Miyakogusa Predicted Gene

Lj2g3v1252800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1252800.1 Non Chatacterized Hit- tr|B4FWU8|B4FWU8_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=2,65.57,0.000000000000001,Eaf7,Chromatin modification-related
protein EAF7; seg,NULL; MRG-BINDING PROTEIN,Chromatin
modificati,CUFF.36588.1
         (122 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26470.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   132   5e-32

>AT1G26470.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: regulation of transcription; LOCATED IN:
           nucleus, H4/H2A histone acetyltransferase complex;
           EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
           growth stages; CONTAINS InterPro DOMAIN/s: CT20
           (InterPro:IPR012423); Has 60 Blast hits to 60 proteins
           in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26;
           Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes -
           2 (source: NCBI BLink). | chr1:9155134-9156036 FORWARD
           LENGTH=133
          Length = 133

 Score =  132 bits (332), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/108 (65%), Positives = 85/108 (78%)

Query: 15  QDGMSVHSPCKPHPSSASSLPKDXXXXXXXXXXXXXXXIYPPMKLQGIHRHFVLYGLMDF 74
           QDG+SVHSPCK  PSSASSL K+               IYPP+KL+GIHRHFVLYGLM++
Sbjct: 19  QDGLSVHSPCKALPSSASSLSKEQSQVELELRLLEALEIYPPVKLRGIHRHFVLYGLMEY 78

Query: 75  LRRRFDRHFSSEEVLQLLDRFYNLEMLKTDDEEIESLNHEEDFCLPES 122
           L R FDR F+++EVLQLLDRFYN+EMLK+DDE+I+ LNHEEDF LP+S
Sbjct: 79  LGRSFDRPFTADEVLQLLDRFYNIEMLKSDDEDIDILNHEEDFTLPQS 126