Miyakogusa Predicted Gene
- Lj2g3v1252790.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1252790.1 Non Chatacterized Hit- tr|E1ZD94|E1ZD94_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,27.7,3e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR,Pentatricopeptide repeat; PPR: pentatricopeptid,CUFF.36592.1
(609 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 735 0.0
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 72 1e-12
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 69 8e-12
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 64 2e-10
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 64 3e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 64 4e-10
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 6e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 59 7e-09
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 56 7e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 7e-08
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 55 2e-07
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 54 3e-07
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 53 5e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 8e-07
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 52 8e-07
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 9e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 52 1e-06
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 4e-06
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 50 4e-06
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
>AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9151816-9154407 FORWARD
LENGTH=630
Length = 630
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/615 (58%), Positives = 454/615 (73%), Gaps = 12/615 (1%)
Query: 1 MSQMAILHRSRFLLSKPTAIRTIATFPFLSQXXXXXXXXX---XXXXXXXXXXXXXXXXX 57
+S + L + F + P IR I+ PFLSQ
Sbjct: 11 ISLLKTLKPNPFTSASP--IRAISGTPFLSQDPLLATESTDHDPSNHQSTSTPLPPNPAT 68
Query: 58 GSPLYGENWXXXXXXXXXXXXXXXXLGYTGRT------TLSESYDSLELQNLFGEYMASQ 111
GSPLY ENW LG+ + LSE+ D L N+F ++ ASQ
Sbjct: 69 GSPLYQENWRSPIPNTPSFNQSLVPLGFLNQAPAPRIRALSETLDMNSLLNMFADWTASQ 128
Query: 112 KWDEVKDLFEAWVRSLDKNGKPNMPDVNLYNHYLRANLMIGASAAELLDILAQMDDFNVV 171
+W ++K LFE WVRSLDKNGKPN PDVNLYNHYLRANLM+GASA ++LD++A M++F+V
Sbjct: 129 RWSDMKQLFEVWVRSLDKNGKPNKPDVNLYNHYLRANLMMGASAGDMLDLVAPMEEFSVE 188
Query: 172 PNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVIGMLFLTDQIDAAF 231
PNTAS+NLVLK+M+QA ET AA KLLERML G +SLPDDESYDLVIGM F + D A
Sbjct: 189 PNTASYNLVLKAMYQARETEAAMKLLERMLLLGKDSLPDDESYDLVIGMHFGVGKNDEAM 248
Query: 232 KYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIERCKATEKNKALCPSWTTCYFI 291
K +D LKSG++LS +F++CVRSCV KGR D+LV+IIERCKA ++NK+LCPSW C +I
Sbjct: 249 KVMDTALKSGYMLSTSVFTECVRSCVAKGRTDTLVSIIERCKAVDRNKSLCPSWILCNYI 308
Query: 292 AEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVSALLTAGRTYSSELLG 351
AE+A++EDNSKLAFY+ EFM KW+ +GE A P V+ SVDEGLVV+ L +A RT SS L+
Sbjct: 309 AEVAIQEDNSKLAFYAFEFMFKWITRGEMARPSVIFSVDEGLVVAGLASAARTCSSSLVE 368
Query: 352 ASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQE-SEDLF 410
SW +L+ SLR +K NP SY+ +I A AS+GNLQKAF +L+E ESAY DS +E E++
Sbjct: 369 GSWTILKQSLRGRKAANPASYIAKINAYASLGNLQKAFTSLHELESAYADSEKEVVEEML 428
Query: 411 CPFTSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRA 470
PFTSL+PLVVACSKKGFETLD VYFQLE+LS+ + PYKSVAALNCII GCAN WDLDRA
Sbjct: 429 SPFTSLYPLVVACSKKGFETLDEVYFQLESLSQGDTPYKSVAALNCIILGCANTWDLDRA 488
Query: 471 YQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVD 530
YQTFE+I ++FGLTP+I SYN L++AFGK+KKT EA+ VFEHL S+G+KP++++YS+LVD
Sbjct: 489 YQTFEAISASFGLTPNIDSYNALLYAFGKVKKTFEATNVFEHLVSIGVKPDSRTYSLLVD 548
Query: 531 AHLINRDVKSALSVVDDMLAAGFQPTKEILKKIRRRCIREMDYETNDRLELLARDLNYRL 590
AHLINRD KSAL+VVDDM+ AGF+P++E LKK+RRRC+REMD E +D++E LA+ R+
Sbjct: 549 AHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDDENDDQVEALAKKFQIRM 608
Query: 591 GAEARQNILFNLNYS 605
G+E R+N+LFN++YS
Sbjct: 609 GSENRRNMLFNIDYS 623
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 103/511 (20%), Positives = 198/511 (38%), Gaps = 71/511 (13%)
Query: 96 DSLELQNLFGEYMASQKWDEVKDLFEAWVRSLDKNGKPNMPDVNLYNHYLRANLMIGASA 155
D + ++ G + + DE ++FE L+KN + +P YN +++G +
Sbjct: 272 DEVTYTSMIGVLCKANRLDEAVEMFE----HLEKNRR--VPCTYAYN-----TMIMGYGS 320
Query: 156 AELLD----ILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDD 211
A D +L + +P+ ++N +L + + G+ A K+ E M + ++ P+
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK---DAAPNL 377
Query: 212 ESYDLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIER 271
+Y+++I ML ++D AF+ D K+G +++ + V +LD + E
Sbjct: 378 STYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE- 436
Query: 272 CKATEKNKALCP--SWTTC---------------YFIAEIALREDNSKLAFYSLEFMAKW 314
E + +C T C Y + E L D + + +
Sbjct: 437 ----EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 315 MVKGERANPPVLLSVDEGLVVSALLTAGRTYSSELLGAS-----WAVLRHSLRKKKVPNP 369
G + + + S L TY + A A+ ++ VP+
Sbjct: 493 FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDA 552
Query: 370 ESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQESEDL----FCPFTSL---HPLVVA 422
SY I+ L G + + Y + + + ++ FC + + L+
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 423 CSKKGFET-----------------LDNVYFQLENLSRSERPYKSVAALNCIISGCANIW 465
KGFE LD Y E ++S+R +V + +I G +
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE-AKSKRIELNVVIYSSLIDGFGKVG 671
Query: 466 DLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSY 525
+D AY E + GLTP+++++N L+ A K ++ +EA F+ + L PN +Y
Sbjct: 672 RIDEAYLILEELMQK-GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730
Query: 526 SVLVDAHLINRDVKSALSVVDDMLAAGFQPT 556
+L++ R A +M G +P+
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/386 (19%), Positives = 157/386 (40%), Gaps = 36/386 (9%)
Query: 172 PNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVIGMLFLTDQIDAAF 231
P+ ++ ++ + +A A ++ E + N +P +Y+ +I + D A+
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHL--EKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 232 KYIDLTLKSGHVLSMKIFSDCVRSCVNK-GRLDSLVTIIERCKATEKNKALCPSWTTCYF 290
++ G + S+ I +C+ +C+ K G++D + + E E K P+ +T
Sbjct: 329 SLLERQRAKGSIPSV-IAYNCILTCLRKMGKVDEALKVFE-----EMKKDAAPNLSTYNI 382
Query: 291 IAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVSALLTAGRTYSSELL 350
+ ++ R AF + M K + P + +V+ + R S+ L
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLF------PNVRTVN--------IMVDRLCKSQKL 428
