDM---VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 71 VDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
++ C + A V+ K+ K +PD V L+ GFC + +A + M + G+
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQ 189
+PD ++ LF+ N+ EA+ L + M +K + L TY +V+ +C +G + A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGC-QPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 190 KVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI---VDRIGV-MDISVYHGLIKGL 245
+ ++M + I+ + +++ L V +A + +D G+ ++ Y+ LI+ L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 246 LKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVK 305
R +A+++ +MI+R P + T+ + + VK
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTF-----------------------SALIDAFVK 338
Query: 306 VGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEMGKK 353
GK E K + ++ R ++ F Y+ ++ F +E MFE M K
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 126/279 (45%), Gaps = 8/279 (2%)
Query: 17 LLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC 75
LLSD+ R+ + TF + +L + +++ M ++ T + +++ C
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 76 GYKLVEEAKYVV-LKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVE 134
+ ++EAK++ L + + P+ V Y LI+GFC + E +++ M+ G +
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 135 AVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEE 194
++ F+ + A +F+ M + + TY +++ +CN G + A VFE
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLP-DIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 195 MRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRR 250
++ ++ D T ++ G+ +V + + + + + ++ Y ++ G +
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 251 AGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGT 289
EA +FREM + G P TY L++ HL R G K
Sbjct: 552 KEEADALFREMKEEGPLPDSGTYNTLIRAHL-RDGDKAA 589
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 144/348 (41%), Gaps = 55/348 (15%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK- 89
T+ +R L R L VE+F+ M +NG N+ T N +V +C +A +++
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 90 LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
+K ++P+ + + LI F G L+EA +++N+M PDV
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV---------------- 293
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
TY +I +C G++ +A+++F M G + + +
Sbjct: 294 --------------------FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333
Query: 210 VVYGLLAKHRVREA----YQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
+++G RV + Y++ + V + Y LI+G + R A +VF +M R
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Query: 266 CEPTMHTYIMLLQGHLGR-------------RGRKGTDPLVNFDTIFVGGLVKVGKAREY 312
P + TY +LL G R R+ +V + TI + G+ K+GK +
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY-TIIIQGMCKLGKVEDA 452
Query: 313 IKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKKLREVGLV 360
+ ++G++ Y + F + + + KK++E G +
Sbjct: 453 FDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 150/355 (42%), Gaps = 39/355 (10%)
Query: 14 FWELLSDIAR-RRFATDRTFVIALRTLGGARELKKCVEVFHL----------------MN 56
F LLS IA+ R+ + ++ LG L C V H M
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145
Query: 57 SNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLI 115
G+ +L T +++ C + +E+A + + L KP+ V Y LIR C L
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLV 175
A +++N M G P+V ++ L ++ + G+A L M +KR E + T+ +
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM-MKRRIEPNVITFTAL 264
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVV-----YGLLAKHRVREAYQIVDRI 230
I G + +A++++ M + + D T GS++ YGLL + R+ + +++R
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDE--ARQMFYLMERN 322
Query: 231 GVMDISV-YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH--------- 280
G V Y LI G K +R + ++F EM ++G TY +L+QG+
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 281 ---LGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYN 332
+ + P + + + GL GK + + E + R +++ Y
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 124/268 (46%), Gaps = 8/268 (2%)
Query: 12 DLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
D W LL D+ +RR + TF + +L + E++++M ++ T +
Sbjct: 241 DAAW-LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 71 VDAMCGYKLVEEAKYVV-LKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
++ +C Y L++EA+ + L + P+ V Y LI GFC + + KI+ M+ +G
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQ 189
+ +++ V + A ++F M +R + TY +++ +C G + +A
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP-DIRTYNVLLDGLCCNGKVEKAL 418
Query: 190 KVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGL 245
+FE MR+R + I+ +T ++ G+ +V +A+ + + ++ Y +I G
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Query: 246 LKLRRAGEATQVFREMIKRGCEPTMHTY 273
+ EA +F++M + G P Y
Sbjct: 479 CRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 152/378 (40%), Gaps = 25/378 (6%)
Query: 11 IDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
+DLF + + R + F L + + +F M G L T N V
Sbjct: 68 LDLFTRM---VHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 71 VDAMC-GYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
+ +C + + ++ +K +PD V + L+ G+C + +A +++ + GF
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQ 189
+P+V ++ L K A++LF M + TY ++ +C G A
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG-SRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 190 KVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA---YQIVDRIGVM-DISVYHGLIKGL 245
+ +M +R I+ + +T +++ + ++ EA Y ++ ++ V D+ Y LI GL
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 246 LKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRR------------GRKGTDPLV 293
EA Q+F M + GC P Y L+ G + +KG
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 294 NFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEE 349
T+ + G VG+ + ++ +R YN L E+ +++FE
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 350 MGKKLREVGLVDLADILE 367
M K+ ++ +V I++
Sbjct: 424 MRKREMDINIVTYTIIIQ 441
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 17/227 (7%)
Query: 101 YKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR 160
Y+ ++R +A ++ M P + +++ + K+N+ + LFE M+
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 161 LKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRV 220
+ + L L T +V+ +C +A +M + G + D +T S++ G +R+
Sbjct: 111 ILGIPPL-LCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 221 REAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIML 276
+A + D+I M ++ Y LI+ L K R A ++F +M G P + TY L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 277 LQG--HLGRRG----------RKGTDPLVNFDTIFVGGLVKVGKARE 311
+ G +GR G ++ +P V T + VKVGK E
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLME 276
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 18/319 (5%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
TF + L + + V + M G +L T V++ +C + A ++ K+
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 91 -KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
K ++ D V Y +I C + +A ++ M ++G PDV ++ L +
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
+A +L M L+R + T+ +I +G + +A+K+F+EM +R I + +T S
Sbjct: 292 SDASRLLSDM-LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 210 VVYGLLAKHRVREAYQI----VDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
++ G R+ EA QI V + + D+ Y+ LI G K ++ + ++FR+M +RG
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 266 CEPTMHTYIMLLQGHLGRRG------------RKGTDPLVNFDTIFVGGLVKVGKAREYI 313
TY L+ G G P + + GL K GK + +
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 314 KYVERVMNRGLEVPRFDYN 332
E + +E + YN
Sbjct: 471 VVFEYLQKSKMEPDIYTYN 489
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 9/274 (3%)
Query: 11 IDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
+DLF E+ + R F + F L + ++ + M G +NL T N +
Sbjct: 50 VDLFGEM---VKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 71 VDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
++ +C + A ++ K+ K P V L+ GFC + EA + + M + G+
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQ 189
+PD ++ LF+ N+ EA+ L E M +K + L TY VI +C +G A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC-QPDLVTYGAVINGLCKRGEPDLAL 225
Query: 190 KVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI---VDRIGV-MDISVYHGLIKGL 245
+ +M + I+ D + +V+ L V +A + +D G+ D+ Y LI L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 246 LKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
R +A+++ +M++R P + T+ L+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 109/266 (40%), Gaps = 40/266 (15%)
Query: 63 NLETLNKVVDAMCGY-KLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIW 121
N+ T N ++DA KL+E K ++ + P+ V Y LI GFC L EA +I+
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR--------------------- 160
LM + PDV ++ K + + ++LF M
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 161 ---------LKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTL 207
K+M G+ TY ++ +C G + +A VFE +++ ++ D T
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Query: 208 GSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQVFREMIK 263
+ G+ +V + + + + + D+ Y+ +I G K EA +F +M +
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Query: 264 RGCEPTMHTYIMLLQGHLGRRGRKGT 289
G P TY L++ HL R G K
Sbjct: 549 DGPLPDSGTYNTLIRAHL-RDGDKAA 573
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 104/227 (45%), Gaps = 8/227 (3%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKH 103
L + ++F LM S ++ T N +++ C K V + + + + + + V Y
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
LI GF D A ++ M +G P++ +++ L K + +A+ +FE ++ +
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 164 MDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA 223
M E + TY ++ + MC G + +F + +G++ D + +++ G K EA
Sbjct: 481 M-EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 224 YQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGC 266
Y + ++ + D Y+ LI+ L+ + ++ +EM R C
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM--RSC 584
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 7/169 (4%)
Query: 13 LFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVD 72
+F +++SD T T + L G +L+K + VF + + ++ T N + +
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNG---KLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 73 AMCGYKLVEEA--KYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFE 130
MC VE+ + L LK VKPD + Y +I GFC KG EA ++ M ++G
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLK-GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552
Query: 131 PDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWM 179
PD ++ + + +L + MR R STY LV +
Sbjct: 553 PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAG-DASTYGLVTDML 600
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 136/308 (44%), Gaps = 21/308 (6%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
TF + L + + V + M G NL T VV+ +C + A ++ K+
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 91 KEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
+ ++ D V + +I C + +A ++ M +G P+V ++ L +
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
+A +L M K+++ L T+ +I +G +A+K++++M +R I D T S
Sbjct: 312 SDASQLLSDMIEKKINP-NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 210 VVYGLLAKHRVREAYQI----VDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
+V G R+ +A Q+ V + D+ Y+ LIKG K +R + T++FREM RG
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 266 CEPTMHTYIMLLQG--HLG----------RRGRKGTDPLVNFDTIFVGGLVKVG---KAR 310
TY L+QG H G + G P + +I + GL G KA
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 311 EYIKYVER 318
E Y+++
Sbjct: 491 EVFDYMQK 498
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 135/294 (45%), Gaps = 15/294 (5%)
Query: 1 MLDVVGKSRNID----LFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMN 56
++D + K R++D LF E+ + R T + + L + G + ++ M
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS---QLLSDMI 322
Query: 57 SNGYGYNLETLNKVVDAMCGY-KLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLI 115
NL T N ++DA K VE K +K + PD Y L+ GFC L
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS-TYRL 174
+A +++ M + PDV +++ K + + +LF M + + +G + TY
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL--VGDTVTYTT 440
Query: 175 VIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV-- 232
+I+ + + G AQKVF++M G+ D +T ++ GL ++ +A ++ D +
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 233 --MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRR 284
+DI +Y +I+G+ K + + +F + +G +P + TY ++ G +R
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 554
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 110/227 (48%), Gaps = 8/227 (3%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKH 103
L K ++F M S ++ T N ++ C K VE+ + ++ + D V Y
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
LI+G GD A K++ M +G PD+ +++ L + +AL++F+ M+ K
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-KS 499
Query: 164 MDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA 223
+L + Y +I+ MC G + +F + +G++ + +T +++ GL +K ++EA
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 224 YQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGC 266
Y ++ ++ + + Y+ LI+ L+ + ++ REM R C
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM--RSC 604
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 33/301 (10%)
Query: 62 YNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKI 120
+ L T N +++ C + A ++ K+ K +P V L+ G+C + +A +
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 121 WNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMC 180
+ M + G+ PD ++ LF N+ EA+ L + M ++R + L TY +V+ +C
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVNGLC 236
Query: 181 NKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GV-MDIS 236
+G A + +M I+ D + +++ L V +A + + G+ ++
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 237 VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFD 296
Y LI L R +A+Q+ +MI++ P + T+ L+
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID------------------ 338
Query: 297 TIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEMGK 352
VK GK E K + ++ R ++ F YN ++ F ++ MFE M
Sbjct: 339 -----AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 353 K 353
K
Sbjct: 394 K 394
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 94/190 (49%), Gaps = 8/190 (4%)
Query: 101 YKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR 160
Y+ ++R L +A ++ M P + K++ + K+ + + L E M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM- 111
Query: 161 LKRMDEL-GLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHR 219
+R++ + GL TY ++I C + +S A + +M + G + +TL S++ G R
Sbjct: 112 -QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 220 VREAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIM 275
+ +A +VD++ M D + LI GL +A EA + M++RGC+P + TY +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 276 LLQGHLGRRG 285
++ G L +RG
Sbjct: 231 VVNG-LCKRG 239
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 107/238 (44%), Gaps = 17/238 (7%)
Query: 21 IARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLV 80
+++ F T+ ++ ++ ++ E+F M+ G + T ++ +
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451
Query: 81 EEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKM 139
+ A+ V ++ + V PD + Y L+ G C+ G L +A ++++ M + D+ M
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 140 METLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERG 199
+E + K + + LF ++ LK + + TY +I +C+K ++ +A + ++M+E G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKP-NVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 200 IQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQV 257
++ T Y L + +R+ D + LI+ + R G+A+ +
Sbjct: 571 PLPNSGT-----YNTLIRAHLRDG----------DKAASAELIREMRSCRFVGDASTI 613
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 139/333 (41%), Gaps = 59/333 (17%)
Query: 14 FWELLSDI-ARRRFA----TDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLN 68
++ L+ D+ A+ R + T F ++ A+ +K + F+ M + + LN
Sbjct: 99 YFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLN 158
Query: 69 KVVDAMCGYKLVEEAKYVVLKLKEW--VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD 126
+++D + ++ + + + K V P+ Y L++ FC DL A +++ M +
Sbjct: 159 RILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLE 218
Query: 127 EGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMS 186
PDV+ +Y+++I+ C KG ++
Sbjct: 219 RDVVPDVD------------------------------------SYKILIQGFCRKGQVN 242
Query: 187 QAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLI 242
A ++ ++M +G D L+ +++ L K ++REAY+++ R+ + D+ Y+ +I
Sbjct: 243 GAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMI 302
Query: 243 KGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG------------HLGRRGRKGTD 290
G + RA +A +V +M+ GC P +Y L+ G +L KG
Sbjct: 303 LGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFS 362
Query: 291 PLVNFDTIFVGGLVKVGKAREYIKYVERVMNRG 323
P + V G GK E VE VM G
Sbjct: 363 PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 110/233 (47%), Gaps = 8/233 (3%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKH 103
L+K E+F +G N + N ++ A C + A + K+ E V PD YK
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
LI+GFC KG + A ++ + M ++GF PD + ++ +L + Q EA KL M+LK
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 164 MDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA 223
+ L Y +I C + A+KV ++M G ++++ +++ GL + E
Sbjct: 291 CNP-DLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEG 349
Query: 224 Y----QIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHT 272
+++ + SV + L+KG + EA V ++K G T+H+
Sbjct: 350 KKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG--ETLHS 400
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 150/350 (42%), Gaps = 45/350 (12%)
Query: 9 RNIDLFWELLSDIARRRFATDRTFVI---ALRTLGGARELKKCVEVFHLMNSNGYGYNLE 65
R +++F+ + + F D + I L TL G ++ V+ M +G+ N+
Sbjct: 129 RAVEMFYRI------KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVF 182
Query: 66 TLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLM 124
T N ++ A+C V+ AK +++++ + PD V Y +I C+ G + E ++
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL---- 238
Query: 125 ADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWMC 180
E FEP V ++ L K + A FE MR M E G+S +Y +I +C
Sbjct: 239 -AERFEPVVSVYNALINGLCKEHDYKGA---FELMR--EMVEKGISPNVISYSTLINVLC 292
Query: 181 NKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY----QIVDRIGVM-DI 235
N G + A +M +RG + TL S+V G + +A Q++ G+ ++
Sbjct: 293 NSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNV 352
Query: 236 SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR--------- 286
Y+ L++G +A VF M + GC P + TY L+ G +RG
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING-FAKRGSLDGAVYIWN 411
Query: 287 ----KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVM--NRGLEVPRFD 330
G P V T V L + K +E +E + N VP F+
Sbjct: 412 KMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFN 461
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 22/289 (7%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEA 117
G N+ N +V C + + +A V ++E P+ Y LI GF +G L A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
IWN M G P+V M+E L + ++ EA L E M K + T+ IK
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS-KENCAPSVPTFNAFIK 465
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNL-TLGSVVYGLLAKHRVREAYQIVDRIGVMDI- 235
+C+ G + A+KVF +M ++ N+ T ++ GL +R+ EAY + I + +
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 236 ---SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLL-----QGHLGRR--- 284
S Y+ L+ G G A Q+ +M+ G P T M++ QG R
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
Query: 285 ------GRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVP 327
GR+ P V T + GL + + + +ER+++ G+ VP
Sbjct: 586 LDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGI-VP 633
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 150/363 (41%), Gaps = 32/363 (8%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATD----RTFVIALRTLGGARELKKCVEVFHLMN 56
+L + K+ +D +LL +++ + D T + ++ +G +E ++ E F +
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVV 246
Query: 57 SNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIE 116
S Y + L K D ++L+ E +++ + P+ + Y LI C+ G +
Sbjct: 247 S-VYNALINGLCKEHDYKGAFELMREM------VEKGISPNVISYSTLINVLCNSGQIEL 299
Query: 117 ASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVI 176
A M G P++ + +++ F +AL L+ M + + Y ++
Sbjct: 300 AFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLV 359
Query: 177 KWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI----GV 232
+ C+ G + +A VF M E G + T GS++ G + + A I +++
Sbjct: 360 QGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC 419
Query: 233 MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR------ 286
++ VY +++ L + + EA + M K C P++ T+ ++G L GR
Sbjct: 420 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG-LCDAGRLDWAEK 478
Query: 287 ---------KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHY 337
+ +V ++ + + GL K + E + RG+E YN LH
Sbjct: 479 VFRQMEQQHRCPPNIVTYNEL-LDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537
Query: 338 FSN 340
N
Sbjct: 538 SCN 540
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 107/244 (43%), Gaps = 15/244 (6%)
Query: 128 GFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQ 187
G +P V+ +++TL N+ ++ M+ E + TY +++K +C +
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGF-EPNVFTYNVLLKALCKNNKVDG 199
Query: 188 AQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLK 247
A+K+ EM +G D ++ +V+ + V+E ++ +R + +SVY+ LI GL K
Sbjct: 200 AKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPV-VSVYNALINGLCK 258
Query: 248 LRRAGEATQVFREMIKRGCEPTMHTYIMLLQ------------GHLGRRGRKGTDPLVNF 295
A ++ REM+++G P + +Y L+ L + ++G P +
Sbjct: 259 EHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYT 318
Query: 296 DTIFVGGLVKVGKAREYIK-YVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKKL 354
+ V G G + + + + + GL+ YN + F + ++ + +
Sbjct: 319 LSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM 378
Query: 355 REVG 358
E+G
Sbjct: 379 EEIG 382
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 148/330 (44%), Gaps = 22/330 (6%)
Query: 49 VEVFHLMNS---NGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLI 105
+E HL+ + GY ++ K++ + + +A V+ L+++ +PD Y LI
Sbjct: 106 IESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALI 165
Query: 106 RGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMD 165
GFC + +A+++ + M + F PD M+ +L + ALK+ + L
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL-LSDNC 224
Query: 166 ELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQ 225
+ + TY ++I+ +G + +A K+ +EM RG++ D T +++ G+ + V A++
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 226 IVDRIGV----MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL 281
+V + + D+ Y+ L++ LL + E ++ +M C+P + TY +L+ L
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT-TL 343
Query: 282 GRRGR-------------KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPR 328
R G+ KG P + + G+ I+++E +++ G
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 329 FDYNKFLHYFSNEEGVLMFEEMGKKLREVG 358
+YN L E+ KL EVG
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 14/226 (6%)
Query: 63 NLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIW 121
N+ T + ++ +C +EEA ++ +KE + PD Y LI FC +G L A +
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIK 177
M +G PD+ ++ TL K + +AL++F ++ E+G S +Y +
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF-----GKLGEVGCSPNSSSYNTMFS 446
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMD--- 234
+ + G +A + EM GI D +T S++ L + V EA++++ + +
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 235 -ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
+ Y+ ++ G K R +A V M+ GC P TY +L++G
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 149/366 (40%), Gaps = 46/366 (12%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFAT----DRTFVIALRTLGGARELKKCVEVFHLMN 56
ML+ +G++RN+++ L I RR DR F +R+ G A ++ V++F M
Sbjct: 106 MLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMK 165
Query: 57 SNGYGYNLETLNKVVDAMC-------GYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFC 109
G ++ T N ++ + + L +E ++ V PD + LI GFC
Sbjct: 166 QMGISPSVLTFNSLLSILLKRGRTGMAHDLFDE-----MRRTYGVTPDSYTFNTLINGFC 220
Query: 110 DKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMD-ELG 168
+ EA +I+ M PDV +++ L + + A + M K D
Sbjct: 221 KNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPN 280
Query: 169 LSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD 228
+ +Y +++ C K + +A VF +M RG++ + +T +++ GL HR E I+
Sbjct: 281 VVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL- 339
Query: 229 RIG--------VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
IG D ++ LIK A +VF+EM+ P +Y +L++
Sbjct: 340 -IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL 398
Query: 281 LGRR-------------------GRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMN 321
R G+ PL L GK ++ K ++M
Sbjct: 399 CMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMK 458
Query: 322 RGLEVP 327
RG++ P
Sbjct: 459 RGVQDP 464
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 15/255 (5%)
Query: 43 RELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE---WVKPDGV 99
+E+ + V VFH M S G N T N ++ + +E K +++ + PD
Sbjct: 295 QEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDAC 354
Query: 100 CYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETM 159
+ LI+ CD G L A K++ M + PD + ++ TL N+ A LF +
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 160 RLKRM----DELG--LSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
K + DE + Y + +++C G QA+KVF ++ +RG+Q D + +++ G
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITG 473
Query: 214 LLAKHRVREAYQI----VDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPT 269
+ + + AY++ + R V D+ Y LI GLLK+ A A + M++ P
Sbjct: 474 HCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPV 533
Query: 270 MHTYIMLLQGHLGRR 284
T+ +L L +R
Sbjct: 534 ATTFHSVL-AELAKR 547
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 123/281 (43%), Gaps = 48/281 (17%)
Query: 66 TLNKVVDAMCGYKLVEEAKYVV---LKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWN 122
T N ++D +C V+ A V+ LK V P+ V Y L+RG+C K ++ EA +++
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH 305
Query: 123 LMADEGFEPDVEAVEKMMETLFKVNQ----------GGEALKLFETMRLKRMDELGLSTY 172
M G +P+ +++ L + ++ G +A F T+
Sbjct: 306 DMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAP---------DACTF 356
Query: 173 RLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV 232
++IK C+ G + A KVF+EM + D+ + ++ L ++ A + + +
Sbjct: 357 NILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFE 416
Query: 233 MDI-----------SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL 281
++ + Y+ + + L + +A +VFR+++KRG + +Y L+ GH
Sbjct: 417 KEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDP-PSYKTLITGHC 475
Query: 282 GRRG-------------RKGTDPLVNFDTIFVGGLVKVGKA 309
R G R+ P + + + GL+K+G+A
Sbjct: 476 -REGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEA 515
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 21/308 (6%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
TF + L + + V + M G NL T VV+ +C ++ A ++ K+
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 91 KEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
+ ++ D V + +I C + +A ++ M +G P+V ++ L +
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
+A +L M K+++ L T+ +I +G +A+K+ ++M +R I D T S
Sbjct: 237 SDASQLLSDMIEKKINP-NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 210 VVYGLLAKHRVREAYQI----VDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
++ G R+ +A Q+ V + D+ Y+ LIKG K +R + T++FREM RG
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 266 CEPTMHTYIMLLQG--HLG----------RRGRKGTDPLVNFDTIFVGGLVKVG---KAR 310
TY L+QG H G + G P + +I + GL G KA
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 311 EYIKYVER 318
E Y+++
Sbjct: 416 EVFDYMQK 423
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 134/297 (45%), Gaps = 21/297 (7%)
Query: 1 MLDVVGKSRNID----LFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMN 56
++D + K R++D LF E+ + R T + + L + G + ++ M
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS---QLLSDMI 247
Query: 57 SNGYGYNLETLNKVVDAMCGY-KLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLI 115
NL T N ++DA K VE K +K + PD Y LI GFC L
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----T 171
+A +++ M + PD++ +++ K + + +LF + M GL T
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF-----REMSHRGLVGDTVT 362
Query: 172 YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG 231
Y +I+ + + G AQKVF++M G+ D +T ++ GL ++ +A ++ D +
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Query: 232 V----MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRR 284
+DI +Y +I+G+ K + + +F + +G +P + TY ++ G +R
Sbjct: 423 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 479
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 111/227 (48%), Gaps = 8/227 (3%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKH 103
L K ++F M S +L+T N ++ C K VE+ + ++ + D V Y
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
LI+G GD A K++ M +G PD+ +++ L + +AL++F+ M+ K
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-KS 424
Query: 164 MDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA 223
+L + Y +I+ MC G + +F + +G++ + +T +++ GL +K ++EA
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 224 YQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGC 266
Y ++ ++ + D Y+ LI+ L+ + ++ REM R C
Sbjct: 485 YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM--RSC 529
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 130/304 (42%), Gaps = 33/304 (10%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEA 117
G +NL T N +++ C + A ++ K+ K +P V L+ G+C + +A
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 99
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
+ + M + G+ PD ++ LF N+ EA+ L + M ++R + L TY +V+
Sbjct: 100 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVN 158
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GV-M 233
+C +G + A + +M I+ D + +++ L V +A + + G+
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLV 293
++ Y LI L R +A+Q+ +MI++ P + T+ L
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL----------------- 261
Query: 294 NFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEE 349
+ VK GK E K + ++ R ++ F YN ++ F ++ MFE
Sbjct: 262 ------IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 350 MGKK 353
M K
Sbjct: 316 MVSK 319
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 131 PDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMS 186
P + K++ + K+ + + L E +M LG+S TY ++I C + +S
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGE-----KMQRLGISHNLYTYNILINCFCRRSQIS 62
Query: 187 QAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLI 242
A + +M + G + +TL S++ G R+ +A +VD++ M D + LI
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 243 KGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG 285
GL +A EA + M++RGC+P + TY +++ G L +RG
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG-LCKRG 164
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 107/238 (44%), Gaps = 17/238 (7%)
Query: 21 IARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLV 80
+++ F T+ ++ ++ ++ E+F M+ G + T ++ +
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 81 EEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKM 139
+ A+ V ++ + V PD + Y L+ G C+ G L +A ++++ M + D+ M
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 140 METLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERG 199
+E + K + + LF ++ LK + + TY +I +C+K ++ +A + ++M+E G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKP-NVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 200 IQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQV 257
D+ T Y L + +R+ D + LI+ + R G+A+ +
Sbjct: 496 PLPDSGT-----YNTLIRAHLRDG----------DKAASAELIREMRSCRFVGDASTI 538
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 13/251 (5%)
Query: 70 VVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEG 128
+++ +C E A ++ K++E +K V Y +I C G I A ++ M D+G
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQA 188
PDV M+++ + + +A +L M ++R + T+ +I + +G +S+A
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDM-IERQINPDVVTFSALINALVKEGKVSEA 165
Query: 189 QKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDISVYHGLIKG 244
++++ +M RGI +T S++ G + R+ +A +++D + D+ + LI G
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Query: 245 LLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLV 304
K +R ++F EM +RG TY L+ G L+N ++
Sbjct: 226 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNV-------MI 278
Query: 305 KVGKAREYIKY 315
G A YI +
Sbjct: 279 SSGVAPNYITF 289
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 23/262 (8%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
+PD V + L+ G C +G +++A + + M +EG +P ++ L K+ AL
Sbjct: 6 CRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESAL 61
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
L M + + + Y +I +C G AQ +F EM ++GI D +T ++
Sbjct: 62 NLLSKMEETHI-KAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 214 LLAKHRVREAYQI----VDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPT 269
R +A Q+ ++R D+ + LI L+K + EA +++ +M++RG PT
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 270 MHTYIMLLQGH------------LGRRGRKGTDP-LVNFDTIFVGGLVKVGKAREYIKYV 316
TY ++ G L K P +V F T+ + G K + ++
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL-INGYCKAKRVDNGMEIF 239
Query: 317 ERVMNRGLEVPRFDYNKFLHYF 338
+ RG+ Y +H F
Sbjct: 240 CEMHRRGIVANTVTYTTLIHGF 261
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Query: 66 TLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLM 124
T + +++A+ V EA+ + L+ + P + Y +I GFC + L +A ++ + M
Sbjct: 148 TFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSM 207
Query: 125 ADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGM 184
A + PDV ++ K + +++F M +R TY +I C G
Sbjct: 208 ASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH-RRGIVANTVTYTTLIHGFCQVGD 266
Query: 185 MSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI 230
+ AQ + M G+ + +T S++ L +K +R+A+ I++ +
Sbjct: 267 LDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Query: 90 LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
++ V P+ Y LI GFC G L +A +++LM +G PDV ++ K +
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
+ +KLF M + + TY +I C G ++ AQKVF M + G+ D +T
Sbjct: 341 EDGMKLFCEMTYQGLVGDAF-TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 399
Query: 210 VVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
++ L ++ +A +V+ + +DI Y+ +I+GL + + EA +FR + ++G
Sbjct: 400 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459
Query: 266 CEPTMHTYIMLLQGHLGRRG 285
+P YI ++ G L R+G
Sbjct: 460 VKPDAIAYITMISG-LCRKG 478
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 91/181 (50%), Gaps = 2/181 (1%)
Query: 51 VFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFC 109
+F LM S G ++ T N ++ C K VE+ + ++ + + D Y LI G+C
Sbjct: 311 MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC 370
Query: 110 DKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGL 169
G L A K++N M D G PD+ +++ L + +AL + E ++ MD + +
Sbjct: 371 QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD-VDI 429
Query: 170 STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDR 229
TY ++I+ +C + +A +F + +G++ D + +++ GL K REA ++ R
Sbjct: 430 ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRR 489
Query: 230 I 230
+
Sbjct: 490 M 490
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 158/380 (41%), Gaps = 31/380 (8%)
Query: 12 DLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVV 71
LF E+L R + F L + + + ++H M + G ++L + ++
Sbjct: 65 SLFCEMLQS---RPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 72 DAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFE 130
C + A ++ K+ K +P V L+ GFC EA + + M GF
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 131 PDVEAVEKMMETLFKVNQGGEALKLFETMRLK--RMDELGLSTYRLVIKWMCNKGMMSQA 188
P+V ++ L K AL++F M K R D + TY +I + N G + A
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV---TYNTLISGLSNSGRWTDA 238
Query: 189 QKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA----YQIVDRIGVMDISVYHGLIKG 244
++ +M +R I + + +++ + + + EA +++ R V ++ Y+ LI G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 245 LLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL-GRRGRKGTDPLV---------- 293
G+A +F M+ +GC P + TY L+ G +R G
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 294 --NFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMF 347
++T+ + G + GK K R+++ G+ YN L N E+ ++M
Sbjct: 359 AFTYNTL-IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 348 EEMGKKLREVGLVDLADILE 367
E++ K +V ++ I++
Sbjct: 418 EDLQKSEMDVDIITYNIIIQ 437
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 135/300 (45%), Gaps = 25/300 (8%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKH 103
L + V + + M+ +G ++ T + +++ C + AK +V ++ + + P+G+ Y
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
LI C G L EA +I+ M EG D ++ +L K + EA E MR
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE---EFMRCMT 575
Query: 164 MDELGLST--YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVR 221
D + +T + +I N G +A VF+EM + G T GS++ GL +R
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 222 EAYQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLL 277
EA + + + +D +Y+ L+ + K +A +F EM++R P +TY L+
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Query: 278 QGHLGRRG--------------RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRG 323
G L R+G R P T FV G+ K G+ + I + E++ N G
Sbjct: 696 SG-LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 143/357 (40%), Gaps = 78/357 (21%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMC-------GYKLVEEAKYVVLKLKEWVKPD 97
K +E+ M S G ++ T N ++ +C GY L+ + + K + P+
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR------KRMIHPN 337
Query: 98 GVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFE 157
V Y LI GF ++G ++ AS++ N M G P+ +++ EALK+F
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 158 TMRLK------------------------------RMDELGLS----TYRLVIKWMCNKG 183
M K RM G+ TY +I +C G
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 184 MMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDIS----VYH 239
+ +A + EM + GI D +T +++ G R + A +IV RI + +S +Y
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 240 GLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIF 299
LI ++ EA +++ MI L+GH T F+ +
Sbjct: 518 TLIYNCCRMGCLKEAIRIYEAMI--------------LEGH--------TRDHFTFN-VL 554
Query: 300 VGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNE-EGV---LMFEEMGK 352
V L K GK E +++ + + G+ ++ ++ + N EG+ +F+EM K
Sbjct: 555 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 611
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 123/329 (37%), Gaps = 57/329 (17%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMC-GYKLVEEAKYVVLKLKEWVKPDGVCYKH 103
++ +E+F LM G+ ++ T N ++ ++ + V ++ LK + PD +
Sbjct: 179 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 238
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
LI C +G ++S + M G+ P +
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTI------------------------------ 268
Query: 164 MDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA 223
TY V+ W C KG A ++ + M+ +G+ D T +++ L +R+ +
Sbjct: 269 ------VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG 322
Query: 224 YQIV----DRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
Y ++ R+ + Y+ LI G + A+Q+ EM+ G P T+ L+ G
Sbjct: 323 YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 382
Query: 280 HLGRRG------------RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVP 327
H+ KG P + + GL K + + R+ G+ V
Sbjct: 383 HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG 442
Query: 328 RFDYNKFLHYFSN----EEGVLMFEEMGK 352
R Y + +E V++ EM K
Sbjct: 443 RITYTGMIDGLCKNGFLDEAVVLLNEMSK 471
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 9/185 (4%)
Query: 101 YKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR 160
Y LIR + +G + ++ +I+ LM GF P V ++ ++ K GE + ++ ++
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK---SGEDVSVWSFLK 222
Query: 161 --LKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKH 218
LKR ++T+ ++I +C +G ++ + ++M + G +T +V++ K
Sbjct: 223 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 282
Query: 219 RVREAYQIVDRI---GV-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYI 274
R + A +++D + GV D+ Y+ LI L + R + + R+M KR P TY
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342
Query: 275 MLLQG 279
L+ G
Sbjct: 343 TLING 347
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 123/273 (45%), Gaps = 8/273 (2%)
Query: 5 VGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYN 63
+ +S +++ ++L R DR TF + + E+ ++ +M S G +
Sbjct: 839 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 898
Query: 64 LETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWN 122
+T + +V + +E++ V+ ++ K+ + P+ Y LI G C GD+ A +
Sbjct: 899 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 958
Query: 123 LMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNK 182
M P A M+ L K + EA L M LK ++++ ++ C
Sbjct: 959 EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM-LKMKLVPTIASFTTLMHLCCKN 1017
Query: 183 GMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDISVY 238
G + +A ++ M G+++D ++ ++ GL AK + A+++ + + + + + Y
Sbjct: 1018 GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1077
Query: 239 HGLIKGLLKLRRA-GEATQVFREMIKRGCEPTM 270
LI+GLL A A + ++++ RG +M
Sbjct: 1078 KALIRGLLARETAFSGADIILKDLLARGFITSM 1110
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 156/347 (44%), Gaps = 20/347 (5%)
Query: 32 FVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK 91
+V A++ G ++++ V VF M+ + + N ++ + ++A V ++++
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 92 E-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGG 150
+ + PD + ++ FC A ++ N M+ +G E +V A ++ ++ N
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 151 EALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSV 210
E +LF M L L LST+ +++ +C KG + + +K+ +++ +RG+ + T
Sbjct: 199 EGYELFGKM-LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 211 VYGLLAKHR----VREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGC 266
+ GL + VR ++++ D+ Y+ LI GL K + EA +M+ G
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 267 EPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVG-------------GLVKVGKAREYI 313
EP +TY L+ G+ + + +V D +F G GL G+ +
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVG-DAVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376
Query: 314 KYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKKLREVGLV 360
+ +G++ YN + SN+ +L ++ ++ E GL+
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 171/410 (41%), Gaps = 59/410 (14%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
+L V+ K ++ +LL + +R + T+ + ++ L EL V + + G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
++ T N ++ +C +EA+ + K+ E ++PD Y LI G+C G + A
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLF---------------------- 156
+I GF PD +++ L + AL LF
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 157 -------ETMRL-KRMDELGL----STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDN 204
E +L M E GL T+ +++ +C G +S A + + M +G D
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 205 LTLGSVVYGLLAKHRVREAYQIVDRI---GV-MDISVYHGLIKGLLKLRRAGEATQVFRE 260
T +++G + ++ A +I+D + GV D+ Y+ L+ GL K + + + ++
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 261 MIKRGCEPTMHTYIMLLQ------------GHLGRRGRKGTDP-LVNFDTIFVGGLVKVG 307
M+++GC P + T+ +LL+ G L K +P V F T+ + G K G
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL-IDGFCKNG 580
Query: 308 K---AREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKKL 354
A + +E P YN +H F+ + V M E++ +++
Sbjct: 581 DLDGAYTLFRKMEEAYKVSSSTPT--YNIIIHAFTEKLNVTMAEKLFQEM 628
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 22/268 (8%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T+ L L + + +E + M G NL T N +++++C Y+ ++EA ++ ++
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 91 K-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD----EGFEPDVEAVEKMMETLFK 145
K + V PD V + LI GFC GDL A ++ M + P +
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 146 VNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL 205
V A KLF+ M + + G TYRL++ C G ++ K EM E G
Sbjct: 618 VTM---AEKLFQEMVDRCLGPDGY-TYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLT 673
Query: 206 TLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKL------RRAGEATQVFR 259
TLG V+ L + RV EA I+ R+ V GL+ + + V
Sbjct: 674 TLGRVINCLCVEDRVYEAAGIIHRM------VQKGLVPEAVNTICDVDKKEVAAPKLVLE 727
Query: 260 EMIKRGCEPTMHTYIMLLQGHLGRRGRK 287
+++K+ C T + Y +L G +R RK
Sbjct: 728 DLLKKSC-ITYYAYELLFDGLRDKRLRK 754
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 141/321 (43%), Gaps = 24/321 (7%)
Query: 11 IDLFWELLSDIARRRFATD-RTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNK 69
ID FW++ ++ + + TF + + + +L + + VF+ M G N+ + N
Sbjct: 199 IDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNM 258
Query: 70 VVDAMCGYKLVEEAKYVVLKLK----EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMA 125
++D C + A ++ K+ +V P+ V Y +I GFC G L A +I M
Sbjct: 259 MIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMV 318
Query: 126 DEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMM 185
G + + +++ + EAL+L + M K + + Y ++ W+ +G +
Sbjct: 319 KSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGL-VVNTVIYNSIVYWLFMEGDI 377
Query: 186 SQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY----QIVDRIGVMDISVYHGL 241
A V +M + +QID T VV GL V+EA QI ++ V DI ++ L
Sbjct: 378 EGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTL 437
Query: 242 IKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL-------------GRRGRKG 288
+ ++ ++ A Q+ M+ +G ++ L+ G+L G
Sbjct: 438 MHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNK 497
Query: 289 TDPLVNFDTIFVGGLVKVGKA 309
T LV +++I V GL K G A
Sbjct: 498 TSNLVIYNSI-VNGLSKRGMA 517
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 95 KPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALK 154
PD + L+R GD A ++ EGF V A+ M L VN+ K
Sbjct: 147 SPD--VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWK 204
Query: 155 LFETMRLKRMDELG----LSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSV 210
++ K MD LG ++T+ LVI C + + +A VF M + G+ + ++ +
Sbjct: 205 VY-----KEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMM 259
Query: 211 VYGLLAKHRVREAYQIVDRIGVM-------DISVYHGLIKGLLKLRRAGEATQVFREMIK 263
+ G +R A Q++ ++G+M + Y+ +I G K R A ++ +M+K
Sbjct: 260 IDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVK 319
Query: 264 RGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRG 323
G + TY L+ + GR G+ + E ++ + + ++G
Sbjct: 320 SGVDCNERTYGALVDAY----GRAGS-------------------SDEALRLCDEMTSKG 356
Query: 324 LEVPRFDYNKFLHYFSNEEGVLMFEEMGKKLREVGLVDLADILERYGQKMATRDRRRN 381
L V YN +++ E + E LR++ ++ ++R+ Q + R RN
Sbjct: 357 LVVNTVIYNSIVYWLFMEGDI---EGAMSVLRDMNSKNMQ--IDRFTQAIVVRGLCRN 409
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 116/273 (42%), Gaps = 42/273 (15%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW------------------------- 93
GY ++ TLN +++ C + +A +V ++ E
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 94 -----------VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMET 142
+PD V Y ++ G C +GD A + N M E +V ++++
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 143 LFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQI 202
L K +AL LF M K + + TY +I +CN G S A ++ +M ER I
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRP-NVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321
Query: 203 DNLTLGSVVYGLLAKHRVREAYQI----VDRIGVMDISVYHGLIKGLLKLRRAGEATQVF 258
+ +T +++ + K ++ +A ++ + R +I Y LI G L R GEA Q+
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 259 REMIKRGCEPTMHTYIMLLQGHL-GRRGRKGTD 290
MI++ C P + TY L+ G +R KG +
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 132/326 (40%), Gaps = 53/326 (16%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEA 117
GY + T ++ + + EA ++ ++ + +PD V Y ++ G C +GD A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
+ N M E +V ++++L K +AL LF M K + + TY +I
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP-NVITYSSLIS 296
Query: 178 WMCN-----------------------------------KGMMSQAQKVFEEMRERGIQI 202
+CN KG + +A+K++EEM +R I
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 203 DNLTLGSVVYGLLAKHRVREAYQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQVF 258
+ T S++ G R+ EA Q+++ + + ++ Y+ LI G K +R + ++F
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 259 REMIKRGCEPTMHTYIMLLQGHLGRRG------------RKGTDPLVNFDTIFVGGLVKV 306
REM +RG TY L+ G R G P + I + GL K
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Query: 307 GKAREYIKYVERVMNRGLEVPRFDYN 332
GK + + E + +E + YN
Sbjct: 477 GKLAKAMVVFEYLQRSTMEPDIYTYN 502
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 132/280 (47%), Gaps = 9/280 (3%)
Query: 7 KSRNIDLFWELLSDI-ARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLE 65
K + DL LL+ + A + A + + +L R + +F M + G N+
Sbjct: 230 KRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 289
Query: 66 TLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLM 124
T + ++ +C Y +A ++ + E + P+ V + LI F KG L++A K++ M
Sbjct: 290 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Query: 125 ADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDEL-GLSTYRLVIKWMCNKG 183
+P++ ++ +++ GEA ++ E M R D L + TY +I C
Sbjct: 350 IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM--IRKDCLPNVVTYNTLINGFCKAK 407
Query: 184 MMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDR---IGVM-DISVYH 239
+ + ++F EM +RG+ + +T ++++G A + + +GV +I Y+
Sbjct: 408 RVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 467
Query: 240 GLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
L+ GL K + +A VF + + EP ++TY ++++G
Sbjct: 468 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 140/333 (42%), Gaps = 55/333 (16%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEA 117
G +NL T N +++ C + A ++ K+ K +PD V L+ GFC + +A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
+ + M + G++PD ++ LF N+ EA+ L + M ++R + L TY V+
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRM-VQRGCQPDLVTYGAVVN 226
Query: 178 WMCNKGMM-----------------------------------SQAQKVFEEMRERGIQI 202
+C +G A +F EM +G++
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 203 DNLTLGSVVYGLLAKHRVREAYQI----VDRIGVMDISVYHGLIKGLLKLRRAGEATQVF 258
+ +T S++ L R +A ++ ++R ++ + LI +K + +A +++
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 259 REMIKRGCEPTMHTYIMLLQGH--LGRRG----------RKGTDP-LVNFDTIFVGGLVK 305
EMIKR +P + TY L+ G L R G RK P +V ++T+ + G K
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL-INGFCK 405
Query: 306 VGKAREYIKYVERVMNRGLEVPRFDYNKFLHYF 338
+ + ++ + RGL Y +H F
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 17 LLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC 75
LLSD+ R+ + TF + +L K +++ M N+ T + +++ C
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 76 GYKLVEEAKYVV-LKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVE 134
+ EAK ++ L +++ P+ V Y LI GFC + + +++ M+ G +
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 135 AVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQK 190
++ F+ A +F K+M +G+ TY +++ +C G +++A
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVF-----KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 484
Query: 191 VFEEMRERGIQIDNLTLGSVVYGL 214
VFE ++ ++ D T ++ G+
Sbjct: 485 VFEYLQRSTMEPDIYTYNIMIEGM 508
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 119/246 (48%), Gaps = 6/246 (2%)
Query: 32 FVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK 91
+++ ++ L A+ + M +G ++ + N V+D +C + +E A + +++
Sbjct: 393 YLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ 452
Query: 92 E-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGG 150
+ + P+ V + + G+ +GD+ + + + GF+PDV ++ L + +
Sbjct: 453 DRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIK 512
Query: 151 EALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSV 210
+A F+ M L+ E TY ++I+ C+ G ++ K+F +M+E G+ D +
Sbjct: 513 DAFDCFKEM-LEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNAT 571
Query: 211 VYGLLAKHRVREAYQIVD---RIGV-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGC 266
+ +V++A +++ RIG+ D Y LIK L + R EA ++F + + GC
Sbjct: 572 IQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGC 631
Query: 267 EPTMHT 272
P +T
Sbjct: 632 VPDSYT 637
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 145/345 (42%), Gaps = 19/345 (5%)
Query: 13 LFWELLSDIARRRF-ATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVV 71
L ELL +I + +D + + + G K C +VF ++ G + N V+
Sbjct: 128 LSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVI 187
Query: 72 DAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFE 130
DA+ ++ A +++ + KPD Y LI G C KG + EA ++ M EG
Sbjct: 188 DALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNR 247
Query: 131 PDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQK 190
P+V +++ + EALK E MR+++++ +T R + + +A +
Sbjct: 248 PNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNP-NEATIRTFVHGIFRCLPPCKAFE 306
Query: 191 VFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDISVYHGLIKGLL 246
V E+ + + +V+Y L +E Q + +IG + D S ++ + LL
Sbjct: 307 VLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLL 366
Query: 247 KLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG------------HLGRRGRKGTDPLVN 294
K E ++F + RG +P + Y++L+Q +L + G G V
Sbjct: 367 KGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVY 426
Query: 295 FDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFS 339
+ L K + ++ + +RG+ +N FL +S
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYS 471
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 104/212 (49%), Gaps = 11/212 (5%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
++D + K+R I+ L+++ R + + TF L ++KK V + +G
Sbjct: 431 VIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHG 490
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEAS 118
+ ++ T + +++ +C K +++A ++ EW ++P+ + Y LIR C GD +
Sbjct: 491 FKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSV 550
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRL 174
K++ M + G PD+ A +++ K+ + +A +L LK M +GL TY
Sbjct: 551 KLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEEL-----LKTMLRIGLKPDNFTYST 605
Query: 175 VIKWMCNKGMMSQAQKVFEEMRERGIQIDNLT 206
+IK + G S+A+++F + G D+ T
Sbjct: 606 LIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 103/268 (38%), Gaps = 28/268 (10%)
Query: 96 PDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKL 155
PD + + DL+E +I++ G +P +++ L + E +
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRY 412
Query: 156 FETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLL 215
+ M + + + +Y VI +C + A EM++RGI + +T + + G
Sbjct: 413 LKQMGVDGLLS-SVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYS 471
Query: 216 AKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMH 271
+ V++ + +++++ V D+ + +I L + + +A F+EM++ G EP
Sbjct: 472 VRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEI 531
Query: 272 TYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDY 331
TY I + G +K ++ GL + Y
Sbjct: 532 TY-----------------------NILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAY 568
Query: 332 NKFLHYFSNEEGVLMFEEMGKKLREVGL 359
N + F V EE+ K + +GL
Sbjct: 569 NATIQSFCKMRKVKKAEELLKTMLRIGL 596
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 33/310 (10%)
Query: 54 LMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKG 112
L+ S+ Y N+ T ++ C + A+ + ++KE + P+ Y LI G C G
Sbjct: 348 LVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAG 407
Query: 113 DLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTY 172
A ++ NLM DEGF P++ +++L K ++ EA +L ++ G+ TY
Sbjct: 408 SFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGV-TY 466
Query: 173 RLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA---YQIVDR 229
++I+ C + ++QA F M + G + D ++ + +++E+ +Q+V
Sbjct: 467 TILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVS 526
Query: 230 IGVMDI-SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKG 288
+G++ Y +I K A + F M + GC P TY G L
Sbjct: 527 LGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTY-----GSL------- 574
Query: 289 TDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFS----NEEGV 344
+ GL K E K E +++RGL P + + + +
Sbjct: 575 -----------ISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM 623
Query: 345 LMFEEMGKKL 354
++ E + KKL
Sbjct: 624 ILLEPLDKKL 633
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 136/302 (45%), Gaps = 21/302 (6%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEA 117
G+ + T ++ A+C LV A + K+ + KP+ + + LI G C KG + +A
Sbjct: 247 GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA 306
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMD--ELGLSTYRLV 175
++ M G++P+V +++ L K +A +LF ++L R D + + TY +
Sbjct: 307 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF--LKLVRSDTYKPNVHTYTSM 364
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG---- 231
I C + +++A+ +F M+E+G+ + T +++ G AY++++ +G
Sbjct: 365 IGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGF 424
Query: 232 VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQ------------G 279
+ +I Y+ I L K RA EA ++ + G E TY +L+Q
Sbjct: 425 MPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALA 484
Query: 280 HLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFS 339
R + G + + + I + + K +E + + V++ GL + Y + +
Sbjct: 485 FFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYC 544
Query: 340 NE 341
E
Sbjct: 545 KE 546
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 133/319 (41%), Gaps = 27/319 (8%)
Query: 36 LRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK-EWV 94
LR L + V + M + G + T+N V++ L+E A+ V ++ V
Sbjct: 154 LRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGV 213
Query: 95 KPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALK 154
PD YK ++ G G + EA + M GF PD ++ L + A+
Sbjct: 214 VPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIW 273
Query: 155 LFETMRLKRMDELG----LSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSV 210
F ++M +LG L + +I +C KG + QA ++ EEM G + + T ++
Sbjct: 274 YF-----RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328
Query: 211 VYGLLAKHRVREAYQIVDRIGVMD-----ISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
+ GL + +A+++ ++ D + Y +I G K + A +F M ++G
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 388
Query: 266 CEPTMHTYIMLLQGH-----LGRR-------GRKGTDPLVNFDTIFVGGLVKVGKAREYI 313
P ++TY L+ GH GR G +G P + + L K +A E
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448
Query: 314 KYVERVMNRGLEVPRFDYN 332
+ + + + GLE Y
Sbjct: 449 ELLNKAFSCGLEADGVTYT 467
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 140/292 (47%), Gaps = 23/292 (7%)
Query: 1 MLDVVGKSRNIDLFWELLSDIA--RRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSN 58
++D++GK ++ W L++ + TF I + A +++ ++ + ++
Sbjct: 87 VIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDD- 145
Query: 59 GYGYNLE---TLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKH------LIRGFC 109
+NL + +VDA+C +K V EA+ + V +G + ++RG+
Sbjct: 146 ---FNLRDETSFYNLVDALCEHKHVVEAEELCFGKN--VIGNGFSVSNTKIHNLILRGWS 200
Query: 110 DKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGL 169
G + + W M EG D+ + M+ + K + +A+KL++ M+ +RM +L +
Sbjct: 201 KLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRM-KLDV 259
Query: 170 STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDR 229
Y VI+ + + +VF EMRERG + + T +++ L R+R+AY+++D
Sbjct: 260 VAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDE 319
Query: 230 I---GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQ 278
+ G S+ + + +L + E +F MI+ G P M TY+ML++
Sbjct: 320 MPKRGCQPDSITYMCL--FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMR 369
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 6/222 (2%)
Query: 63 NLETLNKVVDAMC-GYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIW 121
N+ +VD C +LV V +K V P+ Y LI G C G+++EA +
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCN 181
+ M PDV ++ L +Q EA +LF+ M+ +R+ +TY +I C
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP-SSATYNSLIHGYCK 421
Query: 182 KGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA----YQIVDRIGVMDISV 237
+ M QA + EM G++ + +T +++ G ++ A +++ + V D+
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481
Query: 238 YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
Y LI K EA +++ +M++ G P HT+ L+ G
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 523
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 126/315 (40%), Gaps = 31/315 (9%)
Query: 79 LVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEK 138
L EEA +V ++K PD ++ G + + LM G PDV
Sbjct: 147 LFEEALWVSREMK--CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFV 204
Query: 139 MMETLFKVNQGGEALKLFETMRLKRMDELGLST----YRLVIKWMCNKGMMSQAQKVFEE 194
+ + FK + KL L M LG+ Y + I +C M +A+K+FE
Sbjct: 205 LFQCCFKQGLYSKKEKL-----LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFEL 259
Query: 195 MRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRR 250
M++ G+ + T +++ G VR+AY + I V ++ V+ L+ G K R
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 251 AGEATQVFREMIKRGCEPTMHTYIMLLQGH------------LGRRGRKGTDPLVNFDTI 298
A +F M+K G +P ++ Y L+ GH L P V TI
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
Query: 299 FVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEMGKKL 354
+ GL + E + +++ N + YN +H + E+ + + EM
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 355 REVGLVDLADILERY 369
E ++ + +++ Y
Sbjct: 440 VEPNIITFSTLIDGY 454
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 6/235 (2%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGD 113
M S ++ T +++ +C V EA + K+K E + P Y LI G+C + +
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN 424
Query: 114 LIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYR 173
+ +A + + M G EP++ +++ V A+ L+ M +K + + TY
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP-DVVTYT 483
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM 233
+I + M +A +++ +M E GI ++ T +V G + R+ A
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Query: 234 DISVYH----GLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRR 284
H LI+GL + A++ F +M G P + +Y+ +L+GHL +
Sbjct: 544 RSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEK 598
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 98/239 (41%), Gaps = 9/239 (3%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDL 114
+ N Y Y + L+ D K+ E K L K V P+ Y +I G+C G++
Sbjct: 230 IKPNVYIYTIYILDLCRDN----KMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNV 285
Query: 115 IEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRL 174
+A ++ + P+V +++ K + A LF M +D L Y
Sbjct: 286 RQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDP-NLYVYNC 344
Query: 175 VIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMD 234
+I C G M +A + EM + D T ++ GL + +V EA ++ ++
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
Query: 235 I----SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGT 289
I + Y+ LI G K +A + EM G EP + T+ L+ G+ R K
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 24 RRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEA 83
R F + T+ + +++ +++ M ++G N+ T + ++D C + ++ A
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 84 K--YVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMME 141
Y + +K V PD V Y LI + ++ EA ++++ M + G P+ +++
Sbjct: 464 MGLYFEMTIKGIV-PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 522
Query: 142 TLFKVNQGGEALKLFETMRLKRM--DELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERG 199
+K + A+ ++ +R + +G + +I+ +C G + +A + F +MR G
Sbjct: 523 GFWKEGRLSVAIDFYQENNQQRSCWNHVGFTC---LIEGLCQNGYILRASRFFSDMRSCG 579
Query: 200 IQIDNLTLGSVVYGLLAKHRVREA 223
I D + S++ G L + R+ +
Sbjct: 580 ITPDICSYVSMLKGHLQEKRITDT 603
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 115/260 (44%), Gaps = 7/260 (2%)
Query: 17 LLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC 75
LLS++ + D T+ I + L ++ + +F M + + T N ++ C
Sbjct: 361 LLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYC 420
Query: 76 GYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVE 134
+E+A + ++ V+P+ + + LI G+C+ D+ A ++ M +G PDV
Sbjct: 421 KEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Query: 135 AVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEE 194
+++ FK EAL+L+ M L+ T+ ++ +G +S A ++E
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDM-LEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Query: 195 MRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD---RIGVM-DISVYHGLIKGLLKLRR 250
++ +++ ++ GL + A + G+ DI Y ++KG L+ +R
Sbjct: 540 NNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKR 599
Query: 251 AGEATQVFREMIKRGCEPTM 270
+ + +MIK G P +
Sbjct: 600 ITDTMMLQCDMIKTGILPNL 619
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 6/228 (2%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
+F I + + ++ L++ + + + + G+ + N ++ C EA V K+
Sbjct: 232 SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 91 KE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
KE V+PD + Y LI G G + EA M D G+EPD +M + + +
Sbjct: 292 KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGES 351
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
AL L E M R TY ++ +C +M + +++E M+ G+++++ +
Sbjct: 352 LGALSLLEEME-ARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYAT 410
Query: 210 VVYGLLAKHRVREAYQI----VDRIGVMDISVYHGLIKGLLKLRRAGE 253
+V L+ +V EAY++ VD + D S Y L L L++A E
Sbjct: 411 LVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKE 458
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 128/282 (45%), Gaps = 20/282 (7%)
Query: 11 IDLFWELLSDIARRRFATDR-TFVIALRTLGGARE--LKKCVEVFHLMNSNGYGYNLETL 67
+ LF +L ++ F R TF+I L A + + V +LM +NG + T
Sbjct: 105 VKLFQHILK--SQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTT 162
Query: 68 NKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD 126
+ V ++C V+EAK ++ +L E PD Y L++ C DL + + M D
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD 222
Query: 127 E-GFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLST----YRLVIKWMCN 181
+ +PD+ + +++ + EA+ L + ++ G Y ++K C
Sbjct: 223 DFDVKPDLVSFTILIDNVCNSKNLREAMYL-----VSKLGNAGFKPDCFLYNTIMKGFCT 277
Query: 182 KGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA----YQIVDRIGVMDISV 237
S+A V+++M+E G++ D +T ++++GL RV EA +VD D +
Sbjct: 278 LSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT 337
Query: 238 YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
Y L+ G+ + + A + EM RGC P TY LL G
Sbjct: 338 YTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHG 379
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 133/312 (42%), Gaps = 29/312 (9%)
Query: 87 VLKLKEWVKPDGVCYKHLIRGFCDKGD--LIEASKIWNLMADEGFEPDVEAVEKMMETLF 144
+LK + +P + L+ C D + ++ NLM + G EPD + + +L
Sbjct: 111 ILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC 170
Query: 145 KVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRER-GIQID 203
+ + EA L + + K TY ++K +C + + +EMR+ ++ D
Sbjct: 171 ETGRVDEAKDLMKELTEKHSPP-DTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPD 229
Query: 204 NLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFR 259
++ ++ + +REA +V ++G D +Y+ ++KG L + EA V++
Sbjct: 230 LVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYK 289
Query: 260 EMIKRGCEPTMHTYIMLLQGHLGRRGR-------------KGTDPLVNFDTIFVGGLVKV 306
+M + G EP TY L+ G L + GR G +P T + G+ +
Sbjct: 290 KMKEEGVEPDQITYNTLIFG-LSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
Query: 307 GKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEM---GKKLREVGL 359
G++ + +E + RG YN LH ++G+ ++E M G KL G
Sbjct: 349 GESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGY 408
Query: 360 VDLADILERYGQ 371
L L + G+
Sbjct: 409 ATLVRSLVKSGK 420
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 17/261 (6%)
Query: 30 RTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC-GYKLVEEAKYVVL 88
T + LGG ++ K V M N NL T N ++D L K
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 321
Query: 89 KLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQ 148
L + VKP+ + Y LI G C+ G + EA + + M G +P++ ++ K +
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 149 GGEALKLFETMR------LKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQI 202
EAL +F +++ RM Y ++I C G + + EEM GI
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRM-------YNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 203 DNLTLGSVVYGLLAKHRVREAYQIVDRI---GVMDISVYHGLIKGLLKLRRAGEATQVFR 259
D T ++ GL + A ++ D++ G+ D+ +H L++G + + +A + +
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLK 494
Query: 260 EMIKRGCEPTMHTYIMLLQGH 280
EM K G +P TY ++++G+
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGY 515
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 128/288 (44%), Gaps = 25/288 (8%)
Query: 60 YGYNLETLN--KVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIE 116
YGY L L+ ++ A+ + +YV ++ + ++P+ + +I C G + +
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 117 ASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDE----LGLSTY 172
A + M G P+V + +++ K+ G+ K LK M E L+T+
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK--ADAVLKEMVENDVSPNLTTF 299
Query: 173 RLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI-- 230
++I + + KVF+EM ++ ++ + ++ S++ GL ++ EA + D++
Sbjct: 300 NILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVS 359
Query: 231 -GVM-DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH--LGR--- 283
GV ++ Y+ LI G K EA +F + +G PT Y ML+ + LG+
Sbjct: 360 AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDD 419
Query: 284 -------RGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGL 324
R+G P V + GL + G K +++ ++GL
Sbjct: 420 GFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 8/225 (3%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGD 113
M S G NL T N +++ C +++EA + +K + P Y LI +C G
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 114 LIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYR 173
+ + + M EG PDV ++ L + A KLF+ + K + +L T+
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDL--VTFH 474
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI-----VD 228
++++ C KG +A + +EM + G++ +LT V+ G + ++ A + +
Sbjct: 475 ILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE 534
Query: 229 RIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTY 273
R M+++ Y+ L++G + + +A + EM+++G P TY
Sbjct: 535 RRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 128 GFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQ 187
G++ + + +M L K N+ + +++ M ++R + + T+ +VI +C G M++
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEM-IRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 188 AQKVFEEMRERGIQIDNLTLGSVVYG---LLAKHRVREAYQIVDRIGVMDIS----VYHG 240
A+ V E+M+ G + ++ +++ G L ++ +A ++ + D+S ++
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 241 LIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFV 300
LI G K + +VF+EM+ + +P + +Y + L+N
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY----------------NSLIN------ 339
Query: 301 GGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEE 342
GL GK E I +++++ G++ YN ++ F +
Sbjct: 340 -GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKND 380
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 139/331 (41%), Gaps = 53/331 (16%)
Query: 7 KSRNIDLFWELLSDI-ARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLE 65
K +IDL LL+ + A R A F + +L R ++ V++F M + G N+
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 66 TLNKVVDAMCGY------------------------------------KLVEEAKYVVLK 89
T N +++ +C Y KLVE K
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 90 LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
++ + PD + Y LI GFC L EA +++ M + P+++ ++ K +
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 150 GEALKLFETMRLKRMDELGL----STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL 205
+ ++LF + M + GL TY +I+ G AQ VF++M + D +
Sbjct: 415 EDGVELF-----REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 206 TLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQVFREM 261
T +++GL + ++ A I + ++I +Y+ +I+G+ K + GEA +F +
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Query: 262 IKRGCEPTMHTYIMLLQGHLGRRGRKGTDPL 292
+P + TY ++ G +R + D L
Sbjct: 530 ---SIKPDVVTYNTMISGLCSKRLLQEADDL 557
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 170/411 (41%), Gaps = 34/411 (8%)
Query: 3 DVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGY 62
D++ +DLF ++ + R F + F L + + + + + M + G +
Sbjct: 60 DIIKVDDAVDLFGDM---VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH 116
Query: 63 NLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIW 121
+L T + ++ C + A V+ K+ K +PD V L+ G+C + +A +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCN 181
+ M + G++PD ++ LF N+ EA+ L + M ++R + L TY V+ +C
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM-VQRGCQPDLVTYGTVVNGLCK 235
Query: 182 KGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GV-MDISV 237
+G + A + +M I+ + + +++ L V A + + G+ ++
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 238 YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR----------- 286
Y+ LI L R +A+++ M+++ P + T+ L+ + G+
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF-KEGKLVEAEKLHEEM 354
Query: 287 --KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN---- 340
+ DP + + G + E + + ++++ YN ++ F
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 341 EEGVLMFEEMGKKLREVGLVDLADILERYGQ-------KMATRDRRRNRCP 384
E+GV +F EM ++ V I++ + Q +M + NR P
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 5/164 (3%)
Query: 49 VEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRG 107
VE+F M+ G N T ++ + A+ V ++ V D + Y L+ G
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 108 FCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDEL 167
C G L A I+ + E ++ M+E + K + GEA LF ++ +K
Sbjct: 478 LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP---- 533
Query: 168 GLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVV 211
+ TY +I +C+K ++ +A +F +M+E G ++ T +++
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 12/279 (4%)
Query: 9 RNIDLFWELLSDIARR--RFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLET 66
R D ++LL ++ D FV +R G AR +K+ + V L++ G +L+
Sbjct: 90 RRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKV 149
Query: 67 LNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMA 125
N ++D + + ++ K+ + D Y L++G + + K+ +M
Sbjct: 150 FNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMK 209
Query: 126 DEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMM 185
G P+ ++ L K + G A L M+ E T+ ++I CN+ +
Sbjct: 210 TSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK-----EPNDVTFNILISAYCNEQKL 264
Query: 186 SQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI----GVMDISVYHGL 241
Q+ + E+ G D +T+ V+ L + RV EA ++++R+ G +D+ + L
Sbjct: 265 IQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTL 324
Query: 242 IKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
+KG L + A + F EM ++G P + TY +L+ G+
Sbjct: 325 VKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGY 363
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 43/273 (15%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T+ I ++ L + ++ +M ++G N N ++ A+C V A+ ++ ++
Sbjct: 184 TYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM 243
Query: 91 KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGG 150
KE P+ V + LI +C++ LI++ + GF PDV V K+ME L +
Sbjct: 244 KE---PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVS 300
Query: 151 EALKLFE-------------------------TMRLKR-----MDELG----LSTYRLVI 176
EAL++ E MR+ + M+ G + TY L+I
Sbjct: 301 EALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLI 360
Query: 177 KWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMD-- 234
C+ GM+ A F +M+ I+ + T +++ GL R + +I++ + D
Sbjct: 361 AGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTV 420
Query: 235 ----ISVYHGLIKGLLKLRRAGEATQVFREMIK 263
I Y+ +I G K R +A + +M K
Sbjct: 421 HGARIDPYNCVIYGFYKENRWEDALEFLLKMEK 453
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 139/315 (44%), Gaps = 24/315 (7%)
Query: 63 NLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWN 122
++ + N + + K+++E + + + P+ V Y I FC G+L A K ++
Sbjct: 128 DIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFH 187
Query: 123 LMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNK 182
M + P+V +++ K A+ L++ MR RM L + TY +I C K
Sbjct: 188 SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM-SLNVVTYTALIDGFCKK 246
Query: 183 GMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GV-MDISVY 238
G M +A++++ M E ++ ++L +++ G + A + + ++ G+ +DI+ Y
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAY 306
Query: 239 HGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR------------ 286
+I GL + EAT++ +M K P M + ++ + + GR
Sbjct: 307 GVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF-KSGRMKAAVNMYHKLI 365
Query: 287 -KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVL 345
+G +P V + + G+ K G+ E I Y + + +V Y + E +
Sbjct: 366 ERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKANDVM---YTVLIDALCKEGDFI 420
Query: 346 MFEEMGKKLREVGLV 360
E + K+ E GLV
Sbjct: 421 EVERLFSKISEAGLV 435
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 115/231 (49%), Gaps = 11/231 (4%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGD 113
M + G ++ ++ +CG ++EA +V + K + PD V + ++ + G
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGR 353
Query: 114 LIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYR 173
+ A +++ + + GFEPDV A+ M++ + K Q EA+ F +++ +++ Y
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF---CIEKANDV---MYT 407
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG-- 231
++I +C +G + +++F ++ E G+ D S + GL + + +A+++ R+
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467
Query: 232 --VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
++D+ Y LI GL EA QVF EM+ G P + +L++ +
Sbjct: 468 GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAY 518
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 149/339 (43%), Gaps = 23/339 (6%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T+ + T + EL+ ++ FH M + N+ T ++D C +E A + ++
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Query: 91 KEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
+ + + V Y LI GFC KG++ A ++++ M ++ EP+ +++ F+
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDS 284
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
A+K M + M L ++ Y ++I +C G + +A ++ E+M + + D + +
Sbjct: 285 DNAMKFLAKMLNQGM-RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343
Query: 210 VVYGLLAKHRVREA----YQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
++ R++ A +++++R D+ +I G+ K + EA F I++
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKA 401
Query: 266 CEPTMHTYI----------MLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKY 315
M+T + + ++ + G P T ++ GL K G + K
Sbjct: 402 -NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKL 460
Query: 316 VERVMNRGLEVPRFDYNKFLHYFSNE----EGVLMFEEM 350
R++ GL + Y ++ +++ E +F+EM
Sbjct: 461 KTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEM 499
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 9/227 (3%)
Query: 63 NLETLNKVVDAMC--GYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKI 120
++ T N +V+ C GY +VE +YV ++ PD Y I G C + ++ A K+
Sbjct: 154 DIYTFNTLVNGYCKLGY-VVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKV 212
Query: 121 WNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMC 180
+ M G + + +++ LF+ + EAL L M+ + TY ++I +C
Sbjct: 213 FKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCP-NVRTYTVLIDALC 271
Query: 181 NKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GVM-DIS 236
G S+A +F++M E GI+ D+ ++ + + EA +++ + G+M ++
Sbjct: 272 GSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVI 331
Query: 237 VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGR 283
Y+ LIKG K + +A + +M+++ P + TY L+ G
Sbjct: 332 TYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSS 377
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 5/184 (2%)
Query: 100 CYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETM 159
CY +L+ G + E +++ M ++ PD+ ++ K+ EA K + T
Sbjct: 122 CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEA-KQYVTW 180
Query: 160 RLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHR 219
++ + TY I C + + A KVF+EM + G + ++ ++YGL +
Sbjct: 181 LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK 240
Query: 220 VREAYQIV----DRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIM 275
+ EA ++ D ++ Y LI L + EA +F++M + G +P Y +
Sbjct: 241 IDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTV 300
Query: 276 LLQG 279
L+Q
Sbjct: 301 LIQS 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 41 GARELKKCVEVFHL---MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKP 96
G E KK E L M + N+ T ++DA+CG EA + ++ E +KP
Sbjct: 234 GLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKP 293
Query: 97 DGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLF 156
D Y LI+ FC L EAS + M + G P+V +++ K N +A+ L
Sbjct: 294 DDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNV-HKAMGLL 352
Query: 157 ETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGI 200
M L++ L TY +I C+ G + A ++ M E G+
Sbjct: 353 SKM-LEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGL 395
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 11/191 (5%)
Query: 43 RELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVC-- 100
+E+ +VF M NG N + +++ + K ++EA +++K+K+ D C
Sbjct: 204 KEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKD----DNCCPN 259
Query: 101 ---YKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFE 157
Y LI C G EA ++ M++ G +PD ++++ + EA L E
Sbjct: 260 VRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Query: 158 TMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAK 217
M L+ + TY +IK C K + +A + +M E+ + D +T +++ G +
Sbjct: 320 HM-LENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSS 377
Query: 218 HRVREAYQIVD 228
+ AY+++
Sbjct: 378 GNLDSAYRLLS 388
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 129/281 (45%), Gaps = 11/281 (3%)
Query: 5 VGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGAR-ELKKCVEVFHLMNSNGYGYN 63
G +R I E+L D+A D +L R L++ V + S+G N
Sbjct: 258 CGSARAI----EVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELN 313
Query: 64 LETLNKVVDAMCGYKLVEEAKYVV-LKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWN 122
T N ++ ++C ++ +E + ++ + + P + Y LI G C L A +
Sbjct: 314 TVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFY 373
Query: 123 LMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNK 182
M ++ PD+ ++ + K +A++L ++ GL TY VI + K
Sbjct: 374 QMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLK-NTCCPPGLITYNSVIDGLAKK 432
Query: 183 GMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIV----DRIGVMDISVY 238
G+M +A +++ +M + GI D++T S++YG + V EA Q++ +R + S Y
Sbjct: 433 GLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTY 492
Query: 239 HGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
+I+GL K + A +V M+ GC+P Y +++G
Sbjct: 493 RLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKG 533
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 14 FWELLSDIARRRFATDR-----TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLN 68
+W+ + +I + T T+ I + L AR L + ++ F+ M ++ T N
Sbjct: 329 YWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYN 388
Query: 69 KVVDAMCGYKLVEEAKYVVLKLKEWVKPDG-VCYKHLIRGFCDKGDLIEASKIWNLMADE 127
V+ AM +V++A ++ LK P G + Y +I G KG + +A ++++ M D
Sbjct: 389 TVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDA 448
Query: 128 GFEPDVEAVEKMMETLFKVN---QGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGM 184
G PD ++ + N + G+ LK ET R + + STYRLVI+ +C K
Sbjct: 449 GIFPDDITRRSLIYGFCRANLVEEAGQVLK--ETS--NRGNGIRGSTYRLVIQGLCKKKE 504
Query: 185 MSQAQKVFEEMRERGIQIDNLTLGSVVYGL 214
+ A +V E M G + D ++V G+
Sbjct: 505 IEMAIEVVEIMLTGGCKPDETIYTAIVKGV 534
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 102/254 (40%), Gaps = 50/254 (19%)
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLK- 162
++ C G L +A K+ +MA P + ++ L +++Q +A+ + M +
Sbjct: 110 ILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSG 169
Query: 163 -RMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVR 221
D + TY ++I +C KG + A + E+M G D +T
Sbjct: 170 GVPDTI---TYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVIT--------------- 211
Query: 222 EAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL 281
Y+ +I+ + A +A + +++ ++ GC P M TY +L++
Sbjct: 212 ----------------YNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVC 255
Query: 282 GRRGR------------KGTDP-LVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPR 328
G +G P +V ++++ V + G E ++ +++ GLE+
Sbjct: 256 RYCGSARAIEVLEDMAVEGCYPDIVTYNSL-VNYNCRRGNLEEVASVIQHILSHGLELNT 314
Query: 329 FDYNKFLHYFSNEE 342
YN LH + E
Sbjct: 315 VTYNTLLHSLCSHE 328
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/315 (17%), Positives = 128/315 (40%), Gaps = 57/315 (18%)
Query: 96 PDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKL 155
PD + Y +I C KG + A + M+ G PDV ++ +F +A++
Sbjct: 172 PDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRF 231
Query: 156 FETM---------------------------RLKRMDELGLS-------TYRLVIKWMCN 181
++ ++ ++++ + TY ++ + C
Sbjct: 232 WKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCR 291
Query: 182 KGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI----GVMDISV 237
+G + + V + + G++++ +T ++++ L + E +I++ + +
Sbjct: 292 RGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVIT 351
Query: 238 YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG------------ 285
Y+ LI GL K R A F +M+++ C P + TY +L G + + G
Sbjct: 352 YNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVL-GAMSKEGMVDDAIELLGLL 410
Query: 286 RKGTDP--LVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEG 343
+ P L+ ++++ + GL K G ++ ++ ++++ G+ ++ F
Sbjct: 411 KNTCCPPGLITYNSV-IDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRAN- 468
Query: 344 VLMFEEMGKKLREVG 358
+ EE G+ L+E
Sbjct: 469 --LVEEAGQVLKETS 481
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 139/329 (42%), Gaps = 45/329 (13%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRF--ATDRTFVIALRTLGGARELKKCVEVFHLMNSN 58
+++++G S+ L W+ L + + + + F I R A + F+ M
Sbjct: 108 LVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEF 167
Query: 59 GYGYNLETLNKVVDAMC----------------GYKLVEEAKYVVLKLKEWVK------- 95
G ++ L++++ ++C G+ +V AK + ++ W +
Sbjct: 168 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 227
Query: 96 -------------PDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMET 142
D + Y L+ C GD+ K++ M + G +PD + +
Sbjct: 228 RKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHA 287
Query: 143 LFKVNQGGEALKLFETMRLKRMDEL-GLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQ 201
A K+ + R+KR D + + T+ +IK +C + A + +EM ++G
Sbjct: 288 YCDAGDVHSAYKVLD--RMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGAN 345
Query: 202 IDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDISVYHGLIKGLLKLRRAGEATQV 257
D T S++ V A +++ R+ + D Y+ ++K L+++ R AT++
Sbjct: 346 PDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEI 405
Query: 258 FREMIKRGCEPTMHTYIMLLQGHLGRRGR 286
+ M +R PT+ TY +++ G + ++G+
Sbjct: 406 WEGMSERKFYPTVATYTVMIHGLVRKKGK 434
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 19/262 (7%)
Query: 27 ATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC-------GYKL 79
+ +T+ I +R R+ +VF M +L N ++DA+C GYK+
Sbjct: 206 PSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKM 265
Query: 80 VEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKM 139
+E + LK PD + I +CD GD+ A K+ + M P+V +
Sbjct: 266 FQEMGNLGLK------PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 140 METLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERG 199
++TL K + +A L + M +++ TY ++ + C+ +++A K+ M
Sbjct: 320 IKTLCKNEKVDDAYLLLDEM-IQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK 378
Query: 200 IQIDNLTLGSVVYGLLAKHRVREAYQI----VDRIGVMDISVYHGLIKGLLKLR-RAGEA 254
D T V+ L+ R A +I +R ++ Y +I GL++ + + EA
Sbjct: 379 CLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEA 438
Query: 255 TQVFREMIKRGCEPTMHTYIML 276
+ F MI G P T ML
Sbjct: 439 CRYFEMMIDEGIPPYSTTVEML 460
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 120/249 (48%), Gaps = 6/249 (2%)
Query: 29 DRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVL 88
+R+ ++ L R + C+E+F M +G + +L VV+ +C VE++K ++
Sbjct: 189 ERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIK 248
Query: 89 KLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVN 147
+ + +KP+ Y +I + + D + +M +G + +ME K
Sbjct: 249 EFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNG 308
Query: 148 QGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTL 207
+ +A KLF+ MR +R E + Y +I W C KG M +A +F+E+ E+G+ + T
Sbjct: 309 KMSDAEKLFDEMR-ERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTY 367
Query: 208 GSVVYGLLAKHRVREAYQIVDRIGVMDIS----VYHGLIKGLLKLRRAGEATQVFREMIK 263
G+++ G+ + A +++ + ++ V++ LI G + EA+ ++ M +
Sbjct: 368 GALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQ 427
Query: 264 RGCEPTMHT 272
+G + + T
Sbjct: 428 KGFQADVFT 436
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 122/252 (48%), Gaps = 15/252 (5%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKH 103
+K+ +F + G + T ++D +C + A+ ++ +++ + V V +
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
LI G+C KG + EAS I+++M +GF+ DV + ++ + EA + L R
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW-----LFR 459
Query: 164 MDELG--LST--YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHR 219
M E G LST Y +I C +G + +A+++F EM +G+Q + +T ++Y + +
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 220 VREAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIM 275
++EA ++ + D Y LI G EA ++F EM +G + TY +
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 276 LLQGHLGRRGRK 287
++ G L + G+
Sbjct: 580 MISG-LSKAGKS 590
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 51 VFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFC 109
++ +M G+ ++ T N + K +EAK + ++ E VK V Y +LI +C
Sbjct: 421 IYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYC 480
Query: 110 DKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGL 169
+G++ EA +++ M+ +G +P+ M+ K + EA KL M MD
Sbjct: 481 KEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSY 540
Query: 170 STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDR 229
TY +I C + +A ++F EM +G+ +++T ++ GL + EA+ + D
Sbjct: 541 -TYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDE 599
Query: 230 IG----VMDISVYHGLIKGL 245
+ +D VY LI +
Sbjct: 600 MKRKGYTIDNKVYTALIGSM 619
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 108/235 (45%), Gaps = 6/235 (2%)
Query: 50 EVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVK-PDGVCYKHLIRGF 108
++F M G N T ++ +C ++A+ + +++ PD V + L+ GF
Sbjct: 219 KMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGF 278
Query: 109 CDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELG 168
C G ++EA ++ L +GF + +++ LF+ + +A +L+ M LK+ +
Sbjct: 279 CKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANM-LKKNIKPD 337