Query: 351 GASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQESEDLF 410
+ A+ K P+ ++ I L +G + A+ YE DS+ + +
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV---YEKML-DSDCRTNSIV 484
Query: 411 CPFTSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRA 470
+TSL +K E +Y + N + S + LN + + ++
Sbjct: 485 --YTSLIKNFFNHGRK--EDGHKIYKDMINQNCS----PDLQLLNTYMDCMFKAGEPEKG 536
Query: 471 YQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVD 530
FE I++ PD SY+ L+H K +E ++F + G + ++Y++++D
Sbjct: 537 RAMFEEIKAR-RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 595
Query: 531 AHLINRDVKSALSVVDDMLAAGFQPT 556
V A ++++M GF+PT
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTKGFEPT 621
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 199/476 (41%), Gaps = 52/476 (10%)
Query: 83 LGYTGRTTLSESYDSLELQNLFGEYMASQKWDEVKDLFEAWVRSLDKNGKPNMPDVNLYN 142
+G + L ESY ELQ DE+ + + W+ +D+ G PD + YN
Sbjct: 116 MGTSTFLILIESYAQFELQ------------DEILSVVD-WM--IDEFGLK--PDTHFYN 158
Query: 143 HYLRANLMIGASAAELLDIL-AQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERML 201
L NL++ ++ +L++I A+M + + P+ ++FN+++K++ +A + A +LE M
Sbjct: 159 RML--NLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMP 216
Query: 202 ESGNESLPDDESYDLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGR 261
G +PD++++ V+ +D A + + ++ G S + V +GR
Sbjct: 217 SYG--LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGR 274
Query: 262 LDSLVTIIERCKATEKNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERA 321
++ + I+ P T + + + K A ++ M + E
Sbjct: 275 VEDALNFIQE---MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ-----EGY 326
Query: 322 NPPVLLSVDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALAS 381
+P V V+S L G + + VL + + PN +Y I L
Sbjct: 327 DPDVYTY---NSVISGLCKLGE------VKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 382 MGNLQKAFGALYEYESAYGDSNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLENL 441
+++A E A +++ C F SL + C + V +L
Sbjct: 378 ENQVEEA------TELARVLTSKGILPDVCTFNSL--IQGLCLTRNHR----VAMELFEE 425
Query: 442 SRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLK 501
RS+ N +I + LD A + ++ + G + +YN L+ F K
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVITYNTLIDGFCKAN 484
Query: 502 KTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTK 557
KT EA ++F+ + G+ N+ +Y+ L+D +R V+ A ++D M+ G +P K
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 14/223 (6%)
Query: 333 LVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGAL 392
+VV L G + EL+ A ++ H ++ PN Y I+ GN+ +A G L
Sbjct: 304 VVVFGTLVDGFCKARELVTAR-SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 393 YEYESAYGDSNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVA 452
E ES S D+F ++ L C + + ++ +++N ER + S A
Sbjct: 363 SEMESL-----NLSPDVFTYTILINGL---CIEDQVAEANRLFQKMKN----ERIFPSSA 410
Query: 453 ALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEH 512
N +I G +++++A + ++ G+ P+I +++ L+ + ++ A ++
Sbjct: 411 TYNSLIHGYCKEYNMEQALDLCSEMTAS-GVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469
Query: 513 LTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
+T G+ P+ +Y+ L+DAH ++K AL + DML AG P
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP 512
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/423 (19%), Positives = 181/423 (42%), Gaps = 37/423 (8%)
Query: 135 MPDVNLYNHYLRANLMIGASAAELLDILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAE 194
MP V YN L A + + + ++ +M + V PN ++N++++ AG A
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVAL 225
Query: 195 KLLERMLESGNESLPDDESYDLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVR 254
L ++M G LP+ +Y+ +I +ID FK + G ++ ++ +
Sbjct: 226 TLFDKMETKG--CLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 255 SCVNKGRLDSLVTIIERCKATEKNK-ALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAK 313
+GR+ + ++ TE N+ T + + +E N F+ M
Sbjct: 284 GLCREGRMKEVSFVL-----TEMNRRGYSLDEVTYNTLIKGYCKEGN----FHQALVMHA 334
Query: 314 WMVKGERANPPVLLSVDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYL 373
M++ P V+ ++ ++ AG + + L + PN +Y
Sbjct: 335 EMLR-HGLTPSVITYTS---LIHSMCKAGN------MNRAMEFLDQMRVRGLCPNERTYT 384
Query: 374 GRIYALASMGNLQKAFGALYEYESAYGDSNQESEDLFCP-FTSLHPLVVACSKKGFETLD 432
+ + G + +A+ L E +++ F P + + L+ G ++
Sbjct: 385 TLVDGFSQKGYMNEAYRVLREM----------NDNGFSPSVVTYNALINGHCVTG--KME 432
Query: 433 NVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNG 492
+ LE++ + + V + + ++SG +D+D A + + G+ PD +Y+
Sbjct: 433 DAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTITYSS 490
Query: 493 LMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAG 552
L+ F + ++T EA ++E + +GL P+ +Y+ L++A+ + D++ AL + ++M+ G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 553 FQP 555
P
Sbjct: 551 VLP 553
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 178/452 (39%), Gaps = 54/452 (11%)
Query: 112 KWDEVKDLFEAWVRSLDKNGKPNMPDVNLYNHYLRANLMIGASAAELLDILAQMDDFNVV 171
K++ K++F +RS PD Y L G E + + M +VV
Sbjct: 320 KYERAKEVFAEMLRS------GLSPDSTTYRSLLMEACKKG-DVVETEKVFSDMRSRDVV 372
Query: 172 PNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVIGMLFLTDQIDAAF 231
P+ F+ ++ ++G A + E+G +PD+ Y ++I I A
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG--LIPDNVIYTILIQGYCRKGMISVAM 430
Query: 232 KYIDLTLKSGHVLSMKIFSDCVRS-CVNK--GRLDSLVTIIERCKATEKNKALCPSWTTC 288
+ L+ G + + ++ + C K G D L + TE+ AL P T
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN-----EMTER--ALFPDSYTL 483
Query: 289 YFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVSALLTAGRTYSSE 348
+ + + N + A +E K K R + ++ +G G+ +
Sbjct: 484 TILIDGHCKLGNLQNA---MELFQKMKEKRIRLDVVTYNTLLDGF--------GKVGDID 532
Query: 349 LLGASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQESED 408
WA + + K+ +P P SY + AL S G+L +AF E S
Sbjct: 533 TAKEIWADM---VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK---------- 579
Query: 409 LFCPFTSLHPLVVACSK--KGFETLDNVYFQLENLSR--SERPYKSVAALNCIISGCANI 464
++ P V+ C+ KG+ N L + SE + N +I G
Sbjct: 580 ------NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633
Query: 465 WDLDRAYQTFESIQS-TFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAK 523
++ +A+ + ++ GL PD+ +YN ++H F + + EA V + G+ P+
Sbjct: 634 ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRS 693
Query: 524 SYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
+Y+ +++ + ++ A + D+ML GF P
Sbjct: 694 TYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 414 TSLHPLVVACSKKGFETLDNVYFQLENLSRSERP-YKSVAALNCIISGCANIWDLDRAYQ 472