Query: 169 LSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA----Y 224
+ Y ++I+ + G + A K+ M +GI D +V+ L + + E
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQL 397
Query: 225 QIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
++ + D + LI + + EA ++F E+ K GC P++ T+ L+ G
Sbjct: 398 EMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDG 452
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 143/337 (42%), Gaps = 62/337 (18%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
++D++ + DL+W+ L ++ + D F + + +K VE F M
Sbjct: 98 VIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFD 157
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASK 119
++ T N ++ M + EE +++ A
Sbjct: 158 CRPDVFTYNVILRVM----MREEVFFML-----------------------------AFA 184
Query: 120 IWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWM 179
++N M P++ +M+ L+K + +A K+F+ M + + TY ++I +
Sbjct: 185 VYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP-NRVTYTILISGL 243
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIV---DRIG-VMDI 235
C +G A+K+F EM+ G D++ +++ G R+ EA++++ ++ G V+ +
Sbjct: 244 CQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGL 303
Query: 236 SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNF 295
Y LI GL + RR +A +++ M+K+ +P + Y +L+Q
Sbjct: 304 RGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQ----------------- 346
Query: 296 DTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYN 332
GL K GK + +K + + ++G+ + YN
Sbjct: 347 ------GLSKAGKIEDALKLLSSMPSKGISPDTYCYN 377
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 119/267 (44%), Gaps = 9/267 (3%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRT-FVIALRTLGGARELKKCVEVFHLMNSNG 59
++D + ++R +EL +++ ++ D + I ++ L A +++ +++ M S G
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVK-PDGVCYKHLIRGFCDKGDLIEAS 118
+ N V+ A+CG L+EE + + L++ E PD + LI C G + EA
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGL---STYRLV 175
+I+ + G P V +++ L K + EA L M + R L L +
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRS 488
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDI 235
M G + +A + + G D ++ ++ G + A ++++ + + +
Sbjct: 489 FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548
Query: 236 S----VYHGLIKGLLKLRRAGEATQVF 258
S Y+ LI GL ++ R EA ++F
Sbjct: 549 SPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 95 KPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALK 154
PD V Y LI GFC GD+ A K+ N++ +G PD ++ L +V + EA K
Sbjct: 514 SPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFK 573
Query: 155 LFETMRLKRMDELGLSTYRLVIKWMCNK 182
LF R + YR ++ W C K
Sbjct: 574 LFYAKDDFRHSP---AVYRSLMTWSCRK 598
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 130/295 (44%), Gaps = 42/295 (14%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T+ L+ + L E+ M NG N T N +V C ++EA +V +
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 91 KEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
K+ V PD Y LI G C+ G + E ++ + M +PDV +++ F++
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 150 GEALKLFETMR---------------------------LKRMDEL----GLS----TYRL 174
EA KL E M +++ EL G S TY
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT 421
Query: 175 VIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD----RI 230
+IK G +S A ++ EM ++GI+++ +TL +++ L + ++ EA+ +++ R
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 231 GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG--HLGR 283
++D Y LI G + + +A +++ EM K PT+ T+ L+ G H G+
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGK 536
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 160/372 (43%), Gaps = 26/372 (6%)
Query: 11 IDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
+ +F +++ + T T +I L + + EVF M G N++T N +
Sbjct: 151 LQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVL 210
Query: 71 VDAMCGYKLVEEAKYVVLKL-KEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEG 128
V+ C +E+A ++ ++ E+ V PD V Y +++ KG L + ++ M G
Sbjct: 211 VNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNG 270
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQA 188
P+ ++ K+ EA ++ E M+ + L TY ++I +CN G M +
Sbjct: 271 LVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP-DLCTYNILINGLCNAGSMREG 329
Query: 189 QKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GVMDISVYHGL-IKG 244
++ + M+ +Q D +T +++ G EA ++++++ GV V H + +K
Sbjct: 330 LELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKW 389
Query: 245 LLKLRRAGEATQVFREMIK-RGCEPTMHTYIMLLQGHL---------------GRRGRKG 288
L K + T+ +E++ G P + TY L++ +L G++G K
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449
Query: 289 TDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFE 348
+ +TI + L K K E + RG V Y + F EE V
Sbjct: 450 NT--ITLNTI-LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKAL 506
Query: 349 EMGKKLREVGLV 360
EM ++++V +
Sbjct: 507 EMWDEMKKVKIT 518
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 115/307 (37%), Gaps = 85/307 (27%)
Query: 44 ELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYK 102
+L +E+ M G N TLN ++DA+C + ++EA ++ K D V Y
Sbjct: 431 DLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYG 490
Query: 103 HLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLK 162
LI GF + + +A ++W+ M P V
Sbjct: 491 TLIMGFFREEKVEKALEMWDEMKKVKITPTV----------------------------- 521
Query: 163 RMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVRE 222
ST+ +I +C+ G A + F+E+ E G+ D+ T S++ G + RV +
Sbjct: 522 -------STFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEK 574
Query: 223 AYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLG 282
A++ + E IK +P +T +LL G L
Sbjct: 575 AFEF-------------------------------YNESIKHSFKPDNYTCNILLNG-LC 602
Query: 283 RRGRKGTDPLVNF----------DTI----FVGGLVKVGKAREYIKYVERVMNRGLEVPR 328
+ G T+ +NF DT+ + K K +E + + +GLE R
Sbjct: 603 KEGM--TEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660
Query: 329 FDYNKFL 335
F YN F+
Sbjct: 661 FTYNSFI 667
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 171 TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI 230
TY ++K M KG +S +++ +M++ G+ + +T ++VYG ++EA+QIV+ +
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 231 G----VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR 286
+ D+ Y+ LI GL E ++ M +P + TY L
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL---------- 351
Query: 287 KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLM 346
+ G ++G + E K +E++ N G++ + +N L + EE
Sbjct: 352 -------------IDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKR-- 396
Query: 347 FEEMGKKLREVGLVDL 362
E + +K++E LVD+
Sbjct: 397 -EAVTRKVKE--LVDM 409
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 5/206 (2%)
Query: 78 KLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVE 137
+L+E K ++ V P+ V Y LI G C G L EA K+ N++ +GF P+
Sbjct: 269 QLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYN 328
Query: 138 KMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRE 197
++ K + + +K+ M +D TY + + C G S A+KV M
Sbjct: 329 TLINGYCKAKRVDDGMKILCVMSRDGVDG-DTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387
Query: 198 RGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI----GVMDISVYHGLIKGLLKLRRAGE 253
G+ D T ++ GL ++ +A ++ + V+ I Y+ +IKGL K + +
Sbjct: 388 CGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVED 447
Query: 254 ATQVFREMIKRGCEPTMHTYIMLLQG 279
A +F + +G P + TYI ++ G
Sbjct: 448 AWYLFCSLALKGVSPDVITYITMMIG 473
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 148/348 (42%), Gaps = 38/348 (10%)
Query: 49 VEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRG 107
+ +F + G ++L + ++D C + A + K+ K +P V + L+ G
Sbjct: 99 ISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNG 158
Query: 108 FCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDEL 167
FC EA + + + G+EP+V ++++L + Q AL + LK M ++
Sbjct: 159 FCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDV-----LKHMKKM 213
Query: 168 GLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSV--VYG-----LLA 216
G+ TY +I + + G + ++ +M GI D +T ++ VYG L A
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Query: 217 KHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIML 276
K + E Q R +I Y+ LI GL EA +V ++ +G P TY L
Sbjct: 274 KKQYNEMIQ---RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTL 330
Query: 277 LQGH------------LGRRGRKGTD-PLVNFDTIFVGGLVKVGKAREYIKYVERVMNRG 323
+ G+ L R G D ++T++ G + GK K + R+++ G
Sbjct: 331 INGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY-QGYCQAGKFSAAEKVLGRMVSCG 389
Query: 324 LEVPRFDYNKFLHYFSNE----EGVLMFEEMGKKLREVGLVDLADILE 367
+ + +N L + + ++ E++ K VG++ I++
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIK 437
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 9/231 (3%)
Query: 1 MLDVVGKSRNI----DLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMN 56
++DV GK + + E++ T + + L G E KK V +++
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKK---VLNVLV 316
Query: 57 SNGYGYNLETLNKVVDAMCGYKLVEEA-KYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLI 115
S G+ N T N +++ C K V++ K + + ++ V D Y L +G+C G
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLV 175
A K+ M G PD+ +++ L + G+AL E ++ K +G+ TY ++
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQ-KSKTVVGIITYNII 435
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI 226
IK +C + A +F + +G+ D +T +++ GL K REA+++
Sbjct: 436 IKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 12/228 (5%)
Query: 55 MNSNGYGY-NLETLNKVVDAMCGYKLVEEAKYVVLKL--KEWVKPDGVCYKHLIRGFCDK 111
M +G Y N T + ++D + + +EA + + KE + PD V + +I GFC
Sbjct: 222 MKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRA 281
Query: 112 GDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLK--RMDELGL 169
G++ A KI + M G P+V +M KV + EA + F+ ++ ++D +G
Sbjct: 282 GEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVG- 340
Query: 170 STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDR 229
Y ++ C G +A K+ EM+ + D LT ++ GL ++ R EA Q++D+
Sbjct: 341 --YTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQ 398
Query: 230 IGVMDISVYHGLIKGLLK-LRRAGE---ATQVFREMIKRGCEPTMHTY 273
G + + G + +L L GE A + M +RG P T+
Sbjct: 399 WGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATW 446
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 4/202 (1%)
Query: 16 ELLSD-IARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDA 73
EL D I++ + D TF + + A E+++ ++ M NG N+ + +++
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 74 MCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPD 132
C ++EAK ++K+ +K D V Y L+ FC G+ EA K+ M D
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRAD 372
Query: 133 VEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVF 192
++ L + EAL++ + + + L +YR+++ +C G + +A K
Sbjct: 373 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGV-HLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 193 EEMRERGIQIDNLTLGSVVYGL 214
M ERGI + T +V L
Sbjct: 432 SVMSERGIWPHHATWNELVVRL 453
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 126/299 (42%), Gaps = 53/299 (17%)
Query: 59 GYGYNLETLNKVVDAMCGYK-------LVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDK 111
G+ +N T + ++D + +K ++ + KY + +E + + +L+R F +
Sbjct: 84 GFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESL------FLNLMRHF-SR 136
Query: 112 GDLIE-ASKIWNLMADEG-FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGL 169
DL + +++NL+ +P + A+ + L GE + L + L LGL
Sbjct: 137 SDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLI---DSGE-VNLSRKLLLYAKHNLGL 192
Query: 170 ST----YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDN-LTLGSVVYGLLAKHRVREAY 224
+ +++K C G ++ A V EEM+ GI N +T +++ L A R +EA
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 225 QI----VDRIGVM-DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
++ + + G+ D ++ +I G + A ++ M K GC P ++ Y L+
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN- 311
Query: 280 HLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYF 338
G KVGK +E + + V GL++ Y ++ F
Sbjct: 312 ----------------------GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCF 348
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 168/390 (43%), Gaps = 30/390 (7%)
Query: 14 FWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDA 73
F+E RR+ + + TLG ++ +F + GYG + + ++ A
Sbjct: 218 FYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISA 277
Query: 74 MCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKG--DLIEASKIWNLMADEGFE 130
L EEA V +KE+ ++P+ V Y +I C KG + + +K ++ M G +
Sbjct: 278 YGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQ 336
Query: 131 PDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQK 190
PD ++ + A LF+ M +R+++ + +Y ++ +C G M A +
Sbjct: 337 PDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ-DVFSYNTLLDAICKGGQMDLAFE 395
Query: 191 VFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISV----YHGLIKGLL 246
+ +M + I + ++ +V+ G R EA + + + I++ Y+ L+
Sbjct: 396 ILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYT 455
Query: 247 KLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG-------------RKGTDP-L 292
K+ R+ EA + REM G + + TY LL G+ G++G R+ P L
Sbjct: 456 KVGRSEEALDILREMASVGIKKDVVTYNALLGGY-GKQGKYDEVKKVFTEMKREHVLPNL 514
Query: 293 VNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNE----EGVLMFE 348
+ + T+ + G K G +E ++ + GL Y+ + V + +
Sbjct: 515 LTYSTL-IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLID 573
Query: 349 EMGKKLREVGLVDLADILERYGQKMATRDR 378
EM K+ +V I++ +G + AT DR
Sbjct: 574 EMTKEGISPNVVTYNSIIDAFG-RSATMDR 602
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 94/213 (44%), Gaps = 3/213 (1%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
+LD + K +DL +E+L+ + +R + ++ + A + + +F M G
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEAS 118
+ + N ++ EEA ++ ++ +K D V Y L+ G+ +G E
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
K++ M E P++ +++ K EA+++F + + + Y +I
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL-RADVVLYSALIDA 558
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVV 211
+C G++ A + +EM + GI + +T S++
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 159/338 (47%), Gaps = 32/338 (9%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATD-RTFVIALRTLGGARELKKCVEVFHLMNSNG 59
ML + G++RN+D+ EL+S++ + D RT+ I + G A+++ K + VF M +G
Sbjct: 195 MLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSG 254
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVC-----YKHLIRGFC--DKG 112
+ + N ++ ++C + + L+ + + G+ YK L+ +K
Sbjct: 255 FELDATAYNIMIRSLC----IAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKV 310
Query: 113 DLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTY 172
D++++ I + M + +A ++++ + EAL+L ++ K M L +
Sbjct: 311 DVVQS--IADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMC-LDAKYF 367
Query: 173 RLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA---YQIVDR 229
+++K +C M A ++ + M+ R + N+ G ++ G L ++ V +A ++++ +
Sbjct: 368 EILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKK 426
Query: 230 IGVMD-ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRR---- 284
G +S Y +++ L KL++ + +F EMI+ G EP ++ GHLG+
Sbjct: 427 SGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAE 486
Query: 285 --------GRKGTDPLVNFDTIFVGGLVKVGKAREYIK 314
KG P +IFV L + + E IK
Sbjct: 487 AWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIK 524
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 119/269 (44%), Gaps = 27/269 (10%)
Query: 96 PDGVCYKHLIRGFCDKG--DLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
P +K LI C+K ++ EA++ + M GF PD E V+ + L +V +A
Sbjct: 746 PSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAK 805
Query: 154 KLFETMRLKRMDELGLS---TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSV 210
+++ ++G Y + I+ +C G + +A +D T GS+
Sbjct: 806 SCLDSL-----GKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSI 860
Query: 211 VYGLLAKHRVREAYQIVD---RIGVMD-ISVYHGLIKGLLKLRRAGEATQVFREMIKRGC 266
V+GLL + +++A V+ IG + VY LI K ++ + + ++M C
Sbjct: 861 VHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESC 920
Query: 267 EPTMHTYIMLLQGHLG------------RRGRKGTDPLVNFDTIFVGGLVKVGKAREYIK 314
EP++ TY ++ G++ +GT P + F+ L + K+ + +K
Sbjct: 921 EPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALK 980
Query: 315 YVERVMNRGLEVPRFDYNKFLHYFSNEEG 343
+ ++++G+ ++ + + Y N EG
Sbjct: 981 LLSEMLDKGIAPSTINF-RTVFYGLNREG 1008
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 119/269 (44%), Gaps = 5/269 (1%)
Query: 1 MLDVVGKSRNIDLFWELLSDIAR-RRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNG 59
+LD + KS +D+ + D+ R + F L++ + ++K+ +E+ + +
Sbjct: 300 LLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKE 359
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASK 119
+ + +V +C + +A +V +K D Y +I G+ + D+ +A +
Sbjct: 360 MCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALE 419
Query: 120 IWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWM 179
+ ++ G P V ++M+ LFK+ Q + LF M ++ ++ +V +
Sbjct: 420 QFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHL 479
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYH 239
+ +++A KVF M E+GI+ + V L R E +I +++ I +
Sbjct: 480 -GQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRD 538
Query: 240 GLIKGLL-KLRRAGEATQV--FREMIKRG 265
+ ++ + + GE ++ +E+ KR
Sbjct: 539 DIFSWVISSMEKNGEKEKIHLIKEIQKRS 567
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 19/241 (7%)
Query: 51 VFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVV-LKLKEWVKPDGVCYKHLIRGFC 109
V M G G ++ + N ++D +C ++ +AK +V L + V PD V Y L+ G+C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 110 DKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGL 169
G + A + M P+ ++ +L+K+ + EA +L L++M+E G
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEEL-----LRKMNEKGY 462
Query: 170 S----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQ 225
T +++ +C G + +A ++ + MR G LG+ GL+
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALG-NLGNSYIGLVDD-------S 514
Query: 226 IVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG 285
+++ + D+ Y L+ GL K R EA +F EM+ +P Y + + H ++G
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH-HFCKQG 573
Query: 286 R 286
+
Sbjct: 574 K 574
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 13/291 (4%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
+L+ K R ++ L D+ A TF + +R L + + E+F M G
Sbjct: 118 LLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG 177
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEAS 118
N T +V C L ++ ++ ++ + V P+ V Y ++ FC +G ++
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSE 237
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS-----TYR 173
K+ M +EG PD+ + L K + +A ++F M L + LGL TY
Sbjct: 238 KMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELD--EYLGLPRPNSITYN 295
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA----YQIVDR 229
L++K C G++ A+ +FE +RE + + GL+ + EA Q+ D+
Sbjct: 296 LMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDK 355
Query: 230 IGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
I Y+ L+ GL KL +A + M + G P TY LL G+
Sbjct: 356 GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGY 406
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 148/347 (42%), Gaps = 39/347 (11%)
Query: 5 VGKSRNIDLFWELLSDIARRR-FATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYN 63
VGK +D LL ++ R T I L +L + + E+ MN GYG +
Sbjct: 409 VGK---VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLD 465
Query: 64 LETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNL 123
T N +VD +CG +++A +V ++ + G G+L + L
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMR-------------VHGSAALGNL--GNSYIGL 510
Query: 124 MADEGFE----PDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWM 179
+ D E PD+ ++ L K + EA LF M +++ ++ Y + I
Sbjct: 511 VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVA-YNIFIHHF 569
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GVM-DI 235
C +G +S A +V ++M ++G T S++ GL K+++ E + ++D + G+ +I
Sbjct: 570 CKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNI 629
Query: 236 SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNF 295
Y+ I+ L + + +AT + EM+++ P + ++ L++ +
Sbjct: 630 CTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFET 689
Query: 296 DTIFVGG-----------LVKVGKAREYIKYVERVMNRGLEVPRFDY 331
G L+ G+ + + +E V++RG E+ F Y
Sbjct: 690 AVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLY 736
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 168/413 (40%), Gaps = 79/413 (19%)
Query: 8 SRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLET 66
S +D EL ++ + + TF I +R A K +E+ + M S G N
Sbjct: 160 SSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVI 219
Query: 67 LNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMA 125
N +V + C ++++ +V K++E + PD V + I C +G +++AS+I++ M
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Query: 126 DEGF----EPDVEAVEKMMETLFKVNQGGEALKLFETMR--------------------- 160
+ + P+ M++ KV +A LFE++R
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339
Query: 161 ---------LKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTL 207
LK+M + G+ +Y +++ +C GM+S A+ + M+ G+ D +T
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 208 GSVVYGLLAKHRVREAYQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIK 263
G +++G + +V A ++ + + + + L+ L K+ R EA ++ R+M +
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 264 RGCEPTMHTYIMLLQGHLGR----------RGRK--GTDPLVNFDTIFVG---------- 301
+G T +++ G G +G + G+ L N ++G
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 302 -------------GLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNE 341
GL K G+ E +M L+ YN F+H+F +
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 17/184 (9%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGD 113
M G N+ T N + +C + VE+A ++ ++ ++ + P+ +K+LI FC D
Sbjct: 620 MKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPD 679
Query: 114 LIEASKIWNLMADEGFEPDVEAVEK-------MMETLFKVNQGGEALKLFETMRLKRMDE 166
MA E FE V + M L Q +A +L E + L R E
Sbjct: 680 FD--------MAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAV-LDRGFE 730
Query: 167 LGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI 226
LG Y+ +++ +C K + A + +M +RG D L V+ GL +EA
Sbjct: 731 LGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSF 790
Query: 227 VDRI 230
D++
Sbjct: 791 ADKM 794
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 139/323 (43%), Gaps = 26/323 (8%)
Query: 42 ARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVC 100
A L+K + M G N+ T N ++ C VEEA ++ + + PD V
Sbjct: 290 ANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVS 349
Query: 101 YKHLIRGFCDKGDLIEASKIWNLMADE-GFEPDVEAVEKMMETLFKVNQGGEALKLFETM 159
Y ++ C + ++E + MA E G PD ++ L K + EAL +
Sbjct: 350 YYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDA 409
Query: 160 RLK--RMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERG-IQIDNLTLGSVVYGLLA 216
+ K R+D+LG Y ++ +C +G MS+A+ + EM +G D +T +VV G
Sbjct: 410 QEKGFRIDKLG---YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCR 466
Query: 217 KHRVREA---YQIVDRIGVMDISV-YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHT 272
V +A Q++ G +V Y L+ G+ + ++ EA ++ + P T
Sbjct: 467 LGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 526
Query: 273 YIMLLQGHLGRRGR-------------KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERV 319
Y +++ G L R G+ KG P + + L + G+ E K++E
Sbjct: 527 YSVIMHG-LRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEEC 585
Query: 320 MNRGLEVPRFDYNKFLHYFSNEE 342
+N+G + ++ +H F +
Sbjct: 586 LNKGCAINVVNFTTVIHGFCQND 608
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 127/286 (44%), Gaps = 7/286 (2%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRR-FATDRTFVIALRTLGGARELKKCVEVFHLMNSNG 59
ML+V+ K++ +L + RR + T F + + A +L+ ++V LM G
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEAS 118
NL N +D +E+A + +++ + P+ V Y +IRG+CD + EA
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
++ M +G PD + +M L K + E L + M + TY +I
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM 392
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI-----GVM 233
+ +A ++ +E+G +ID L ++V+ L + R+ EA +++ +
Sbjct: 393 LTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 452
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
D+ Y ++ G +L +A ++ + M G +P +Y LL G
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNG 498
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 118/265 (44%), Gaps = 42/265 (15%)
Query: 51 VFHLMNSNGYGYNLETL--NKVVDAMCGYKLVEEAKYVVLKL--KEWVKPDGVCYKHLIR 106
++ L ++ G+ ++ L + +V A+C + EAK ++ ++ K PD V Y ++
Sbjct: 403 LWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVN 462
Query: 107 GFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR------ 160
GFC G++ +A K+ +M G +P+ + ++ + + + EA ++
Sbjct: 463 GFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSP 522
Query: 161 -----------LKRMDEL-----------------GLSTYRLVIKWMCNKGMMSQAQKVF 192
L+R +L G L+++ +C G +A+K
Sbjct: 523 NSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFM 582
Query: 193 EEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKL 248
EE +G I+ + +V++G + A ++D + ++ D+ Y L+ L K
Sbjct: 583 EECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKK 642
Query: 249 RRAGEATQVFREMIKRGCEPTMHTY 273
R EAT++ ++M+ +G +PT TY
Sbjct: 643 GRIAEATELMKKMLHKGIDPTPVTY 667
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 32/270 (11%)
Query: 74 MCGYKLVEEAK---YVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
M GY +V + K V +LKE P V Y LI + G + +A ++ +M +EG
Sbjct: 456 MDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGV 515
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQ 189
+ +++ M+ K+ A +FE M +K + + Y +I C G M +A
Sbjct: 516 KHNLKTYSMMINGFVKLKDWANAFAVFEDM-VKEGMKPDVILYNNIISAFCGMGNMDRAI 574
Query: 190 KVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD---RIG-VMDISVYHGLIKGL 245
+ +EM++ + T +++G +R + ++ D R G V + ++GLI GL
Sbjct: 575 QTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL 634
Query: 246 LKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVK 305
++ R+ +A ++ EM G HTY ++QG+
Sbjct: 635 VEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY-----------------------AS 671
Query: 306 VGKAREYIKYVERVMNRGLEVPRFDYNKFL 335
VG + +Y R+ N GL+V F Y L
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 119/265 (44%), Gaps = 6/265 (2%)
Query: 24 RRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEA 83
R T RTF+ + + ++++ +EVF +M G + T N +++ + + +E+A
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 84 KYVVLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMET 142
++ ++ V + Y +++G+ GD +A + + + +EG + D+ E +++
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703
Query: 143 LFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQI 202
K + AL + + M + + Y ++I +G + +A + ++M++ G++
Sbjct: 704 CCKSGRMQSALAVTKEMSARNIPRNSF-VYNILIDGWARRGDVWEAADLIQQMKKEGVKP 762
Query: 203 DNLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVF 258
D T S + + A Q ++ + + +I Y LIKG + +A +
Sbjct: 763 DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCY 822
Query: 259 REMIKRGCEPTMHTYIMLLQGHLGR 283
EM G +P Y LL L R
Sbjct: 823 EEMKAMGIKPDKAVYHCLLTSLLSR 847
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 10/203 (4%)
Query: 27 ATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYV 86
A + T+ ++ + K E F + + G ++ T ++ A C ++ A V
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Query: 87 VLKLKEWVKP-DGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFK 145
++ P + Y LI G+ +GD+ EA+ + M EG +PD+ + K
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 146 VNQGGEALKLFETMRLKRMDELG----LSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQ 201
A T ++ M+ LG + TY +IK + +A +EEM+ GI+
Sbjct: 777 AGDMNRA-----TQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Query: 202 IDNLTLGSVVYGLLAKHRVREAY 224
D ++ LL++ + EAY
Sbjct: 832 PDKAVYHCLLTSLLSRASIAEAY 854
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 134/340 (39%), Gaps = 26/340 (7%)
Query: 22 ARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVE 81
AR T R + + R++ + + M G +L T + +V E
Sbjct: 337 ARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAE 396
Query: 82 EAKYVVLKLKEWVKP-DGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMM 140
A Y + K K + Y +I C ++ A + M +EG + + MM
Sbjct: 397 AADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMM 456
Query: 141 ETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMR 196
+ V + L +F KR+ E G + TY +I G +S+A +V M+
Sbjct: 457 DGYTMVADEKKGLVVF-----KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511
Query: 197 ERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GV-MDISVYHGLIKGLLKLRRAG 252
E G++ + T ++ G + A+ + + + G+ D+ +Y+ +I +
Sbjct: 512 EEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMD 571
Query: 253 EATQVFREMIKRGCEPTMHTYIMLLQGHLG----RRG--------RKGTDPLVNFDTIFV 300
A Q +EM K PT T++ ++ G+ RR R G P V+ +
Sbjct: 572 RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Query: 301 GGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN 340
GLV+ + + ++ ++ + G+ Y K + +++
Sbjct: 632 NGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 136/303 (44%), Gaps = 18/303 (5%)
Query: 44 ELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEA-KYVVLKLKEWVKPDGVCYK 102
+L + ++F MN + T N +VD C V+EA K ++ V P + Y
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYN 440
Query: 103 HLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLK 162
L++G+ G + +W +M G D + ++E LFK+ EA+KL+E + L
Sbjct: 441 ILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENV-LA 499
Query: 163 RMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVRE 222
R T ++I +C +++A+++ + + + T ++ +G ++E
Sbjct: 500 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Query: 223 AYQI---VDRIGVMD-ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQ 278
A+ + ++R G+ I +Y+ LI G K R + + E+ RG PT+ TY L+
Sbjct: 560 AFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALIT 619
Query: 279 G--HLGRRGR----------KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEV 326
G ++G + KG VN + L ++ K E ++++++ L +
Sbjct: 620 GWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLL 679
Query: 327 PRF 329
P +
Sbjct: 680 PGY 682
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 28/264 (10%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADE-GFEPDVEAVEKMMETLFKVNQGGEA 152
V PD ++ +C G++ +A G E +V ++ + G+
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMI---GDV 277
Query: 153 LKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLG 208
+ +RL M E G+S TY +IK C KG+M +A+ VFE ++E+ + D G
Sbjct: 278 EGMTRVLRL--MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 335
Query: 209 SVVYGLLAKHRVREAYQIVDR---IGV-MDISVYHGLIKGLLKLRRAGEATQVFREMIKR 264
++ G ++R+A ++ D IGV + ++ + LI G K + EA Q+F M
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 395
Query: 265 GCEPTMHTYIMLLQGHLGRRG-------------RKGTDPLVNFDTIFVGGLVKVGKARE 311
+P HTY L+ G+ R G +K P V I + G ++G +
Sbjct: 396 SLKPDHHTYNTLVDGYC-RAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454
Query: 312 YIKYVERVMNRGLEVPRFDYNKFL 335
+ + ++ RG+ + L
Sbjct: 455 VLSLWKMMLKRGVNADEISCSTLL 478
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 128/324 (39%), Gaps = 68/324 (20%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKH 103
LK+ V M G +E N ++ Y+ + + +V++L+ + P Y
Sbjct: 557 LKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGA 616
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETM---- 159
LI G+C+ G + +A M ++G +V K+ +LF++++ EA L + +
Sbjct: 617 LITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFD 676
Query: 160 -------RLKRMDELGLST--------------------------YRLVIKWMCNKGMMS 186
LK E +T Y + I +C G +
Sbjct: 677 LLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLE 736
Query: 187 QAQKVFEEM--RERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDISVYHG 240
A+K+F ++ +R I D T +++G + +A+ + D + + +I Y+
Sbjct: 737 DARKLFSDLLSSDRFIP-DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNA 795
Query: 241 LIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFV 300
LIKGL KL A ++ ++ ++G P TY +
Sbjct: 796 LIKGLCKLGNVDRAQRLLHKLPQKGITPNAITY-----------------------NTLI 832
Query: 301 GGLVKVGKAREYIKYVERVMNRGL 324
GLVK G E ++ E+++ +GL
Sbjct: 833 DGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Query: 91 KEWVKPDGVCYKHLIRGFCDKGDLIEASKIW-NLMADEGFEPDVEAVEKMMETLFKVNQG 149
K+ + P+ + Y I G C G L +A K++ +L++ + F PD ++
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDI 771
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
+A L + M LK + + TY +IK +C G + +AQ++ ++ ++GI + +T +
Sbjct: 772 NKAFTLRDEMALKGIIP-NIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNT 830
Query: 210 VVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKG 244
++ GL+ V EA ++ +++ + GL++G
Sbjct: 831 LIDGLVKSGNVAEAMRLKEKM------IEKGLVRG 859
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 13/248 (5%)
Query: 46 KKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWV----KPDGVCY 101
++ +VF M + G+ Y+ T N ++D Y K + L E V P V Y
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDV---YGKSHRPKEAMKVLNEMVLNGFSPSIVTY 352
Query: 102 KHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRL 161
LI + G L EA ++ N MA++G +PDV ++ + + A+ +FE MR
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 162 KRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSV--VYGLLA-KH 218
+ + T+ IK N+G ++ K+F+E+ G+ D +T ++ V+G
Sbjct: 413 AGC-KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 219 RVREAYQIVDRIG-VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLL 277
V ++ + R G V + ++ LI + +A V+R M+ G P + TY +L
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 278 QGHLGRRG 285
L R G
Sbjct: 532 AA-LARGG 538
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 128/305 (41%), Gaps = 42/305 (13%)
Query: 17 LLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC 75
+ ++ R F +R TF + ++ + V+ M G +L T N V+ A+
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 76 GYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGF-------------------------- 108
+ E+++ V+ ++++ KP+ + Y L+ +
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAV 595
Query: 109 --------CDKGDLI-EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETM 159
C K DL+ EA + ++ + + GF PD+ + M+ + +A + + M
Sbjct: 596 LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM 655
Query: 160 RLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHR 219
+ +R ++TY ++ +++++ E+ +GI+ D ++ +V+Y R
Sbjct: 656 K-ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 220 VREAYQIVDRIG----VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIM 275
+R+A +I + V D+ Y+ I EA V R MIK GC P +TY
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 276 LLQGH 280
++ G+
Sbjct: 775 IVDGY 779
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 119/265 (44%), Gaps = 15/265 (5%)
Query: 26 FATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAK 84
F+ D+ T+ L G + K+ ++V + M NG+ ++ T N ++ A +++EA
Sbjct: 310 FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 369
Query: 85 YVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETL 143
+ ++ E KPD Y L+ GF G + A I+ M + G +P++ ++
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY 429
Query: 144 FKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERG 199
+ E +K+F+ + + GLS T+ ++ GM S+ VF+EM+ G
Sbjct: 430 GNRGKFTEMMKIFDEINV-----CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 200 IQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GVM-DISVYHGLIKGLLKLRRAGEAT 255
+ T +++ +A + R+ GV D+S Y+ ++ L + ++
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 256 QVFREMIKRGCEPTMHTYIMLLQGH 280
+V EM C+P TY LL +
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAY 569
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 115/278 (41%), Gaps = 44/278 (15%)
Query: 97 DGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLF 156
D Y LI F + G EA ++ M ++G +P + ++ K+ +
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKI--- 263
Query: 157 ETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQ-AQKVFEEMRERGIQIDNLTLGSV- 210
T +++M G++ TY +I C +G + Q A +VFEEM+ G D +T ++
Sbjct: 264 -TSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
Query: 211 -VYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
VYG HR +EA ++++ + + I Y+ LI + EA ++ +M ++G
Sbjct: 322 DVYG--KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 266 CEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLE 325
+P + TY LL G + GK + E + N G +
Sbjct: 380 TKPDVFTYTTLLS-----------------------GFERAGKVESAMSIFEEMRNAGCK 416
Query: 326 VPRFDYNKFLHYFSNEEGVLMFEEMGKKLREVGLVDLA 363
+N F+ + N F EM K E+ + L+
Sbjct: 417 PNICTFNAFIKMYGNRGK---FTEMMKIFDEINVCGLS 451
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 16/284 (5%)
Query: 11 IDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNK 69
+D EL + +A + D T+ L A +++ + +F M + G N+ T N
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 70 VVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEG 128
+ E + ++ + PD V + L+ F G E S ++ M G
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELG----LSTYRLVIKWMCNKGM 184
F P+ E ++ + +A+ ++ +RM + G LSTY V+ + GM
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVY-----RRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 185 MSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKG 244
Q++KV EM + + + LT S+++ + + + + + I L+K
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 245 LL----KLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRR 284
L+ K EA + F E+ +RG P + T ++ + GRR
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY-GRR 642
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 90 LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
L + ++PD V Y L+ GFC GDL+ A I + M G PD +++ + G
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR---G 428
Query: 150 GEALKLFETMRLKRMDELGLSTYRL----VIKWMCNKGMMSQAQKVFEEMRERGIQIDNL 205
G+ E K MD+ G+ R+ ++ MC +G + A++ EM GI+ D++
Sbjct: 429 GDVETALEIR--KEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDV 486
Query: 206 TLGSVVYGLLAKHRVREAYQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQVFREM 261
T ++ K + ++++ + V + Y+ L+ GL KL + A + M
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAM 546
Query: 262 IKRGCEPTMHTYIMLLQGH 280
+ G P TY LL+GH
Sbjct: 547 LNIGVVPDDITYNTLLEGH 565
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 133/328 (40%), Gaps = 51/328 (15%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEA 117
G+ N+ N +++ C + +A+ V ++ K ++P V + LI G+C G+L E
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETM------------------ 159
++ + M PDV ++ L K N+ A LF+ M
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 160 ------------RLKRMDELGLST----YRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
++M GL Y ++ C G + A+ + + M RG++ D
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 204 NLTLGSVVYGLLAKHRVREAYQI---VDRIGV-MDISVYHGLIKGLLKLRRAGEATQVFR 259
+T +++ G V A +I +D+ G+ +D + L+ G+ K R +A + R
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 260 EMIKRGCEPTMHTYIMLLQGH------------LGRRGRKGTDPLVNFDTIFVGGLVKVG 307
EM++ G +P TY M++ L G P V + + GL K+G
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Query: 308 KAREYIKYVERVMNRGLEVPRFDYNKFL 335
+ + ++ ++N G+ YN L
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 146/373 (39%), Gaps = 47/373 (12%)
Query: 9 RNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNS-----NGYGYN 63
R+I F++ +S RF + FV+A R L + + L+ S +
Sbjct: 99 RSIFAFFKFISSQPGFRFTVETYFVLA-RFLAVHEMFTEAQSLIELVVSRKGKNSASSVF 157
Query: 64 LETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNL 123
+ + V MCG+ LV+ L+ + D G + +A + + L
Sbjct: 158 ISLVEMRVTPMCGF-LVDA---------------------LMITYTDLGFIPDAIQCFRL 195
Query: 124 MADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKG 183
F+ + +++ + K+N G + + L L + + +++ C +G
Sbjct: 196 SRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEI-LDAGFPLNVYVFNILMNKFCKEG 254
Query: 184 MMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI----GVMDISVYH 239
+S AQKVF+E+ +R +Q ++ +++ G + E +++ ++ D+ Y
Sbjct: 255 NISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYS 314
Query: 240 GLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG-------------R 286
LI L K + A +F EM KRG P + L+ GH R G
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH-SRNGEIDLMKESYQKMLS 373
Query: 287 KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLM 346
KG P + V G K G V+ ++ RGL + Y + F V
Sbjct: 374 KGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVET 433
Query: 347 FEEMGKKLREVGL 359
E+ K++ + G+
Sbjct: 434 ALEIRKEMDQNGI 446
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 128/278 (46%), Gaps = 2/278 (0%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGY 60
M+ V+G + ++ W L+ D+ T + + + A + + + F +M+ +
Sbjct: 161 MIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKH 220
Query: 61 GYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCD-KGDLIEASK 119
E ++ A+C + +E+A+ +L K+ D + ++ G+C+ D+ EA +
Sbjct: 221 TPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKR 280
Query: 120 IWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWM 179
IW M + P+ ++ M+ KV ++L+L++ M+ KR G+ Y ++ +
Sbjct: 281 IWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMK-KRGLAPGIEVYNSLVYVL 339
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYH 239
+ +A K+ +++ E G++ D++T S++ L ++ A ++ + ++S
Sbjct: 340 TREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTV 399
Query: 240 GLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLL 277
L+ + +V +M PT T++++L
Sbjct: 400 DTFHAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLIL 437
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 108/244 (44%), Gaps = 19/244 (7%)
Query: 49 VEVFHLMNSNGYGYNLETLNKVVDAMCG-YKLVEEAKYVVLKLKEW-VKPDGVCYKHLIR 106
E F L + + ++E N +++ C + V EAK + ++ + + P+ Y H+I
Sbjct: 243 AEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMIS 302
Query: 107 GFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDE 166
F G+L ++ ++++ M G P +E ++ L + + EA+KL +K+++E
Sbjct: 303 CFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKL-----MKKLNE 357
Query: 167 LGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVRE 222
GL TY +I+ +C G + A+ V M + T + L +
Sbjct: 358 EGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTF----HAFLEAVNFEK 413
Query: 223 AYQIVDRIGVMDI----SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQ 278
+++ ++ + D+ + ++ L K ++ A +++ EM + Y+ +Q
Sbjct: 414 TLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQ 473
Query: 279 GHLG 282
G L
Sbjct: 474 GLLS 477
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 141/333 (42%), Gaps = 27/333 (8%)
Query: 49 VEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEA-KYVVLKLKEWVKPDGVCYKHLIRG 107
+E + M NG N+ + + +VDA C ++++A K+ V + + P+ Y LI
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 108 FCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDEL 167
C G+L +A ++ N M G E +V +++ L + EA +LF +MD
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF-----GKMDTA 466
Query: 168 G----LSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA 223
G L++Y +I M +A ++ E++ RGI+ D L G+ ++GL + ++ A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 224 YQIVDRIGVMDIS----VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
+++ + I +Y L+ K E + EM + E T+ T+ +L+ G
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 280 ------------HLGRRGRK-GTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEV 326
+ R G T + GL K + E+++ +GL
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646
Query: 327 PRFDYNKFLHYFSNEEGVLMFEEMGKKLREVGL 359
R Y + + VL + K+ E+G+
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 132/284 (46%), Gaps = 16/284 (5%)
Query: 5 VGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNL 64
+GK+ ++ F++ + R T T+ I + + +++ +F M G +
Sbjct: 240 LGKTDDVKRFFKDMIGAGAR--PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDT 297
Query: 65 ETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNL 123
T N ++D +++ ++K+ +PD + Y LI FC G L + +
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYRE 357
Query: 124 MADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWM 179
M G +P+V + +++ K +A+K + MR +GL TY +I
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR-----RVGLVPNEYTYTSLIDAN 412
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI---VDRIGVM-DI 235
C G +S A ++ EM + G++ + +T +++ GL R++EA ++ +D GV+ ++
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 236 SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
+ Y+ LI G +K + A ++ E+ RG +P + Y + G
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 516
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 107/244 (43%), Gaps = 5/244 (2%)
Query: 42 ARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVC 100
A+ + + +E+ + + G +L + +C + +E AK V+ ++KE +K + +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 101 YKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR 160
Y L+ + G+ E + + M + E V +++ L K +A+ F +
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 161 LKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRV 220
+ + + +I +C + A +FE+M ++G+ D S++ G + V
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 221 REAYQIVDR---IGV-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIML 276
EA + D+ IG+ +D+ Y L+ GL + +A EMI G P I +
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISV 724
Query: 277 LQGH 280
L+ H
Sbjct: 725 LKKH 728
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 131/342 (38%), Gaps = 41/342 (11%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVC-------------- 100
M NG+ +++E+ V + ++ +A V LKE V C
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSV---LKEMVLSKADCDVFDVLWSTRNVCV 189
Query: 101 -----YKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKL 155
+ L D G L EA + ++ M P + ++ K+ + + +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 156 FETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLL 215