T LH L C +K D ++ ++ +ER + L +I G + +L A +
Sbjct: 450 TILHGL---CKRKMLGEADKLFNEM-----TERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 473 TFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAH 532
F+ ++ + D+ +YN L+ FGK+ A +++ + S + P SYS+LV+A
Sbjct: 502 LFQKMKEK-RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 533 LINRDVKSALSVVDDMLAAGFQPTKEI 559
+ A V D+M++ +PT I
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMI 587
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 176/431 (40%), Gaps = 45/431 (10%)
Query: 131 GKPNMPDVNLYNHYLRANLMIGA--SAAELLDILAQMDDFNVVPNTASFNLVLKSMHQAG 188
G +PDV YN +MI A E+ + L+ +D +V P+ ++N +L+S+ +G
Sbjct: 165 GSGAVPDVITYN------VMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSG 218
Query: 189 ETFAAEKLLERMLESGNESLPDDESYDLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKI 248
+ A ++L+RML+ + PD +Y ++I + A K +D G +
Sbjct: 219 KLKQAMEVLDRMLQ--RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 249 FSDCVRSCVNKGRLDSLVTIIERCKATEKNKALCPSWTTCYFIAEIALREDNSKLAFYSL 308
++ V +GRLD + + ++ P+ T I LR S +
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSS----GCQPNVIT----HNIILRSMCSTGRWMDA 328
Query: 309 E-FMAKWMVKGERANPPVLLSVDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVP 367
E +A + KG +P V V ++++ L G LLG + +L + P
Sbjct: 329 EKLLADMLRKG--FSPSV---VTFNILINFLCRKG------LLGRAIDILEKMPQHGCQP 377
Query: 368 NPESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQESEDLFCPFTSLHPLVVACSKKG 427
N SY ++ + +A L S + + + ++ A K G
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYL---------ERMVSRGCYPDIVTYNTMLTALCKDG 428
Query: 428 -FETLDNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPD 486
E + QL S+ P + N +I G A +A + + +++ L PD
Sbjct: 429 KVEDAVEILNQLS--SKGCSPV--LITYNTVIDGLAKAGKTGKAIKLLDEMRAK-DLKPD 483
Query: 487 IHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVD 546
+Y+ L+ + K EA K F +G++PNA +++ ++ +R A+ +
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543
Query: 547 DMLAAGFQPTK 557
M+ G +P +
Sbjct: 544 FMINRGCKPNE 554
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 161/395 (40%), Gaps = 38/395 (9%)
Query: 163 AQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVIGMLF 222
A M + N +FN+++ + + G+ A+ L M G + P +Y+ ++
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIK--PTIVTYNTLVQGFS 271
Query: 223 LTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIERCKATEKNKALC 282
L +I+ A I G M+ ++ + N+GR ++ + K L
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREM-------KEIGLV 324
Query: 283 PSWTTCYFIAEIALREDNSKLAF-YSLEFMAKWMVKGERANPPVLLSVDEGLVVSALLTA 341
P + + + ++AF Y E + + MV P + + ++ L
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV-------PTFYTYNT--LIHGLFME 375
Query: 342 GRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYESAYGD 401
+ ++E+L +R K V + +Y I G+ +KAF ++ D
Sbjct: 376 NKIEAAEIL------IREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL---HDEMMTD 426
Query: 402 SNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAALNCIISGC 461
Q ++ FT + V C K D ++ ++ + + +P + +N ++ G
Sbjct: 427 GIQPTQ-----FTYTSLIYVLCRKNKTREADELFEKV--VGKGMKP--DLVMMNTLMDGH 477
Query: 462 ANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPN 521
I ++DRA+ + + + PD +YN LM K EA ++ + G+KP+
Sbjct: 478 CAIGNMDRAFSLLKEMD-MMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 536
Query: 522 AKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPT 556
SY+ L+ + D K A V D+ML+ GF PT
Sbjct: 537 HISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPT 571
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 455 NCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLT 514
N +I GC+N DL+ A+ + + G+ P ++YN L+H K A + +
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQ-GMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 389
Query: 515 SLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTK 557
G+ ++ +Y++L++ + + D K A ++ D+M+ G QPT+
Sbjct: 390 EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 170/409 (41%), Gaps = 87/409 (21%)
Query: 156 AELLDILAQMDDFNVVPNTA-------------SFNLVLKSMHQAGETFAAEKLLERMLE 202
+LL+++A+M F+VV N + NL++ Q+ + + A L +M++
Sbjct: 76 TKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMK 135
Query: 203 SGNESLPDDESYDLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRL 262
G E PD ++ +I L ++++ A ++ ++ M I D V
Sbjct: 136 LGFE--PDIVTFTSLINGFCLGNRMEEAMSMVN------QMVEMGIKPDVVM-------- 179
Query: 263 DSLVTIIER-CKATEKNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERA 321
TII+ CK N Y+L + G R
Sbjct: 180 --YTTIIDSLCKNGHVN---------------------------YALSLFDQMENYGIR- 209
Query: 322 NPPVLLSVDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALAS 381
P V++ +V+ L +GR ++ ++LR ++K P+ ++ I A
Sbjct: 210 -PDVVMYTS---LVNGLCNSGRWRDAD------SLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 382 MGNLQKAFGALYEYESAYGDSNQES--EDLFCPFTSLHPLVVACSKKGFETLDNVYFQLE 439
G A E Y + + S ++F +TSL + C + + +++ +E
Sbjct: 260 EGKFLDA-------EELYNEMIRMSIAPNIF-TYTSL--INGFCMEGCVDEARQMFYLME 309
Query: 440 NLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGK 499
++ + V A +I+G +D A + F + S GLT + +Y L+ FG+
Sbjct: 310 ----TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM-SQKGLTGNTITYTTLIQGFGQ 364
Query: 500 LKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDM 548
+ K + A +VF H+ S G+ PN ++Y+VL+ N VK AL + +DM
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 27/255 (10%)
Query: 320 RANPPVLLSVDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYAL 379
R PP L + G+V+ A + ++ ++LR + VPN Y I++L
Sbjct: 211 RKIPPTLFTF--GVVMKAFCAVNE------IDSALSLLRDMTKHGCVPNSVIYQTLIHSL 262
Query: 380 ASMGNLQKAFGALYEY--ESAYGDSNQESEDLF--CPFTSLHPLVVACSK---KGFETLD 432
+ + +A L E D+ ++ + C F ++ ++ +GF D
Sbjct: 263 SKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDD 322
Query: 433 NVYFQLEN-LSRSER-----------PYKSVAALNCIISGCANIWDLDRAYQTFESIQST 480
Y L N L + R P + N +I G LD A + ++
Sbjct: 323 ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 481 FGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKS 540
+G+ PD+ +YN L++ + K A +V + + G KPN SY++LVD +
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 541 ALSVVDDMLAAGFQP 555
A +V+++M A G +P
Sbjct: 443 AYNVLNEMSADGLKP 457
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 90/455 (19%), Positives = 170/455 (37%), Gaps = 95/455 (20%)
Query: 117 KDLFEAWVRSLDKNGKPNM---------------PDVNLYNHYLRANLMIGASAAELLDI 161
+ LF + +R DK G P P YN L L+ G ++
Sbjct: 146 ESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI-LVSGNCHKVAANV 204
Query: 162 LAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVIGML 221
M + P +F +V+K+ E +A LL M + G +P+ Y +I L
Sbjct: 205 FYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHG--CVPNSVIYQTLIHSL 262
Query: 222 FLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIERCKATEKNKAL 281
++++ A + ++ G V + F+D I+ CK N+A
Sbjct: 263 SKCNRVNEALQLLEEMFLMGCVPDAETFND---------------VILGLCKFDRINEAA 307
Query: 282 CPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVSALLTA 341
+ + + +++G + + G +++ L
Sbjct: 308 ---------------------------KMVNRMLIRGFAPD-----DITYGYLMNGLCKI 335
Query: 342 GRTYSSELLGASWAVLRHSLRKKKVPNPESYLGR--IYALASMGNLQKAFGALYEYESAY 399
GR +++ L ++P PE + I+ + G L A L + ++Y
Sbjct: 336 GRVDAAKDLFY------------RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 400 GDSNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLENLS--RSERPYKSVAALNCI 457
G C + SL + K+G V LE L R++ +V + +
Sbjct: 384 GIVPD-----VCTYNSL---IYGYWKEGL-----VGLALEVLHDMRNKGCKPNVYSYTIL 430
Query: 458 ISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLG 517
+ G + +D AY + + GL P+ +N L+ AF K + EA ++F + G
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 518 LKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAG 552
KP+ +++ L+ ++K AL ++ DM++ G
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 189/472 (40%), Gaps = 57/472 (12%)
Query: 102 NLFGEYMASQKWDEVKDLFEAWVRSLDKNGK--------PNMPDV----NLYNHYLRANL 149
NLFG+ + S+ + + + F + ++ K K M ++ NLY + + N
Sbjct: 67 NLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINC 125
Query: 150 MIGASAAEL-LDILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESL 208
S L L +LA+M P+ + N +L A L+ +M+E G +
Sbjct: 126 FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ-- 183
Query: 209 PDDESYDLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTI 268
PD +++ +I LF ++ A +D + G + + V +G +D +++
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 269 IERCKATEKNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLS 328
+ K E+ K + P I + N A L + KG R N
Sbjct: 244 L---KKMEQGK-IEPGVVIYNTIIDALCNYKNVNDA---LNLFTEMDNKGIRPN-----V 291
Query: 329 VDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKA 388
V ++ L GR + L L + +K PN ++ I A G L +A
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRL------LSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 389 FGALYEYESAYGDSNQES--EDLFCPFTSLHPLVVACSKKGF---ETLDNVYFQLENLSR 443
E Y + + S D+F ++SL GF + LD E L
Sbjct: 346 -------EKLYDEMIKRSIDPDIF-TYSSL--------INGFCMHDRLDEAKHMFE-LMI 388
Query: 444 SERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKT 503
S+ + +V N +I G +D + F + S GL + +Y L+H F + ++
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM-SQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 504 HEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
A VF+ + S G+ P+ +YS+L+D N V++AL V + + + +P
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 154/386 (39%), Gaps = 37/386 (9%)
Query: 172 PNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVIGMLFLTDQIDAAF 231
P+ + N +L A L+++M+E G + PD ++ +I LFL ++ A
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK--PDTVTFTTLIHGLFLHNKASEAV 203
Query: 232 KYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIERCKATEKNKALCPSWTTCYFI 291
ID ++ G + + V +G D + ++ + +A + + T +
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 292 AEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVSALLTAGRTYSSELLG 351
+ +D +L + KG R N S+ +S L GR + L
Sbjct: 264 CKYRHEDD-------ALNLFTEMENKGVRPNVITYSSL-----ISCLCNYGRWSDASRL- 310
Query: 352 ASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQESEDLFC 411
L + +K PN ++ I A G L KA E Y + + S D
Sbjct: 311 -----LSDMIERKINPNLVTFSALIDAFVKKGKLVKA-------EKLYEEMIKRSID--- 355
Query: 412 PFTSLHPLVVACSKKGFETLDNV--YFQLENLSRSERPYKSVAALNCIISGCANIWDLDR 469
P + ++ GF LD + Q+ L + +V N +I+G +D+
Sbjct: 356 PNIFTYSSLI----NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
Query: 470 AYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLV 529
+ F + S GL + +Y L+H F + + A VF+ + S+G+ PN +Y++L+
Sbjct: 412 GMELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470
Query: 530 DAHLINRDVKSALSVVDDMLAAGFQP 555
D N + A+ V + + + +P
Sbjct: 471 DGLCKNGKLAKAMVVFEYLQRSTMEP 496
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 368 NPESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQESEDLFCPFTSLHPLVVACSKKG 427
N +Y + AS+G+ KAF EY + ++E L + L+ AC K G
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAF----EY-----FTRLQNEGLDVDIFTYEALLKACCKSG 708
Query: 428 FETLDNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDI 487
+ + + +S P S N +I G A D+ A + ++ G+ PDI
Sbjct: 709 --RMQSALAVTKEMSARNIPRNSFV-YNILIDGWARRGDVWEAADLIQQMKKE-GVKPDI 764
Query: 488 HSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDD 547
H+Y + A K + A++ E + +LG+KPN K+Y+ L+ + ALS ++
Sbjct: 765 HTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEE 824
Query: 548 MLAAGFQPTKEI 559
M A G +P K +
Sbjct: 825 MKAMGIKPDKAV 836
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 169/417 (40%), Gaps = 76/417 (18%)
Query: 141 YNHYLRANLMIGASAAELLDILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERM 200
Y +R IG E + + +M + N +N +++ + + A ++ RM
Sbjct: 273 YTIMIRTMGRIG-KCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM 331
Query: 201 LESGNESLPDDESYDLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKG 260
+E+G P++ +Y L++ +L Q+ +++ S ++ I+S VR+ G
Sbjct: 332 VETGCR--PNEYTYSLLLNLLVAEGQLVRLDGVVEI---SKRYMTQGIYSYLVRTLSKLG 386
Query: 261 RLDSLVTIIERCKATEKNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGER 320
+ +E ++ C W+ + VKGER
Sbjct: 387 HV------------SEAHRLFCDMWS---------------------------FPVKGER 407
Query: 321 ANPPVLLSVDEGLVVSALLTAGRTYSS-ELLGASWAVLRHSLRKKKVPNPESYLGRIYAL 379
+ +L +L AG+T + E+L + +K V +++
Sbjct: 408 DSYMSMLE--------SLCGAGKTIEAIEMLS--------KIHEKGVVTDTMMYNTVFS- 450
Query: 380 ASMGNLQKAFGALYEYESAYGDSNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLE 439
++G L++ +E D S D+F + + L+ + + G +D E
Sbjct: 451 -ALGKLKQISHIHDLFEKMKKDG--PSPDIF----TYNILIASFGRVG--EVDEAINIFE 501
Query: 440 NLSRSE-RPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFG 498
L RS+ +P + + N +I+ D+D A+ F+ +Q GL PD+ +Y+ LM FG
Sbjct: 502 ELERSDCKP--DIISYNSLINCLGKNGDVDEAHVRFKEMQEK-GLNPDVVTYSTLMECFG 558