F+ M + + TY ++I MC +G + A+ +FEEM+ RG+ D +T S++ G
Sbjct: 250 FKDM-IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 216 AKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMH 271
R+ + + + M D+ Y+ LI K + + +REM G +P +
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 272 TYIMLLQGHLGRRG-------------RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVER 318
+Y L+ + G R G P T + K+G + +
Sbjct: 369 SYSTLVDA-FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 319 VMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKKLREVGLV 360
++ G+E Y + + E + EE+ K+ G++
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 469
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 24/282 (8%)
Query: 11 IDLFWELLSDIARRRFATDRTFVIALRTL-GGARELKKCVE---VFHLMNSNGYGYNLET 66
ID ELLS +A A D V++ TL G ++ K VE +F + + ++ T
Sbjct: 359 IDDARELLSSMA----APD---VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411
Query: 67 LNKVVDAMCGYKLVEEAKYVVLKLKE-----WVKPDGVCYKHLIRGFCDKGDLIEASKIW 121
N ++D +C +E A+ +LKE + PD + Y L++GF G+L A++++
Sbjct: 412 YNTLIDGLCESGNLEGAQ----RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVY 467
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCN 181
+ M +G +PD A ++ +A +L E M L+ Y + I +C
Sbjct: 468 DEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK 527
Query: 182 KGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI----GVMDISV 237
G + +A + ++ G+ D++T +V+ G L + + A + D + +
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587
Query: 238 YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
Y LI G K R +A Q EM KRG P + T+ LL G
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYG 629
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 139/350 (39%), Gaps = 57/350 (16%)
Query: 30 RTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK 89
R I L+ L +R + K V+ M +G + T N ++D+ +E + L+
Sbjct: 204 RNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLE 263
Query: 90 LKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQ 148
+K ++ V Y LI GF G + EA + M GF + ++E K
Sbjct: 264 MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL 323
Query: 149 GGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQK------------------ 190
+A + + M L STY + I +C+ G + A++
Sbjct: 324 FDDAWGVTDEM-LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMH 382
Query: 191 -------------VFEEMRERGIQIDNLTLGSVVYGLL------AKHRVREAYQIVDRIG 231
+F+++R I +T +++ GL R++E ++ ++
Sbjct: 383 GYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE--EMTTQLI 440
Query: 232 VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRK---- 287
D+ Y L+KG +K AT+V+ EM+++G +P + Y G L R G
Sbjct: 441 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL-RLGDSDKAF 499
Query: 288 -------GTD---PLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVP 327
TD P + + + GL KVG + I++ ++ GL VP
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL-VP 548
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 122/289 (42%), Gaps = 26/289 (8%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
V P+ V LI +C KG +IEA + M D+G D + +M LFK ++ +A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
++F MR K + + +Y ++I G M +A +F+EM E G+ + + ++ G
Sbjct: 613 EIFREMRGKGIAP-DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 214 LLAKHRVREAYQIVDRIGVMDIS----VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPT 269
+ +A +++D + V + Y +I G K EA ++F EM +G P
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 270 MHTYIMLLQGH------------LGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVE 317
Y L+ G G + F+ + + + K GK + +
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL-INWVFKFGKTELKTEVLN 790
Query: 318 RVMNRGLEVPRF------DYNKFLHYFSNEEGVLMFEEMGKKLREVGLV 360
R+M+ + RF YN + Y E + +E+ +++ L+
Sbjct: 791 RLMDGSFD--RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 146/352 (41%), Gaps = 34/352 (9%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE---WVKPDGVCY 101
++K +F M ++G + +++ C K V + +++++K+ + P Y
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP--YTY 420
Query: 102 KHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRL 161
+++G C GDL A I M G P+V +++T + ++ G+A+++ L
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV-----L 475
Query: 162 KRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAK 217
K M E G++ Y +I + M +A+ EM E G++ + T G+ + G +
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 218 HRVREAYQIVDRI---GVMDISVY-HGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTY 273
A + V + GV+ V GLI K + EA +R M+ +G TY
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595
Query: 274 IMLLQG-----------HLGRRGR-KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMN 321
+L+ G + R R KG P V + + G K+G ++ + ++
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 322 RGLEVPRFDYNKFLHYFSN----EEGVLMFEEMGKKLREVGLVDLADILERY 369
GL YN L F E+ + +EM K V I++ Y
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 162/393 (41%), Gaps = 63/393 (16%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRR----------------------------FATDRTF 32
+LD + + +DLFW++ + R F T++ F
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF 251
Query: 33 VIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE 92
A + GA +LK+ + L+ Y Y++ ++D +C K +E+AK +++++
Sbjct: 252 RTATLNVDGALKLKESMICKGLVPLK-YTYDV-----LIDGLCKIKRLEDAKSLLVEMDS 305
Query: 93 W-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGE 151
V D Y LI G + A + + M G + + + K +
Sbjct: 306 LGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEK 365
Query: 152 ALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVV 211
A LF+ M + Y +I+ C + + Q ++ EM++R I I T G+VV
Sbjct: 366 AKALFDGMIASGLIPQA-QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 212 YGLLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCE 267
G+ + + AY IV + ++ +Y LIK L+ R G+A +V +EM ++G
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 268 PTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVP 327
P + Y L+ G L + R + +AR ++ VE V N GL+
Sbjct: 485 PDIFCYNSLIIG-LSKAKR-------------------MDEARSFL--VEMVEN-GLKPN 521
Query: 328 RFDYNKFLHYFSNEEGVLMFEEMGKKLREVGLV 360
F Y F+ + ++ K++RE G++
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 117/268 (43%), Gaps = 22/268 (8%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
+ PD Y LI GF G++ +AS I++ M +EG P+V ++ + + +A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
+L + M +K + + TY +I C G +++A ++F+EM+ +G+ D+ ++V G
Sbjct: 683 ELLDEMSVKGLHPNAV-TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 214 LLAKHRVREAYQI--VDRIGVMDISV-YHGLIKGLLKLRRAGEATQVFREMIK----RGC 266
+ V A I ++ G + ++ LI + K + T+V ++ R
Sbjct: 742 CCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 267 EPTMHTYIMLLQGHLGRRGR-------------KGTDPLVNFDTIFVGGLVKVGKAREYI 313
+P TY +++ +L + G P V T + G K+G+ E
Sbjct: 802 KPNDVTYNIMID-YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 314 KYVERVMNRGLEVPRFDYNKFLHYFSNE 341
+ + G+E Y+ ++ F E
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 115/274 (41%), Gaps = 17/274 (6%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKH 103
++K +F M G N+ N ++ C +E+AK ++ ++ + + P+ V Y
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
+I G+C GDL EA ++++ M +G PD +++ ++N A+ +F T K+
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN--KK 760
Query: 164 MDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL-TLGSVVYGLLAKHRVRE 222
+ + +I W+ G +V + + D V Y ++ + +E
Sbjct: 761 GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG--SFDRFGKPNDVTYNIMIDYLCKE 818
Query: 223 A---------YQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTY 273
+Q+ + + + Y L+ G K+ R E VF E I G EP Y
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878
Query: 274 IMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVG 307
+++ L + G T LV D +F V G
Sbjct: 879 SVIINAFL-KEGMT-TKALVLVDQMFAKNAVDDG 910
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 163/386 (42%), Gaps = 39/386 (10%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
M+ +G+++ +LL ++ R + T+ + + G A L + + VF+ M G
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 429
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEAS 118
+ T ++D ++ A + +++ + PD Y +I G L A
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 489
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
K++ M D+G P++ MM+ K ALKL+ M+ + + TY +V++
Sbjct: 490 KLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV-TYSIVMEV 548
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAK--------HRVREAYQIVDRI 230
+ + G + +A+ VF EM+++ N VYGLL + + YQ +
Sbjct: 549 LGHCGYLEEAEAVFTEMQQK-----NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603
Query: 231 GV-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGT 289
G+ ++ + L+ L++ + EA ++ + M+ G P++ TY +LL T
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC--------CT 655
Query: 290 DPLVNFDTIFVGGLVKVG--KAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMF 347
D D F G L+ A ++ + G V R N FL +E+
Sbjct: 656 DGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENV-RNHANNFLDLMHSED----- 709
Query: 348 EEMGKKLREVGLVD-LADILERYGQK 372
+ + GLVD + D L + GQK
Sbjct: 710 -----RESKRGLVDAVVDFLHKSGQK 730
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 88 LKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVN 147
LK + K DG Y ++ +K+ + M +G +P+ +++ + + N
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 148 QGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
EA+ +F +M E G TY +I G + A +++ M+ G+ D
Sbjct: 414 YLNEAMNVF-----NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 204 NLTLGSVVYGLLAKHRVREAYQI----VDRIGVMDISVYHGLIKGLLKLRRAGEATQVFR 259
T ++ L + A+++ VD+ ++ Y+ ++ K R A +++R
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 260 EMIKRGCEPTMHTYIMLLQ--GHLG 282
+M G EP TY ++++ GH G
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCG 553
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 15/289 (5%)
Query: 2 LDVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLM-NSNGY 60
+D G+ ++ E++S + A +T A+ L A K+ + F M N G
Sbjct: 150 VDYFGRRKDFKGMLEIISKY--KGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGL 207
Query: 61 GYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKI 120
+ E+L VV +C A+ +V + PD LI G+C L EA+++
Sbjct: 208 KRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRL 267
Query: 121 WNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR--LKRMDELGLS----TYRL 174
M+ GFE +A M++ + K+ + + KL + L M+ G+ T+ +
Sbjct: 268 AGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNV 327
Query: 175 VIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG--- 231
+I +C +A +F M E G Q D T ++ L R+ E +++D++
Sbjct: 328 LINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAG 387
Query: 232 ---VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLL 277
+++ Y+G +K L + R A VF+ M GC+P + TY +L+
Sbjct: 388 YGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLM 436
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGD 113
M G N ET N +++ +C + EEA + ++ EW +PD Y LIR
Sbjct: 313 MEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAAR 372
Query: 114 LIEASKIWNLMADEGFEPDVEAVE--KMMETLFKVNQGGEALKLFETMRLKRMDELGLST 171
+ E ++ + M G+ + E ++ L + + A+ +F++M+ + G+ T
Sbjct: 373 IGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGC-KPGIKT 431
Query: 172 YRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
Y L++ MC +++A +++E ++GI +
Sbjct: 432 YDLLMGKMCANNQLTRANGLYKEAAKKGIAVS 463
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 90 LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
+K ++PD V L+ GFC + +A + M G + DV +++TL K
Sbjct: 5 MKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLV 64
Query: 150 GEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL 205
AL++ LKRM + G+S TY +I +C G ++ A++ EM + I + +
Sbjct: 65 VPALEV-----LKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVI 119
Query: 206 TLGSVVYGLLAK---HRVREAYQIVDRIGV-MDISVYHGLIKGLLKLRRAGEATQVFREM 261
T +++ + +V Y+++ ++ + ++ Y LI GL R EA ++ M
Sbjct: 120 TFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM 179
Query: 262 IKRGCEPTMHTYIMLLQG 279
I +GC P + TY L G
Sbjct: 180 ISKGCTPNVVTYSTLANG 197
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 9/302 (2%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRT-LGGARELKKCVEVFHLMNSNG 59
++D + K+R + E+L + R + + +L T L + L H M+S
Sbjct: 54 LIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK 113
Query: 60 YGYNLETLNKVVDAMCGY-KLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
N+ T + ++DA KL + + ++ + P+ Y LI G C + EA
Sbjct: 114 INPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAI 173
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
K+ +LM +G P+V + FK ++ + +KL + M + + +S L IK
Sbjct: 174 KMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL-IKG 232
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI----GVMD 234
G + A VF M G+ + + V+ GL A V +A + + +D
Sbjct: 233 YFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLD 292
Query: 235 ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG-RKGTDPLV 293
I Y +I G+ K EA +F ++ + EP Y +++ L R G R D L
Sbjct: 293 IITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI-AELNRAGMRTEADALN 351
Query: 294 NF 295
F
Sbjct: 352 RF 353
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 30/234 (12%)
Query: 128 GFEPDVEAVEKMMETLFKVNQGGEALKL---FETMRLKRMDELGLSTYRLVIKWMCNKGM 184
G EPD+ ++ N +A+ + E M +KR ++ + T ++I +C +
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKR--DVVVDT--ILIDTLCKNRL 63
Query: 185 MSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMD-------ISV 237
+ A +V + M++RGI + +T S++ GL R+ +A + R+ MD +
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAER---RLHEMDSKKINPNVIT 120
Query: 238 YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG------------HLGRRG 285
+ LI K + + V++ MI+ +P + TY L+ G L
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 286 RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLH-YF 338
KG P V + G K + + IK ++ + RG+ N + YF
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 234
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 162/386 (41%), Gaps = 39/386 (10%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
M+ +G+++ +LL ++ R + T+ + + G A L + + VF+ M G
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 429
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEAS 118
+ T ++D ++ A + +++ + PD Y +I G L A
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 489
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
K++ M D+G P++ MM+ K ALKL+ M+ E TY +V++
Sbjct: 490 KLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF-EPDKVTYSIVMEV 548
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAK--------HRVREAYQIVDRI 230
+ + G + +A+ VF EM+++ N VYGLL + + YQ +
Sbjct: 549 LGHCGYLEEAEAVFTEMQQK-----NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603
Query: 231 GV-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGT 289
G+ ++ + L+ L++ + EA ++ + M+ G P++ TY +LL T
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC--------CT 655
Query: 290 DPLVNFDTIFVGGLVKVG--KAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMF 347
D D F G L+ A ++ + G V R N FL +E+
Sbjct: 656 DGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENV-RNHANNFLDLMHSED----- 709
Query: 348 EEMGKKLREVGLVD-LADILERYGQK 372
+ + GLVD + D L + GQK
Sbjct: 710 -----RESKRGLVDAVVDFLHKSGQK 730
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 88 LKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVN 147
LK + K DG Y ++ +K+ + M +G +P+ +++ + + N
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 148 QGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
EA+ +F +M E G TY +I G + A +++ M+ G+ D
Sbjct: 414 YLNEAMNVF-----NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 204 NLTLGSVVYGLLAKHRVREAYQI----VDRIGVMDISVYHGLIKGLLKLRRAGEATQVFR 259
T ++ L + A+++ VD+ ++ Y+ ++ K R A +++R
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 260 EMIKRGCEPTMHTYIMLLQ--GHLG 282
+M G EP TY ++++ GH G
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCG 553
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 162/386 (41%), Gaps = 39/386 (10%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
M+ +G+++ +LL ++ R + T+ + + G A L + + VF+ M G
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 429
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEAS 118
+ T ++D ++ A + +++ + PD Y +I G L A
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 489
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
K++ M D+G P++ MM+ K ALKL+ M+ E TY +V++
Sbjct: 490 KLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF-EPDKVTYSIVMEV 548
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAK--------HRVREAYQIVDRI 230
+ + G + +A+ VF EM+++ N VYGLL + + YQ +
Sbjct: 549 LGHCGYLEEAEAVFTEMQQK-----NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603
Query: 231 GV-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGT 289
G+ ++ + L+ L++ + EA ++ + M+ G P++ TY +LL T
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC--------CT 655
Query: 290 DPLVNFDTIFVGGLVKVG--KAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMF 347
D D F G L+ A ++ + G V R N FL +E+
Sbjct: 656 DGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENV-RNHANNFLDLMHSED----- 709
Query: 348 EEMGKKLREVGLVD-LADILERYGQK 372
+ + GLVD + D L + GQK
Sbjct: 710 -----RESKRGLVDAVVDFLHKSGQK 730
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 88 LKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVN 147
LK + K DG Y ++ +K+ + M +G +P+ +++ + + N
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 148 QGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
EA+ +F +M E G TY +I G + A +++ M+ G+ D
Sbjct: 414 YLNEAMNVF-----NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 204 NLTLGSVVYGLLAKHRVREAYQI----VDRIGVMDISVYHGLIKGLLKLRRAGEATQVFR 259
T ++ L + A+++ VD+ ++ Y+ ++ K R A +++R
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 260 EMIKRGCEPTMHTYIMLLQ--GHLG 282
+M G EP TY ++++ GH G
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCG 553
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 124/288 (43%), Gaps = 46/288 (15%)
Query: 1 MLDVVGKSRNIDLFWELLSDIA---RRRFATDRTFVIALRTLGG-ARELKKCVEVFHLMN 56
M++ G+++ D E++ I R RF ++ F +R G A + + +E+ M
Sbjct: 101 MINKFGQAKMYDEIEEVMRTIKLEKRCRF-SEEFFYNLMRIYGNLAGRINRAIEILFGMP 159
Query: 57 SNGYGYNLETLNKVVDAMCGYKLVEEA-KYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLI 115
G + ++ N +++ + KL +E K V K V+ D C LI+G C+ G+L
Sbjct: 160 DFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLE 219
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLV 175
A ++ + + P+V T+ +
Sbjct: 220 AALQLLDEFPQQKSRPNV------------------------------------MTFSPL 243
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV--- 232
I+ CNKG +A K+ E M + I+ D +T ++ GL K RV E +++R+ V
Sbjct: 244 IRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGC 303
Query: 233 -MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
+ Y ++ GLL +R EA ++ +MI G P+ +Y ++ G
Sbjct: 304 EPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLG 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Query: 26 FATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKY 85
+ + ++F L L A+ + ++F G + LN ++ +C +E A
Sbjct: 164 WPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQ 223
Query: 86 VVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLF 144
++ + + +P+ + + LIRGFC+KG EA K+ M E EPD ++ L
Sbjct: 224 LLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLR 283
Query: 145 KVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDN 204
K + E + L E M++K E TY+ V+ + +K +A+++ +M G++
Sbjct: 284 KKGRVEEGIDLLERMKVKGC-EPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSF 342
Query: 205 LTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLL 246
L+ +V GL E +V+ V+ V HG + L
Sbjct: 343 LSYKKMVLGLC------ETKSVVEMDWVLRQMVNHGFVPKTL 378
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 124 MADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKG 183
M D G P ++ ++ L E K+F + K E+ ++IK +C G
Sbjct: 158 MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAP-KLGVEIDACCLNILIKGLCESG 216
Query: 184 MMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYH 239
+ A ++ +E ++ + + +T ++ G K + EA+++++R+ D ++
Sbjct: 217 NLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFN 276
Query: 240 GLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRR 284
LI GL K R E + M +GCEP TY +L G L ++
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKK 321
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 42/255 (16%)
Query: 66 TLNKVVDAMCGYKLVEEA-KYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEA------- 117
T N V+ +C + L +EA +++ +K + PD V Y LI GFC G+ + A
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI 222
Query: 118 ------------SKIWNLMADE---------GFEPDVEAVEKMMETLFKVNQGGEALKLF 156
S +NL A E GF+PDV ++ L K GG+ L+
Sbjct: 223 SELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCK---GGKVLE-- 277
Query: 157 ETMRLKRMDELGL----STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVY 212
+ L+ M+E+ + TY ++ + + A ++ +M RGI +D + ++
Sbjct: 278 GGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMD 337
Query: 213 GLLAKHRVREAYQ----IVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEP 268
GL +REA + +++ V ++ Y L+ GL K A + +M+++ P
Sbjct: 338 GLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIP 397
Query: 269 TMHTYIMLLQGHLGR 283
+ TY ++ G++ +
Sbjct: 398 NVVTYSSMINGYVKK 412
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 118/294 (40%), Gaps = 37/294 (12%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
+KP + ++ C+ G + EA I N M P++ ++T K +
Sbjct: 604 IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIF 663
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
K ET+ L +L Y +I +C GM +A V +M RG D +T S+++G
Sbjct: 664 KTHETL-LSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG 722
Query: 214 LLAKHRVREA---YQIVDRIGVM-DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPT 269
VR+A Y ++ G+ +++ Y+ +I+GL E + EM RG P
Sbjct: 723 YFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPD 782
Query: 270 MHTYIMLLQGHLGRRGRKGT------------DPLVNFDTIFVGGLVKVGK---AREYIK 314
TY L+ G KG+ P + + + VGK ARE +K
Sbjct: 783 DFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLK 842
Query: 315 YVER-----------VMNRGL----EVPRFDYNKFLHYFSNEEGVL--MFEEMG 351
+ + M GL P ++NK Y + +G+L M EE G
Sbjct: 843 EMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKG 896
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 148/326 (45%), Gaps = 28/326 (8%)
Query: 17 LLSDIARRRFATDRT-FVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC 75
L S + R D + + + L A +L++ + F ++ + N+ T +VD +C
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 375
Query: 76 GYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVE 134
+ A++++ + L++ V P+ V Y +I G+ KG L EA + M D+ P+
Sbjct: 376 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 435
Query: 135 AVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNK----GMMSQAQK 190
+++ LFK + A++L + MRL +G+ ++ + N G + + +
Sbjct: 436 TYGTVIDGLFKAGKEEMAIELSKEMRL-----IGVEENNYILDALVNHLKRIGRIKEVKG 490
Query: 191 VFEEMRERGIQIDNLTLGSVV----YGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLL 246
+ ++M +G+ +D + S++ G + + A ++ +R D+ Y+ LI G+L
Sbjct: 491 LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGML 550
Query: 247 KLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH------------LGRRGRKGTDPLVN 294
K + G A ++ M ++G EP + T+ +++ + G P +
Sbjct: 551 KFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLM 609
Query: 295 FDTIFVGGLVKVGKAREYIKYVERVM 320
I VG L + GK E I + ++M
Sbjct: 610 SCNIVVGMLCENGKMEEAIHILNQMM 635
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLI--EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGE 151
V PD + LI F G L+ + S I++ M G PDV A+ ++ + KV +
Sbjct: 89 VVPDSRLWNSLIHQFNVNG-LVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSF 147
Query: 152 ALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVV 211
A+ L R+ + TY VI +C G+ +A + EM + GI D ++ +++
Sbjct: 148 AISLLR----NRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLI 203
Query: 212 YGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMH 271
G A +VD I +++ + L+ L EA +R+M+ G +P +
Sbjct: 204 DGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVV 260
Query: 272 TY 273
T+
Sbjct: 261 TF 262
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 128/287 (44%), Gaps = 39/287 (13%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T I L L +++K E+ + G N N ++D C + A+ + +
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 91 -KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEA-------------V 136
K+ +KPD + Y LIR FC+ G++ A K N M +G P VE
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 137 EKMMETLFKVNQGG----------------EALKLFETMRLKR-MDELGLST----YRLV 175
+K + L ++ G + KL E +KR M++ G+S Y ++
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI---VDRIGV 232
I C+KG + A + +EM ++GI+++ +T +++ GL ++ EA + + R G+
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 233 -MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQ 278
D+ Y+ LI G ++ EM + G +PT+ TY +L+
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 142/330 (43%), Gaps = 35/330 (10%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVV-LK 89
TF I + + + V+ +G N T + +++A+C +E+A+ ++ +
Sbjct: 321 TFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGRE 380
Query: 90 LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
+ + + P+ V Y +I G+C KGDL+ A M +G +PD A ++ ++ +
Sbjct: 381 MAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEM 440
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
A K M+LK + + TY ++I K + + +EM + G + ++ G+
Sbjct: 441 ENAEKEVNKMKLKGVSP-SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGT 499
Query: 210 VVYGLLAKHRVREAYQIV-----DRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKR 264
++ L ++ EA QIV DR + +Y+ LI G + +A + +EM+K+
Sbjct: 500 LINCLCKGSKLLEA-QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558
Query: 265 GCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGL 324
G E + TY + GL GK E + + +GL
Sbjct: 559 GIELNLVTY-----------------------NTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 325 EVPRFDYNKFLHYF----SNEEGVLMFEEM 350
+ F YN + + + + + ++EEM
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 10/231 (4%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEA-KYVVLKLKEWVKPDGVCYKHLIRGFCDKGD 113
M G + N ++D C +E+A ++ LK+ ++ + V Y LI G G
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 114 LIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYR 173
L EA + ++ +G +PDV ++ + L+E M+ + L TY
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT-LKTYH 638
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY----QIVDR 229
L+I +C K + +++F EM ++ D L V++ + +A+ Q++++
Sbjct: 639 LLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694
Query: 230 IGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
+D + Y+ LI G LK+ + E + EM R EP TY ++++GH
Sbjct: 695 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGH 745
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 133/315 (42%), Gaps = 31/315 (9%)
Query: 10 NIDLFWELL-SDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLN 68
I++F +L SD +F + A++ ++ K +E+F+ M + ++ N
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKL----SDVGKGLELFNRMKHDRIYPSVFIYN 218
Query: 69 KVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADE 127
++D +C K + +A+ + + L + P + Y LI G+C G+ ++ K+ M +
Sbjct: 219 VLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD 278
Query: 128 GFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKG 183
EP + +++ LFK +A + LK M +LG T+ ++ +
Sbjct: 279 HIEPSLITFNTLLKGLFKAGMVEDAENV-----LKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 184 MMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDISVYH 239
A V+E + G++++ T ++ L + ++ +A +I+ R V + +Y+
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 240 GLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLL------------QGHLGRRGRK 287
+I G + A M K+G +P Y L+ + + + K
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453
Query: 288 GTDPLVNFDTIFVGG 302
G P V I +GG
Sbjct: 454 GVSPSVETYNILIGG 468
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 100/216 (46%), Gaps = 5/216 (2%)
Query: 16 ELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAM 74
+LL +I+R+ D T+ + G A +++C+ ++ M +G L+T + ++ ++
Sbjct: 585 DLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SL 643
Query: 75 CGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVE 134
C + +E + + ++ +KPD + Y ++ + GD+ +A + M ++ D
Sbjct: 644 CTKEGIELTERLFGEMS--LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKT 701
Query: 135 AVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEE 194
++ KV + E L + M + M E TY +++K C A + E
Sbjct: 702 TYNSLILGQLKVGKLCEVRSLIDEMNAREM-EPEADTYNIIVKGHCEVKDYMSAYVWYRE 760
Query: 195 MRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI 230
M+E+G +D +V GL + R +EA ++ +
Sbjct: 761 MQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 47/254 (18%)
Query: 70 VVDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEG 128
++D++C Y+ A +V +K + +KP Y +I G C G + A ++ ++
Sbjct: 313 MIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFE 372
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLK-------------------------- 162
F P + +ME+L K G+A + E M K
Sbjct: 373 FFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEIL 432
Query: 163 -----------RMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRE-RGIQIDNLTLGSV 210
R DE L+T VI +C G + A KV ++M + D +TL +V
Sbjct: 433 NVLVSMLQGDCRPDEYTLNT---VINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTV 489
Query: 211 VYGLLAKHRVREAYQIVDRIGVMD-----ISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
+ GLLA+ R EA +++R+ + + Y+ +I+GL KL + EA VF ++ K
Sbjct: 490 MCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKAS 549
Query: 266 CEPTMHTYIMLLQG 279
TY +++ G
Sbjct: 550 VTADSTTYAIIIDG 563
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 5/193 (2%)
Query: 86 VVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF-EPDVEAVEKMMETLF 144
+V L+ +PD +I G C G + +A K+ + M F PD + +M L
Sbjct: 435 LVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLL 494
Query: 145 KVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDN 204
+ EAL + + + + G+ Y VI+ + +A VF ++ + + D+
Sbjct: 495 AQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADS 554
Query: 205 LTLGSVVYGLLAKHRVREAYQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQVFRE 260
T ++ GL ++V A + D + G D VY +KGL + +A +
Sbjct: 555 TTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYD 614
Query: 261 MIKRGCEPTMHTY 273
+ G P + Y
Sbjct: 615 LADSGAIPNVVCY 627
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 116/249 (46%), Gaps = 14/249 (5%)
Query: 44 ELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGV---- 99
E+ V + M NG N+ T +++ +C +++A L++++ +K GV
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQA----LEMRDEMKNKGVKLDI 654
Query: 100 -CYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFET 158
Y LI GFC + ++ AS +++ + +EG P ++ + AL L++
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714
Query: 159 MRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKH 218
M LK L TY +I + G + A +++ EM+ G+ D + +V GL K
Sbjct: 715 M-LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773
Query: 219 RVREAYQIVDRIGVMDIS----VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYI 274
+ + ++ + + +++ +Y+ +I G + EA ++ EM+ +G P T+
Sbjct: 774 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 833
Query: 275 MLLQGHLGR 283
+L+ G +G
Sbjct: 834 ILVSGQVGN 842
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 123/292 (42%), Gaps = 21/292 (7%)
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASK 119
Y ++ K +D L+ E +K K+ P Y +I +G++ +A +
Sbjct: 271 YSLAVQACCKTLDLAMANSLLRE-----MKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325
Query: 120 IWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWM 179
+ + M +G +V A ++ K N AL LF+ M K T+ ++I+W
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKME-KEGPSPNSVTFSVLIEWF 384
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDR---IGVMDIS 236
G M +A + +++M G+ + +++ G L + EA ++ D G+ ++
Sbjct: 385 RKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVF 444
Query: 237 VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG----------- 285
V + ++ L K + EAT++ +M RG P + +Y ++ GH ++
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504
Query: 286 -RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLH 336
KG P +I + G + + ++ V + + +EV Y ++
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIIN 556
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 134/345 (38%), Gaps = 54/345 (15%)
Query: 47 KCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLI 105
+ E+ M S G G N+ + N V+ C K ++ A+ V L++ +KP+ Y LI
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILI 520
Query: 106 RGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETM------ 159
G D A ++ N M E + + ++ L KV Q +A +L M
Sbjct: 521 DGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRL 580
Query: 160 ---------------RLKRMDEL----------GLS----TYRLVIKWMCNKGMMSQAQK 190
+ MD G+S TY ++ +C M QA +
Sbjct: 581 CVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALE 640
Query: 191 VFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GV-MDISVYHGLIKGLL 246
+ +EM+ +G+++D G+++ G + + A + + G+ +Y+ LI G
Sbjct: 641 MRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFR 700
Query: 247 KLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL------------GRRGRKGTDPLVN 294
L A ++++M+K G + TY L+ G L G P
Sbjct: 701 NLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEI 760
Query: 295 FDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFL--HY 337
T+ V GL K G+ + +K E + + YN + HY
Sbjct: 761 IYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHY 805
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 120/287 (41%), Gaps = 20/287 (6%)
Query: 67 LNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMA 125
+N+ + A+ + EAK + ++ V D V + L+R + EA ++ +
Sbjct: 201 VNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAI 260
Query: 126 DEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMM 185
+ G EPD ++ K A L M+ K++ TY VI +G M
Sbjct: 261 ERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNM 320
Query: 186 SQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GVMDISV-YHGL 241
A ++ +EM GI ++ + S++ G + + A + D++ G SV + L
Sbjct: 321 DDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVL 380
Query: 242 IKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVG 301
I+ K +A + +++M G P++ ++QG L +G+K + L FD F
Sbjct: 381 IEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL--KGQKHEEALKLFDESFET 438
Query: 302 GLVKV-------------GKAREYIKYVERVMNRGLEVPRFDYNKFL 335
GL V GK E + + ++ +RG+ YN +
Sbjct: 439 GLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM 485
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 119/331 (35%), Gaps = 55/331 (16%)
Query: 96 PDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKL 155
P Y LI+G G + EA + M +G PDV + +M L KV + E +
Sbjct: 301 PTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNV 360
Query: 156 FETMRLKRMDELGLS-----------------------------------TYRLVIKWMC 180
F M + R +S TY ++I C
Sbjct: 361 FSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYC 420
Query: 181 NKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIV----DRIGVMDIS 236
+ +A + EEM E+G S++ L R A ++ + G +
Sbjct: 421 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSR 480
Query: 237 VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH------------LGRR 284
VY +IK K + EA +F EM +G P ++ Y L+ G L +
Sbjct: 481 VYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM 540
Query: 285 GRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN---- 340
G +N I + G + G R I+ E + + G++ YN L F++
Sbjct: 541 EENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMF 600
Query: 341 EEGVLMFEEMGKKLREVGLVDLADILERYGQ 371
EE M EM K E + + IL+ G
Sbjct: 601 EEAARMMREMKDKGFEYDAITYSSILDAVGN 631
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 118/275 (42%), Gaps = 10/275 (3%)
Query: 15 WELLSDIARRRFATDRTFVIA--LRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVD 72
+ + ++ R + + V++ ++ LG A+ + K + VF+ T N V+
Sbjct: 146 YRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVIL 205
Query: 73 AMCGYKLVEEAKYVVLKLKEW--VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFE 130
+ E+ V ++ PD + Y LI + G A ++++ M D +
Sbjct: 206 MLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQ 265
Query: 131 PDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQK 190
P + ++ FKV + +AL LFE M+ + TY +IK + G + +A
Sbjct: 266 PTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPT-VYTYTELIKGLGKAGRVDEAYG 324
Query: 191 VFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLL 246
+++M G+ D + L +++ L RV E + +G+ + Y+ +IK L
Sbjct: 325 FYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALF 384
Query: 247 KLR-RAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
+ + E + F +M P+ TY +L+ G+
Sbjct: 385 ESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGY 419
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 91/213 (42%), Gaps = 38/213 (17%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFA--TDRTFVIALRTLGGARELKKCVEVFHLMNSN 58
+++ +GK++ + EL ++ + F + R + + ++ G +L + V++F+ M +
Sbjct: 450 LINALGKAKRYEAANELFKEL-KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
G G PD Y L+ G G + EA+
Sbjct: 509 GSG----------------------------------PDVYAYNALMSGMVKAGMINEAN 534
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
+ M + G D+ + ++ + A+++FET++ + G+ TY ++
Sbjct: 535 SLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGV-TYNTLLGC 593
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVV 211
+ GM +A ++ EM+++G + D +T S++
Sbjct: 594 FAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 20/194 (10%)
Query: 136 VEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEM 195
+ ++++ L + +AL +F + ++ STY VI + +G + +V+ EM
Sbjct: 165 LSELVKALGRAKMVSKALSVFYQAKGRKCKPTS-STYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 196 RERG-IQIDNLTLGSVVYGLLAKHRVREAYQIVDRI--GVMDIS--VYHGLIKGLLKLRR 250
G D +T +++ R A ++ D + M + +Y L+ K+ +
Sbjct: 224 CNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGK 283
Query: 251 AGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG-------------RKGTDPLVNFDT 297
+A +F EM + GC PT++TY L++G LG+ G R G P V F
Sbjct: 284 VEKALDLFEEMKRAGCSPTVYTYTELIKG-LGKAGRVDEAYGFYKDMLRDGLTPDVVFLN 342
Query: 298 IFVGGLVKVGKARE 311
+ L KVG+ E
Sbjct: 343 NLMNILGKVGRVEE 356
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 159/365 (43%), Gaps = 27/365 (7%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLM---- 55
+L +G++ +I +L+ + + D T I + TL +R + + +EVF M
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 56 --NSNGYGYNLETLNKVVDAMCGYKLVEEAK--YVVLKLKEWVKPDGVCYKHLIRGFCDK 111
+ N + N ++D +C ++EA+ V +KL+E P+ V Y LI G+C
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
Query: 112 GDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLST 171
G L A ++ + M ++ +P+V V ++ + + + A+ F M K + + T
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME-KEGVKGNVVT 478
Query: 172 YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG 231
Y +I C+ + +A +E+M E G D +++ GL R +A ++V+++
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 232 ----VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEP---TMHTYIMLLQGH---- 280
+D+ Y+ LI A + ++ +M K G +P T +T I H
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 281 -----LGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERV-MNRGLEVPRFDYNKF 334
+ + G DP V + VG+ E +K + + ++ + YN
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 335 LHYFS 339
++ FS
Sbjct: 659 INAFS 663
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 129/301 (42%), Gaps = 38/301 (12%)
Query: 86 VVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLM----ADEG--FEPDVEAVEK 138
+VLK+ E ++PD V LI C + EA +++ M D+G + D
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNT 375
Query: 139 MMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRER 198
+++ L KV + EA +L M+L+ TY +I C G + A++V M+E
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 199 GIQIDNLTLGSVVYGLLAKHRVREA---YQIVDRIGVM-DISVYHGLIKGLLKLRRAGEA 254
I+ + +T+ ++V G+ H + A + +++ GV ++ Y LI + +A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 255 TQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIK 314
+ +M++ GC P Y L + GL +V + + I+
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYAL-----------------------ISGLCQVRRDHDAIR 532
Query: 315 YVERVMNRGLEVPRFDYNKFLHYF---SNEEGVL-MFEEMGKKLREVGLVDLADILERYG 370
VE++ G + YN + F +N E V M +M K+ ++ + ++ +G
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 371 Q 371
+
Sbjct: 593 K 593
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 116/261 (44%), Gaps = 21/261 (8%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T++ + ++K + + M G + + ++ +C + +A VV KL
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 91 KEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD---EGFEPDVEAVEKMMETLFKV 146
KE D + Y LI FCDK + A K++ ++ D EG +PD ++ K
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNN---AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 147 NQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLT 206
++ E MR +D ++TY VI C+ G + +A K+F++M G+ +
Sbjct: 595 KDFESVERMMEQMREDGLDP-TVTTYGAVIDAYCSVGELDEALKLFKDM---GLH-SKVN 649
Query: 207 LGSVVYGLLAKHRVR-----EAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQV 257
+V+Y +L + +A + + + + ++ Y+ L K L + + ++
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 258 FREMIKRGCEPTMHTYIMLLQ 278
EM+++ CEP T +L++
Sbjct: 710 MDEMVEQSCEPNQITMEILME 730
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 159/365 (43%), Gaps = 27/365 (7%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLM---- 55
+L +G++ +I +L+ + + D T I + TL +R + + +EVF M
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 56 --NSNGYGYNLETLNKVVDAMCGYKLVEEAK--YVVLKLKEWVKPDGVCYKHLIRGFCDK 111
+ N + N ++D +C ++EA+ V +KL+E P+ V Y LI G+C
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
Query: 112 GDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLST 171
G L A ++ + M ++ +P+V V ++ + + + A+ F M K + + T
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME-KEGVKGNVVT 478
Query: 172 YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG 231
Y +I C+ + +A +E+M E G D +++ GL R +A ++V+++
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 232 ----VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEP---TMHTYIMLLQGH---- 280
+D+ Y+ LI A + ++ +M K G +P T +T I H
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 281 -----LGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERV-MNRGLEVPRFDYNKF 334
+ + G DP V + VG+ E +K + + ++ + YN
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 335 LHYFS 339
++ FS
Sbjct: 659 INAFS 663
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 129/301 (42%), Gaps = 38/301 (12%)
Query: 86 VVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLM----ADEG--FEPDVEAVEK 138
+VLK+ E ++PD V LI C + EA +++ M D+G + D
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNT 375
Query: 139 MMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRER 198
+++ L KV + EA +L M+L+ TY +I C G + A++V M+E
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 199 GIQIDNLTLGSVVYGLLAKHRVREA---YQIVDRIGVM-DISVYHGLIKGLLKLRRAGEA 254
I+ + +T+ ++V G+ H + A + +++ GV ++ Y LI + +A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 255 TQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIK 314
+ +M++ GC P Y L + GL +V + + I+
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYAL-----------------------ISGLCQVRRDHDAIR 532
Query: 315 YVERVMNRGLEVPRFDYNKFLHYF---SNEEGVL-MFEEMGKKLREVGLVDLADILERYG 370
VE++ G + YN + F +N E V M +M K+ ++ + ++ +G
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 371 Q 371
+
Sbjct: 593 K 593
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 99/242 (40%), Gaps = 11/242 (4%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKH 103
L V F M G N+ T ++ A C VE+A Y K+ E PD Y
Sbjct: 457 LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYA 516
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRL-- 161
LI G C +A ++ + + GF D+ A ++ N + ++ M
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Query: 162 KRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVR 221
K+ D + TY +I + +++ E+MRE G+ T G+V+ + +
Sbjct: 577 KKPDSI---TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 222 EAYQIVDRIGVM-----DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIML 276
EA ++ +G+ + +Y+ LI KL G+A + EM + P + TY L
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Query: 277 LQ 278
+
Sbjct: 694 FK 695
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 43 RELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEA-----KYVVLKLKEWVKPD 97
R ++ +EV M N N ++D + + EA ++ V + P
Sbjct: 299 RRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCE----SGPT 354
Query: 98 GVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFE 157
V Y L++ FC GDL ASKI +M G +P + K N+ E + L+
Sbjct: 355 IVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLY- 413
Query: 158 TMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
++ E G S TY L++K +C G +S A +V +EM+ RGI D LT +++
Sbjct: 414 ----FKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHL 469
Query: 214 LLAKHRVREAYQIVD 228
L + EA++ D
Sbjct: 470 LCRLEMLEEAFEEFD 484
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 149/376 (39%), Gaps = 63/376 (16%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARR----RFATDRTFVIALRTLGGARELKKCVEVFHLMN 56
+++ + K+R ++ W L+ D R + TF++ +R A +++ + F
Sbjct: 141 VVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFAR 200
Query: 57 SN----GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-----KEWVKPDGVCYKHLIRG 107
S L L ++DA+C V EA + ++ WV P + L+ G
Sbjct: 201 SYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWV-PSVRIFNILLNG 259
Query: 108 FCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRM--- 164
+ L +A K+W M +P V ++E ++ + A+++ E M++ M
Sbjct: 260 WFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEIN 319
Query: 165 --------DELG-----------------------LSTYRLVIKWMCNKGMMSQAQKVFE 193
D LG + TY ++K C G + A K+ +
Sbjct: 320 FMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILK 379
Query: 194 EMRERGIQIDNLTLGSVVYGLLAKHRVREA-----YQIVDRIGVMDISVYHGLIKGLLKL 248
M RG+ T + +KH E +++++ D YH ++K L +
Sbjct: 380 MMMTRGVDPTTTTYNHF-FKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCED 438
Query: 249 RRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGK 308
+ A QV +EM RG +P + T ML+ HL R + FD G++
Sbjct: 439 GKLSLAMQVNKEMKNRGIDPDLLTTTMLI--HLLCRLEMLEEAFEEFDNAVRRGIIP--- 493
Query: 309 AREYIKYVERVMNRGL 324
+YI + ++++ GL
Sbjct: 494 --QYITF--KMIDNGL 505
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 11/279 (3%)
Query: 7 KSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLET 66
K+R +D FWEL ++ F ++R + +R L ++ + E+ G
Sbjct: 192 KARKLDRFWELHKEMVESEFDSERIRCL-IRALCDGGDVSEGYELLKQGLKQGLDPGQYV 250
Query: 67 LNKVVDAMC---GYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNL 123
K++ C Y + E + ++ + P Y+ +I+G C +EA I+
Sbjct: 251 YAKLISGFCEIGNYACMSEVLHTMIAWNHF--PSMYIYQKIIKGLCMNKKQLEAYCIFKN 308
Query: 124 MADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKG 183
+ D+G+ PD M+ + G A KL+ M K M + Y ++I +G
Sbjct: 309 LKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFA-YNVMIHGHFKRG 367
Query: 184 MMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDIS----VYH 239
+S + + EM G L+ +++ G + + EA++I + ++ Y+
Sbjct: 368 EISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYN 427
Query: 240 GLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQ 278
LIKG K + + ++++E+ G +P+ Y L++
Sbjct: 428 ALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVR 466
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 106/271 (39%), Gaps = 50/271 (18%)
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
LIR CD GD+ E ++ +G +P K++ ++ ++ TM +
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTM-IAW 277
Query: 164 MDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA 223
+ Y+ +IK +C +A +F+ ++++G D +
Sbjct: 278 NHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRV------------------ 319
Query: 224 YQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLG- 282
VY +I+G + G A +++ EMIK+G P Y +++ GH
Sbjct: 320 -------------VYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKR 366
Query: 283 --------------RRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPR 328
R G GT +++ +T+ + G GK+ E + + + G+
Sbjct: 367 GEISLVEAFYNEMLRNGYGGT--MLSCNTM-IKGFCSHGKSDEAFEIFKNMSETGVTPNA 423
Query: 329 FDYNKFLHYFSNEEGVLMFEEMGKKLREVGL 359
YN + F E V ++ K+L+ +GL
Sbjct: 424 ITYNALIKGFCKENKVEKGLKLYKELKALGL 454
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 6/233 (2%)
Query: 36 LRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVK 95
L L A LKK + V LM S+G + +V+ +C V A +V K+++
Sbjct: 113 LYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGY 172
Query: 96 P-DGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALK 154
P + V Y L+RG C G L ++ + + +G P+ ++E +K EA+K
Sbjct: 173 PSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVK 232
Query: 155 LFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGL 214
L + + +K E L +Y +++ C +G A +F E+ +G + + ++ ++ L
Sbjct: 233 LLDEIIVKG-GEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCL 291
Query: 215 LAKHRVREAYQIVDRIGVMD----ISVYHGLIKGLLKLRRAGEATQVFREMIK 263
R EA ++ + D + Y+ LI L R +A QV +EM K
Sbjct: 292 CCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSK 344
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 13/192 (6%)
Query: 95 KPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALK 154
KP+ L+ C L +A ++ LM G PD A ++ L K G A++
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 155 LFETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSV 210
L E +M++ G TY +++ +C G ++Q+ + E + ++G+ + T +
Sbjct: 163 LVE-----KMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFL 217
Query: 211 VYGLLAKHRVREAYQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGC 266
+ + EA +++D I G ++ Y+ L+ G K R +A +FRE+ +G
Sbjct: 218 LEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGF 277
Query: 267 EPTMHTYIMLLQ 278
+ + +Y +LL+
Sbjct: 278 KANVVSYNILLR 289
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 89/181 (49%), Gaps = 6/181 (3%)
Query: 110 DKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGL 169
D+ +L ++ + G +P+V +++ L K N+ +A+++ E M +
Sbjct: 83 DEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIP-DA 141
Query: 170 STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDR 229
S Y ++ +C +G + A ++ E+M + G + +T ++V GL + ++ Q V+R
Sbjct: 142 SAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVER 201
Query: 230 IGVMDIS----VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG 285
+ ++ Y L++ K R EA ++ E+I +G EP + +Y +LL G + G
Sbjct: 202 LMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTG-FCKEG 260
Query: 286 R 286
R
Sbjct: 261 R 261
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 43/291 (14%)
Query: 1 MLDVVGKSRNIDLFWELLSDIAR--RRFATDRTFVIALRTLGGARELKKCVEVF-HLMNS 57
ML ++G++R D WELL + R R + RT + L + +++ VE F
Sbjct: 114 MLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRL 173
Query: 58 NGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEA 117
++ N ++ +C K + +A+ V LK +PD + L+ G+ EA
Sbjct: 174 VPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW---KSSEEA 230
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
+ M +G +PDV +++ K + +A KL + MR + + + TY VI
Sbjct: 231 EAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMR-EEEETPDVITYTTVIG 289
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISV 237
+ G +A++V +EM+E G D++
Sbjct: 290 GLGLIGQPDKAREVLKEMKEYGC-------------------------------YPDVAA 318
Query: 238 YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTY-----IMLLQGHLGR 283
Y+ I+ RR G+A ++ EM+K+G P TY ++ L LGR
Sbjct: 319 YNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGR 369
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 158/365 (43%), Gaps = 27/365 (7%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLM---- 55
+L +G++ +I +L+ + + D T I + TL +R + + +EVF M
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKR 359
Query: 56 --NSNGYGYNLETLNKVVDAMCGYKLVEEAK--YVVLKLKEWVKPDGVCYKHLIRGFCDK 111
+ N + N ++D +C ++EA+ V +KL+E P+ V Y LI G+C
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRA 419
Query: 112 GDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLST 171
G L A ++ + M ++ +P+V V ++ + + + A+ F M K + + T
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME-KEGVKGNVVT 478
Query: 172 YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG 231
Y +I C+ + +A +E+M E G D +++ GL R +A ++V+++
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 232 ----VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEP---TMHTYIMLLQGH---- 280
+D+ Y+ LI + ++ +M K G +P T +T I H
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 281 -----LGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERV-MNRGLEVPRFDYNKF 334
+ + G DP V + VG+ E +K + + ++ + YN
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 335 LHYFS 339
++ FS
Sbjct: 659 INAFS 663
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 129/301 (42%), Gaps = 38/301 (12%)
Query: 86 VVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLM----ADEG--FEPDVEAVEK 138
+VLK+ E ++PD V LI C + EA +++ M D+G + D
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNT 375
Query: 139 MMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRER 198
+++ L KV + EA +L M+L+ TY +I C G + A++V M+E
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 199 GIQIDNLTLGSVVYGLLAKHRVREA---YQIVDRIGVM-DISVYHGLIKGLLKLRRAGEA 254
I+ + +T+ ++V G+ H + A + +++ GV ++ Y LI + +A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 255 TQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIK 314
+ +M++ GC P Y L + GL +V + + I+
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYAL-----------------------ISGLCQVRRDHDAIR 532
Query: 315 YVERVMNRGLEVPRFDYNKFLHYF---SNEEGVL-MFEEMGKKLREVGLVDLADILERYG 370
VE++ G + YN + F +N E V M +M K+ ++ + ++ +G
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 371 Q 371
+
Sbjct: 593 K 593
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 15/258 (5%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T++ + ++K + + M G + + ++ +C + +A VV KL
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 91 KEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
KE D + Y LI FCDK + + ++ M EG +PD ++ K
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
++ E MR +D ++TY VI C+ G + +A K+F++M G+ + +
Sbjct: 598 ESVERMMEQMREDGLDP-TVTTYGAVIDAYCSVGELDEALKLFKDM---GLH-SKVNPNT 652
Query: 210 VVYGLLAKHRVR-----EAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQVFRE 260
V+Y +L + +A + + + + ++ Y+ L K L + + ++ E
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Query: 261 MIKRGCEPTMHTYIMLLQ 278
M+++ CEP T +L++
Sbjct: 713 MVEQSCEPNQITMEILME 730
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 126/312 (40%), Gaps = 28/312 (8%)
Query: 54 LMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKG 112
+M G N+ N ++ A C K ++ A+ + + L++ ++P+ Y LI GF
Sbjct: 474 MMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNK 533
Query: 113 DLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTY 172
D A + N M FE + ++ L KV Q +A ++ + + ++ + ++Y
Sbjct: 534 DEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSY 593
Query: 173 RLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV 232
+I G A + + EM E G + +T S++ G +R+ A ++ +
Sbjct: 594 NSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKS 653
Query: 233 M----DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKG 288
M D+ Y LI G K A +F E+ + G P + Y L
Sbjct: 654 MELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSL------------ 701
Query: 289 TDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFE 348
+ G +GK I ++++N G+ F Y + + + +
Sbjct: 702 -----------ISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLAS 750
Query: 349 EMGKKLREVGLV 360
++ +L ++G+V
Sbjct: 751 DLYSELLDLGIV 762
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 117/277 (42%), Gaps = 37/277 (13%)
Query: 9 RNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETL 67
+N+DL + S++ + + T+ I + ++ + +V + MN++ + N
Sbjct: 498 KNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIY 557
Query: 68 NKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVC--YKHLIRGFCDKGDLIEASKIWNLMA 125
N +++ +C +AK ++ L + + C Y +I GF GD A + + M+
Sbjct: 558 NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMS 617
Query: 126 DEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMD-ELGLSTYRLVIKWMCNKGM 184
+ G P+V ++ K N+ AL++ T +K M+ +L L Y +I C K
Sbjct: 618 ENGKSPNVVTFTSLINGFCKSNRMDLALEM--THEMKSMELKLDLPAYGALIDGFCKKND 675
Query: 185 MSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKG 244
M A +F E+ E G+ + ++SVY+ LI G
Sbjct: 676 MKTAYTLFSELPELGL-------------------------------MPNVSVYNSLISG 704
Query: 245 LLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL 281
L + A ++++M+ G + TY ++ G L
Sbjct: 705 FRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLL 741
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 106/236 (44%), Gaps = 16/236 (6%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
TF + + + +E+ H M S +L ++D C ++ A + +L
Sbjct: 627 TFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL 686
Query: 91 KEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
E + P+ Y LI GF + G + A ++ M ++G D+ M++ L K
Sbjct: 687 PELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNI 746
Query: 150 GEALKLFETMRLKRMDELGLST----YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL 205
A L+ + +LG+ + +++ + KG +A K+ EEM+++ + + L
Sbjct: 747 NLASDLYSELL-----DLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVL 801
Query: 206 TLGSVVYGLLAKHRVREAYQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQV 257
+V+ G + + EA+++ D + V D +V++ L+ G ++ + A+++
Sbjct: 802 LYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG--RVEKPPAASKI 855
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 122/281 (43%), Gaps = 32/281 (11%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGV-CYKHLIRGFCDKGDLIEA 117
G + ET V+ A +EEA V+ ++ + P V L+ G+C +L +A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLV-- 175
++N M +EG PD M+E K + +A++ + M+ R+ + + ++
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Query: 176 -IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA----YQIVDRI 230
+K + + FE G + + L L K +A +++++
Sbjct: 425 CLKAESPEAALEIFNDSFESWIAHGFMCNKIFL------LFCKQGKVDAATSFLKMMEQK 478
Query: 231 GV-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGT 289
G+ ++ Y+ ++ +++ A +F EM+++G EP TY +L+ G + +
Sbjct: 479 GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNA 538
Query: 290 DPLVN-------------FDTIFVGGLVKVG---KAREYIK 314
++N ++TI + GL KVG KA+E ++
Sbjct: 539 WDVINQMNASNFEANEVIYNTI-INGLCKVGQTSKAKEMLQ 578
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 131/303 (43%), Gaps = 42/303 (13%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRT-FVIALRTLGGARELKKCVEVFHLMNSNG 59
++D K+ N+ E+ +++++ D + + +R L + + M G
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG 330
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEAS 118
++ T N ++ A+C +EA + ++ V PD + YK +I+G C GD+ A+
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Query: 119 K---------------IWN--------------------LMADEGFEPDVEAVEKMMETL 143
+ +WN LM G +P+V ++
Sbjct: 391 EFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 144 FKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
K + +A + MR ++ +TY L++ C G + A ++++EM RG Q D
Sbjct: 451 VKGGRLIDAWWVKNEMRSTKIHP-DTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Query: 204 NLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHG----LIKGLLKLRRAGEATQVFR 259
+T +V GL K R+++A ++ RI I++ H L K +L+R GEA V++
Sbjct: 510 IITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYK 569
Query: 260 EMI 262
+ +
Sbjct: 570 KWL 572
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 129/335 (38%), Gaps = 81/335 (24%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC--------GYKLVEE 82
++ ++ L + K + +F+ MN G N T N +V A+C KL+EE
Sbjct: 193 SYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEE 252
Query: 83 A-------------------------KYVVLKLKEW-------VKPDGVCYKHLIRGFCD 110
VV L+ W V D V Y +IRG C
Sbjct: 253 ILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCS 312
Query: 111 KGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS 170
G+++ A M G PDV ++ L K + EA L TM+ + +S
Sbjct: 313 SGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQIS 372
Query: 171 TYRLVIKWMCNKGMM-----------------------------------SQAQKVFEEM 195
Y+++I+ +C G + S A V M
Sbjct: 373 -YKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLM 431
Query: 196 RERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRRA 251
G++ + T ++++G + R+ +A+ + + + D + Y+ L+ L
Sbjct: 432 LSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHL 491
Query: 252 GEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR 286
A Q++ EM++RGC+P + TY L++G L +GR
Sbjct: 492 RLAFQLYDEMLRRGCQPDIITYTELVRG-LCWKGR 525
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 91/229 (39%), Gaps = 44/229 (19%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
V P + + HL+ G C G + +A + M + G P+ + +++ L VN +AL
Sbjct: 152 VIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKAL 211
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMS--------------------------- 186
LF TM K T +++ +C KG++
Sbjct: 212 YLFNTMN-KYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTI 270
Query: 187 ------------QAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY----QIVDRI 230
QA +V++EM ++ + D++ ++ GL + + AY +V R
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG 330
Query: 231 GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
D+ Y+ LI L K + EA + M G P +Y +++QG
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQG 379
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 42/254 (16%)
Query: 68 NKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD 126
N +++ +C + EA + + K V+PD V Y L +GF G + A ++ M D
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320
Query: 127 EGFEPDVEA------------------------------------VEKMMETLFKVNQGG 150
+G PDV M+ L K +
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 151 EALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSV 210
EAL LF M+ + L Y +VI +C G A +++EM ++ I ++ T G++
Sbjct: 381 EALSLFNQMKADGLSP-DLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 211 VYGLLAKHRVREAYQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGC 266
+ GL K + EA ++D + +DI +Y+ +I G K EA ++F+ +I+ G
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 267 EPTMHTYIMLLQGH 280
P++ T+ L+ G+
Sbjct: 500 TPSVATFNSLIYGY 513
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 155/384 (40%), Gaps = 27/384 (7%)
Query: 9 RNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLN 68
R D W++ +I + + T+ + L ++L+ V G ++ + N
Sbjct: 170 RETDKMWDVYKEIKDK---NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFN 226
Query: 69 KVVDAMCGYKLVEEAK-YVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADE 127
++ C V+ AK + LK + P + LI G C G + EA ++ + M
Sbjct: 227 SIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKH 286
Query: 128 GFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQ 187
G EPD + + + A ++ M K + + TY +++ C G +
Sbjct: 287 GVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSP-DVITYTILLCGQCQLGNIDM 345
Query: 188 AQKVFEEMRERGIQIDNLTLGSV-VYGLLAKHRVREAYQIVDRIGV----MDISVYHGLI 242
+ ++M RG +++++ SV + GL R+ EA + +++ D+ Y +I
Sbjct: 346 GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 405
Query: 243 KGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG-----RKGTDPLVN--- 294
GL KL + A ++ EM + P T+ LL G L ++G R D L++
Sbjct: 406 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG-LCQKGMLLEARSLLDSLISSGE 464
Query: 295 -----FDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEE 349
I + G K G E ++ + V+ G+ +N ++ + + + E
Sbjct: 465 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI---AE 521
Query: 350 MGKKLREVGLVDLADILERYGQKM 373
K L + L LA + Y M
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLM 545
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 8/272 (2%)
Query: 15 WELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYN-LETLNKVVD 72
WE++ D+ + + D T+ I L + + + M S G+ N + + ++
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 371
Query: 73 AMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEP 131
+C ++EA + ++K + + PD V Y +I G C G A +++ M D+ P
Sbjct: 372 GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431
Query: 132 DVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKV 191
+ ++ L + EA L +++ + + L + Y +VI G + +A ++
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSL-ISSGETLDIVLYNIVIDGYAKSGCIEEALEL 490
Query: 192 FEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDIS----VYHGLIKGLLK 247
F+ + E GI T S++YG + EA +I+D I + ++ Y L+
Sbjct: 491 FKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 550
Query: 248 LRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
++ REM G PT TY ++ +G
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/304 (19%), Positives = 128/304 (42%), Gaps = 25/304 (8%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKH 103
+++ +E+F ++ G ++ T N ++ C + + EA+ ++ +K + + P V Y
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETL---FKVNQGGEALK--LFET 158
L+ + + G+ ++ M EG P + + L +K L+ +FE
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 159 MR--LKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVY 212
+ L+ M+ G+ TY +I+++C +S A E M+ R + + T ++
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 213 GLLAKHRVREAYQIVDRIGVMDISV----YHGLIKGLLKLRRAGEATQVFREMIKRGCEP 268
L +R+A + + ++S+ Y LIK A ++F +++ RG
Sbjct: 664 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 723
Query: 269 TMHTYIMLLQGHLGRRGRKGTDP--------LVNFDTIFVGGLVKVGKAREYIKYVERVM 320
++ Y ++ L RR P L++ + FV + R + VE++
Sbjct: 724 SIRDYSAVIN-RLCRRHLMNCFPGQSNGVCCLISNERSFVYCPILSANCRRHTLSVEKLS 782
Query: 321 NRGL 324
+ L
Sbjct: 783 HEVL 786
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 42/254 (16%)
Query: 68 NKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD 126
N +++ +C + EA + + K V+PD V Y L +GF G + A ++ M D
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320
Query: 127 EGFEPDVEA------------------------------------VEKMMETLFKVNQGG 150
+G PDV M+ L K +
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 151 EALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSV 210
EAL LF M+ + L Y +VI +C G A +++EM ++ I ++ T G++
Sbjct: 381 EALSLFNQMKADGLSP-DLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 211 VYGLLAKHRVREAYQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGC 266
+ GL K + EA ++D + +DI +Y+ +I G K EA ++F+ +I+ G
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 267 EPTMHTYIMLLQGH 280
P++ T+ L+ G+
Sbjct: 500 TPSVATFNSLIYGY 513
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 155/384 (40%), Gaps = 27/384 (7%)
Query: 9 RNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLN 68
R D W++ +I + + T+ + L ++L+ V G ++ + N
Sbjct: 170 RETDKMWDVYKEIKDK---NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFN 226
Query: 69 KVVDAMCGYKLVEEAK-YVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADE 127
++ C V+ AK + LK + P + LI G C G + EA ++ + M
Sbjct: 227 SIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKH 286
Query: 128 GFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQ 187
G EPD + + + A ++ M K + + TY +++ C G +
Sbjct: 287 GVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSP-DVITYTILLCGQCQLGNIDM 345
Query: 188 AQKVFEEMRERGIQIDNLTLGSV-VYGLLAKHRVREAYQIVDRIGV----MDISVYHGLI 242
+ ++M RG +++++ SV + GL R+ EA + +++ D+ Y +I
Sbjct: 346 GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 405
Query: 243 KGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG-----RKGTDPLVN--- 294
GL KL + A ++ EM + P T+ LL G L ++G R D L++
Sbjct: 406 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG-LCQKGMLLEARSLLDSLISSGE 464
Query: 295 -----FDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEE 349
I + G K G E ++ + V+ G+ +N ++ + + + E
Sbjct: 465 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI---AE 521
Query: 350 MGKKLREVGLVDLADILERYGQKM 373
K L + L LA + Y M
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLM 545
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 8/272 (2%)
Query: 15 WELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYN-LETLNKVVD 72
WE++ D+ + + D T+ I L + + + M S G+ N + + ++
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 371
Query: 73 AMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEP 131
+C ++EA + ++K + + PD V Y +I G C G A +++ M D+ P
Sbjct: 372 GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431
Query: 132 DVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKV 191
+ ++ L + EA L +++ + + L + Y +VI G + +A ++
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSL-ISSGETLDIVLYNIVIDGYAKSGCIEEALEL 490
Query: 192 FEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDIS----VYHGLIKGLLK 247
F+ + E GI T S++YG + EA +I+D I + ++ Y L+
Sbjct: 491 FKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 550
Query: 248 LRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
++ REM G PT TY ++ +G
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 126/299 (42%), Gaps = 25/299 (8%)
Query: 45 LKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKH 103
+++ +E+F ++ G ++ T N ++ C + + EA+ ++ +K + + P V Y
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETL---FKVNQGGEALK--LFET 158
L+ + + G+ ++ M EG P + + L +K L+ +FE
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 159 MR--LKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVY 212
+ L+ M+ G+ TY +I+++C +S A E M+ R + + T ++
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 213 GLLAKHRVREAYQIVDRIGVMDISV----YHGLIKGLLKLRRAGEATQVFREMIKRGCEP 268
L +R+A + + ++S+ Y LIK A ++F +++ RG
Sbjct: 664 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 723
Query: 269 TMHTYIMLLQGHLGRRGRKGTDP--------LVNFDTIFVGGLVKVGKAREYIKYVERV 319
++ Y ++ L RR P L++ + FV + R + VE++
Sbjct: 724 SIRDYSAVIN-RLCRRHLMNCFPGQSNGVCCLISNERSFVYCPILSANCRRHTLSVEKL 781
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 42/230 (18%)
Query: 124 MADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKG 183
M EG PD+E + M++ +V+ A++LFE + + ++ +++ +C +
Sbjct: 177 MVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGV-KCSTESFNALLRCLCERS 235
Query: 184 MMSQAQKVF----------------------------------EEMRERGIQIDNLTLGS 209
+S A+ VF +EM E G D L+
Sbjct: 236 HVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSH 295
Query: 210 VVYGLLAKHRVREAYQIVDRI----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
++ GL R+ ++ +I D I V D +VY+ +I + R E+ + +R M+
Sbjct: 296 LIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEE 355
Query: 266 CEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGG-LVKVGKAREYIK 314
CEP + TY L+ G + +GRK +D L F+ + G L G ++K
Sbjct: 356 CEPNLETYSKLVSGLI--KGRKVSDALEIFEEMLSRGVLPTTGLVTSFLK 403
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 134/320 (41%), Gaps = 19/320 (5%)
Query: 32 FVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK 91
IA+ + +++ +E+F S G + E+ N ++ +C V AK V K
Sbjct: 189 LTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK 248
Query: 92 EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGE 151
+ D Y +I G+ G++ E K+ M + GF PD + ++E L + + +
Sbjct: 249 GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRIND 308
Query: 152 ALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVV 211
++++F+ ++ K + + Y +I + ++ + + M + + + T +V
Sbjct: 309 SVEIFDNIKHKG-NVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLV 367
Query: 212 YGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLK-LRRAGE---ATQVFREMIKRGCE 267
GL+ +V +A +I + + + GL+ LK L G A ++++ K GC
Sbjct: 368 SGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCR 427
Query: 268 PTMHTYIMLLQGHLGRRGR-------------KGTDPLVNFDTIFVGGLVKVGKAREYIK 314
+ Y +LL+ L R G+ G V V GL +G +
Sbjct: 428 ISESAYKLLLK-RLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVL 486
Query: 315 YVERVMNRGLEVPRFDYNKF 334
+E M +G RF Y++
Sbjct: 487 VMEEAMRKGFCPNRFVYSRL 506
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 9/194 (4%)
Query: 95 KPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALK 154
P+ Y L+ +C +G + EA K+W M G D+ A M+ L + +A +
Sbjct: 278 SPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKE 337
Query: 155 LFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGL 214
LF M LK + E TY ++ C G + V+ EM+ +G + D LT+ ++V GL
Sbjct: 338 LFRDMGLKGI-ECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGL 396
Query: 215 LAK---HRVREAYQIV-----DRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGC 266
RV EA IV + + + Y L+K L + + A + EM+ +G
Sbjct: 397 CDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGF 456
Query: 267 EPTMHTYIMLLQGH 280
+P+ TY + G+
Sbjct: 457 KPSQETYRAFIDGY 470
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 146/367 (39%), Gaps = 83/367 (22%)
Query: 32 FVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVD-------AMCGYKL----- 79
F + +++ ++E+ V V + S G + T N ++ A GYK+
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF 224
Query: 80 ------VEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADE-GFEPD 132
V+EAK ++ K +KP+ + ++ F +G+ +IW M +E G P+
Sbjct: 225 GLDDVSVDEAKKMIGK----IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPN 280
Query: 133 VEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVF 192
V +Y ++++ C +G+MS+A+KV+
Sbjct: 281 V------------------------------------YSYNVLMEAYCARGLMSEAEKVW 304
Query: 193 EEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDIS----VYHGLIKGLLKL 248
EEM+ RG+ D + +++ GL + V +A ++ +G+ I Y L+ G K
Sbjct: 305 EEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKA 364
Query: 249 RRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL----GRRGRKGTD------------PL 292
V+REM ++G E T L++G G+R + D P
Sbjct: 365 GDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPS 424
Query: 293 VNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYF----SNEEGVLMFE 348
N + V L + GK + ++ +G + + Y F+ + E L+
Sbjct: 425 RNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAI 484
Query: 349 EMGKKLR 355
EM + L+
Sbjct: 485 EMAESLK 491
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 150/351 (42%), Gaps = 54/351 (15%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEA-KYVVLK 89
++ I + L A ++ VE+++ M +G + + +V +C + V+ A + V +
Sbjct: 151 SYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEE 210
Query: 90 LKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVN- 147
+K VK V Y LI GFC G + +A + + M+ G EPD+ ++ + N
Sbjct: 211 IKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNM 270
Query: 148 ------------QGGEALKLFETMRL------------------KRMDELGLS---TYRL 174
+ G L + +L K M+ G +Y
Sbjct: 271 LKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYST 330
Query: 175 VIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMD 234
+I+ C +A ++FEEMR++G+ ++ +T S++ L + A +++D++ +
Sbjct: 331 LIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG 390
Query: 235 IS----VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR---- 286
+S Y ++ L K +A VF +MI+ P +Y L+ G L R GR
Sbjct: 391 LSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISG-LCRSGRVTEA 449
Query: 287 -------KGTDPLVNFDT--IFVGGLVKVGKAREYIKYVERVMNRGLEVPR 328
KG + + T +GGL++ K K +++M++G + R
Sbjct: 450 IKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDR 500
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
Y +ET + + Y+L EE + ++ + + V Y LI+ F +G+ A
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMR------QKGMVMNVVTYTSLIKAFLREGNSSVAK 380
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKW 178
K+ + M + G PD +++ L K +A +F M + +S Y +I
Sbjct: 381 KLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAIS-YNSLISG 439
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY----QIVDRIGVMD 234
+C G +++A K+FE+M+ + D LT ++ GL+ ++ AY Q++D+ +D
Sbjct: 440 LCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Query: 235 ISVYHGLIKG 244
V LIK
Sbjct: 500 RDVSDTLIKA 509
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 119/319 (37%), Gaps = 65/319 (20%)
Query: 95 KPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALK 154
+PD V Y LI G G + +A +IWN M G PD +A ++ L + A +
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205
Query: 155 L----FETMRLK---------------------------RMDELG----LSTYRLVIKWM 179
+ ++ R+K M ++G L TY +++ +
Sbjct: 206 MVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKH-RVREAYQIVDRI-------G 231
+ M+ +A+ V EM GIQ+D + LL +H RV + + + G
Sbjct: 266 YDNNMLKRAEGVMAEMVRSGIQLDAYSYNQ----LLKRHCRVSHPDKCYNFMVKEMEPRG 321
Query: 232 VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRK---- 287
D+ Y LI+ + +A ++F EM ++G + TY L++ L R G
Sbjct: 322 FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFL-REGNSSVAK 380
Query: 288 ---------GTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYF 338
G P F T + L K G + ++ + YN +
Sbjct: 381 KLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGL 440
Query: 339 SNE----EGVLMFEEMGKK 353
E + +FE+M K
Sbjct: 441 CRSGRVTEAIKLFEDMKGK 459
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 2/169 (1%)
Query: 63 NLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIW 121
++ T + +++A + V EA+ + ++ W + P + Y +I GFC + + +A ++
Sbjct: 79 DIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML 138
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCN 181
+ MA +G PDV ++ K + +++F M +R TY +I C
Sbjct: 139 DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH-RRGIVANTVTYTTLIHGFCQ 197
Query: 182 KGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI 230
G + AQ + EM G+ D +T ++ GL +K +R+A+ I++ +
Sbjct: 198 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 97/220 (44%), Gaps = 6/220 (2%)
Query: 70 VVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEG 128
+VD +C A+ + ++ E + P+ + Y +I FC G +A ++ M ++
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQA 188
PD+ ++ K + EA ++++ M + + TY +I C + + A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTI-TYNSMIDGFCKQDRVDDA 134
Query: 189 QKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI---VDRIGVMDISV-YHGLIKG 244
+++ + M +G D +T +++ G RV +I + R G++ +V Y LI G
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 245 LLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRR 284
++ A + EMI G P T+ +L G ++
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 234
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 18/181 (9%)
Query: 175 VIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI----VDRI 230
++ +C G AQ +F EM E+GI + LT ++ R +A Q+ +++
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 231 GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH---------- 280
DI + LI +K R+ EA ++++EM++ PT TY ++ G
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 281 --LGRRGRKGTDP-LVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHY 337
L KG P +V F T+ + G K + ++ + RG+ Y +H
Sbjct: 136 RMLDSMASKGCSPDVVTFSTL-INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 338 F 338
F
Sbjct: 195 F 195
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 16 ELLSDIARRRFATDRT-FVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAM 74
E+LS I + TD + LG +++ ++F M +G ++ T N ++ +
Sbjct: 428 EMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASF 487
Query: 75 CGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDV 133
V+EA + +L + KPD + Y LI GD+ EA + M ++G PDV
Sbjct: 488 GRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDV 547
Query: 134 EAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFE 193
+ME K + A LFE M +K + + TY +++ + G ++A ++
Sbjct: 548 VTYSTLMECFGKTERVEMAYSLFEEMLVKGC-QPNIVTYNILLDCLEKNGRTAEAVDLYS 606
Query: 194 EMRERGIQIDNLT------LGSVVYGLLAKHRVREAYQIV 227
+M+++G+ D++T L SV +G K R+R I
Sbjct: 607 KMKQQGLTPDSITYTVLERLQSVSHG---KSRIRRKNPIT 643
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 14/239 (5%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGD 113
M Y Y + TL+K+ G+ V EA + + + VK + Y ++ C G
Sbjct: 370 MTQGIYSYLVRTLSKL-----GH--VSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGK 422
Query: 114 LIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYR 173
IEA ++ + + ++G D + L K+ Q LFE M+ K + TY
Sbjct: 423 TIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK-KDGPSPDIFTYN 481
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY----QIVDR 229
++I G + +A +FEE+ + D ++ S++ L V EA+ ++ ++
Sbjct: 482 ILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
Query: 230 IGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKG 288
D+ Y L++ K R A +F EM+ +GC+P + TY +LL L + GR
Sbjct: 542 GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDC-LEKNGRTA 599
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 103/228 (45%), Gaps = 44/228 (19%)
Query: 54 LMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKG 112
++ SN +G N+ T+N ++ + E+ + + +K+W +K + YK L++ +
Sbjct: 162 MVKSNVHG-NISTVNILIGF---FGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSR 217
Query: 113 DLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLK--RMDELGLS 170
D +A ++ + G + D+ A +++ L K +A ++FE M+ + R DE
Sbjct: 218 DYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK---DEKACQVFEDMKKRHCRRDEY--- 271
Query: 171 TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI 230
TY ++I+ M G +A +F EM G+
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEMITEGL------------------------------ 301
Query: 231 GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQ 278
+++ Y+ L++ L K + +A QVF M++ GC P +TY +LL
Sbjct: 302 -TLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLN 348
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 99/251 (39%), Gaps = 41/251 (16%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
+++ L +L GA + + +E+ ++ G + N V A+ K + + K+
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 91 K-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
K + PD Y LI F G++ EA I+ + +PD+ + ++ L K
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528
Query: 150 GEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL 205
EA +R K M E GL+ TY +++ + A +FEEM +G Q
Sbjct: 529 DEA-----HVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQ---- 579
Query: 206 TLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
+I Y+ L+ L K R EA ++ +M ++G
Sbjct: 580 ---------------------------PNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQG 612
Query: 266 CEPTMHTYIML 276
P TY +L
Sbjct: 613 LTPDSITYTVL 623
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 27 ATDRTFVIALRTLGGARELKKCVEVFHLMNSNG---YGYNLETLNKVVDAMCGYKLVEEA 83
T T+ ++ G A + ++ E+ LM G G N+ T N +V A C K VEEA
Sbjct: 148 PTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEA 207
Query: 84 KYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMET 142
VV K++E V+PD V Y + + KG+ + A + E VEKM+
Sbjct: 208 WEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA--------------ESEVVEKMV-- 251
Query: 143 LFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQI 202
+K + T +V+ C +G + + M+E ++
Sbjct: 252 ------------------MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA 293
Query: 203 DNLTLGSVVYG---LLAKHRVREAYQIVDRIGV-MDISVYHGLIKGLLKLRRAGEATQVF 258
+ + S++ G ++ + + E ++ V D+ Y ++ +A QVF
Sbjct: 294 NLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVF 353
Query: 259 REMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLV 293
+EM+K G +P H Y +L +G++ + K + L+
Sbjct: 354 KEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL 388
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 3/187 (1%)
Query: 96 PDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKL 155
P+ + Y L+ + G A I+ M G EP + +++T + ++ EA ++
Sbjct: 172 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 231
Query: 156 FETMRLKRMDELGLST--YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
FET+ ++ L Y ++I G +A+KVF M +G+ +T S++
Sbjct: 232 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF 291
Query: 214 LLAKHRVREAYQIVDRIGVM-DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHT 272
+ V + Y + R + D+ Y LIK + RR EA VF EM+ G PT
Sbjct: 292 ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKA 351
Query: 273 YIMLLQG 279
Y +LL
Sbjct: 352 YNILLDA 358
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 105/241 (43%), Gaps = 7/241 (2%)
Query: 42 ARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCY 101
A +K +VF M G + T N ++ YK V + Y ++ + ++PD V Y
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKI-YDQMQRSD-IQPDVVSY 317
Query: 102 KHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRL 161
LI+ + EA ++ M D G P +A +++ +A +F++MR
Sbjct: 318 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 377
Query: 162 KRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVR 221
R+ L +Y ++ N M A+K F+ ++ G + + +T G+++ G + V
Sbjct: 378 DRIFP-DLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVE 436
Query: 222 EAYQIVDRIGVMDISVYHGLIKGLL----KLRRAGEATQVFREMIKRGCEPTMHTYIMLL 277
+ ++ +++ + I ++ ++ + + G A ++EM G P +LL
Sbjct: 437 KMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 496
Query: 278 Q 278
Sbjct: 497 S 497
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
++ + ++ G AR ++ + VF M G + N ++DA +VE+AK V +
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Query: 91 K-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
+ + + PD Y ++ + + D+ A K + + +GFEP++ +++ K N
Sbjct: 376 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 435
Query: 150 GEALKLFETMRL 161
+ ++++E MRL
Sbjct: 436 EKMMEVYEKMRL 447
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 121/272 (44%), Gaps = 11/272 (4%)
Query: 15 WELLSDIARRRFATD-RTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNL--ETLNKVV 71
W L+ ++ + F T RTF + + + G A K+ V F M S + Y + N ++
Sbjct: 169 WRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQF--MKSKTFNYRPFKHSYNAIL 226
Query: 72 DAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFE 130
+++ G K + ++V + L++ PD + Y L+ G + ++++ MA +GF
Sbjct: 227 NSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFS 286
Query: 131 PDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQK 190
PD ++ L K N+ AL M+ +D L Y +I + G + +
Sbjct: 287 PDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLH-YTTLIDGLSRAGNLEACKY 345
Query: 191 VFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYHGLIKGLL 246
+EM + G + D + ++ G + + +A ++ + V ++ Y+ +I+GL
Sbjct: 346 FLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLC 405
Query: 247 KLRRAGEATQVFREMIKRGCEPTMHTYIMLLQ 278
EA + +EM RGC P Y L+
Sbjct: 406 MAGEFREACWLLKEMESRGCNPNFVVYSTLVS 437
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 3/191 (1%)
Query: 11 IDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNK 69
+D F L ++AR F+ D T+ I L LG + + + M G ++
Sbjct: 270 MDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTT 329
Query: 70 VVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEG 128
++D + +E KY + ++ K +PD VCY +I G+ G+L +A +++ M +G
Sbjct: 330 LIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKG 389
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQA 188
P+V M+ L + EA L + M + + Y ++ ++ G +S+A
Sbjct: 390 QLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNP-NFVVYSTLVSYLRKAGKLSEA 448
Query: 189 QKVFEEMRERG 199
+KV EM ++G
Sbjct: 449 RKVIREMVKKG 459
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 152 ALKLFETMRLKRMDELGLS------TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL 205
AL LF+ M+ +R G S TY +I +C G A V++E++ G + DN
Sbjct: 267 ALSLFKEMK-ERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNS 325
Query: 206 TLGSVVYGLLAKHRVREAYQIVDRIG----VMDISVYHGLIKGLLKLRRAGEATQVFREM 261
T ++ G +R+ +A +I + V D VY+ L+ G LK R+ EA Q+F +M
Sbjct: 326 TYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKM 385
Query: 262 IKRGCEPTMHTYIMLLQGHLGRRGR-----------KGTDPLVNFDTIFVGG--LVKVGK 308
++ G + TY +L+ G L R GR K V+ T + G L + GK
Sbjct: 386 VQEGVRASCWTYNILIDG-LFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGK 444
Query: 309 AREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKKLREVGLV 360
+K VE + RG V + L F + E++ K +RE LV
Sbjct: 445 LEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLV 496
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 33/220 (15%)
Query: 130 EPDVEAVEKMMETLFKV--NQGGEAL--KLFETMRLKRMDELGLSTYRLVIKWMCNKGMM 185
+PD V+ MM T + ++G +L KLFE + +L TY ++ KG
Sbjct: 588 KPDSFDVD-MMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYF 646
Query: 186 SQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI----GVMDISVYHGL 241
A+ V ++M E D T ++ GL R A ++DR+ G +DI +Y+ L
Sbjct: 647 QTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTL 706
Query: 242 IKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVG 301
I L K R EATQ+F M G P + +Y +++ VN
Sbjct: 707 INALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIE--------------VN------- 745
Query: 302 GLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNE 341
K GK +E KY++ +++ G +P + L Y E
Sbjct: 746 --SKAGKLKEAYKYLKAMLDAGC-LPNHVTDTILDYLGKE 782
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 108/239 (45%), Gaps = 9/239 (3%)
Query: 15 WELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMN------SNGYGYNLETLN 68
+E L + R +F T ++ I + G +L + +F M + +G ++ T N
Sbjct: 235 FEKLKGMKRFKFDT-WSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYN 293
Query: 69 KVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADE 127
++ +C + ++A V +LK +PD Y+ LI+G C + +A +I+ M
Sbjct: 294 SLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYN 353
Query: 128 GFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQ 187
GF PD +++ K + EA +LFE M ++ TY ++I + G
Sbjct: 354 GFVPDTIVYNCLLDGTLKARKVTEACQLFEKM-VQEGVRASCWTYNILIDGLFRNGRAEA 412
Query: 188 AQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLL 246
+F +++++G +D +T V L + ++ A ++V+ + SV I LL
Sbjct: 413 GFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLL 471
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 3/187 (1%)
Query: 96 PDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKL 155
P+ + Y L+ + G A I+ M G EP + +++T + ++ EA ++
Sbjct: 179 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 238
Query: 156 FETMRLKRMDELGLST--YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
FET+ ++ L Y ++I G +A+KVF M +G+ +T S++
Sbjct: 239 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF 298
Query: 214 LLAKHRVREAYQIVDRIGVM-DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHT 272
+ V + Y + R + D+ Y LIK + RR EA VF EM+ G PT
Sbjct: 299 ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKA 358
Query: 273 YIMLLQG 279
Y +LL
Sbjct: 359 YNILLDA 365
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 103/241 (42%), Gaps = 7/241 (2%)
Query: 42 ARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCY 101
A +K +VF M G + T N ++ YK E +K + ++PD V Y
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK--EVSKIYDQMQRSDIQPDVVSY 324
Query: 102 KHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRL 161
LI+ + EA ++ M D G P +A +++ +A +F++MR
Sbjct: 325 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 384
Query: 162 KRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVR 221
R+ L +Y ++ N M A+K F+ ++ G + + +T G+++ G + V
Sbjct: 385 DRIFP-DLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVE 443
Query: 222 EAYQIVDRIGVMDISVYHGLIKGLL----KLRRAGEATQVFREMIKRGCEPTMHTYIMLL 277
+ ++ +++ + I ++ ++ + + G A ++EM G P +LL