Query: 499 KLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
K ++ A +FE + G +PN +Y++L+D N A+ + M G P
Sbjct: 559 KTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTP 615
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 451 VAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVF 510
V N II+G L+ A F ++++ G+TPD+++YN L+ G EA K++
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Query: 511 EHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTKEILKKIRRR 566
+ GL+PN +++ L+ + ++ + A +V M+ GF P +++ R
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPNR 1111
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 177/452 (39%), Gaps = 53/452 (11%)
Query: 112 KWDEVKDLFEAWVRSLDKNGKPNMPDVNLYNHYLRANLMIGASAAELLDILAQMDDFNVV 171
K E +LFE V+ K PN N L N + + L +L +M D V
Sbjct: 588 KIQEAIELFEGMVQ---KGCPPNTITFNTLFDCLCKNDEVTLA----LKMLFKMMDMGCV 640
Query: 172 PNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVIGMLFLTDQIDAAF 231
P+ ++N ++ + + G+ A +M + PD + ++ + I+ A+
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL---VYPDFVTLCTLLPGVVKASLIEDAY 697
Query: 232 KYIDLTLKSGHVLSMKIF-SDCVRSCVNKGRLDSLVTIIERCKAT----EKNKALCPSWT 286
K I L + +F D + S + + +D+ V+ ER A + + L P
Sbjct: 698 KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP--- 754
Query: 287 TCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVSALLTAGRTYS 346
I + + +N A E K + G + P L++ LL A
Sbjct: 755 ----IIRYSCKHNNVSGARTLFEKFTKDL--GVQPKLPTY-----NLLIGGLLEA----- 798
Query: 347 SELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQES 406
+++ + V +P+ +Y + A G + + F E + ++N
Sbjct: 799 -DMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN--- 854
Query: 407 EDLFCPFTSLHPLVVACSKKGFETLD--NVYFQLENLSRSERPYKSVAAL-NCIISGCAN 463
T H +V++ K D ++Y+ L S+R + A +I G +
Sbjct: 855 -------TITHNIVISGLVKAGNVDDALDLYYDL----MSDRDFSPTACTYGPLIDGLSK 903
Query: 464 IWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAK 523
L A Q FE + +G P+ YN L++ FGK + A +F+ + G++P+ K
Sbjct: 904 SGRLYEAKQLFEGMLD-YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 524 SYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
+YSVLVD + V L ++ +G P
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 451 VAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVF 510
V ++ + A+ T + ++ G+ P++H+YN L+ ++ + +A ++F
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQ-GILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 511 EHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
++ SLG+KP A +Y V +D + + D SAL + M G P
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAP 466
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 61/107 (57%)
Query: 449 KSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASK 508
+SV +LN +++ D + F++ + +FG+TP+I + N L+ A K A K
Sbjct: 153 RSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYK 212
Query: 509 VFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
V + + S+GL PN +Y+ ++ ++ D++SA V+++ML G+ P
Sbjct: 213 VLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYP 259
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 8/174 (4%)
Query: 385 LQKAFGALYEYESAYGDSNQESEDLFCP-FTSLHPLVVACSKKG--FETLDNVYFQLENL 441
L A+G YE++ ++ + P + + ++ AC++ G +E L ++ ++
Sbjct: 182 LINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM--- 238
Query: 442 SRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLK 501
R E + N ++S CA D A F ++ G+ PD+ +Y+ L+ FGKL+
Sbjct: 239 -RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDG-GIVPDLTTYSHLVETFGKLR 296
Query: 502 KTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
+ + + + S G P+ SY+VL++A+ + +K A+ V M AAG P
Sbjct: 297 RLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP 350
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 8/159 (5%)
Query: 417 HPLVVACSK--KGFETLDNV---YFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAY 471
+P V+ C+K KGF TL N+ +E L + +P V A N +I+G + +D A
Sbjct: 121 NPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP--DVFAYNALINGFCKMNRIDDAT 178
Query: 472 QTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDA 531
+ + ++S +PD +YN ++ + K A KV L S +P +Y++L++A
Sbjct: 179 RVLDRMRSK-DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEA 237
Query: 532 HLINRDVKSALSVVDDMLAAGFQPTKEILKKIRRRCIRE 570
++ V AL ++D+ML+ G +P I R +E
Sbjct: 238 TMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 96/469 (20%), Positives = 177/469 (37%), Gaps = 86/469 (18%)
Query: 92 SESYDSLELQNLFGEYMASQKWDEVKDLFEAWVRSLDKNGKPNMPDVNLYNHYLRA---- 147
S + ++ +F S + E L E VR K PDV L ++
Sbjct: 84 SLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVR------KGYNPDVILCTKLIKGFFTL 137
Query: 148 -NLMIGASAAELLDILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNE 206
N+ E+L+ Q P+ ++N ++ + A ++L+RM +
Sbjct: 138 RNIPKAVRVMEILEKFGQ-------PDVFAYNALINGFCKMNRIDDATRVLDRM--RSKD 188
Query: 207 SLPDDESYDLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLV 266
PD +Y+++IG L ++D A K ++ L ++ ++ + + + +G +D +
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248
Query: 267 TIIERCKATEKNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVL 326
+++ + + L P T I +E AF E + +KG P V
Sbjct: 249 KLMDEMLS----RGLKPDMFTYNTIIRGMCKEGMVDRAF---EMVRNLELKG--CEPDV- 298
Query: 327 LSVDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQ 386
+ +++ ALL G+ E L + +K PN +Y I L G ++
Sbjct: 299 --ISYNILLRALLNQGKWEEGEKL------MTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 387 KAFGALYEYESAYGDSNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLENLSRSER 446
+A L + + S D PL+ A ++G
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYD---------PLIAAFCREG------------------- 382
Query: 447 PYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEA 506
LD A + E++ S G PDI +YN ++ K K +A
Sbjct: 383 -------------------RLDVAIEFLETMISD-GCLPDIVNYNTVLATLCKNGKADQA 422
Query: 507 SKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
++F L +G PN+ SY+ + A + D AL ++ +M++ G P
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 170/424 (40%), Gaps = 44/424 (10%)
Query: 139 NLYNHYLRANLMIGASAAEL-LDILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLL 197
NLY + + N S L L +L +M P+ + + +L A L+
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 198 ERMLESGNESLPDDESYDLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCV 257
++M+E G PD ++ +I LFL ++ A +D ++ G ++ + V
Sbjct: 179 DQMVEMGYR--PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 258 NKGRLDSLVTIIERCKATEKNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVK 317