Sbjct: 444 KMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 503
Query: 278 Q 278
Sbjct: 504 S 504
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
++ + ++ G AR ++ + VF M G + N ++DA +VE+AK V +
Sbjct: 323 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
Query: 91 K-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
+ + + PD Y ++ + + D+ A K + + +GFEP++ +++ K N
Sbjct: 383 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 442
Query: 150 GEALKLFETMRL 161
+ ++++E MRL
Sbjct: 443 EKMMEVYEKMRL 454
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 80 VEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLM-ADEGFEPDVEAVEK 138
+E A+ V ++ E D V + +I G+ G + K++ M A F+P+ V
Sbjct: 183 IESARKVFDEMSE---RDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVIS 239
Query: 139 MMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRER 198
+ + + + L++ + M ++ ++ LS VI + G + A+ +F+EM E+
Sbjct: 240 VFQACGQSSDLIFGLEVHKKM-IENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK 298
Query: 199 GIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVF 258
D++T G+++ G +A V+EA + + + +S ++ +I GL++ E F
Sbjct: 299 ----DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSF 354
Query: 259 REMIKRGCEPTMHTYIMLLQGHLGRRGRKG 288
REMI+ G P T LL KG
Sbjct: 355 REMIRCGSRPNTVTLSSLLPSLTYSSNLKG 384
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 134/291 (46%), Gaps = 19/291 (6%)
Query: 2 LDVVGKSRNIDLFWELLSDIAR--RRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNG 59
L ++ + R D W L++++ + + ++ I L + ++ +E F M
Sbjct: 110 LHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEI 169
Query: 60 Y--GYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEA 117
+ + ++ N ++ A C + ++EA+ + KL PD L+ GF + GD+
Sbjct: 170 FRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTAT 229
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS-TYRLVI 176
++ M GF+P+ ++ K GEAL+LFE MD L T +++
Sbjct: 230 ELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFED-----MDRLDFDITVQILT 284
Query: 177 KWMCNKGMMS---QAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI--- 230
+ G+ +A+++F+E+ +RG+ D +++ L+ V A +++ +
Sbjct: 285 TLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEK 344
Query: 231 GVMDISV-YHGLIKGLLKLRRAG--EATQVFREMIKRGCEPTMHTYIMLLQ 278
G+ SV +H + G++K + G + +++M +R P T +ML++
Sbjct: 345 GIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMK 395
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 11/224 (4%)
Query: 63 NLETLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIW 121
NL T +V A+C V+E + +V +L+ E + D V Y + I G+ G L++A
Sbjct: 206 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD 265
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCN 181
M ++G DV + +++ L K EAL L M +K E L TY +I+ +C
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKM-IKEGVEPNLITYTAIIRGLCK 324
Query: 182 KGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIV---DRIGVM-DISV 237
G + +A +F + GI++D +++ G+ K + A+ ++ ++ G+ I
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 238 YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL 281
Y+ +I GL R EA +V +G + TY LL ++
Sbjct: 385 YNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYI 423
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 43/222 (19%)
Query: 97 DGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLF 156
D V Y LI G +G++ EA + M EG EP++ ++ L K+ + EA LF
Sbjct: 276 DVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLF 335
Query: 157 ETMRLKRMDELGLST----YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVY 212
R+ +G+ Y +I +C KG +++A + +M +RGIQ LT +V+
Sbjct: 336 -----NRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVIN 390
Query: 213 GLLAKHRVREAYQI--------------------VDRIGV--------------MDISVY 238
GL RV EA ++ V I MD+ +
Sbjct: 391 GLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMC 450
Query: 239 HGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
+ L+K L + GEA ++R M + P TY +++G+
Sbjct: 451 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGY 492
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 29/242 (11%)
Query: 96 PDGVCYKHLIRGFCDKGDLIEASKIWNLMADEG--FEPDVEAVEKMMETLFKVNQGGEAL 153
P + + LI F +KG++ A ++ +M ++ + D ++ K+ + AL
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 191
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
FE+ + L TY ++ +C G + + + + + + G + D + + ++G
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHG 251
Query: 214 LLAKHRVREAY----QIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPT 269
+ +A ++V++ D+ Y LI GL K EA + +MIK G EP
Sbjct: 252 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPN 311
Query: 270 MHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRF 329
+ TY T + GL K+GK E R+++ G+EV F
Sbjct: 312 LITY-----------------------TAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEF 348
Query: 330 DY 331
Y
Sbjct: 349 LY 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 122/288 (42%), Gaps = 21/288 (7%)
Query: 90 LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
L+ + D V L++ F G EA ++ M + PD M++ K Q
Sbjct: 439 LEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQI 498
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
EAL++F +R + Y +I +C KGM+ A +V E+ E+G+ +D T +
Sbjct: 499 EEALEMFNELRKSSVS--AAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRT 556
Query: 210 VVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIK-GLLKLRRAGE---ATQVFREMIKRG 265
+++ + A + +V + ++ V G++ +L L + G A +V+ M ++G
Sbjct: 557 LLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKG 616
Query: 266 CEPTMHTYIM-------------LLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREY 312
T + I+ LL + G D ++++ TI + GL K G +
Sbjct: 617 LTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMD-VIDY-TIIINGLCKEGFLVKA 674
Query: 313 IKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKKLREVGLV 360
+ +RG+ + YN ++ + ++ + L +GLV
Sbjct: 675 LNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLV 722
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 106/249 (42%), Gaps = 23/249 (9%)
Query: 44 ELKKCVEVFHLMNSNGYGYNLET--LNKVVD---AMCGYKLVEEAKYVVLKLKEWVKPDG 98
+ +EV+ +M G + L +VD ++ Y LV A L D
Sbjct: 601 SFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLS-----SMDV 655
Query: 99 VCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFET 158
+ Y +I G C +G L++A + + G + ++ L + EAL+LF++
Sbjct: 656 IDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDS 715
Query: 159 MRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGL 214
+ + +GL TY ++I +C +G+ A+K+ + M +G+ + + S+V G
Sbjct: 716 L-----ENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGY 770
Query: 215 LAKHRVREAYQIVDR--IG--VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTM 270
+ +A ++V R +G D +IKG K EA VF E +
Sbjct: 771 CKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADF 830
Query: 271 HTYIMLLQG 279
++ L++G
Sbjct: 831 FGFLFLIKG 839
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 6/177 (3%)
Query: 108 FCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDEL 167
C +G A +++ +M +G V +++TL + +A L + +
Sbjct: 596 LCKRGSFEAAIEVYMIMRRKGLT--VTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSM 653
Query: 168 GLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIV 227
+ Y ++I +C +G + +A + + RG+ ++ +T S++ GL + + EA ++
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 228 D---RIGVMDISVYHG-LIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
D IG++ V +G LI L K +A ++ M+ +G P + Y ++ G+
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGY 770
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 29 DRTFV-IALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC--GYKLVEEAKY 85
DR F + + T G L + F M S G + T N ++D C G +V E +
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 502
Query: 86 VVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFK 145
++ + + P Y +I + D+ + ++ M +G P+V +++ K
Sbjct: 503 EAMERRGCL-PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Query: 146 VNQGGEALKLFETMRLKRMDELGL----STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQ 201
+ +A++ E M+ +GL + Y +I +G+ QA F M G++
Sbjct: 562 SGRFNDAIECLEEMK-----SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK 616
Query: 202 IDNLTLGSVVYGLLAKHRVREAYQIVDRI---GV-MDISVYHGLIKGLLKLRRAGEATQV 257
L L S++ R EA+ ++ + GV D+ Y L+K L+++ + + V
Sbjct: 617 PSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVV 676
Query: 258 FREMIKRGCEPTMHTYIML 276
+ EMI GC+P ML
Sbjct: 677 YEEMIMSGCKPDRKARSML 695
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 167/404 (41%), Gaps = 32/404 (7%)
Query: 1 MLDVVGKSRNID--LFWELLSDIARRRFATDRTFVIALRTLGGAR--ELKKCVEVFHLMN 56
++ + +S ID + L +I R + D V + +G A+ + K +++ +
Sbjct: 238 VIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDI-IMGFAKSGDPSKALQLLGMAQ 296
Query: 57 SNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLI 115
+ G TL ++ A+ EA+ + +L++ +KP Y L++G+ G L
Sbjct: 297 ATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLK 356
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLV 175
+A + + M G PD +++ + A + + M + RL+
Sbjct: 357 DAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLL 416
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI---GV 232
+ ++G + +V +EM+ G++ D V+ + + A DR+ G+
Sbjct: 417 AGFR-DRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGI 475
Query: 233 -MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH----------- 280
D ++ LI K R A ++F M +RGC P TY +++ +
Sbjct: 476 EPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKR 535
Query: 281 -LGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFS 339
LG+ +G P V T V K G+ + I+ +E + + GL+ YN ++ ++
Sbjct: 536 LLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYA 595
Query: 340 ----NEEGVLMFEEMGKKLREVGLVDLADILERYGQKMATRDRR 379
+E+ V F M + L+ L ++ +G+ DRR
Sbjct: 596 QRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE-----DRR 634
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 87 VLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMA---DEGFEPDVEAVEKMMETL 143
+L K+ + P + Y LI G C + + IE K NL+A +G++ D ++++L
Sbjct: 188 LLSQKQTLTP--LTYNALI-GACARNNDIE--KALNLIAKMRQDGYQSDFVNYSLVIQSL 242
Query: 144 FKVNQGGEA--LKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQ 201
+ N+ L+L++ + ++ EL + +I G S+A ++ + G+
Sbjct: 243 TRSNKIDSVMLLRLYKEIERDKL-ELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLS 301
Query: 202 IDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDIS----VYHGLIKGLLKLRRAGEATQV 257
TL S++ L R EA + + + I Y+ L+KG +K +A +
Sbjct: 302 AKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESM 361
Query: 258 FREMIKRGCEPTMHTYIMLLQGHLG 282
EM KRG P HTY +L+ ++
Sbjct: 362 VSEMEKRGVSPDEHTYSLLIDAYVN 386
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 119/296 (40%), Gaps = 59/296 (19%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARR----RFATDRTFVIALRTLGGARELKKCVEVFHLMN 56
M ++ K + W+ L ++RR T + ++ LG +K+ + F+ M
Sbjct: 133 MACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMK 192
Query: 57 SNGYGYNLETLNKVVDAMCGYKLVEEAKYVV--LKLKEW-VKPDGVCYKHLIRGFCDKG- 112
++ N +++A+C ++A++++ ++L + PD Y LI +C G
Sbjct: 193 EYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGM 252
Query: 113 ----------DLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLK 162
+ EA++++ M GF PDV
Sbjct: 253 QTGCRKAIRRRMWEANRMFREMLFRGFVPDV----------------------------- 283
Query: 163 RMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVRE 222
TY +I C + +A ++FE+M+ +G + +T S + + +
Sbjct: 284 -------VTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEG 336
Query: 223 AYQIVDRI-----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTY 273
A +++ + GV S Y LI L++ RRA EA + EM++ G P +TY
Sbjct: 337 AIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTY 392
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 145/353 (41%), Gaps = 68/353 (19%)
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVK--PDGVCYKHLIRGFCDKGDLIE- 116
+ Y+L + ++ + G K+ +E V+L LK + P + + ++I F +G L
Sbjct: 43 FRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFF-GRGKLPSR 101
Query: 117 ASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELG---LSTYR 173
A +++ M + V+++ ++ L K GE K+ E RL +DE G TY
Sbjct: 102 ALHMFDEMPQYRCQRTVKSLNSLLSALLKC---GELEKMKE--RLSSIDEFGKPDACTYN 156
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI------- 226
++I G A K+F+EM ++ ++ +T G++++GL RV+EA ++
Sbjct: 157 ILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKV 216
Query: 227 ----------------VDRIGVM-----------------DISVYHGLIKGLLKLRRAGE 253
+ +IG + D ++Y LI L+K R+ E
Sbjct: 217 YGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNE 276
Query: 254 ATQVFREMIKRGCEPTMHTYIMLLQGH------------LGRRGRKGTDPLVNFDTIFVG 301
+ + EM ++GC+P TY +L+ G L KG P V + +G
Sbjct: 277 VSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILG 336
Query: 302 GLVKVGKAREYIKYVERVMNRGLEVPRFDY----NKFLHYFSNEEGVLMFEEM 350
++ K E E + RG Y + EE ++ +EM
Sbjct: 337 VFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
KPD V Y LI GFC + D A+++ + M ++G +PDV + ++ F++ + EA
Sbjct: 289 CKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEAT 348
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERG 199
LFE M + LS YR+V +C +A + +EM +G
Sbjct: 349 YLFEDMPRRGCSPDTLS-YRIVFDGLCEGLQFEEAAVILDEMLFKG 393
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 82 EAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMM 140
+AK V L + KE KP+ V Y LI + G L EA +I+ M +G +P+V +V ++
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Query: 141 ETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGI 200
+ + + + + ++ L + Y I N + +A +++ MR++ +
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGIN-LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 526
Query: 201 QIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDIS----VYHGLIKGLLKLRRAGEATQ 256
+ D++T ++ G + EA + + + I VY ++ K + EA
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 586
Query: 257 VFREMIKRGCEPTMHTYIMLLQGH 280
+F +M GCEP + Y +L +
Sbjct: 587 IFNQMKMAGCEPDVIAYTSMLHAY 610
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 142/361 (39%), Gaps = 60/361 (16%)
Query: 17 LLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC 75
L+ D+ R A R T+ + G + ++ +EV M NG G +L T N V+ A
Sbjct: 200 LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSA-- 257
Query: 76 GYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEA 135
YK G Y + F +L++ +K+ PD
Sbjct: 258 -YK------------------SGRQYSKALSYF----ELMKGAKV---------RPDTTT 285
Query: 136 VEKMMETLFKVNQGGEALKLFETMRLKRMD-ELGLSTYRLVIKWMCNKGMMSQAQKVFEE 194
++ L K+ Q +AL LF +MR KR + + T+ ++ KG + + VFE
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 345
Query: 195 MRERGIQIDNLTLGSVVYGLLAKHRVR-EAYQIVDRIG----VMDISVYHGLIKGLLKLR 249
M G++ N+ + + G A H + A ++ I + D+ Y L+ + R
Sbjct: 346 MVAEGLK-PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 404
Query: 250 RAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG-------------RKGTDPLVNFD 296
+ G+A +VF M K +P + TY L+ + G G + G P V
Sbjct: 405 QPGKAKEVFLMMRKERRKPNVVTYNALIDAY-GSNGFLAEAVEIFRQMEQDGIKPNVVSV 463
Query: 297 TIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEMGK 352
+ + K + +RG+ + YN + + N E+ + +++ M K
Sbjct: 464 CTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK 523
Query: 353 K 353
K
Sbjct: 524 K 524
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 109/259 (42%), Gaps = 7/259 (2%)
Query: 16 ELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAM 74
+L DI + D ++ L + G +R+ K EVF +M N+ T N ++DA
Sbjct: 376 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 435
Query: 75 CGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDV 133
+ EA + ++ ++ +KP+ V L+ + + + G +
Sbjct: 436 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNT 495
Query: 134 EAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFE 193
A + + + +A+ L+++MR K++ + T+ ++I C +A +
Sbjct: 496 AAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV-TFTILISGSCRMSKYPEAISYLK 554
Query: 194 EMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLR 249
EM + I + SV+ + +V EA I +++ + D+ Y ++
Sbjct: 555 EMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASE 614
Query: 250 RAGEATQVFREMIKRGCEP 268
+ G+A ++F EM G EP
Sbjct: 615 KWGKACELFLEMEANGIEP 633
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 135/322 (41%), Gaps = 43/322 (13%)
Query: 35 ALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWV 94
A+ + A EL+K + ++ M + T ++ C EA + ++++
Sbjct: 501 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 560
Query: 95 KP-DGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
P Y ++ + +G + EA I+N M G EPDV A M+ + G+A
Sbjct: 561 IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKAC 620
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVF---EEMRERGIQIDNLTLGSV 210
+LF M ++ ++ L+ + NKG Q VF + MRE+ I G+V
Sbjct: 621 ELFLEMEANGIEPDSIACSALMRAF--NKG--GQPSNVFVLMDLMREKEIPFT----GAV 672
Query: 211 VYGLL-AKHRVREAYQIVDRIGVMD---ISVYHGLIKGLLKL-RRAGEA---TQVFREMI 262
+ + A + ++E + +D I +MD S+ GL +L L ++G+ ++F ++I
Sbjct: 673 FFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKII 732
Query: 263 KRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNR 322
G + TY +LL+ L+ VG R+YI+ +E +
Sbjct: 733 ASGVGINLKTYAILLE-----------------------HLLAVGNWRKYIEVLEWMSGA 769
Query: 323 GLEVPRFDYNKFLHYFSNEEGV 344
G++ Y + + G+
Sbjct: 770 GIQPSNQMYRDIISFGERSAGI 791
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 6/216 (2%)
Query: 69 KVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADE 127
KVV +C +E+A+ VVL + K + PD Y +I G ++ +A ++N M +
Sbjct: 296 KVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKK 355
Query: 128 GFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQ 187
+ V +++ ++ EA LF+ R + L Y + + G + +
Sbjct: 356 RKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNI-SLDRVCYNVAFDALGKLGKVEE 414
Query: 188 AQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI---VDRIG-VMDISVYHGLIK 243
A ++F EM +GI D + +++ G + + +A+ + +D G DI +Y+ L
Sbjct: 415 AIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAG 474
Query: 244 GLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
GL A EA + + M RG +PT T+ M+++G
Sbjct: 475 GLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEG 510
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 99/247 (40%), Gaps = 44/247 (17%)
Query: 98 GVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFE 157
G+ Y+ ++RG C + + +A + M G +PDV ++E K +A+ +F
Sbjct: 291 GIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFN 350
Query: 158 TMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAK 217
M LK+ + +++ C G S+A +F+E RE I +D +
Sbjct: 351 KM-LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVC----------- 398
Query: 218 HRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLL 277
Y+ L KL + EA ++FREM +G P + Y L+
Sbjct: 399 --------------------YNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLI 438
Query: 278 QG-HLGRRGRKGTDPLVNFD-----------TIFVGGLVKVGKAREYIKYVERVMNRGLE 325
G L + D ++ D + GGL G A+E + ++ + NRG++
Sbjct: 439 GGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVK 498
Query: 326 VPRFDYN 332
+N
Sbjct: 499 PTYVTHN 505
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
V PD V Y +I +C DL + ++ M PDV +++ + N E +
Sbjct: 694 VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSRE-M 752
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
K F+ + + Y ++I W C G + +A+++F++M E G+ D +++
Sbjct: 753 KAFDV-------KPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIAC 805
Query: 214 LLAKHRVREAYQIVDRI---GV-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPT 269
++EA I DR+ GV D+ Y LI G + +A ++ +EM+++G +PT
Sbjct: 806 CCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Query: 270 MHTYIMLLQGHLGRRG 285
+ + L +G
Sbjct: 866 KASLSAVHYAKLKAKG 881
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 25/290 (8%)
Query: 2 LDVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTL-GGARELKKCVEVFHLM---NS 57
D +GK ++ EL ++ + A D VI TL GG KC + F LM +
Sbjct: 403 FDALGKLGKVEEAIELFREMTGKGIAPD---VINYTTLIGGCCLQGKCSDAFDLMIEMDG 459
Query: 58 NGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE--WVKPDGVCYKHLIRGFCDKGDLI 115
G ++ N + + L +EA + LK+ E VKP V + +I G D G+L
Sbjct: 460 TGKTPDIVIYNVLAGGLATNGLAQEA-FETLKMMENRGVKPTYVTHNMVIEGLIDAGELD 518
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMD-ELGLSTYRL 174
+A + + + E D V+ G FE R R++ L S Y
Sbjct: 519 KAEAFYESLEHKSRENDASMVKGFC-------AAGCLDHAFE--RFIRLEFPLPKSVYFT 569
Query: 175 VIKWMC-NKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQ----IVDR 229
+ +C K +S+AQ + + M + G++ + G ++ + VR+A + +V +
Sbjct: 570 LFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTK 629
Query: 230 IGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
V D+ Y +I +L +A +F +M +R +P + TY +LL
Sbjct: 630 KIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS 679
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
VKPD Y LI C GDL EA +I++ M + G +PD ++ K+ EA
Sbjct: 757 VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAK 816
Query: 154 KLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
+F+ RM E G+ Y +I C G + +A K+ +EM E+GI+ +L +
Sbjct: 817 MIFD-----RMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSA 871
Query: 210 VVYGLLAKHRVR 221
V Y L +R
Sbjct: 872 VHYAKLKAKGLR 883
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 47/285 (16%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
V+P+ Y LI +C ++ +A + + ++ + PD+ M+ T ++N+ +A
Sbjct: 596 VEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAY 655
Query: 154 KLFETMR--------------LKRMDELGLS-------------TYRLVIKWMCNKGMMS 186
LFE M+ L EL + Y ++I C+ +
Sbjct: 656 ALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLK 715
Query: 187 QAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVRE--AYQIVDRIGVMDISVYHGLIKG 244
+ +F++M+ R I D +T ++ ++ RE A+ + D+ Y LI
Sbjct: 716 KVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKP-----DVFYYTVLIDW 770
Query: 245 LLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQ-----GHL-------GRRGRKGTDPL 292
K+ GEA ++F +MI+ G +P Y L+ G+L R G P
Sbjct: 771 QCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPD 830
Query: 293 VNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHY 337
V T + G + G + +K V+ ++ +G++ + + +HY
Sbjct: 831 VVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSA-VHY 874
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 82 EAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMM 140
+AK V L + KE KP+ V Y LI + G L EA +I+ M +G +P+V +V ++
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 141 ETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGI 200
+ + + + + ++ L + Y I N + +A +++ MR++ +
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGIN-LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 394
Query: 201 QIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDIS----VYHGLIKGLLKLRRAGEATQ 256
+ D++T ++ G + EA + + + I VY ++ K + EA
Sbjct: 395 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 454
Query: 257 VFREMIKRGCEPTMHTYIMLLQGH 280
+F +M GCEP + Y +L +
Sbjct: 455 IFNQMKMAGCEPDVIAYTSMLHAY 478
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 142/361 (39%), Gaps = 60/361 (16%)
Query: 17 LLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMC 75
L+ D+ R A R T+ + G + ++ +EV M NG G +L T N V+ A
Sbjct: 68 LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSA-- 125
Query: 76 GYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEA 135
YK G Y + F +L++ +K+ PD
Sbjct: 126 -YK------------------SGRQYSKALSYF----ELMKGAKV---------RPDTTT 153
Query: 136 VEKMMETLFKVNQGGEALKLFETMRLKRMD-ELGLSTYRLVIKWMCNKGMMSQAQKVFEE 194
++ L K+ Q +AL LF +MR KR + + T+ ++ KG + + VFE
Sbjct: 154 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 213
Query: 195 MRERGIQIDNLTLGSVVYGLLAKHRVR-EAYQIVDRIG----VMDISVYHGLIKGLLKLR 249
M G++ N+ + + G A H + A ++ I + D+ Y L+ + R
Sbjct: 214 MVAEGLK-PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 272
Query: 250 RAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG-------------RKGTDPLVNFD 296
+ G+A +VF M K +P + TY L+ + G G + G P V
Sbjct: 273 QPGKAKEVFLMMRKERRKPNVVTYNALIDAY-GSNGFLAEAVEIFRQMEQDGIKPNVVSV 331
Query: 297 TIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEMGK 352
+ + K + +RG+ + YN + + N E+ + +++ M K
Sbjct: 332 CTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK 391
Query: 353 K 353
K
Sbjct: 392 K 392
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 109/259 (42%), Gaps = 7/259 (2%)
Query: 16 ELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAM 74
+L DI + D ++ L + G +R+ K EVF +M N+ T N ++DA
Sbjct: 244 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 303
Query: 75 CGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDV 133
+ EA + ++ ++ +KP+ V L+ + + + G +
Sbjct: 304 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNT 363
Query: 134 EAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFE 193
A + + + +A+ L+++MR K++ + T+ ++I C +A +
Sbjct: 364 AAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV-TFTILISGSCRMSKYPEAISYLK 422
Query: 194 EMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLR 249
EM + I + SV+ + +V EA I +++ + D+ Y ++
Sbjct: 423 EMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASE 482
Query: 250 RAGEATQVFREMIKRGCEP 268
+ G+A ++F EM G EP
Sbjct: 483 KWGKACELFLEMEANGIEP 501
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 145/343 (42%), Gaps = 47/343 (13%)
Query: 35 ALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWV 94
A+ + A EL+K + ++ M + T ++ C EA + ++++
Sbjct: 369 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 428
Query: 95 KP-DGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
P Y ++ + +G + EA I+N M G EPDV A M+ + G+A
Sbjct: 429 IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKAC 488
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVF---EEMRERGIQIDNLTLGSV 210
+LF M ++ ++ L+ + NKG Q VF + MRE+ I G+V
Sbjct: 489 ELFLEMEANGIEPDSIACSALMRAF--NKG--GQPSNVFVLMDLMREKEIPFT----GAV 540
Query: 211 VYGLL-AKHRVREAYQIVDRIGVMD---ISVYHGLIKGLLKL-RRAGEA---TQVFREMI 262
+ + A + ++E + +D I +MD S+ GL +L L ++G+ ++F ++I
Sbjct: 541 FFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKII 600
Query: 263 KRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNR 322
G + TY +LL+ L+ VG R+YI+ +E +
Sbjct: 601 ASGVGINLKTYAILLE-----------------------HLLAVGNWRKYIEVLEWMSGA 637
Query: 323 GLEVPRFDYNKFLHYFSNEEGV----LMFEEMGKKLREVGLVD 361
G++ Y + + G+ L+ +++G+ E + D
Sbjct: 638 GIQPSNQMYRDIISFGERSAGIEFEPLIRQKLGEMREECKIND 680
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 128/328 (39%), Gaps = 83/328 (25%)
Query: 61 GYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLIEASK 119
G + + LN V+++C ++ +E A+ +++ ++ V PD + Y LI+G+ + EA
Sbjct: 10 GISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYA 69
Query: 120 IWNLMADEGFEPDVE-----------------------------------AVEKMMETLF 144
+ M + G EPDV + +M F
Sbjct: 70 VTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYF 129
Query: 145 KVNQGGEALK-LFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
K+ + GEA K L E + L + G+ TY +++ +C G A ++F+ +
Sbjct: 130 KLGRHGEAFKILHEDIHLAGLVP-GIDTYNILLDALCKSGHTDNAIELFKHL-------- 180
Query: 204 NLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIK 263
K RV+ ++ Y+ LI GL K RR G + RE+ K
Sbjct: 181 -------------KSRVKP-----------ELMTYNILINGLCKSRRVGSVDWMMRELKK 216
Query: 264 RGCEPTMHTYIMLLQGHL-GRRGRKGTDPLV-------NFD----TIFVGGLVKVGKARE 311
G P TY +L+ + +R KG + FD V L+K G+A E
Sbjct: 217 SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEE 276
Query: 312 YIKYVERVMNRGLEVPRF-DYNKFLHYF 338
+ + ++ G YN L+ +
Sbjct: 277 AYECMHELVRSGTRSQDIVSYNTLLNLY 304
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 110/293 (37%), Gaps = 63/293 (21%)
Query: 64 LETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNL 123
++T N ++DA+C + A + LK VKP+ + Y LI G C + +
Sbjct: 154 IDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRE 213
Query: 124 MADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKG 183
+ G+ P+ M++ FK KR++ KG
Sbjct: 214 LKKSGYTPNAVTYTTMLKMYFKT---------------KRIE----------------KG 242
Query: 184 MMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD---RIGV--MDISVY 238
+ ++F +M++ G D +VV L+ R EAY+ + R G DI Y
Sbjct: 243 L-----QLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSY 297
Query: 239 HGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG------------HLGRRGR 286
+ L+ K + E+ +G +P +T+ +++ G HL G
Sbjct: 298 NTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGE 357
Query: 287 KGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMN--RGLEV-PRFDYNKFLH 336
G P V + GL K G +V+R M +EV F Y +H
Sbjct: 358 MGMQPSVVTCNCLIDGLCKAG-------HVDRAMRLFASMEVRDEFTYTSVVH 403
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 5/188 (2%)
Query: 96 PDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKL 155
P + Y ++I G C +G E+ K+ M D G EP + + L + AL L
Sbjct: 472 PGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDL 531
Query: 156 FETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLL 215
+ MR E + ++K +C G A K +++ G + + + GL+
Sbjct: 532 LKKMRFYGF-EPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLI 590
Query: 216 AKHRVREAYQIVDRIGV----MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMH 271
V ++ I D+ YH LIK L K R EA +F EM+ +G +PT+
Sbjct: 591 KNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVA 650
Query: 272 TYIMLLQG 279
TY ++ G
Sbjct: 651 TYNSMIDG 658
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 2/166 (1%)
Query: 2 LDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGY 60
+D + K+ +D EL DI D + + ++ L A + +F+ M S G
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Query: 61 GYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVK-PDGVCYKHLIRGFCDKGDLIEASK 119
+ T N ++D C ++ ++++ E K PD + Y LI G C G EA
Sbjct: 646 KPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIF 705
Query: 120 IWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMD 165
WN M + P+ +++ L K GEAL F M K M+
Sbjct: 706 RWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEME 751
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
Query: 128 GFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQ 187
G PDV A +++ L K + EA LF M K + ++TY +I C +G + +
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP-TVATYNSMIDGWCKEGEIDR 667
Query: 188 AQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDIS----VYHGLIK 243
M E D +T S+++GL A R EA + + D + LI+
Sbjct: 668 GLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQ 727
Query: 244 GLLKLRRAGEATQVFREMIKRGCEPTMHTY 273
GL K +GEA FREM ++ EP Y
Sbjct: 728 GLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 54 LMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE--WVKPDGVCYKHLIRGFCDK 111
M+ +G+ + L LV+EA V +++E P+ Y L+
Sbjct: 138 FMSPGAFGFFIRCLGNA-------GLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKS 190
Query: 112 G----DLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLF-ETMRLKRMDE 166
+L+EA M D GF D + +++ + AL +F E + +DE
Sbjct: 191 NSSSVELVEAR--LKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDE 248
Query: 167 LGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI 226
+ST +++ C G + +A ++ E + ER I+++ T +++G + + R+ +A+Q+
Sbjct: 249 -HIST--ILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQL 305
Query: 227 VDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEP 268
+++ M DI++Y LI GL K + A ++ E+ + G P
Sbjct: 306 FEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP 351
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 127/327 (38%), Gaps = 57/327 (17%)
Query: 63 NLETLNKVVDAMCGYKLVEEAKYVV--LKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKI 120
N+ N ++ C +E A V LKLK ++ P + +I GFC +GD + + ++
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFM-PTLETFGTMINGFCKEGDFVASDRL 297
Query: 121 WNLMADEGF-----------------------------------EPDVEAVEKMMETLFK 145
+ + + G +PDV ++ L K
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 146 VNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL 205
+ A+ + K + LS Y +I+ C A K+ +M ERG + D +
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLS-YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIV 416
Query: 206 TLGSVVYGLLAKHRVREA----YQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREM 261
T G +++GL+ + +A +++DR D ++Y+ L+ GL K R A +F EM
Sbjct: 417 TYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEM 476
Query: 262 IKRGCEPTMHTYIMLLQGHLGRRG-------------RKGTDPLVNFDTIFVGGLVKVGK 308
+ R P + Y L+ G + R G KG V + G + G
Sbjct: 477 LDRNILPDAYVYATLIDGFI-RSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGM 535
Query: 309 AREYIKYVERVMNRGLEVPRFDYNKFL 335
E + + R+ L +F Y+ +
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTII 562
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 123/298 (41%), Gaps = 16/298 (5%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATD-RTFVIALRTLGGARELKKCVEVFHLMNSNG 59
++ KS+ D+ +LL +A R D T+ I + L + + V + + G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLIEAS 118
+ N ++ +C AK + + L + PD Y LI GF GD EA
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRL 174
K+++L ++G + DV M++ + EAL + RM+E L TY
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC-----MNRMNEEHLVPDKFTYST 560
Query: 175 VIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMD 234
+I + M+ A K+F M + + + +T S++ G + + A + + + D
Sbjct: 561 IIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRD 620
Query: 235 ----ISVYHGLIKGLLKLRRAGEATQVFRE-MIKRGCEPTMHTYIMLLQGHLGRRGRK 287
+ Y LI+ L K E + E M+ C P T+ LLQG + + K
Sbjct: 621 LVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGK 678
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 93/228 (40%), Gaps = 40/228 (17%)
Query: 91 KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDV----------------- 133
K+ + P+ + Y LI+ +C + ASK+ MA+ G +PD+
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 134 EAV------------------EKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLV 175
+AV +M L K + A LF M L R Y +
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEM-LDRNILPDAYVYATL 491
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG---- 231
I G +A+KVF E+G+++D + +++ G + EA ++R+
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 232 VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
V D Y +I G +K + A ++FR M K C+P + TY L+ G
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLING 599
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 110 DKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGE-ALKLFETMRLKRMDELG 168
D +++ + W+ + D+ F + + +F Q E +KLF+ + ++ DE
Sbjct: 37 DTVSILKTQQNWSQILDDCFADEEVRFVDISPFVFDRIQDVEIGVKLFDWLSSEKKDEFF 96
Query: 169 LSTYRL--VIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQI 226
+ + +K + + ++ + V +R +++ + L V++ + +A +I
Sbjct: 97 SNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEI 156
Query: 227 VDRI-----GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG-- 279
D + V D+ + L+ L+K RR G+A +V+ EM RG ++ +L++G
Sbjct: 157 YDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMC 216
Query: 280 -----HLGRR---GR--KGTDPLVNFDTIFVGGLVKVG 307
+GR+ GR KG P + F +GG K+G
Sbjct: 217 NEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLG 254
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 34/205 (16%)
Query: 77 YKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD-EGFEPDVE 134
Y++ E + V+ L+ E VK H++ + + G L +A +I++ + + PDV
Sbjct: 112 YRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVI 171
Query: 135 AVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEE 194
A ++ L K + G+A K+++ M R D + + +++K MCN+G + +K+ E
Sbjct: 172 ACNSLLSLLVKSRRLGDARKVYDEM-CDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEG 230
Query: 195 MRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEA 254
+G + +I Y+ +I G KL A
Sbjct: 231 RWGKGC-------------------------------IPNIVFYNTIIGGYCKLGDIENA 259
Query: 255 TQVFREMIKRGCEPTMHTYIMLLQG 279
VF+E+ +G PT+ T+ ++ G
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMING 284
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 120/281 (42%), Gaps = 13/281 (4%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRT-FVIALRTLGGARELKKCVEVFHLMNSNG 59
+++ GK R ++ +LL ++A D T + + L + +K+ + VFH M + G
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEAS 118
N T + +++ ++ + + L++K PD Y LI F + G E
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGG---EALKLFETMRLKRMDELGLSTYRLV 175
+++ M +E EPD+E E + +F +GG +A K+ + M + Y V
Sbjct: 408 TLFHDMVEENIEPDMETYEGI---IFACGKGGLHEDARKILQYMTANDIVP-SSKAYTGV 463
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDI 235
I+ + +A F M E G T S++Y V+E+ I+ R+ I
Sbjct: 464 IEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
Query: 236 S----VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHT 272
++ I+ + + EA + + +M K C+P T
Sbjct: 524 PRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERT 564
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 109/271 (40%), Gaps = 53/271 (19%)
Query: 27 ATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYV 86
+ + I + LG L KC+EVF M S G ++ + +++A E + +
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 87 VLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD---EGFEPDVEAVEKMMET 142
+ ++K E + P + Y +I C +G L + + L A+ EG +PD+
Sbjct: 199 LDRMKNEKISPSILTYNTVINA-CARGGL-DWEGLLGLFAEMRHEGIQPDI--------- 247
Query: 143 LFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQI 202
TY ++ +G+ +A+ VF M + GI
Sbjct: 248 ---------------------------VTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVP 280
Query: 203 DNLTLGSVVYGLLAKHRVREAYQIVDRIGVM-------DISVYHGLIKGLLKLRRAGEAT 255
D T +V ++R ++ D +G M DI+ Y+ L++ K EA
Sbjct: 281 DLTTYSHLVETF---GKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAM 337
Query: 256 QVFREMIKRGCEPTMHTYIMLLQGHLGRRGR 286
VF +M GC P +TY +LL G+ GR
Sbjct: 338 GVFHQMQAAGCTPNANTYSVLLN-LFGQSGR 367
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 9/207 (4%)
Query: 87 VLKLKEWVKPDGVCYKHLIRGFCDKGD--LIEASKIWNLMADEGFEPDVEAVEKMMETLF 144
+LK + +P + L+ C D + ++ NLM + G EPD + + +L
Sbjct: 111 ILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC 170
Query: 145 KVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRER-GIQID 203
+ + EA L + + K TY ++K +C + + +EMR+ ++ D
Sbjct: 171 ETGRVDEAKDLMKELTEKHSPP-DTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPD 229
Query: 204 NLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFR 259
++ ++ + +REA +V ++G D +Y+ ++KG L + EA V++
Sbjct: 230 LVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYK 289
Query: 260 EMIKRGCEPTMHTYIMLLQGHLGRRGR 286
+M + G EP TY L+ G L + GR
Sbjct: 290 KMKEEGVEPDQITYNTLIFG-LSKAGR 315
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 20/250 (8%)
Query: 11 IDLFWELLSDIARRRFATDR-TFVIALRTLGGARE--LKKCVEVFHLMNSNGYGYNLETL 67
+ LF +L ++ F R TF+I L A + + V +LM +NG + T
Sbjct: 105 VKLFQHILK--SQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTT 162
Query: 68 NKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD 126
+ V ++C V+EAK ++ +L E PD Y L++ C DL + + M D
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD 222
Query: 127 E-GFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLST----YRLVIKWMCN 181
+ +PD+ + +++ + EA+ L + ++ G Y ++K C
Sbjct: 223 DFDVKPDLVSFTILIDNVCNSKNLREAMYL-----VSKLGNAGFKPDCFLYNTIMKGFCT 277
Query: 182 KGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA----YQIVDRIGVMDISV 237
S+A V+++M+E G++ D +T ++++GL RV EA +VD D +
Sbjct: 278 LSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT 337
Query: 238 YHGLIKGLLK 247
Y L+ G+ +
Sbjct: 338 YTSLMNGMCR 347
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 16/270 (5%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGY 60
+LD++ R + E+ I +F D + AL A + VE M S G
Sbjct: 300 ILDLISAKRLTEA-KEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGK 358
Query: 61 GYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGV-----CYKHLIRGFCDKGDLI 115
+ TL+K+ +C + + ++K E + G Y +I C G +
Sbjct: 359 LPAIRTLSKLSKNLCRHDKSDH----LIKAYELLSSKGYFSELQSYSLMISFLCKAGRVR 414
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLV 175
E+ M EG PDV ++E K A KL++ M ++ ++ L+TY ++
Sbjct: 415 ESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC-KMNLTTYNVL 473
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDI 235
I+ + +G ++ ++F++M ERGI+ D S++ GL + ++ A ++ + D
Sbjct: 474 IRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDH 533
Query: 236 S-----VYHGLIKGLLKLRRAGEATQVFRE 260
V + L +GEA+Q+ RE
Sbjct: 534 KTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 81/160 (50%), Gaps = 5/160 (3%)
Query: 124 MADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKG 183
M G P + + K+ + L + ++ +K +E + K L +Y L+I ++C G
Sbjct: 353 MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFS-ELQSYSLMISFLCKAG 411
Query: 184 MMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MDISVYH 239
+ ++ +EM++ G+ D +++ +R A ++ D + V M+++ Y+
Sbjct: 412 RVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYN 471
Query: 240 GLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
LI+ L + A E+ ++F +M++RG EP Y+ L++G
Sbjct: 472 VLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEG 511
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 136/344 (39%), Gaps = 27/344 (7%)
Query: 33 VIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE 92
+ L +L R ++F M G N+ N +V A E+A+ ++ +++E
Sbjct: 172 TVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEE 231
Query: 93 -WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGE 151
V PD Y LI +C K EA + + M G P++ + + + E
Sbjct: 232 KGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMRE 291
Query: 152 ALKLFETMRLKRMDELGLS--TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
A +LF ++ D++ + TY +I C + +A ++ E M RG +T S
Sbjct: 292 ATRLFREIK----DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNS 347
Query: 210 VVYGLLAKHRVREAYQIVDRIGVMDIS----VYHGLIKGLLKLRRAGEATQVFREMIKRG 265
++ L R+REA +++ + I + LI K+ A +V ++MI+ G
Sbjct: 348 ILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESG 407
Query: 266 CEPTMHTYIMLLQG------------HLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYI 313
+ M++Y L+ G L KG P + V G K E
Sbjct: 408 LKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEIT 467
Query: 314 KYVERVMNRGLEVPRFDYNKFLHYFSNEEGV----LMFEEMGKK 353
K +E RGL Y + E V ++FE M KK
Sbjct: 468 KLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKK 511
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 134/334 (40%), Gaps = 56/334 (16%)
Query: 11 IDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
+D F E D+ RFA A+ A L + VF + +++LN +
Sbjct: 103 LDGFIENRPDLKSERFAAH-----AIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNAL 157
Query: 71 VDAMCGYKLVEEAKYVVLKLKEW--VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEG 128
+ A K +EAK V +++ + ++PD Y +I+ FC+ G + I M +G
Sbjct: 158 LFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKG 217
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQA 188
+P+ + M+ + ++ E K+ M+ R +G+STY + I+ +C + +A
Sbjct: 218 IKPNSSSFGLMISGFYAEDKSDEVGKVLAMMK-DRGVNIGVSTYNIRIQSLCKRKKSKEA 276
Query: 189 QKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKL 248
+ + + M G++ + +T Y LI G
Sbjct: 277 KALLDGMLSAGMKPNTVT-------------------------------YSHLIHGFCNE 305
Query: 249 RRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG-------------RKGTDPLVNF 295
EA ++F+ M+ RGC+P Y L+ +L + G K P +
Sbjct: 306 DDFEEAKKLFKIMVNRGCKPDSECYFTLIY-YLCKGGDFETALSLCKESMEKNWVPSFSI 364
Query: 296 DTIFVGGLV---KVGKAREYIKYVERVMNRGLEV 326
V GL KV +A+E I V+ R +E+
Sbjct: 365 MKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVEL 398
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLV 175
+A +++ M+ GF P+ A+ MM+ FK+N AL++FE +R + ++ +
Sbjct: 126 KAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFR-----NFFSFDIA 180
Query: 176 IKWMCNKGM---MSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV 232
+ C++G + + V + M G + G ++ V EA+Q+V +
Sbjct: 181 LSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMIC 240
Query: 233 MDISV----YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL 281
ISV + L+ G + +A +F +MI+ GC P + TY L++G +
Sbjct: 241 SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFV 293
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 110/256 (42%), Gaps = 9/256 (3%)
Query: 30 RTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVV-- 87
R F++ L K +EV+ M+S G+ N +N ++D +V A +
Sbjct: 109 RVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEG 168
Query: 88 LKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVN 147
++ + + D RG +GDL+ + M EGF P+ E +++ +
Sbjct: 169 IRFRNFFSFDIALSHFCSRG--GRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTG 226
Query: 148 QGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTL 207
EA ++ M + + ++ + +++ G +A +F +M + G + +T
Sbjct: 227 CVSEAFQVVGLMICSGI-SVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTY 285
Query: 208 GSVVYGLLAKHRVREAYQIVDRIG----VMDISVYHGLIKGLLKLRRAGEATQVFREMIK 263
S++ G + V EA+ ++ ++ DI + + +I +L R EA +VF + K
Sbjct: 286 TSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEK 345
Query: 264 RGCEPTMHTYIMLLQG 279
R P +T+ +L
Sbjct: 346 RKLVPDQYTFASILSS 361
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Query: 90 LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
L+ + P + Y +I GFC + + +A ++ + MA +G PDV ++ K +
Sbjct: 2 LRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRV 61
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
+++F M +R TY +I C G + AQ + EM G+ D +T
Sbjct: 62 DNGMEIFCEMH-RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 210 VVYGLLAKHRVREAYQIVDRI 230
++ GL +K +R+A+ I++ +
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 45/183 (24%)
Query: 97 DGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLF 156
D Y +I G C G EA I+ + G +PDV+
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQ---------------------- 50
Query: 157 ETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLA 216