+G +D ++ + +A + + T + + +D +L + K
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD-------ALNLFTEMENK 289
Query: 318 GERANPPVLLSVDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIY 377
G R N + S+L++ Y E + +L + +K PN ++ I
Sbjct: 290 GVRPNV---------ITYSSLISCLCNY--ERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 378 ALASMGNLQKAFGALYEYESAYGDSNQES--EDLFCPFTSLHPLVVACSKKGF---ETLD 432
A G L +A E Y + + S D+F ++SL GF + LD
Sbjct: 339 AFVKEGKLVEA-------EKLYDEMIKRSIDPDIF-TYSSL--------INGFCMHDRLD 382
Query: 433 NVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNG 492
E L S+ + +V N +I+G +D + F + S GL + +Y
Sbjct: 383 EAKHMFE-LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM-SQRGLVGNTVTYTT 440
Query: 493 LMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAG 552
L+H F + + A VF+ + S G+ PN +Y+ L+D N ++ A+ V + + +
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 553 FQPT 556
+PT
Sbjct: 501 MEPT 504
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/418 (20%), Positives = 176/418 (42%), Gaps = 38/418 (9%)
Query: 164 QMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVIGMLFL 223
+M ++ P+ +FN +LK + +AG AE +L+ M + G +PD ++ ++
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG--FVPDAFTFSILFDGYSS 331
Query: 224 TDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIERCKATEKNKALCP 283
++ +AA + + SG ++ S + + +G+++ I+ R E K L P
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGR----EMAKGLVP 387
Query: 284 SWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVSALLTAGR 343
+ + + R+ + A +E M K +K + L + L+ R
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH------------LAYNCLI---R 432
Query: 344 TYS--SELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYESAYGD 401
+ E+ A V + L K P+ E+Y L +G YE++ +
Sbjct: 433 RFCELGEMENAEKEVNKMKL-KGVSPSVETY----------NILIGGYGRKYEFDKCFDI 481
Query: 402 SNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAALNCIISGC 461
+ ++ P + ++ C KG + L+ + + R P V N +I GC
Sbjct: 482 LKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP--KVRIYNMLIDGC 539
Query: 462 ANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPN 521
+ ++ A++ F G+ ++ +YN L+ K EA + ++ GLKP+
Sbjct: 540 CSKGKIEDAFR-FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 522 AKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTKEILKKIRRRCIREMDYETNDRL 579
+Y+ L+ + +V+ +++ ++M +G +PT + + C +E E +RL
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKE-GIELTERL 655
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 185/444 (41%), Gaps = 45/444 (10%)
Query: 112 KWDEVKDLFEAWVRSLDKNGKPNMPDVN-LYNHYLRANLMIGASAAELLDILAQMDDFNV 170
K +++ E R + K PN N + + Y R ++GA + M+ +
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMK-----IEAMEKQGM 420
Query: 171 VPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVIGMLFLTDQIDAA 230
P+ ++N +++ + GE AEK + +M G P E+Y+++IG + D
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS--PSVETYNILIGGYGRKYEFDKC 478
Query: 231 FKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIERCKATEKNKALCPSWTTCYF 290
F + +G + ++ + + +C+ KG I++R +++ + P
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLI-NCLCKGSKLLEAQIVKR---DMEDRGVSPKVRIYNM 534
Query: 291 IAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVSALLTAGRTYSSELL 350
+ + + + AF F + + KG N LV L G + + +L
Sbjct: 535 LIDGCCSKGKIEDAF---RFSKEMLKKGIELN----------LVTYNTLIDGLSMTGKLS 581
Query: 351 GASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQESEDLF 410
A +L S RK P+ +Y I GN+Q+ ALYE G +
Sbjct: 582 EAEDLLLEIS-RKGLKPDVFTYNSLISGYGFAGNVQRCI-ALYEEMKRSG--------IK 631
Query: 411 CPFTSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRA 470
+ H L+ C+K+G E + ++ ++ S +P + N ++ A D+++A
Sbjct: 632 PTLKTYHLLISLCTKEGIELTERLFGEM-----SLKP--DLLVYNGVLHCYAVHGDMEKA 684
Query: 471 YQ-TFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLV 529
+ + I+ + GL D +YN L+ K+ K E + + + + ++P A +Y+++V
Sbjct: 685 FNLQKQMIEKSIGL--DKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 530 DAHLINRDVKSALSVVDDMLAAGF 553
H +D SA +M GF
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGF 766
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 19/132 (14%)
Query: 440 NLSRSERPYKSVAAL------------NCIISGCANIWDLDRAYQTFESIQSTFGLTPDI 487
NL R+++ ++ AL +I C+ + A F +++ T GL D+
Sbjct: 420 NLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK-TEGLKLDV 478
Query: 488 HSYNGLMHAFGKLKKTHEASKVFE---HLTSLGLKPNAKSYSVLVDAHLINRDVKSALSV 544
+YN LMH +G KTH+ +KVFE + S G+ P+ +Y++L+ + ++ + A +
Sbjct: 479 VTYNNLMHGYG---KTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEI 535
Query: 545 VDDMLAAGFQPT 556
+ +++ GF P+
Sbjct: 536 ISELIRRGFVPS 547
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 19/132 (14%)
Query: 440 NLSRSERPYKSVAAL------------NCIISGCANIWDLDRAYQTFESIQSTFGLTPDI 487
NL R+++ ++ AL +I C+ + A F +++ T GL D+
Sbjct: 420 NLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK-TEGLKLDV 478
Query: 488 HSYNGLMHAFGKLKKTHEASKVFE---HLTSLGLKPNAKSYSVLVDAHLINRDVKSALSV 544
+YN LMH +G KTH+ +KVFE + S G+ P+ +Y++L+ + ++ + A +
Sbjct: 479 VTYNNLMHGYG---KTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEI 535
Query: 545 VDDMLAAGFQPT 556
+ +++ GF P+
Sbjct: 536 ISELIRRGFVPS 547
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 141/372 (37%), Gaps = 70/372 (18%)
Query: 161 ILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVIGM 220
+L+ + D PN +F ++ + GE A L + M + G E PD +Y +I
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE--PDLIAYSTLIDG 330
Query: 221 LFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIERCKATEKNKA 280
F + K L G L + +FS + V G L + + +R
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR--------M 382
Query: 281 LCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVSALLT 340
LC + +P V V +++ L
Sbjct: 383 LC------------------------------------QGISPNV---VTYTILIKGLCQ 403
Query: 341 AGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYESAYG 400
GR Y E G +L+ + P+ +Y I GNL+ F ALYE G
Sbjct: 404 DGRIY--EAFGMYGQILKRGME----PSIVTYSSLIDGFCKCGNLRSGF-ALYEDMIKMG 456
Query: 401 DSNQESEDLFCPFTSLHPLVV-ACSKKGFETLDNVYFQLENLSRSERPYKSVAALNCIIS 459
+ P ++ ++V SK+G L + F ++ L +S R +V N +I
Sbjct: 457 ---------YPPDVVIYGVLVDGLSKQGL-MLHAMRFSVKMLGQSIR--LNVVVFNSLID 504
Query: 460 GCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLK 519
G + D A + F + +G+ PD+ ++ +M + EA +F + +GL+
Sbjct: 505 GWCRLNRFDEALKVFR-LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Query: 520 PNAKSYSVLVDA 531
P+A +Y L+DA
Sbjct: 564 PDALAYCTLIDA 575
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 455 NCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLT 514
N +I C + D DR+ + F ++ GL+PD+++YN + +F K++K +A ++ + +
Sbjct: 534 NILIRSCCSTGDTDRSVKLFAKMKEN-GLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Query: 515 SLGLKPNAKSYSVLVDA 531
+GLKP+ +YS L+ A
Sbjct: 593 RIGLKPDNFTYSTLIKA 609
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 455 NCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLT 514
N +I LD AY F+ ++S G PD +YN L+H K EA ++ + +
Sbjct: 184 NAVIDALVKSNSLDLAYLKFQQMRSD-GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQME 242
Query: 515 SLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTKEILK 561
G +PN +Y++L+D LI V AL ++ M P + ++
Sbjct: 243 QEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIR 289
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 450 SVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKV 509
S AA++ ++ G ++ A + + FG++P++ YN L+ + K +K HEA +
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVD-FGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 510 FEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQ 554
F+ + +GL+PN +YS+L+D + +ALS + +M+ G +
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 424 SKKGFETLDNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGL 483
S K +E++ + Q+++LS S L II +D+A + F + T G
Sbjct: 123 SHKKYESMWKILKQMKDLSLD----ISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGC 178
Query: 484 TPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALS 543
+ YN L+HA +K H A + + GLKP+ ++Y++LV+ +K A
Sbjct: 179 QQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQE 238
Query: 544 VVDDMLAAGFQP 555
+D+M GF P
Sbjct: 239 FLDEMSRRGFNP 250
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 467 LDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYS 526
LD A ++ +Q+ GL+PD +Y+ +++ GK A K+F + G PN +Y+
Sbjct: 450 LDIAMDMYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 527 VLVDAHLINRDVKSALSVVDDMLAAGFQPTK 557
+++D H R+ ++AL + DM AGF+P K
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 467 LDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYS 526
LD A ++ +Q+ GL+PD +Y+ +++ GK A K+F + G PN +Y+
Sbjct: 450 LDIAMDMYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 527 VLVDAHLINRDVKSALSVVDDMLAAGFQPTK 557
+++D H R+ ++AL + DM AGF+P K
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 467 LDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYS 526
LD A ++ +Q+ GL+PD +Y+ +++ GK A K+F + G PN +Y+
Sbjct: 450 LDIAMDMYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 527 VLVDAHLINRDVKSALSVVDDMLAAGFQPTK 557
+++D H R+ ++AL + DM AGF+P K
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 84/412 (20%), Positives = 154/412 (37%), Gaps = 88/412 (21%)
Query: 155 AAELLDILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESY 214
A + + + + V N AS+N+V+ + Q G A LL M G PD SY
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYT--PDVISY 284
Query: 215 DLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIER-CK 273
V+ ++D +K I++ + G + I+ S++ ++ R CK
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG-------------SIIGLLCRICK 331
Query: 274 ATEKNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGL 333
E +A ++ + +G + V ++ +G
Sbjct: 332 LAEAEEAF------------------------------SEMIRQGILPDTVVYTTLIDGF 361
Query: 334 VVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALY 393
+ A + E+ HS + P+ +Y I +G++ +A G L+
Sbjct: 362 CKRGDIRAASKFFYEM---------HS--RDITPDVLTYTAIISGFCQIGDMVEA-GKLF 409
Query: 394 EYESAYGDSNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAA 453
++FC L P V F L N Y + ++ + R + +
Sbjct: 410 H-------------EMFCK--GLEPDSVT-----FTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 454 LNC---------IISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTH 504
C +I G DLD A + + GL P+I +YN +++ K
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK-IGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 505 EASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPT 556
EA K+ + GL + +Y+ L+DA+ + ++ A ++ +ML G QPT
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 84/412 (20%), Positives = 154/412 (37%), Gaps = 88/412 (21%)
Query: 155 AAELLDILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESY 214
A + + + + V N AS+N+V+ + Q G A LL M G PD SY
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYT--PDVISY 284
Query: 215 DLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIER-CK 273
V+ ++D +K I++ + G + I+ S++ ++ R CK
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG-------------SIIGLLCRICK 331
Query: 274 ATEKNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGL 333
E +A ++ + +G + V ++ +G
Sbjct: 332 LAEAEEAF------------------------------SEMIRQGILPDTVVYTTLIDGF 361
Query: 334 VVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALY 393
+ A + E+ HS + P+ +Y I +G++ +A G L+
Sbjct: 362 CKRGDIRAASKFFYEM---------HS--RDITPDVLTYTAIISGFCQIGDMVEA-GKLF 409
Query: 394 EYESAYGDSNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAA 453
++FC L P V F L N Y + ++ + R + +
Sbjct: 410 H-------------EMFCK--GLEPDSVT-----FTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 454 LNC---------IISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTH 504
C +I G DLD A + + GL P+I +YN +++ K
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK-IGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 505 EASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPT 556
EA K+ + GL + +Y+ L+DA+ + ++ A ++ +ML G QPT
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%)
Query: 468 DRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSV 527
D+A F+ ++ FG P I SYN L++AF + K+ + +F + + G+ PN ++Y+V
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 528 LVDAHLINRDVKSALSVVDDMLAAGFQP 555
L+ ++ + A +D M GF+P
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKP 182
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 168/412 (40%), Gaps = 47/412 (11%)
Query: 159 LDILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVI 218
+DI+ QM + +V+P N L ++ Q A++L RM+ G + D+ + L++
Sbjct: 183 VDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDG--DNVTTQLLM 240
Query: 219 GMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIERCKATEKN 278
++ A + + ++ G ++S V++C L +++ K
Sbjct: 241 RASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMK----E 296