TY ++I++ + +A+K++ EM RG+ D +T S+++GL
Sbjct: 51 --------------TYNMMIRF----SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCK 92
Query: 217 KHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIML 276
++++ +A ++ S ++ LI G K R + +F EM +RG + TY L
Sbjct: 93 QNKLAQARKVSK-----SCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTL 147
Query: 277 LQG 279
+ G
Sbjct: 148 IHG 150
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 136/342 (39%), Gaps = 27/342 (7%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGD 113
M S G N L+ + C ++ +++ +K + ++PD V + I C G
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 114 LIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYR 173
L EA+ + + G D +V +++ KV + EA+KL + RL+ + Y
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRP----NIFVYS 377
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI--- 230
+ +C+ G M +A +F+E+ E G+ D + +++ G R +A+Q +
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKS 437
Query: 231 -GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH--------- 280
++ LI + +A VFR M G + + TY L+ G+
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 281 ---LGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHY 337
+ G P V I + +V G E + + ++ RG + +
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 338 FSN----EEGVLMFEEMGKKLREVGLVDLADILERY--GQKM 373
FS +E +++ M + +V + +L Y Q+M
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRM 599
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Query: 40 GGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDG 98
G +L K E+ M S G ++ T N ++ +M ++EA ++ +L + P
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 99 VCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFET 158
+ + +I GF +GD EA +W MAD +PDV ++ K + +A+ LF
Sbjct: 549 LAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNK 608
Query: 159 MRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKH 218
+ L + + Y +I C+ G + +A ++ M +RG+ + T ++V GL K
Sbjct: 609 L-LDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKR 667
Query: 219 RVRE 222
V
Sbjct: 668 FVNS 671
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 99/257 (38%), Gaps = 41/257 (15%)
Query: 68 NKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDK-GDLIEASKIWNLMAD 126
++D C ++A L + P + ++ G C + G + +A ++ M
Sbjct: 412 TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT 471
Query: 127 EGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMS 186
EG + DV +M K +Q + +L + MR + ++TY ++I M +G +
Sbjct: 472 EGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP-DVATYNILIHSMVVRGYID 530
Query: 187 QAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY---------------------- 224
+A ++ E+ RG L V+ G + +EA+
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 225 -----------------QIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCE 267
+++D D+ +Y+ LI G + +A ++ M++RG
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 268 PTMHTYIMLLQGHLGRR 284
P T+ L+ G G+R
Sbjct: 651 PNESTHHALVLGLEGKR 667
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 136/342 (39%), Gaps = 27/342 (7%)
Query: 55 MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGD 113
M S G N L+ + C ++ +++ +K + ++PD V + I C G
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 114 LIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYR 173
L EA+ + + G D +V +++ KV + EA+KL + RL+ + Y
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRP----NIFVYS 377
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI--- 230
+ +C+ G M +A +F+E+ E G+ D + +++ G R +A+Q +
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKS 437
Query: 231 -GVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH--------- 280
++ LI + +A VFR M G + + TY L+ G+
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 281 ---LGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHY 337
+ G P V I + +V G E + + ++ RG + +
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 338 FSN----EEGVLMFEEMGKKLREVGLVDLADILERY--GQKM 373
FS +E +++ M + +V + +L Y Q+M
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRM 599
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Query: 40 GGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDG 98
G +L K E+ M S G ++ T N ++ +M ++EA ++ +L + P
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 99 VCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFET 158
+ + +I GF +GD EA +W MAD +PDV ++ K + +A+ LF
Sbjct: 549 LAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNK 608
Query: 159 MRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKH 218
+ L + + Y +I C+ G + +A ++ M +RG+ + T ++V GL K
Sbjct: 609 L-LDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKR 667
Query: 219 RVRE 222
V
Sbjct: 668 FVNS 671
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 99/257 (38%), Gaps = 41/257 (15%)
Query: 68 NKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDK-GDLIEASKIWNLMAD 126
++D C ++A L + P + ++ G C + G + +A ++ M
Sbjct: 412 TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT 471
Query: 127 EGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMS 186
EG + DV +M K +Q + +L + MR + ++TY ++I M +G +
Sbjct: 472 EGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP-DVATYNILIHSMVVRGYID 530
Query: 187 QAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY---------------------- 224
+A ++ E+ RG L V+ G + +EA+
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 225 -----------------QIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCE 267
+++D D+ +Y+ LI G + +A ++ M++RG
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 268 PTMHTYIMLLQGHLGRR 284
P T+ L+ G G+R
Sbjct: 651 PNESTHHALVLGLEGKR 667
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 63 NLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIW 121
N++T+ V+ L +EA +V+ K E+ V D V Y +IR F DKGDL A +
Sbjct: 129 NVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLI 188
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCN 181
M G PDV M+ + +A +L + M K L TY +++ +C
Sbjct: 189 KEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMS-KHDCVLNSVTYSRILEGVCK 247
Query: 182 KGMMSQAQKVFEEM-RERG---IQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG------ 231
G M +A ++ EM +E G I + +T V+ K RV EA ++DR+G
Sbjct: 248 SGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 232 ------VM---------DISVYHGLIKGLLKL-------------------RRAGEATQV 257
V+ D+ LI L+KL +R EA ++
Sbjct: 308 NRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKI 367
Query: 258 FREMIKRGCEP 268
FR M+ RG P
Sbjct: 368 FRLMLVRGVRP 378
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 14 FWELLSDI-ARRRFA----TDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLN 68
++ L+ D+ A+ R + T F ++ A+ +K + F+ M + + LN
Sbjct: 99 YFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLN 158
Query: 69 KVVDAMCGYKLVEEAKYVVLKLKEW--VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD 126
+++D + ++ + + + K V P+ Y L++ FC DL A +++ M +
Sbjct: 159 RILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLE 218
Query: 127 EGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMS 186
PDV++ + +++ + Q A++L + M K G R +I +C++GM
Sbjct: 219 RDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNK-----GFVPDRTLIGGLCDQGMFD 273
Query: 187 QAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI 230
+ +K EEM +G +V G + +V EA +V+ +
Sbjct: 274 EGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVV 317
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 126/320 (39%), Gaps = 91/320 (28%)
Query: 32 FVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLK 91
F ++LR L+ + F M + G + T N +++ C +K ++EA+ + +++K
Sbjct: 265 FFLSLR-------LETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMK 317
Query: 92 -EWVKPDGVCYKHLIRGF-----------------------------------CDKGDLI 115
+ P V Y +I+G+ CD G ++
Sbjct: 318 GNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMV 377
Query: 116 EASKIWNLMADEGFEP-----------------DVEAVEKMMETLFKVNQGGE------- 151
EA I M + P D+ A ++++ + +N E
Sbjct: 378 EAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVL 437
Query: 152 ------------ALKLFET-------MRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVF 192
A+KL +T +R + E+ S Y +I+++CN G ++A+ +F
Sbjct: 438 IENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLF 497
Query: 193 EEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIV---DRIGVM-DISVYHGLIKGLLKL 248
++ +RG+Q D L +++ G + +Y+I+ R GV + + Y LIK +
Sbjct: 498 RQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSK 556
Query: 249 RRAGEATQVFREMIKRGCEP 268
G+A M++ G P
Sbjct: 557 GEPGDAKTALDSMVEDGHVP 576
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 106/263 (40%), Gaps = 43/263 (16%)
Query: 51 VFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL--KEWVKPDGVCYKHLIRGF 108
+F M S+G N T + ++ +C + EAK ++ + K D + L+
Sbjct: 347 IFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQ 406
Query: 109 CDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETM-------RL 161
GD+ A+++ MA + ++E K + A+KL +T+ R
Sbjct: 407 SKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRH 466
Query: 162 KRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVR 221
+ E+ S Y +I+++CN G ++A+ +F ++ +RG+Q
Sbjct: 467 QDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-------------------- 506
Query: 222 EAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL 281
D + LI+G K + ++ + M +RG + Y +L++ ++
Sbjct: 507 ------------DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYM 554
Query: 282 GRRGRKGTDPLVNFDTIFVGGLV 304
+G G D D++ G V
Sbjct: 555 S-KGEPG-DAKTALDSMVEDGHV 575
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 106/243 (43%), Gaps = 6/243 (2%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T + ++ LG +L + M G ++ + ++++ +V+E+ + K+
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 91 KEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
K+ V+ Y L + +G + A + +N M EG EP M+ F +
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRL 271
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
AL+ FE M+ + + +T+ +I C M +A+K+F EM+ I ++ +
Sbjct: 272 ETALRFFEDMKTRGISP-DDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTT 330
Query: 210 VVYGLLAKHRVREAYQIVDRIGVMDI----SVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
++ G LA RV + +I + + I + Y L+ GL + EA + + M+ +
Sbjct: 331 MIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKH 390
Query: 266 CEP 268
P
Sbjct: 391 IAP 393
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 41/212 (19%)
Query: 66 TLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLM 124
T +V +C +EE ++ +++E KPD Y +I+ +G+L + ++W+ M
Sbjct: 265 TFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEM 324
Query: 125 ADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGM 184
+ +PDV A Y ++ +C G
Sbjct: 325 RRDEIKPDVMA------------------------------------YGTLVVGLCKDGR 348
Query: 185 MSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQ----IVDRIGVMDISVYHG 240
+ + ++F EM+ + I ID ++ G +A +VR A +VD + DI +Y+
Sbjct: 349 VERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNA 408
Query: 241 LIKGLLKLRRAGEATQVFREMIKRGCEPTMHT 272
+IKGL + + +A ++F+ I+ EP T
Sbjct: 409 VIKGLCSVNQVDKAYKLFQVAIEEELEPDFET 440
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 9/249 (3%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
+ ++TL L + V+ M + ++ +V +C VE + +++
Sbjct: 300 AYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEM 359
Query: 91 K-EWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
K + + D Y+ LI GF G + A +W + D G+ D+ +++ L VNQ
Sbjct: 360 KGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQV 419
Query: 150 GEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS 209
+A KLF+ + + E T ++ +S V E + E G + + +
Sbjct: 420 DKAYKLFQVAIEEEL-EPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYL--T 476
Query: 210 VVYGLLAKHRVREA-----YQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKR 264
+ LL + A + I+ G +SVY+ L++ L K+ ++ +F EM K
Sbjct: 477 QFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKL 536
Query: 265 GCEPTMHTY 273
G EP +Y
Sbjct: 537 GFEPDSSSY 545
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 110/243 (45%), Gaps = 20/243 (8%)
Query: 65 ETLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGV---CYKHLIRGFCD-KGDLIEASK 119
+T ++ A C L+E A+ V+++++ V P + Y I G KG+ EA
Sbjct: 213 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAID 272
Query: 120 IWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWM 179
++ M + +P E M+ K ++ + KL+ MR + + TY ++
Sbjct: 273 VFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKP-NICTYTALVNAF 331
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVR--------EAYQIVDRIG 231
+G+ +A+++FE+++E G++ D VY L + R E + ++ +G
Sbjct: 332 AREGLCEKAEEIFEQLQEDGLEPD-----VYVYNALMESYSRAGYPYGAAEIFSLMQHMG 386
Query: 232 V-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTD 290
D + Y+ ++ + +A VF EM + G PTM ++++LL + R +
Sbjct: 387 CEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCE 446
Query: 291 PLV 293
+V
Sbjct: 447 AIV 449
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
Query: 95 KPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALK 154
KP+ Y L+ F +G +A +I+ + ++G EPDV +ME+ + A +
Sbjct: 318 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 377
Query: 155 LFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGL 214
+F M+ E ++Y +++ G+ S A+ VFEEM+ GI T+ S + L
Sbjct: 378 IFSLMQHMGC-EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP---TMKSHMLLL 433
Query: 215 LAKHRVREAYQ---IVDRIGVMDISVYHGLIKGLLKLR-RAGEAT---QVFREMIKRGCE 267
A + R+ + IV + + ++ +L L R G+ T ++ EM C
Sbjct: 434 SAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 493
Query: 268 PTMHTYIMLLQ 278
+ TY +L+
Sbjct: 494 ADISTYNILIN 504
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 47/305 (15%)
Query: 17 LLSDIARR-RFATDRTFVIALRTLGGAR-ELKKCVEVFHLMNSNGYGYNLETLNKVVDAM 74
LL ++AR + + R+F + +R+L +R L+ + + Y + ETLN +V
Sbjct: 550 LLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEY 609
Query: 75 CGYKLVEEAKYVVLKLKEWVKP-DGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDV 133
C +K + K+ + P D V Y LIR FC K L + +W ++ + PD+
Sbjct: 610 CKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDL 669
Query: 134 EAVEKMMETLFKVNQGGEALKLFETMRL--------------KRMDELGLS--------- 170
+ L + E ++LFE + + +++ LG S
Sbjct: 670 NDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKR 729
Query: 171 -----------TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGS---VVYGLLA 216
Y +IK +C + S A + +EM ++ I +LGS ++ L
Sbjct: 730 LEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKK-HIP--SLGSCLMLIPRLCR 786
Query: 217 KHRVREAYQIVDRIGVMDIS-VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIM 275
++ A+ + ++I D S V++ LIKGL + +A R M+ G Y +
Sbjct: 787 ANKAGTAFNLAEQI---DSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNV 843
Query: 276 LLQGH 280
+ QG+
Sbjct: 844 MFQGY 848
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 149/334 (44%), Gaps = 42/334 (12%)
Query: 63 NLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIW 121
N++++ KV++ +C + V+EA+ + KL + Y + G+ +K D +
Sbjct: 255 NIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDF---EDLL 311
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIK 177
+ + + +EPDV +++ +L + G E ++ ++ ++ LG T+ ++I
Sbjct: 312 SFIGEVKYEPDVFVGNRILHSLCR-RFGSERAYVY----MEELEHLGFKQDEVTFGILIG 366
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VM 233
W C +G + +A E+ +G + D + +++ GL K + + I+D + ++
Sbjct: 367 WCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMML 426
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGC-------EPTMHTYIMLLQGHLGRRGR 286
+S + ++ G K R+ EA ++ +M G +P + ++ L R +
Sbjct: 427 SLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLK 486
Query: 287 KGTDPLVNFDTIFV---GGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEG 343
+ D + F GL Y + V V++R + +P F+ L ++E+G
Sbjct: 487 RDNDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSV-LPEFNS---LIVRASEDG 542
Query: 344 VLMFEEMGKKLREVGLVDLADILERYGQKMATRD 377
++ LR L D + R+GQK++ R
Sbjct: 543 -----DLQTALR------LLDEMARWGQKLSRRS 565
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 110/243 (45%), Gaps = 20/243 (8%)
Query: 65 ETLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGV---CYKHLIRGFCD-KGDLIEASK 119
+T ++ A C L+E A+ V+++++ V P + Y I G KG+ EA
Sbjct: 191 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAID 250
Query: 120 IWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWM 179
++ M + +P E M+ K ++ + KL+ MR + + TY ++
Sbjct: 251 VFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKP-NICTYTALVNAF 309
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVR--------EAYQIVDRIG 231
+G+ +A+++FE+++E G++ D VY L + R E + ++ +G
Sbjct: 310 AREGLCEKAEEIFEQLQEDGLEPD-----VYVYNALMESYSRAGYPYGAAEIFSLMQHMG 364
Query: 232 V-MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTD 290
D + Y+ ++ + +A VF EM + G PTM ++++LL + R +
Sbjct: 365 CEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCE 424
Query: 291 PLV 293
+V
Sbjct: 425 AIV 427
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
Query: 95 KPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALK 154
KP+ Y L+ F +G +A +I+ + ++G EPDV +ME+ + A +
Sbjct: 296 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 355
Query: 155 LFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGL 214
+F M+ E ++Y +++ G+ S A+ VFEEM+ GI T+ S + L
Sbjct: 356 IFSLMQHMGC-EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP---TMKSHMLLL 411
Query: 215 LAKHRVREAYQ---IVDRIGVMDISVYHGLIKGLLKLR-RAGEAT---QVFREMIKRGCE 267
A + R+ + IV + + ++ +L L R G+ T ++ EM C
Sbjct: 412 SAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 471
Query: 268 PTMHTYIMLLQ 278
+ TY +L+
Sbjct: 472 ADISTYNILIN 482
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 119/263 (45%), Gaps = 10/263 (3%)
Query: 31 TFVIALRTLGGARELKKCVEVFH-LMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK 89
T + G + + VE+F+ + + G ++ N ++ A+C K+ A ++ +
Sbjct: 148 TLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRR 207
Query: 90 L-KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQ 148
+ ++ +KPD Y L+ G+C G + EA + + M+ GF P + ++E L
Sbjct: 208 MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGY 267
Query: 149 GGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLG 208
A ++ M K + T+ ++I+ + G + +++ + G+ +D T
Sbjct: 268 LESAKEMVSKMT-KGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYK 326
Query: 209 SVVYGLLAKHRVREAYQIVDRIGVMD-----ISVYHGLIKGLLKLRRAGEATQVFREMIK 263
+++ + ++ EA+++++ V D S+Y +IKG+ + +A F +M
Sbjct: 327 TLIPAVSKIGKIDEAFRLLNNC-VEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKV 385
Query: 264 RGCEPTMHTYIMLLQGHLGRRGR 286
+ P Y ML+ GR G+
Sbjct: 386 KAHPPNRPVYTMLIT-MCGRGGK 407
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 132/324 (40%), Gaps = 47/324 (14%)
Query: 1 MLDVVGK-SRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARE--LKKCVEVFHLMNS 57
+LDV GK R+ +L ++ + D F + ARE L++ E F + S
Sbjct: 251 ILDVFGKMGRSWRKILGVLDEMRSKGLKFDE-FTCSTVLSACAREGLLREAKEFFAELKS 309
Query: 58 NGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKP-DGVCYKHLIRGFCDKGDLIE 116
GY T N ++ + EA V+ +++E P D V Y L+ + G E
Sbjct: 310 CGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKE 369
Query: 117 ASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR---------------- 160
A+ + +M +G P+ +++ K + EALKLF +M+
Sbjct: 370 AAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS 429
Query: 161 --------------LKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQI 202
L M G S T+ ++ NKGM +VF EM+ G +
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEP 489
Query: 203 DNLTLGSVV--YGLLAKH-RVREAYQIVDRIGV-MDISVYHGLIKGLLKLR--RAGEATQ 256
D T +++ YG + Y + R G ++ Y+ L+ L + R+GE
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE--N 547
Query: 257 VFREMIKRGCEPTMHTYIMLLQGH 280
V +M +G +PT +Y ++LQ +
Sbjct: 548 VISDMKSKGFKPTETSYSLMLQCY 571
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 127/321 (39%), Gaps = 42/321 (13%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVE-VFHLMNSNG 59
+L ++GK + ++L D+ + +R + L G + + K V VF M S G
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486
Query: 60 YGYNLETLNKVVDAM--CGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEA 117
+ + +T N ++ A CG + V+ +K + Y L+ KGD
Sbjct: 487 FEPDRDTFNTLISAYGRCGSE-VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 118 SKIWNLMADEGFEPD-------------------VEAVEK------------MMETLFKV 146
+ + M +GF+P +E +E ++ TL
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLA 605
Query: 147 NQGGEALKLFE---TMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
N AL E T+ K + + + ++ M QA+ + E +RE G+ D
Sbjct: 606 NFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPD 665
Query: 204 NLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFR 259
+T S++ + + +A +I+ + D+ Y+ +IKG + EA ++
Sbjct: 666 LVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLS 725
Query: 260 EMIKRGCEPTMHTYIMLLQGH 280
EM +RG P + TY + G+
Sbjct: 726 EMTERGIRPCIFTYNTFVSGY 746
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 91 KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGG 150
K KPD V + ++ F +A I + ++G PD+ +M+ + +
Sbjct: 624 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECW 683
Query: 151 EALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSV 210
+A ++ +T+ ++ L +Y VIK C +G+M +A ++ EM ERGI+ T +
Sbjct: 684 KAEEILKTLEKSQLKP-DLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTF 742
Query: 211 VYGLLAKHRVREAYQIVDRIGVMD 234
V G A E +++ + D
Sbjct: 743 VSGYTAMGMFAEIEDVIECMAKND 766
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 144/345 (41%), Gaps = 37/345 (10%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T+ L LG + +++ M SNG N T N ++ A+CG K ++ K+V
Sbjct: 423 TYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMD--KFVNRVF 479
Query: 91 KEW----VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKV 146
+E +PD + LI + G ++ASK++ M GF V ++ L +
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Query: 147 NQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLT 206
+ M+ K S Y L+++ G +++ ++E I +
Sbjct: 540 GDWRSGENVISDMKSKGFKPTETS-YSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWML 598
Query: 207 LGSVVYGLLAKHRVRE------AYQIVDRIGV-MDISVYHGLIKGLLKLRRAGEATQVFR 259
L ++ LLA + R A+ + + G D+ +++ ++ + +A +
Sbjct: 599 LRTL---LLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILE 655
Query: 260 EMIKRGCEPTMHTYIMLLQGHLGRRG-------------RKGTDP-LVNFDTIFVGGLVK 305
+ + G P + TY L+ ++ RRG + P LV+++T+ + G +
Sbjct: 656 SIREDGLSPDLVTYNSLMDMYV-RRGECWKAEEILKTLEKSQLKPDLVSYNTV-IKGFCR 713
Query: 306 VGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFEEM 350
G +E ++ + + RG+ F YN F+ ++ + MF E+
Sbjct: 714 RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYT---AMGMFAEI 755
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 30 RTFVIA---LRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYV 86
RT ++A R L G+ F L +GY ++ N ++ + ++A+ +
Sbjct: 600 RTLLLANFKCRALAGSER------AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGI 653
Query: 87 VLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFK 145
+ ++E + PD V Y L+ + +G+ +A +I + +PD+ + +++ +
Sbjct: 654 LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713
Query: 146 VNQGGEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQ 201
EA+++ L M E G+ TY + GM ++ + V E M + +
Sbjct: 714 RGLMQEAVRM-----LSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCR 768
Query: 202 IDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMD 234
+ LT VV G + EA V +I D
Sbjct: 769 PNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFD 801
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 98/250 (39%), Gaps = 55/250 (22%)
Query: 96 PDGVCYKHLIRGFCDKGDLIE--ASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
PD + + LI G L A ++ +++ + G PD ++ + + A+
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAV 317
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
K+FE M R + L TY +I G+ ++A+++F E+ +G D +T S++Y
Sbjct: 318 KVFEDMEAHRC-QPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYA 376
Query: 214 LLAK---HRVREAYQIVDRIGV-------------------------------------M 233
+ +V+E YQ + ++G
Sbjct: 377 FARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNP 436
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH--LGRRG------ 285
D Y LI L K R EA + EM+ G +PT+ TY L+ G+ G+R
Sbjct: 437 DAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Query: 286 ----RKGTDP 291
R GT P
Sbjct: 497 SCMLRSGTKP 506
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 103/224 (45%), Gaps = 14/224 (6%)
Query: 51 VFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFC 109
+F+ M +G +E++N ++ A+C +EE VV +L++ K ++ F
Sbjct: 809 IFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFA 868
Query: 110 DKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELG- 168
G++ E KI++ M G+ P + M+E L K G+ ++ E M + M+E
Sbjct: 869 RAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCK----GKRVRDAEIM-VSEMEEANF 923
Query: 169 ---LSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQ 225
L+ + ++K + +V++ ++E G++ D T +++ R E Y
Sbjct: 924 KVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYL 983
Query: 226 IVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
++ ++ + + Y LI K + +A Q+F E++ +G
Sbjct: 984 LMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKG 1027
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 132/303 (43%), Gaps = 29/303 (9%)
Query: 52 FHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVK-PDGVCYKHLIRGFCD 110
FH S Y +++A KL ++A+ VV L++ + PD + L+ +
Sbjct: 747 FHFACSPMY-------TDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQ 799
Query: 111 KGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMD-ELGL 169
G A I+N M +G P VE++ ++ L + E + E L+ M ++
Sbjct: 800 CGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVE--ELQDMGFKISK 857
Query: 170 STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAK-HRVREAYQIVD 228
S+ L++ G + + +K++ M+ G + + L ++ LL K RVR+A +V
Sbjct: 858 SSILLMLDAFARAGNIFEVKKIYSSMKAAGY-LPTIRLYRMMIELLCKGKRVRDAEIMVS 916
Query: 229 RIGVMDISVYHGLIKGLLKLRRAGE----ATQVFREMIKRGCEPTMHTYIMLL------- 277
+ + V + +LK+ A E QV++ + + G EP TY L+
Sbjct: 917 EMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDR 976
Query: 278 ---QGHLGRRGRK--GTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYN 332
+G+L + + G DP ++ + K + + E ++++GL++ R Y+
Sbjct: 977 RPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYH 1036
Query: 333 KFL 335
+
Sbjct: 1037 TMM 1039
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 126/280 (45%), Gaps = 27/280 (9%)
Query: 27 ATDRTFVIALRTLGGARELKKCVEVFHLMNSNG---YGYNLETLNKVVDAMCGYKLVEEA 83
T T+ ++ G A + ++ E+ LM G G N+ T N +V A C K VEEA
Sbjct: 148 PTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEA 207
Query: 84 KYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLI--EASKIWNLMADEGFEPDVEAVEKMM 140
VV K++E V+PD V Y + + KG+ + E+ + ++ E +P+ ++
Sbjct: 208 WEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVV 267
Query: 141 ETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRER-G 199
+ + + L+ ++RM E+ + +V + N F E+ +R G
Sbjct: 268 GGYCREGRVRDGLRF-----VRRMKEMRVEANLVVFNSLING---------FVEVMDRDG 313
Query: 200 IQIDNLTLGSVVYG----LLAKHRVR-EAYQIVDRIGV-MDISVYHGLIKGLLKLRRAGE 253
I LTL + + L+ +++ + ++ V D+ Y ++ +
Sbjct: 314 IDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEK 373
Query: 254 ATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLV 293
A QVF+EM+K G +P H Y +L +G++ + K + L+
Sbjct: 374 AAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL 413
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 116/258 (44%), Gaps = 23/258 (8%)
Query: 6 GKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLE 65
G+ ++ L++ R T ++A T+ ++ + + +G +
Sbjct: 59 GRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTV--QKQYGSISSIVSEVEQSGTKLDSI 116
Query: 66 TLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLM 124
N V++A +E+A +LK+KE + P Y LI+G+ G +S++ +LM
Sbjct: 117 FFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLM 176
Query: 125 ADEG---FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLS----TYRLVIK 177
+EG P++ +++ K + EA ++ +K+M+E G+ TY +
Sbjct: 177 LEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEV-----VKKMEECGVRPDTVTYNTIAT 231
Query: 178 WMCNKGMMSQAQKVFEE---MRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM- 233
KG +A+ E M+E+ + + T G VV G + RVR+ + V R+ M
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKA-KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMR 290
Query: 234 ---DISVYHGLIKGLLKL 248
++ V++ LI G +++
Sbjct: 291 VEANLVVFNSLINGFVEV 308
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 135/326 (41%), Gaps = 57/326 (17%)
Query: 50 EVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGF 108
+F+ + G+ +L T +V A+ K ++ K+ K +KPD + + +I
Sbjct: 340 SIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINAS 399
Query: 109 CDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELG 168
+ G+L +A KI+ M + G +P +++ K+ + E+ +L + M M +
Sbjct: 400 SESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPN 459
Query: 169 LSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTL--------------------- 207
T ++++ CN+ + +A + +M+ G++ D +T
Sbjct: 460 DRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMII 519
Query: 208 ---------------GSVVYGLLAKHRVREAYQIVDR---IGV-MDISVYHGLIKGLLKL 248
G++V G + ++ EA + R +GV ++ V++ LIKG L +
Sbjct: 520 PRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNI 579
Query: 249 RRAGEATQVFREMIKRGCEPTMHTYIMLLQG--HLGRRGR----------KGTDPLVNFD 296
+V M + G +P + T+ L+ +G R G DP ++
Sbjct: 580 NDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAF 639
Query: 297 TIFVGGLVKVGKAREYIKYVERVMNR 322
+I G + G+ + E+++N+
Sbjct: 640 SILAKGYARAGEPEK----AEQILNQ 661
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 122/291 (41%), Gaps = 39/291 (13%)
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
L+ G ++G EA I+N + +EG +P + ++ L + L L + +
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSL-----ISK 379
Query: 164 MDELGLST----YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHR 219
+++ GL + +I G + QA K+FE+M+E G + T +++ G +
Sbjct: 380 VEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGK 439
Query: 220 VREAYQIVD---RIGVMDIS--VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYI 274
+ E+ +++D R ++ + + L++ R+ EA + +M G +P + T+
Sbjct: 440 LEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFN 499
Query: 275 MLLQGH-------------LGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMN 321
L + + + R P V V G + GK E +++ R+
Sbjct: 500 TLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKE 559
Query: 322 RGLEVPRFDYNKFLHYFSNEEGVLMFEEMGKKLREVGLVDLADILERYGQK 372
G+ F +N + +G L +M G+ ++ D++E +G K
Sbjct: 560 LGVHPNLFVFNSLI------KGFLNINDMD------GVGEVVDLMEEFGVK 598
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/242 (17%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 44 ELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYK 102
++++ + F+ M G NL N ++ ++ VV ++E+ VKPD V +
Sbjct: 546 KMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFS 605
Query: 103 HLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLK 162
L+ + GD+ +I+ M + G +PD+ A
Sbjct: 606 TLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHA--------------------------- 638
Query: 163 RMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVRE 222
+ ++ K G +A+++ +MR+ G++ + + ++ G + +++
Sbjct: 639 ---------FSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKK 689
Query: 223 AYQIVDRI-GVM----DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLL 277
A Q+ ++ G++ +++ Y LI G + ++ +A ++ ++M + PT T ++
Sbjct: 690 AMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIA 749
Query: 278 QG 279
G
Sbjct: 750 DG 751
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 116/281 (41%), Gaps = 9/281 (3%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
M+ G S++ + EL + D+ T+ ++ L A K M G
Sbjct: 511 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETG 570
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEAS 118
Y + V+ + + A+ V ++ E+ ++PD V Y LI F D G++ +A
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETM--RLKRMDELGLSTYRLVI 176
M + G + +++ KV EA ++ + + + T +I
Sbjct: 631 SYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMI 690
Query: 177 KWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDI- 235
+ M+ +A+ +F+ M++RG + + T ++ R EA QI ++ M I
Sbjct: 691 NLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKIL 749
Query: 236 --SVYHGLIKGLLKLR-RAGEATQVFREMIKRGCEPTMHTY 273
+ + + GL L R EA + F+EM+ G +P T+
Sbjct: 750 TDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTF 790
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Query: 101 YKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR 160
Y +I + G + EAS+ + M +EG P M+ Q GE L +TM+
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK 360
Query: 161 LKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRV 220
L + TY ++I + +A F+EM++ G++ D ++ +++Y +H V
Sbjct: 361 LHCAPDT--RTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV 418
Query: 221 REA 223
EA
Sbjct: 419 EEA 421
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
Query: 117 ASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVI 176
A K+++ M + E V++ ++ + EA+K F+ + K L TY +I
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 177 KWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDIS 236
K +C KG M +FEE+ + G + D ++ +++ + E +I D + ++S
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 237 ----VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
Y+ ++GL + ++ +A + M G P +HTY L+ +
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAY 308
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 95/201 (47%), Gaps = 8/201 (3%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYV--VL 88
T+ ++ L + + +F + NG+ +L + N +++ +L E + ++
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 254
Query: 89 KLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKV-N 147
K K + P+ Y +RG +A + ++M EG PDV ++ T ++V N
Sbjct: 255 KSKN-LSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALI-TAYRVDN 312
Query: 148 QGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEE-MRERGIQIDNLT 206
E +K + M+ K + + TY ++I +C KG + +A +V EE ++ + + N+
Sbjct: 313 NLEEVMKCYNEMKEKGLTPDTV-TYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM- 370
Query: 207 LGSVVYGLLAKHRVREAYQIV 227
VV L+ ++ EA Q+V
Sbjct: 371 YKPVVERLMGAGKIDEATQLV 391
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 97/246 (39%), Gaps = 26/246 (10%)
Query: 129 FEPDVEAVEKMMETLFKVNQGGEALKLFETMRLK--RMDELGLSTYRLVIKWMCNKGMMS 186
F PD +M+ K + + ++ E MR + R TY V+ N G+M
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 187 QAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA----YQIVDRIGV-MDISVYHGL 241
+A++V EM G+ + +T ++ G + ++ A ++ + G+ D+ Y+ +
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 242 IKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLL-------QGHLGRR--GRKGTDPL 292
I G + + + A F EM RG PT +Y L+ Q L R DP
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 293 VNFDTI----FVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSNEEGVLMFE 348
V D I V G ++G + + V R+ G Y Y S GV
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF------YPNVATYGSLANGVSQAR 643
Query: 349 EMGKKL 354
+ G L
Sbjct: 644 KPGDAL 649
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 81/194 (41%), Gaps = 2/194 (1%)
Query: 23 RRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEE 82
R + T+ + A + + +V M G N T N ++ C ++
Sbjct: 446 RNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDR 505
Query: 83 AKYVVLKLKE--WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMM 140
A+ ++ ++ E ++PD V Y +I G D A +N M G P + +M
Sbjct: 506 AEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLM 565
Query: 141 ETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGI 200
+ Q A ++F+ M ++ L + ++++ C G++ AQ+V M+E G
Sbjct: 566 KAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF 625
Query: 201 QIDNLTLGSVVYGL 214
+ T GS+ G+
Sbjct: 626 YPNVATYGSLANGV 639
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/285 (19%), Positives = 111/285 (38%), Gaps = 54/285 (18%)
Query: 69 KVVDAMCGYKLVEEAKYVVLKLKEWV--KPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD 126
+DA C + ++ A +K + KP+ Y ++ G+ GD+ +A + + M
Sbjct: 162 SAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGK 221
Query: 127 EGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMS 186
E +PDV T+ ++I C
Sbjct: 222 ERAKPDV------------------------------------CTFNILINGYCRSSKFD 245
Query: 187 QAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVRE----AYQIVDRIGVMDISVYHGLI 242
A +F EM+E+G + + ++ +++ G L+ ++ E AY++++ + L+
Sbjct: 246 LALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILV 305
Query: 243 KGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG------------RKGTD 290
GL + R +A + +++ + P+ Y L++ G +KG
Sbjct: 306 DGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQT 365
Query: 291 PLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFL 335
P T V GL K G+ + ++E++MN G+ +N L
Sbjct: 366 PCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLL 410
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 114/263 (43%), Gaps = 21/263 (7%)
Query: 91 KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGG 150
KE KPD + LI G+C A ++ M ++G EP+V + ++ +
Sbjct: 221 KERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIE 280
Query: 151 EALKL-FETMRLK-RMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLG 208
E +K+ +E + L R E +T +++ +C +G + A + ++ + + G
Sbjct: 281 EGVKMAYEMIELGCRFSE---ATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 209 SVVYGLLAKHRVREAYQIVDRI---GVMDISVY-HGLIKGLLKLRRAGEATQVFREMIKR 264
S+V L +++ A ++++ + G + L++GL K R +A+ +M+
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 265 GCEPTMHTYIMLLQ-----GHLGRRGR-------KGTDPLVNFDTIFVGGLVKVGKAREY 312
G P T+ +LL+ H R KG +P + V G K G+ +E
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEG 457
Query: 313 IKYVERVMNRGLEVPRFDYNKFL 335
V ++++ + F YN+ +
Sbjct: 458 EVLVNEMLDKDMLPDIFTYNRLM 480
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 2/220 (0%)
Query: 47 KCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLI 105
+ + VF M +L T N ++D +V+EA + L++ ++P+ V Y ++
Sbjct: 313 EALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 372
Query: 106 RGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMD 165
R + + EA ++ LM + E +V M++ K + +A L + M+ + ++
Sbjct: 373 RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE 432
Query: 166 ELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQ 225
+ TY +I G + +A +F+++R G++ID + +++ + A +
Sbjct: 433 PNAI-TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKR 491
Query: 226 IVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRG 265
++ + + D I L K R EAT VFR+ + G
Sbjct: 492 LLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESG 531
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 105/250 (42%), Gaps = 37/250 (14%)
Query: 44 ELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYK 102
+ K + +F + +G +L N +++ KL EA+ ++ ++ E V P+ V Y
Sbjct: 240 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYS 299
Query: 103 HLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLK 162
L+ + + +EA ++ M + D+ M++ +++ EA +LF ++R
Sbjct: 300 TLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR-- 357
Query: 163 RMD-ELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVR 221
+MD E + +Y +++ + +A +F M+ + I+
Sbjct: 358 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIE-------------------- 397
Query: 222 EAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTY--IMLLQG 279
++ Y+ +IK K +AT + +EM RG EP TY I+ + G
Sbjct: 398 -----------QNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWG 446
Query: 280 HLGRRGRKGT 289
G+ R T
Sbjct: 447 KAGKLDRAAT 456
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 141/355 (39%), Gaps = 75/355 (21%)
Query: 61 GYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKI 120
GY L+ KVVDA+ L++E + + PD + Y L+ G G E +I
Sbjct: 432 GYCLQ--GKVVDAL---DLIDEM------IGNGMSPDLITYNVLVSGLARNGHEEEVLEI 480
Query: 121 WNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMD----------ELGLS 170
+ M EG +P+ ++E L + EA F ++ K + E GLS
Sbjct: 481 YERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLS 540
Query: 171 --TYRLVIKW---------------MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
Y+ ++ +C +G + +A V ++M ++ G ++
Sbjct: 541 KKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGA 600
Query: 214 LLAKHRVREAY----QIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPT 269
+ VREA +V+R + D+ Y +I +L +A +F +M +RG +P
Sbjct: 601 FCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPD 660
Query: 270 MHTYIMLL----------------QGHLGRRGRKGTDPLVNFD-----------TIFVGG 302
+ TY +LL QG +G+ RK ++ L F T+ +
Sbjct: 661 VVTYTVLLDRYLKLDPEHHETCSVQGEVGK--RKASEVLREFSAAGIGLDVVCYTVLIDR 718
Query: 303 LVKVGKAREYIKYVERVMNRGLEVPRFDYNKFL-HYFSN---EEGVLMFEEMGKK 353
K+ + + +R+++ GLE Y + YF + V + E+ KK
Sbjct: 719 QCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 128/308 (41%), Gaps = 34/308 (11%)
Query: 68 NKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD 126
N DA+ VEEA ++ ++K+ + PD + Y LI G+C +G +++A + + M
Sbjct: 392 NVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIG 451
Query: 127 EGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMS 186
G PD+ ++ L + E L+++E M+ + + T ++I+ +C +
Sbjct: 452 NGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAV-TNSVIIEGLCFARKVK 510
Query: 187 QAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV-MDISVYHGLIKGL 245
+A+ F + ++ + S V G ++AY+ R+ + SVY L L
Sbjct: 511 EAEDFFSSLEQKCPE----NKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSL 566
Query: 246 LKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVK 305
+A V ++M EP GR + +G K
Sbjct: 567 CIEGYLEKAHDVLKKMSAYRVEP----------------GRSMCGKM-------IGAFCK 603
Query: 306 VGKAREYIKYVERVMNRGLEVPRFDYNKFLHYFSN----EEGVLMFEEMGKKLREVGLVD 361
+ RE + ++ RGL F Y +H + ++ +FE+M ++ + +V
Sbjct: 604 LNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVT 663
Query: 362 LADILERY 369
+L+RY
Sbjct: 664 YTVLLDRY 671
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 120/267 (44%), Gaps = 14/267 (5%)
Query: 66 TLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLM 124
L VV C ++ A+ V+++++E D +I +C +L EA + M
Sbjct: 285 VLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKM 344
Query: 125 ADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGM 184
+G + + V +++ K++ EAL+ F+ R + L Y + + G
Sbjct: 345 LGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNI-FLDRVCYNVAFDALSKLGR 403
Query: 185 MSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDR-IG---VMDISVYHG 240
+ +A ++ +EM++RGI D + +++ G + +V +A ++D IG D+ Y+
Sbjct: 404 VEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNV 463
Query: 241 LIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG-HLGRRGRKGTDPLVNFD--- 296
L+ GL + E +++ M G +P T ++++G R+ ++ D + +
Sbjct: 464 LVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKC 523
Query: 297 ----TIFVGGLVKVGKAREYIKYVERV 319
FV G + G +++ K R+
Sbjct: 524 PENKASFVKGYCEAGLSKKAYKAFVRL 550
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 17/188 (9%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
V+PD VCY +++G D +A K+++ + G PDV + L K N AL
Sbjct: 282 VEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGAL 341
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
K+ +M K E + TY ++IK + G +S+A+ +++EM G+ ++ T ++
Sbjct: 342 KMMSSMN-KLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMI-- 398
Query: 214 LLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTY 273
AY VD ++ HGL++ + +++++ E+I R CE +
Sbjct: 399 --------SAYIEVD-----EVVCAHGLLEEAFNMNVFVKSSRI-EEVISRLCEKGLMDQ 444
Query: 274 IMLLQGHL 281
+ L HL
Sbjct: 445 AVELLAHL 452
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 20/166 (12%)
Query: 129 FEPDVEAVEKM-METLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK---------- 177
FE + ++M E+ K ++G L LK + E+G YR V+
Sbjct: 128 FEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNL-EIGERIYRFVVTEFEMSVRIGN 186
Query: 178 ----WMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM 233
C G + +A+ VF+ MR++ ++ S+V+G ++ R+ EA + +R V
Sbjct: 187 ALVDMFCKCGCLDKARAVFDSMRDKNVK----CWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
D+ ++ ++ G ++ R EA ++FR M G P + LL G
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTG 288
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 80/190 (42%), Gaps = 40/190 (21%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
+KPD V Y LI+ C+K L EA + + + ++G +PD+ ++
Sbjct: 176 IKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLL------------- 222
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
LS+Y KG ++++ +M E+ + ID T + + G
Sbjct: 223 ---------------LSSYL--------KGQFELGEEIWAKMVEKNVAIDIRTYNARLLG 259
Query: 214 LLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPT 269
L + + +E + + D+ ++ +I+G + + EA ++E++K G P
Sbjct: 260 LANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD 319
Query: 270 MHTYIMLLQG 279
T+ +LL
Sbjct: 320 KATFALLLPA 329
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 11/240 (4%)
Query: 49 VEVFHL---MNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVK-PDGV-CYKH 103
+E FH + G G L ++ +CG+ + EA ++ L + P V YK
Sbjct: 183 LEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKS 242
Query: 104 LIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKR 163
L FC +G EA +++ M +G+ D +M+ K N A++L+ M ++R
Sbjct: 243 LFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRM-VER 301
Query: 164 MDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA 223
EL + +I GM+ + + +F +M ++G+Q + T ++ + V A
Sbjct: 302 SFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYA 361
Query: 224 YQI-VDRIGVMDIS----VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQ 278
++ V+ G DIS Y LI G K +A + M+ G P TY +LL+
Sbjct: 362 LRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLK 421
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 14/198 (7%)
Query: 96 PDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKL 155
P Y +I+ + + + + + N++ + F PDV+ ++ L K N A +
Sbjct: 510 PLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAI 569
Query: 156 FETMRLKRMDELGL----STYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVV 211
+ M+ELGL + Y +I + +G + +A++ F +M E GIQ D + ++
Sbjct: 570 IDA-----MEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMI 624
Query: 212 YGLLAKHRVREAYQIVDRIGVMDIS----VYHGLIKGLLKLRRAGEATQVFREMIKRGCE 267
R+ EA ++V+ + + Y LI G +K+ + Q +M++ G
Sbjct: 625 NTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLS 684
Query: 268 PTMHTYIMLLQGHLGRRG 285
P + Y L+ GH ++G
Sbjct: 685 PNVVLYTALI-GHFLKKG 701
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 124/306 (40%), Gaps = 37/306 (12%)
Query: 65 ETLNKVVDAMCGYKLVEEAKYVV-LKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNL 123
E + +V+D G + EA V + ++ D CY LIR + G A +N
Sbjct: 64 EVIRRVID---GSSSISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQ 120
Query: 124 -MADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYR----LVIKW 178
+ G PD ++ M+ L K+ + EA L R+ G + R LV+
Sbjct: 121 RVIGNGIVPDSSVLDSMVFCLVKLRRFDEA-----RAHLDRIIASGYAPSRNSSSLVVDE 175
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM----- 233
+CN+ +A FE+++ERG + + GL + EA ++D + M
Sbjct: 176 LCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPL 235
Query: 234 DISVYHGLIKGLLKLRRAGEATQVFREM---------------IKRGCEPTMHTYIMLLQ 278
+++Y L K A EA +F M +K C+ T M L
Sbjct: 236 PVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLY 295
Query: 279 GHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYF 338
+ R + DP + F+T+ + G +K+G + +++ +G++ F Y+ + +
Sbjct: 296 LRMVERSFE-LDPCI-FNTL-IHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSY 352
Query: 339 SNEEGV 344
E V
Sbjct: 353 CKEGNV 358
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 54/236 (22%)
Query: 57 SNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGV---CYKHLIRGFCDKGD 113
++GY + + + VVD +C EA + ++KE + G+ C K L +G C G
Sbjct: 159 ASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKE--RGSGLWLWCCKRLFKGLCGHGH 216
Query: 114 LIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYR 173
L EA M++TL + RM L ++ Y+
Sbjct: 217 LNEAIG-------------------MLDTLCG---------------MTRM-PLPVNLYK 241
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA---------Y 224
+ C +G ++A+ +F+ M G +D V+Y L K ++
Sbjct: 242 SLFYCFCKRGCAAEAEALFDHMEVDGYYVDK-----VMYTCLMKEYCKDNNMTMAMRLYL 296
Query: 225 QIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH 280
++V+R +D +++ LI G +KL + +F +MIK+G + + TY +++ +
Sbjct: 297 RMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSY 352
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Query: 97 DGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLF 156
D V Y LI GD+ A ++W M D G EP V + M+ LF + EA +++
Sbjct: 156 DTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVY 215
Query: 157 ETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLA 216
+ M R+ TY ++++++ G +A +F +M+E G+Q D ++ L
Sbjct: 216 KEMLRSRVSP-NCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALK 274
Query: 217 KHRVREAYQIVDRIGVMDISV-YHGLIKGLLKLRRAGEATQVFREM 261
+++ + + + Y ++ L L+ AGE+ + RE+
Sbjct: 275 FGETSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGESDDLLREV 320
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 136/295 (46%), Gaps = 33/295 (11%)
Query: 49 VEVFHLMNSNGYG---------YNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGV 99
V + LM S+ Y NL + N ++ A L+ E + KL + DGV
Sbjct: 48 VHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPD---RDGV 104
Query: 100 CYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETM 159
+ LI G+ G + A K +N M + F ++ V M T+ K++ + L + +
Sbjct: 105 TWNVLIEGYSLSGLVGAAVKAYNTMMRD-FSANLTRVTLM--TMLKLSSSNGHVSLGKQI 161
Query: 160 RLKRMDELGLSTYRLV----IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLL 215
++ +LG +Y LV + N G +S A+KVF + +R + N +G GLL
Sbjct: 162 H-GQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMG----GLL 216
Query: 216 AKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIM 275
A + +A Q+ + +S + +IKGL + A EA + FREM +G + + +
Sbjct: 217 ACGMIEDALQLFRGMEKDSVS-WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGS 275
Query: 276 LLQ--GHLG--RRGRKGTDPLV--NF-DTIFVG-GLVKVGKAREYIKYVERVMNR 322
+L G LG G++ ++ NF D I+VG L+ + + + Y + V +R
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 41/197 (20%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
+ P+ + L FC+ + E M +EGFEPD
Sbjct: 232 IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPD--------------------- 270
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
L TY ++ C +G + +A +++ M R + D +T S++ G
Sbjct: 271 ---------------LVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKG 315
Query: 214 LLAKHRVREAYQ----IVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPT 269
L RVREA+Q +VDR D Y+ LI K ++ ++ EM+ P
Sbjct: 316 LCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPD 375
Query: 270 MHTYIMLLQGHLGRRGR 286
T ++++G + R GR
Sbjct: 376 RFTCKVIVEGFV-REGR 391
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 111/266 (41%), Gaps = 45/266 (16%)
Query: 23 RRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVE 81
RRR D T+ ++ L +++ + FH M G + + N ++ A C +++
Sbjct: 299 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQ 358
Query: 82 EAKYVVLK-LKEWVKPDGVCYKHLIRGF-------------------------------- 108
++K ++ + L V PD K ++ GF
Sbjct: 359 QSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLI 418
Query: 109 ---CDKGDLIEASKIWN-LMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRM 164
C +G A + + ++ +EG E E ++E+L + + EAL L +LK
Sbjct: 419 VSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVL--KGKLKNQ 476
Query: 165 DE-LGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA 223
++ L TYR +I +C G +A+ + EM + ++ D+ G++VYG + +A
Sbjct: 477 NQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKA 536
Query: 224 YQIVDRIG----VMDISVYHGLIKGL 245
+++ + D Y+ L+K +
Sbjct: 537 ERLLSLFAMEFRIFDPESYNSLVKAV 562
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 9/265 (3%)
Query: 26 FATDRTFVIALRTLGGARELKKCVEVFHLM--NSNGYG-YNLETLNKVVDAMCGYKLVEE 82
+D +V+ L R+ +F M +S+ +G + N+V+ + + +E
Sbjct: 202 LPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEV 261
Query: 83 AKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMME 141
A K +E K D Y +L+ F +KG +A +I+ M D E ++
Sbjct: 262 AFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIP 321
Query: 142 TLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQ 201
+L K + A KLF+ M+ +++ S + ++ M G + + KV+ EM+ G +
Sbjct: 322 SLAKSGRLDAAFKLFQQMKERKLRP-SFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHR 380
Query: 202 IDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQV 257
S++ ++ A ++ D + + +Y +I+ K + A V
Sbjct: 381 PSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTV 440
Query: 258 FREMIKRGCEPTMHTYIMLLQGHLG 282
F++M K G PT TY LL+ H G
Sbjct: 441 FKDMEKAGFLPTPSTYSCLLEMHAG 465
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
Query: 63 NLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKIW 121
NL T N +V+ C EEA V ++ ++ PD + + +L+ CD L EA K++
Sbjct: 349 NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLY 408
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCN 181
M ++ +PD +M+T FK + E ++TM + L+ Y + +
Sbjct: 409 GEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNL-RPNLAVYNRLQDQLIK 467
Query: 182 KGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI 230
G + A+ F+ M + +++D+ ++ L R+ E +IVD +
Sbjct: 468 AGKLDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEM 515
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 76/190 (40%), Gaps = 40/190 (21%)
Query: 94 VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEAL 153
++PD Y LI+G C KG EA + + + ++G +PD
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPD--------------------- 211
Query: 154 KLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYG 213
T+ +++ KG + ++++ M E+ ++ D + + + G
Sbjct: 212 ---------------HITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLG 256
Query: 214 LLAKHRVREAYQIVDRIG----VMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPT 269
L +++ E + D++ D+ + +IKG + + EA ++E+ K GC P
Sbjct: 257 LAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPL 316
Query: 270 MHTYIMLLQG 279
+ LL
Sbjct: 317 KFVFNSLLPA 326
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 63 NLETLNKVVDAMCGYKLVEEAKYVVLKLK-EWVKPDGVCYKHLIRGFCDKGDLIEASKIW 121
++ + N ++ +CG EA ++ +++ + +KPD + + L+ KG E +IW
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 122 NLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCN 181
M ++ + D+ + + L N+ E + LF+ ++ + + T+ +IK +
Sbjct: 236 ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKP-DVFTFTAMIKGFVS 294
Query: 182 KGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG----VMDISV 237
+G + +A ++E+ + G + S++ + + AY++ I ++D +V
Sbjct: 295 EGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAV 354
Query: 238 YHGLIKGLLKLRRAGEATQV 257
++ L+K + EA ++
Sbjct: 355 LQEVVDALVKGSKQDEAEEI 374
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 92/196 (46%), Gaps = 15/196 (7%)
Query: 70 VVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
++ +C + EA+ + L E D V + H+I G+ GD+ EA ++++ +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPE---RDVVTWTHVITGYIKLGDMREARELFDRVDS--- 105
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQ 189
+V M+ + Q A LF+ M E + ++ +I G + +A
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSIAEMLFQ-----EMPERNVVSWNTMIDGYAQSGRIDKAL 160
Query: 190 KVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLR 249
++F+EM ER I ++ S+V L+ + R+ EA + +R+ D+ + ++ GL K
Sbjct: 161 ELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNG 216
Query: 250 RAGEATQVFREMIKRG 265
+ EA ++F M +R
Sbjct: 217 KVDEARRLFDCMPERN 232
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 121/293 (41%), Gaps = 46/293 (15%)
Query: 31 TFVIAL-RTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK 89
TF+ L R+ G A +++F M+ G + + N ++ A L E + +
Sbjct: 103 TFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDE 162
Query: 90 LKEW---VKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFK- 145
+ + PD + Y LI+ +CD G +A +I M +G E + A ++ +L+K
Sbjct: 163 FPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKN 222
Query: 146 -------------VNQGGEALKLFETMRL---------------KRMDELGLS----TYR 173
VN+G + +RL + M +GL +Y
Sbjct: 223 GLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYN 282
Query: 174 LVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM 233
++ C KGMMS+A+KV+E + Q + T ++++ L + + + ++
Sbjct: 283 YLMTAYCVKGMMSEAKKVYEGLE----QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIV 338
Query: 234 ----DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLG 282
D L +GL+K R +A V R ++K+ P + T L+ LG
Sbjct: 339 HKIPDFKTCKHLTEGLVKNNRMEDARGVAR-IVKKKFPPRLVTEWKKLEEKLG 390
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 104/238 (43%), Gaps = 20/238 (8%)
Query: 100 CYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETM 159
Y + R F + E K++ M D F+P ++ ++ L G L
Sbjct: 300 TYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYL----SGSPNPDLDLVF 355
Query: 160 RLKRMDE-----LGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGL 214
R+ R E L + Y + + + + G +A+++ + MR G + DN+T +V+GL
Sbjct: 356 RVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGL 415
Query: 215 LAKHRVREAYQIVDRIGVM----DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTM 270
R+ EA ++D++ DI + LI+G K +A F M+++G +
Sbjct: 416 CKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDS 475
Query: 271 HTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPR 328
+ +L+ G + +G +IF+ +VK + + + ++++ L++ +
Sbjct: 476 NLLDVLIDGFVIHNKFEGA-------SIFLMEMVKNANVKPWQSTYKLLIDKLLKIKK 526
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 127/295 (43%), Gaps = 18/295 (6%)
Query: 2 LDVVGKSRNIDLFWELLSDIARRRFATD-RTFVIALRTLGGARELKKCVEVFHLMNSNGY 60
L V+ + ++ FW ++ ++ + D T++ R +R + + V+++ M +
Sbjct: 270 LRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPF 329
Query: 61 GYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDG-----VCYKHLIRGFCDKGDLI 115
+++ + ++ + G + +V ++ + G Y + R G
Sbjct: 330 KPSIQDCSLLLRYLSGSPNPDLD--LVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFD 387
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLV 175
EA +I M + G+EPD +++ L K + EA + + M + + T+ ++
Sbjct: 388 EAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFP-DIKTWTIL 446
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAY----QIVDRIG 231
I+ C + +A F M E+G ID+ L ++ G + ++ A ++V
Sbjct: 447 IQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNAN 506
Query: 232 VMDI-SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG 285
V S Y LI LLK++++ EA + +M+K+ P Y G+L + G
Sbjct: 507 VKPWQSTYKLLIDKLLKIKKSEEALDLL-QMMKKQNYP---AYAEAFDGYLAKFG 557
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 8/235 (3%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
M+D G++ N+D+ L ++ D TF +R G + C+ ++ M + G
Sbjct: 251 MIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALG 310
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKL-KEWVKPDGVCYKHLIRGF--CDKGDLIE 116
NL N+++D+M K +AK + L P+ Y L+R + GD +
Sbjct: 311 VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGD--D 368
Query: 117 ASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMR-LKRMDELGLSTYRLV 175
A I+ M ++G V ++ EA ++F+ M+ + D + L+
Sbjct: 369 ALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLI 428
Query: 176 IKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI 230
+ C+ G +S+A+ +MRE G + L SV+ +V + + D++
Sbjct: 429 TVYACS-GRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQV 482
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 101/223 (45%), Gaps = 17/223 (7%)
Query: 81 EEAKYVVLKLKEWVKP--DGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEK 138
E A V+ L E +KP + + Y ++ F DL ++ K+++ M + G +PD
Sbjct: 156 ETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTT 215
Query: 139 MMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNK----GMMSQAQKVFEE 194
++ + A++ FE +M G + + M + G + A +++
Sbjct: 216 IISCARQNGVPKRAVEWFE-----KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDR 270
Query: 195 MRERGIQIDNLTLGSVV--YGLLAKHR-VREAYQIVDRIGV-MDISVYHGLIKGLLKLRR 250
R +ID +T +++ YG+ + Y+ + +GV ++ +Y+ LI + + +R
Sbjct: 271 ARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKR 330
Query: 251 AGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLV 293
+A +++++I G P TY L++ + R R G D L
Sbjct: 331 PWQAKIIYKDLITNGFTPNWSTYAALVRAY--GRARYGDDALA 371
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 50 EVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEW-VKPDGVCYKHLIRGF 108
+V +M+ G + T N ++ +C K EAK ++ + ++P+ V Y LI GF
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 109 CDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRL---KRMD 165
C + +L EA ++ +M G++PD E ++ L K GG+ FET + + M+
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCK---GGD----FETALILCRESME 350
Query: 166 ELGLSTYRLVIKWMCNKGMMSQAQ 189
+ + ++ V+KW+ N G+ S+++
Sbjct: 351 KNWVPSFS-VMKWLVN-GLASRSK 372
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 127/289 (43%), Gaps = 20/289 (6%)
Query: 5 VGKSRNIDLFWELLSDIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNL 64
V S+ +D F + D FA V A+ G A L + ++ F + +
Sbjct: 92 VAVSQLLDGFIQNQPDPKSESFA-----VRAIILYGRANMLDRSIQTFRNLEQYEIPRTV 146
Query: 65 ETLNKVVDAMCGYKLVEEAKYVVLKLKEW--VKPDGVCYKHLIRGFCDKGDLIEASKIWN 122
++LN ++ A K +EA V L++ + ++PD Y +IR C+ G + I
Sbjct: 147 KSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVA 206
Query: 123 LMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDE----LGLSTYRLVIKW 178
M + +P + M++ +K + E K+ ++ MDE +G++TY ++I+
Sbjct: 207 EMERKWIKPTAASFGLMIDGFYKEEKFDEVRKV-----MRMMDEFGVHVGVATYNIMIQC 261
Query: 179 MCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGV----MD 234
+C + ++A+ + + + ++ +++T +++G ++ + EA + + + D
Sbjct: 262 LCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPD 321
Query: 235 ISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGR 283
Y LI L K A + RE +++ P+ L+ G R
Sbjct: 322 SECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASR 370
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 105/250 (42%), Gaps = 10/250 (4%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
TF L+ ++ ++ + GY ++ +N ++++ Y + K L
Sbjct: 117 TFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINS---YAVTGNFKLAHLLF 173
Query: 91 KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGG 150
+PD V + +I+G+ G + A ++ MA E + + M+ + +
Sbjct: 174 DRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA----EKNAISWTTMISGYVQADMNK 229
Query: 151 EALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSV 210
EAL+LF M+ ++ +S + G + Q + + + + I++D++ LG V
Sbjct: 230 EALQLFHEMQNSDVEPDNVSLAN-ALSACAQLGALEQGKWIHSYLNKTRIRMDSV-LGCV 287
Query: 211 VYGLLAKH-RVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPT 269
+ + AK + EA ++ I + + LI G EA F EM K G +P
Sbjct: 288 LIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPN 347
Query: 270 MHTYIMLLQG 279
+ T+ +L
Sbjct: 348 VITFTAVLTA 357
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 19/199 (9%)
Query: 90 LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG 149
+++ KP+ V Y LI + L EA ++N M + G EPD +++ K
Sbjct: 386 VRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFL 445
Query: 150 GEALKLFETMRLKRMDELGLS----TYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL 205
A+ +++ RM E GLS TY ++I + G + A ++F EM +G NL
Sbjct: 446 DIAMDMYQ-----RMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGC-TPNL 499
Query: 206 TLGSVVYGLLAKHRVREA----YQIVDRIGVMDISVYHGLIKGLLKLRRAG---EATQVF 258
+++ L AK R E Y+ + G V + ++ +L G EA VF
Sbjct: 500 VTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLG--HCGFLEEAEGVF 557
Query: 259 REMIKRGCEPTMHTYIMLL 277
EM ++ P Y +L+
Sbjct: 558 AEMQRKNWVPDEPVYGLLV 576
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 108/257 (42%), Gaps = 6/257 (2%)
Query: 27 ATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYV 86
T TF + + T G A + VE F + Y + N ++ ++ G K + +V
Sbjct: 185 TTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWV 244
Query: 87 VLK-LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFK 145
+ L++ PD + Y ++ G ++ + M +GF PD+ ++ L
Sbjct: 245 YEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLAT 304
Query: 146 VNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNL 205
N+ AL L MR + E G+ + +I + G + + +E + G D +
Sbjct: 305 GNKPLAALNLLNHMREVGV-EPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 206 TLGSVVYGLLAKHRVREA----YQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREM 261
++ G ++ + +A ++ ++ + ++ Y+ +I+G + EA + +EM
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Query: 262 IKRGCEPTMHTYIMLLQ 278
RGC P Y L+
Sbjct: 424 ESRGCNPNFVVYSTLVN 440
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 3/190 (1%)
Query: 12 DLFWELLSDIARRRFATD-RTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKV 70
D + LL ++ + F+ D T+ I L L + + + + M G + +
Sbjct: 274 DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL 333
Query: 71 VDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
+D + +E KY + + +K PD VCY +I G+ G+L +A +++ M ++G
Sbjct: 334 IDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ 393
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQ 189
P+V M+ + EA L + M + + Y ++ + N G + +A
Sbjct: 394 LPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNP-NFVVYSTLVNNLKNAGKVLEAH 452
Query: 190 KVFEEMRERG 199
+V ++M E+G
Sbjct: 453 EVVKDMVEKG 462
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 94/220 (42%), Gaps = 17/220 (7%)
Query: 120 IWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWM 179
++ M ++GF PDV +M F++ + +L + M +K L TY +++ +
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEM-VKDGFSPDLYTYNILLHHL 302
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD---RIGVM-DI 235
A + MRE G++ + +++ GL ++ +D ++G D+
Sbjct: 303 ATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDV 362
Query: 236 SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGH------------LGR 283
Y +I G + +A ++F+EM ++G P + TY +++G L
Sbjct: 363 VCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKE 422
Query: 284 RGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRG 323
+G +P + V L GK E + V+ ++ +G
Sbjct: 423 MESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 121/274 (44%), Gaps = 14/274 (5%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
+L V+ + ++ LLSD+ + A D+ TF I TL + + + +F +++
Sbjct: 109 VLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFS 168
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVC-YKHLIRGFCDKGDLIEAS 118
+ T+ ++ A+C V+ A V+ K+ + + + Y+ L+ G+ + ++ EA
Sbjct: 169 CPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEAR 228
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQG-------GEALKLFETMRLKRMDELGLST 171
++ M G PD+ ++ L + N EAL + MR ++ +S
Sbjct: 229 RVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMS- 287
Query: 172 YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVD--- 228
Y +++ + + ++ ++ E+M+ G D + VV L R + QIVD
Sbjct: 288 YNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMI 347
Query: 229 -RIGVMDISVYHGLIKGLLKLRRAGEATQVFREM 261
R + Y+ LI L + R A Q+F +M
Sbjct: 348 ERGFRPERKFYYDLIGVLCGVERVNFALQLFEKM 381
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 131/329 (39%), Gaps = 55/329 (16%)
Query: 1 MLDVVGKSRNIDLF--WELLSDIARRRFATDRTFVIALRTL-------GGARELKKCVEV 51
++ + +R +D + W+L+ +I + + V+ L L G + K +V
Sbjct: 198 LVAIASDTRRMDAYGLWDLVKEIGEK----ESCGVLNLEILNELIALFGKLGKSKAAFDV 253
Query: 52 FHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCD 110
F G+ N +T ++A+C ++ A V K LK V +G ++I FC
Sbjct: 254 FSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCK 313
Query: 111 KGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQG-------------GEA----L 153
+G EA ++ L + V ++ L K N G GEA +
Sbjct: 314 EGKAEEAYSVYELAKTKEKSLPPRFVATLITALCK-NDGTITFAQEMLGDLSGEARRRGI 372
Query: 154 KLFETM--RLKRMDEL-----------------GLSTYRLVIKWMCNKGMMSQAQKVFEE 194
K F + L RM + G + + LV+ G + +A++V +
Sbjct: 373 KPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKL 432
Query: 195 MRERGIQIDNLTLGSVVYGLLAKHRVREAYQIV----DRIGVMDISVYHGLIKGLLKLRR 250
M RG++ D T ++ G + EA +I+ + + YH LI+G K+
Sbjct: 433 MESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEE 492
Query: 251 AGEATQVFREMIKRGCEPTMHTYIMLLQG 279
EA ++ EM + G +P Y L+Q
Sbjct: 493 YDEALKLLNEMDRFGVQPNADEYNKLIQS 521
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 131/320 (40%), Gaps = 36/320 (11%)
Query: 63 NLETLNKVVDAMCGYKLVEEAKYVVL-KLKEW-VKPDGVCYKHLIRGFCDKGDLIEASKI 120
NLE LN+++ A+ G +A + V K +E+ P+ Y + C + + A +
Sbjct: 230 NLEILNELI-ALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSV 288
Query: 121 WNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMC 180
M G + E + ++ K + EA ++E + K L+
Sbjct: 289 CEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCK 348
Query: 181 NKGMMSQAQKVFE----EMRERGIQIDNLTLGSVVYGLLAKHRVREA----YQIVDRIGV 232
N G ++ AQ++ E R RGI+ V++ L V++A ++ +
Sbjct: 349 NDGTITFAQEMLGDLSGEARRRGIK----PFSDVIHSLCRMRNVKDAKALLLDMISKGPA 404
Query: 233 MDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHL----------- 281
+V++ ++ K EA +V + M RG +P ++TY +++ G+
Sbjct: 405 PGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEI 464
Query: 282 ---GRRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHYF 338
++ K P+ + G K+ + E +K + + G++ +YNK + F
Sbjct: 465 LAEAKKKHKKLSPVTYH--ALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSF 522
Query: 339 -----SNEEGVLMFEEMGKK 353
E+ ++FEEM +K
Sbjct: 523 CLKALDWEKAEVLFEEMKQK 542
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 18/209 (8%)
Query: 10 NIDLFWELLSDI---ARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLET 66
I E+L D+ ARRR + F + +L R +K + M S G
Sbjct: 352 TITFAQEMLGDLSGEARRRGI--KPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAV 409
Query: 67 LNKVVDAMCGYKLVEEAKYVVLKLKEW--VKPDGVCYKHLIRGFCDKGDLIEASKIWNLM 124
N VV A ++EAK V LKL E +KPD Y +I G+ G + EA +I
Sbjct: 410 FNLVVHACSKTGDLDEAKEV-LKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEA 468
Query: 125 ADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLST----YRLVIKWMC 180
+ + ++ K+ + EALKL L MD G+ Y +I+ C
Sbjct: 469 KKKHKKLSPVTYHALIRGYCKIEEYDEALKL-----LNEMDRFGVQPNADEYNKLIQSFC 523
Query: 181 NKGM-MSQAQKVFEEMRERGIQIDNLTLG 208
K + +A+ +FEEM+++G+ ++ ++ G
Sbjct: 524 LKALDWEKAEVLFEEMKQKGLHLNAISQG 552
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 107 GFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDE 166
G C GD +++ I+ + E +P++ + +M + G LK+++ M++ +
Sbjct: 278 GLC--GDYVKSRYIYEDLLKENIKPNIYVINSLMNV--NSHDLGYTLKVYKNMQILDVTA 333
Query: 167 LGLSTYRLVIKWMCNKGMMSQAQKVFEE---MRERGI-QIDNLTLGSVVYGLLAKHRVRE 222
+++Y +++K C G + AQ +++E M G+ ++D T +++ +
Sbjct: 334 -DMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKW 392
Query: 223 AYQIVD---RIGVM-DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQ 278
A ++ D +GV + + LI +A +F EM+ GCEP + +LL
Sbjct: 393 ALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLH 452
Query: 279 G 279
Sbjct: 453 A 453
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 11/209 (5%)
Query: 76 GYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEA 135
GY E K + +GV + +I G+ GD+ A +++ LM+ + D
Sbjct: 241 GYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKK----DKLV 296
Query: 136 VEKMMETLFKVNQGGEALKLFETM----RLKRMDELGLSTYRLVIKWMCNKGMMSQAQKV 191
+ M+ + + +ALKLF M + DE+ LS+ V+ G S V
Sbjct: 297 YDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSS---VVSANSQLGNTSFGTWV 353
Query: 192 FEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRA 251
+ E GI+ID+L S++ + +A+++ + D Y +I G A
Sbjct: 354 ESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMA 413
Query: 252 GEATQVFREMIKRGCEPTMHTYIMLLQGH 280
EA +F MI++ P + T+ LL +
Sbjct: 414 TEANSLFTAMIEKKIPPNVVTFTGLLSAY 442
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 140/347 (40%), Gaps = 27/347 (7%)
Query: 1 MLDVVGKSRNIDLFWELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNG 59
++D+ GK+ ++ L S++ + D TF + T G L + + M G
Sbjct: 311 LIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKG 370
Query: 60 YGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEAS 118
+ +T N ++ +E A K+++ + PD V ++ ++ C + + E
Sbjct: 371 ISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVE 430
Query: 119 KIWNLMADEGFEPDVEAVEKMMETLFKVNQG--GEALKLFETMRLKRMDELGLSTYRLVI 176
+ M D +V +M+ VN+G +A LFE +L + L +T VI
Sbjct: 431 AVIAEMDRNSIRIDEHSVPVIMQ--MYVNEGLVVQAKALFERFQLDCV--LSSTTLAAVI 486
Query: 177 KWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA----YQIVDRIGV 232
KG+ +A+ VF R Q +++ +V+ K ++ E ++ + G
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 233 M-DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG------ 285
D Y+ L + L + EA ++ EM+ GC+P TY ++ ++ R G
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYV-RLGLLSDAV 605
Query: 286 -------RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLE 325
+ G P + G + G E I+Y + G++
Sbjct: 606 DLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQ 652
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 121/274 (44%), Gaps = 48/274 (17%)
Query: 32 FVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAK------- 84
+ + ++ G A+ +K + +F M + G + T N + + G LV+EA+
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 85 -----------------YVVLKL------------KEWVKPDGVCYKHLIRGFCDKGDLI 115
YV L L K VKP+ V Y LI GF + G +
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVE 637
Query: 116 EASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELG---LSTY 172
EA + + +M + G + + + +++ KV EA ++++ M+ D G ++
Sbjct: 638 EAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMK----DSEGGPDVAAS 693
Query: 173 RLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRI-- 230
++ + G++S+A+ +F +RE+G D ++ +++Y + EA ++ + +
Sbjct: 694 NSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRE 752
Query: 231 -GVM-DISVYHGLIKGLLKLRRAGEATQVFREMI 262
G++ D + ++ ++ + E ++F EM+
Sbjct: 753 SGLLSDCTSFNQVMACYAADGQLSECCELFHEML 786
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 117/296 (39%), Gaps = 41/296 (13%)
Query: 36 LRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE--- 92
+R+ G A + F M+ G + + N +++A K ++ + ++ +
Sbjct: 109 IRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYN 168
Query: 93 WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFK------- 145
+ PD + Y LI+ +CD G +A +I M +G E A ++ +L+K
Sbjct: 169 KIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVA 228
Query: 146 -------VNQGGEALKLFETMR---------------LKRMDELGLS----TYRLVIKWM 179
V +G E +R ++ M +GL +Y ++
Sbjct: 229 DNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAY 288
Query: 180 CNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM----DI 235
C +GM+ +A+KV+E + + T ++++ L + Y I + M D
Sbjct: 289 CERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDF 348
Query: 236 SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDP 291
+ L+ GL++ ++ +A + R +K+ P+ L+ LG + P
Sbjct: 349 NTLKHLVVGLVENKKRDDAKGLIR-TVKKKFPPSFLNAWKKLEEELGLYSKTDAFP 403
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 107/250 (42%), Gaps = 24/250 (9%)
Query: 36 LRTLGGARELKKCVEVF-HLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKEWV 94
LR L G + E+ HL+ +G NL + + ++CG + + Y
Sbjct: 8 LRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFI--SICGS--LSNSDYANRVFSHIQ 63
Query: 95 KPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEG-------FEPDVEAVEKMMETLFKVN 147
P+ + + +I+ + G +E+ ++ M G + P +++ + + F
Sbjct: 64 NPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKC 123
Query: 148 QGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTL 207
GE ++ R+ ++ + V++ + G M AQKVF+EM ER + + NL
Sbjct: 124 VHGELIR----TGFHRLGKIRIG----VVELYTSGGRMGDAQKVFDEMSERNVVVWNL-- 173
Query: 208 GSVVYGLLAKHRVREAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFREMIKRGCE 267
++ G V + ++ I ++ +I L K R EA ++F EMI +G +
Sbjct: 174 --MIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFD 231
Query: 268 PTMHTYIMLL 277
P T + +L
Sbjct: 232 PDEATVVTVL 241
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 108/234 (46%), Gaps = 34/234 (14%)
Query: 139 MMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRER 198
M++ L K N+ E + E M+ + E S + VI+ G + A +F+ + E
Sbjct: 52 MIDILGKSNRVLEMKYVIERMK-EDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEF 110
Query: 199 GIQIDNLTLGSVVYGLLAKHRVREA----------YQIVDRIGVMDISVYHGLIKGLLKL 248
+L+ +++ ++ + + A +++ RI +++ L+K L ++
Sbjct: 111 NCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNL-----LMKVLCQV 165
Query: 249 RRAGEATQVFREMIKRGCEPTMHTYIMLLQG-----------HL-----GRRGRKGTDPL 292
R+ A+QVF+EM +GC P +Y +L++G HL R +KG+
Sbjct: 166 NRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGED 225
Query: 293 VNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFL--HYFSNEEGV 344
+ I + L G+ + I+ + +++ +GL+ P+ Y+ H+ S+ EG+
Sbjct: 226 IVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGI 279
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 116/274 (42%), Gaps = 47/274 (17%)
Query: 51 VFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKH------ 103
+F ++ G G ++ ++DA+C V++A ++ K L++ +K CY H
Sbjct: 213 MFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHW 272
Query: 104 -----------------LIRG--------------FCDKGDLIEASKIWNLMADEGFEPD 132
LIRG ++G L+E ++ M +GFEP
Sbjct: 273 ESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPT 332
Query: 133 VEAVEKMMETLFKVNQGGEALKLF--ETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQK 190
++ L + + EA+ + E M+ + +G+ Y ++IK +C+ G +A
Sbjct: 333 PFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGV--YNVLIKGLCDDGKSMEAVG 390
Query: 191 VFEEMRERGIQIDNL-TLGSVVYGLLAKHRVREAYQIVDRIGVMD----ISVYHGLIKGL 245
++M ++ + N T ++V GL + EA Q+++ + + + YH +IKGL
Sbjct: 391 YLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
Query: 246 LKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
+ R EA EM+ + P + L +
Sbjct: 451 CDMDRRYEAVMWLEEMVSQDMVPESSVWKALAES 484
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 108/234 (46%), Gaps = 34/234 (14%)
Query: 139 MMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRER 198
M++ L K N+ E + E M+ + E S + VI+ G + A +F+ + E
Sbjct: 52 MIDILGKSNRVLEMKYVIERMK-EDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEF 110
Query: 199 GIQIDNLTLGSVVYGLLAKHRVREA----------YQIVDRIGVMDISVYHGLIKGLLKL 248
+L+ +++ ++ + + A +++ RI +++ L+K L ++
Sbjct: 111 NCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNL-----LMKVLCQV 165
Query: 249 RRAGEATQVFREMIKRGCEPTMHTYIMLLQG-----------HL-----GRRGRKGTDPL 292
R+ A+QVF+EM +GC P +Y +L++G HL R +KG+
Sbjct: 166 NRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGED 225
Query: 293 VNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFL--HYFSNEEGV 344
+ I + L G+ + I+ + +++ +GL+ P+ Y+ H+ S+ EG+
Sbjct: 226 IVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGI 279
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 116/274 (42%), Gaps = 47/274 (17%)
Query: 51 VFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKH------ 103
+F ++ G G ++ ++DA+C V++A ++ K L++ +K CY H
Sbjct: 213 MFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHW 272
Query: 104 -----------------LIRG--------------FCDKGDLIEASKIWNLMADEGFEPD 132
LIRG ++G L+E ++ M +GFEP
Sbjct: 273 ESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPT 332
Query: 133 VEAVEKMMETLFKVNQGGEALKLF--ETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQK 190
++ L + + EA+ + E M+ + +G+ Y ++IK +C+ G +A
Sbjct: 333 PFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGV--YNVLIKGLCDDGKSMEAVG 390
Query: 191 VFEEMRERGIQIDNL-TLGSVVYGLLAKHRVREAYQIVDRIGVMD----ISVYHGLIKGL 245
++M ++ + N T ++V GL + EA Q+++ + + + YH +IKGL
Sbjct: 391 YLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
Query: 246 LKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQG 279
+ R EA EM+ + P + L +
Sbjct: 451 CDMDRRYEAVMWLEEMVSQDMVPESSVWKALAES 484
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 150/363 (41%), Gaps = 50/363 (13%)
Query: 20 DIARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKL 79
DI RFA +++ L+ + + E F ++ G + + N +++ L
Sbjct: 463 DIPLSRFA----YIVMLQCYAKIQNVDCAEEAFRALSKTGLP-DASSCNDMLNLYTRLNL 517
Query: 80 VEEAK-YVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEK 138
E+AK ++ + + V D YK +R +C +G + EA + M E D V+
Sbjct: 518 GEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQT 577
Query: 139 MMETLFKVNQGGE-------------ALKLFETMRLKRMD--------------ELGLST 171
+ E++ VN+ + AL L +RLK + +LG S
Sbjct: 578 LAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSA 637
Query: 172 YRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIG 231
VI +G +S+A+ + + + G++++ T+ +++ +H+++EA ++ G
Sbjct: 638 VNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAG 697
Query: 232 VMDI---SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG--- 285
SV +I ++ +A +F E ++GC+P T I +L L RG
Sbjct: 698 ESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVT-ISILVNALTNRGKHR 756
Query: 286 ------RKGTDPLVNFDTI----FVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFL 335
R + + DT+ + +++ GK + + ER+ G+ YN +
Sbjct: 757 EAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMI 816
Query: 336 HYF 338
+
Sbjct: 817 SVY 819
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 123/287 (42%), Gaps = 30/287 (10%)
Query: 66 TLNKVVDAMCGYKLVEEAKYVVLK-LKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLM 124
T++ +V+A+ EA+++ L++ ++ D V Y LI+ + G L AS+I+ M
Sbjct: 741 TISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERM 800
Query: 125 ADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGM 184
G ++ M+ + Q +A+++F R + L Y +I G
Sbjct: 801 HTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGL-YLDEKIYTNMIMHYGKGGK 859
Query: 185 MSQAQKVFEEMRERGIQIDNLTLGSVVYGLLAK--------HRVREAYQIVDRIG-VMDI 235
MS+A +F EM+++GI+ G+ Y ++ K H V E Q ++R G D+
Sbjct: 860 MSEALSLFSEMQKKGIKP-----GTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDL 914
Query: 236 SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRG---------- 285
S Y LI+ + + EA + + ++G P H++ L L + G
Sbjct: 915 STYLTLIQVYAESSQFAEAEKTITLVKEKGI-PLSHSHFSSLLSALVKAGMMEEAERTYC 973
Query: 286 ---RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRF 329
G P + G + G A + I + E+++ +E RF
Sbjct: 974 KMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRF 1020
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 13 LFWELLSD-IARRRFATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVV 71
L++++ D + RF TF L+ GG ++ + + G+GY++ LN +V
Sbjct: 182 LYFQMAEDGVKPDRF----TFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALV 237
Query: 72 --DAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGF 129
A CG + + ++ K++V + ++ G+ G L EA I+ LM G
Sbjct: 238 VMYAKCGDIVKARNVFDMIPHKDYVS-----WNSMLTGYLHHGLLHEALDIFRLMVQNGI 292
Query: 130 EPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQ 189
EPD A+ ++ + G + ++R E LS +I +G + QA
Sbjct: 293 EPDKVAISSVLARVLSFKHG----RQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQAC 348
Query: 190 KVFEEMRER 198
+F++M ER
Sbjct: 349 FIFDQMLER 357
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 143/362 (39%), Gaps = 27/362 (7%)
Query: 1 MLDVVGKSRNIDLFWELLSDIA-RRRFATDRTFVIALRTLGGARELKKCVEVFHLMNS-N 58
+ ++G+ R D LLS++ + F R + A+ L ++ EV+ M+ N
Sbjct: 244 LFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKIN 303
Query: 59 GYGYNLETLNKVVDAMCGYKLVEEAKYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEA 117
Y N+ + + +E + K+ E VK + L++ FCD+G EA
Sbjct: 304 VYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEA 363
Query: 118 SKIWNLMADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIK 177
I M +G + +M+ K N E LF MR K + + +TY +++
Sbjct: 364 LVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGL-KPSAATYNILMD 422
Query: 178 WMCNKGMMSQAQKVFEEMRERGIQ--IDNLTLGSVVYGLLAKHR--VREAYQIVDRIGVM 233
+ + + EM + G++ + + T YG K +A+ + ++G+
Sbjct: 423 AYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLK 482
Query: 234 DIS-VYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLL-----QGHLG----- 282
S Y LI +A F EM K G +P++ TY +L G G
Sbjct: 483 PSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEI 542
Query: 283 -----RRGRKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFLHY 337
R KGT + ++T+ + G K G E V GL+ YN ++
Sbjct: 543 WKLMLREKIKGTR--ITYNTL-LDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNA 599
Query: 338 FS 339
++
Sbjct: 600 YA 601
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 67 LNKVVDAMCGYKLVEEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMAD 126
+ +D +CG KL+ EA ++ + K KP Y +LI+ L E K+ +
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGRAK---KPPASTYCNLIQVCSQTRALEEGKKVHEHIRT 113
Query: 127 EGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMS 186
GF P + +++ K +A K+F+ M L ++ +++ G++
Sbjct: 114 SGFVPGIVIWNRLLRMYAKCGSLVDARKVFD-----EMPNRDLCSWNVMVNGYAEVGLLE 168
Query: 187 QAQKVFEEMRERGIQIDNLTLGSVVYGLLAKHRVREA---YQIVDRI 230
+A+K+F+EM E+ D+ + ++V G + K + EA Y ++ R+
Sbjct: 169 EARKLFDEMTEK----DSYSWTAMVTGYVKKDQPEEALVLYSLMQRV 211
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 133 VEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVF 192
V V + + L Q +AL++F+ +R + + TY ++ + G ++AQK+F
Sbjct: 88 VNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLF 147
Query: 193 EEMRERGIQIDNLTLGSVVYGLLAKHRVREAYQIVDRIGVM-----DISVYHGLIKGLLK 247
+EM E G++ +++ + + +A+ I+D++ D+ Y L+K +
Sbjct: 148 DEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVD 207
Query: 248 LRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGR 286
+ +++EM +R P T ++L G+ GR GR
Sbjct: 208 ASQFDLVDSLYKEMDERLITPNTVTQNIVLSGY-GRVGR 245
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 112/289 (38%), Gaps = 40/289 (13%)
Query: 31 TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYVVLKL 90
T + A+ + + + EV + G+ ++ N +VD +E+A+ V +
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 91 KEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFKVNQGG 150
K D + +I G+C G +A +++ M D P++ M+ K G
Sbjct: 414 K---NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEG 470
Query: 151 EALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQIDNLTLGSV 210
EA+ LF+ M + +T+ L+I G +A ++F +M+ +++T+ S+
Sbjct: 471 EAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSL 530
Query: 211 VYG---LLAKHRVREAYQIVDR--------------------------------IGVMDI 235
+ LL VRE + V R + DI
Sbjct: 531 LPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDI 590
Query: 236 SVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTY--IMLLQGHLG 282
++ LI G + G A +F +M +G P T I+L G +G
Sbjct: 591 ITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMG 639
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 14/217 (6%)
Query: 81 EEAKYVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMM 140
+EA+ + K+ D V + L+ G+ G + EA I+ M E ++ + M+
Sbjct: 337 DEARAIFEKMP---AKDLVSWNALLSGYVSSGHIGEAKLIFKEMK----EKNILSWMIMI 389
Query: 141 ETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGI 200
L + G E LKLF M+ + + + + IK G Q+ ++ + G
Sbjct: 390 SGLAENGFGEEGLKLFSCMKREGFEPCDYA-FSGAIKSCAVLGAYCNGQQYHAQLLKIGF 448
Query: 201 QIDNLTLGSVVYGLLAKHRV-REAYQIVDRIGVMDISVYHGLIKGLLKLRRAGEATQVFR 259
+L+ G+ + + AK V EA Q+ + +D ++ LI L + EA V+
Sbjct: 449 D-SSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYE 507
Query: 260 EMIKRGCEPTMHTYIMLLQG--HLG--RRGRKGTDPL 292
EM+K+G P T + +L H G +GRK D +
Sbjct: 508 EMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSM 544
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 16 ELLSDIARRRFATDR-TFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAM 74
EL ++++R + T+ ++ L A + E+F M S+G ++ T N ++D +
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 75 CGYKLVEEAK-----------YVVLKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNL 123
C +E+A + L LK VKP+ V Y +I GFC KG EA ++
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 124 MADEGFEPDVEAVEKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWM 179
M ++G PD ++ + + +L + MR R STY LV +
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAG-DASTYGLVTDML 175
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 115/251 (45%), Gaps = 21/251 (8%)
Query: 31 TFVIALRTLGGARE-------LKKCVEVFHLMNSNGYG---YNLETLNKVVDAMCGYKLV 80
++ IA+R LG A+ + + + V H+ N N Y + K++ A+ ++ +
Sbjct: 174 SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHM 233
Query: 81 EEAKYVVLKLKEWVKPDGVCYKHLI-RG---FCDKGDLIEASKIWNLMADEGFEPDVEAV 136
+K L+ + ++ + +K L+ RG + + + ++ M D G EPDV A+
Sbjct: 234 VTSKN--LECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFAL 291
Query: 137 EKMMETLFKVNQGGEALKLFETMRLKRMDELGLSTYRLVIKWMCNKGMMSQAQKVFEEMR 196
+++ +AL++F M + E TY +I +C +G A+++ EM+
Sbjct: 292 NCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMK 351
Query: 197 ERGIQIDNLTLGSVVYGLLAKHRVREA----YQIVDRIGVMDISVYHGLIKGLLKLRRAG 252
+G + + S+V + +A +++++ V+D Y L+ + +
Sbjct: 352 GKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYD 411
Query: 253 EATQVFREMIK 263
EAT++ EM++
Sbjct: 412 EATRLL-EMLR 421
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 146/338 (43%), Gaps = 51/338 (15%)
Query: 30 RTFVIALRTLGGARELKKCVEVFHLMN-----SNGY-GYNLETLNKVVDAMCGYKLVEEA 83
+ F ++ G + LK V V + S G G NL N ++ AM G+ EA
Sbjct: 147 QVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFG---EA 203
Query: 84 KYVVLKLKE-WVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMET 142
+ ++ ++E + P+ V Y L+ + ++G+ ++A I +L ++GFEP+ +
Sbjct: 204 EKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLV 263
Query: 143 LFKVNQGGEALKLFETMR--------------------LKRMDELGLSTYRLVIKWMC-N 181
++ G AL+ F +R +K + +G Y+++ +W+ +
Sbjct: 264 YRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKD 323
Query: 182 KGMMSQAQKVFEEMRERGIQIDNLTLGSVVYGLL-AKHRV--REAYQ-IVDRIGVMDISV 237
++ K+ M G++ +++ +H + +E Y+ I +R + +SV
Sbjct: 324 DNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSV 383
Query: 238 YHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDT 297
+ LI + K ++ A +++ +++ G EP +Y + +V+
Sbjct: 384 CNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYEL----------------VVSHFN 427
Query: 298 IFVGGLVKVGKAREYIKYVERVMNRGLEVPRFDYNKFL 335
I + K G R ++ + ++ ++GL+ R +N L
Sbjct: 428 ILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVL 465
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/368 (19%), Positives = 147/368 (39%), Gaps = 61/368 (16%)
Query: 27 ATDRTFVIALRTLGGARELKKCVEVFHLMNSNGYGYNLETLNKVVDAMCGYKLVEEAKYV 86
+T F + ++ R L+ +VF + G+ ++ TLN ++ K+ + +
Sbjct: 162 STPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRI 221
Query: 87 V-LKLKEWVKPDGVCYKHLIRGFCDKGDLIEASKIWNLMADEGFEPDVEAVEKMMETLFK 145
+ + + P+ + + +I+ C +G L E + + + + P V ++ + +
Sbjct: 222 YECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLE 281
Query: 146 VNQGGEALKLFETMRLKRM--DELGLSTYRLVIKWMCNKGMMSQAQKVFEEMRERGIQID 203
+ E++ L + + +K M D +G Y +V+ +G + A+KVF+EM +RG +
Sbjct: 282 EMRIEESMSLLKRLLMKNMVVDTIG---YSIVVYAKAKEGDLVSARKVFDEMLQRGFSAN 338
Query: 204 NLTLGSVVYGLLAKHRVREAYQIVDRI--------------------------------- 230
+ V K V+EA +++ +
Sbjct: 339 SFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCE 398
Query: 231 -----GVM-DISVYHGLIKGLLKLRRAGEATQVFREMIKRGCEPTMHTYIMLLQGHLGRR 284
G+M S ++ ++K + K+ A ++ + I +G P HTY L++G +
Sbjct: 399 VMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGN 458
Query: 285 G-------------RKGTDPLVNFDTIFVGGLVKVGKAREYIKYVERVMNRGLEVPRFD- 330
RK + F ++ V GL GK KY+ ++M + L P D
Sbjct: 459 DIDQALKLFYEMEYRKMSPGFEVFRSLIV-GLCTCGKVEAGEKYL-KIMKKRLIEPNADI 516
Query: 331 YNKFLHYF 338
Y+ + F
Sbjct: 517 YDALIKAF 524