Query: 279 KALC-PSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVSA 337
K LC PS T + ++++ N A +K E + + ++V V +
Sbjct: 297 KKLCVPSQETYTSVILASVKQGNMDDAIR---------LKDEMLSDGISMNV----VAAT 343
Query: 338 LLTAGRTYSSELLGASWAVLRHSLRKK-KVPNPESYLGRIYALASMGNLQKAFGALYEYE 396
L G +++L+ A VL + K+ PN ++ I G ++KA Y+
Sbjct: 344 SLITGHCKNNDLVSA--LVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKAL-EFYKKM 400
Query: 397 SAYGDSNQESEDLFCPFTSLHPLVVACSK-----KGFETLDNVYFQLENLSRSERPYKSV 451
G L +H ++ K + + D + E +V
Sbjct: 401 EVLG--------LTPSVFHVHTIIQGWLKGQKHEEALKLFDESF---------ETGLANV 443
Query: 452 AALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFE 511
N I+S D A + ++S G+ P++ SYN +M + K A VF
Sbjct: 444 FVCNTILSWLCKQGKTDEATELLSKMESR-GIGPNVVSYNNVMLGHCRQKNMDLARIVFS 502
Query: 512 HLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTKEILKKI 563
++ GLKPN +YS+L+D N D ++AL VV+ M ++ + + + I
Sbjct: 503 NILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTI 554
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 438 LENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAF 497
L N+ +R S + N II G ++D A +E + G++P++ +Y LM+
Sbjct: 571 LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN-GISPNVITYTSLMNGL 629
Query: 498 GKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTK 557
K + +A ++ + + + G+K + +Y L+D +++SA ++ ++L G P++
Sbjct: 630 CKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQ 689
Query: 558 EI 559
I
Sbjct: 690 PI 691
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 19/230 (8%)
Query: 328 SVDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQK 387
SV +V+A + AG +S E G V+ +K +PN +Y I A G +
Sbjct: 351 SVTYNELVAAYVRAG--FSKEAAG----VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 388 AFGALYEYESAYGDSNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLENLSRSERP 447
A Y + A N C + ++ L+ G ++ N ++ +S
Sbjct: 405 ALKLFYSMKEAGCVPNT------CTYNAVLSLL------GKKSRSNEMIKMLCDMKSNGC 452
Query: 448 YKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEAS 507
+ A N +++ C N + F ++S G PD ++N L+ A+G+ +AS
Sbjct: 453 SPNRATWNTMLALCGNKGMDKFVNRVFREMKSC-GFEPDRDTFNTLISAYGRCGSEVDAS 511
Query: 508 KVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTK 557
K++ +T G +Y+ L++A D +S +V+ DM + GF+PT+
Sbjct: 512 KMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTE 561
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 426 KGFETLDNVYFQLENLSRSERPYKS---------VAALNCIISGCANIWDLDRAYQTFES 476
K + L N F+ + + +E ++ V + +I+G + + ++ +A F+
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 477 IQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINR 536
+ GLTP++ YN L+ F + + +A ++ + ++ GL PNA +Y ++D + +
Sbjct: 653 MVEE-GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Query: 537 DVKSALSVVDDMLAAGFQPTKEILKKIRRRCIREMDYE 574
D+ A + D+M G P + + C R D E
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 153/385 (39%), Gaps = 68/385 (17%)
Query: 164 QMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVIGMLFL 223
+M+ + + + SF +++ + A +L +M++ G E P ++ ++ L
Sbjct: 96 KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYE--PSIVTFGSLLHGFCL 153
Query: 224 TDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIERCKATEKNKALCP 283
++I AF + L +KSG+ ++ +++ + D L CK E N AL
Sbjct: 154 VNRIGDAFSLVILMVKSGYEPNVVVYNTLI---------DGL------CKNGELNIAL-- 196
Query: 284 SWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVSALLTAGR 343
E + + KG A+ +V L G
Sbjct: 197 -------------------------ELLNEMEKKGLGAD----------VVTYNTLLTGL 221
Query: 344 TYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYESAYGDSN 403
YS A+ +LR +++ P+ ++ I GNL +A E + D N
Sbjct: 222 CYSGRWSDAA-RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 404 QESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAALNCIISGCAN 463
+ + +H + +KK F+ L S+ + +V N +ISG
Sbjct: 281 NVTYNSIINGLCMHGRLYD-AKKTFD-----------LMASKGCFPNVVTYNTLISGFCK 328
Query: 464 IWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAK 523
+D + F+ + S G DI +YN L+H + ++ K A +F + S + P+
Sbjct: 329 FRMVDEGMKLFQRM-SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDII 387
Query: 524 SYSVLVDAHLINRDVKSALSVVDDM 548
++ +L+ +N +++SAL DDM
Sbjct: 388 THCILLHGLCVNGEIESALVKFDDM 412
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 425 KKG-FETLDNVYFQL-ENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFG 482
KKG F+T V Q+ EN ++ +A N II G + D A + + G
Sbjct: 642 KKGYFQTARGVLDQMFENFCAAD-----IATYNVIIQGLGKMGRADLASAVLDRLTKQGG 696
Query: 483 LTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSAL 542
DI YN L++A GK + EA+++F+H+ S G+ P+ SY+ +++ + +K A
Sbjct: 697 YL-DIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAY 755
Query: 543 SVVDDMLAAGFQP 555
+ ML AG P
Sbjct: 756 KYLKAMLDAGCLP 768
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 438 LENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAF 497
E + +S R + N II G N +D A+ F S+ S G+ PD+ +YN ++
Sbjct: 478 FEKMQKS-RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL-SDKGVKPDVVTYNVMIGGL 535
Query: 498 GKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTK 557
K EA +F + G P+ +Y++L+ AHL + S++ ++++M GF
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 595
Query: 558 EILKKI 563
+K +
Sbjct: 596 STIKMV 601
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 450 SVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKV 509
SV NC++S LD+A++ FE +Q PD+ S+N ++ K A +
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESL 586
Query: 510 FEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTKEILKKIRRRCIR 569
++ GL P+ +YS L++ L + A+S D M+ +GF+P I + + CI
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCIS 646
Query: 570 EMDYETNDRLELLAR 584
+ ET+ EL+ +
Sbjct: 647 Q--GETDKLTELVKK 659
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 457 IISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSL 516
+I G + +LDR F+ + G +P +YN L+ F KL + EAS++FE +
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLER-GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 517 GLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
G++PN +Y+ L+D K AL +++ M+ +P
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 164/416 (39%), Gaps = 49/416 (11%)
Query: 132 KPNMPDVNLYNHYLRANLMIGASAAELLDILAQMDDFNVVPNTASFNLVLKSMHQAGETF 191
+ + P YN +R +G E +I M + V PN ++ ++ + G+T
Sbjct: 276 RGDSPCAITYNTLIRGFCKLG-QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTK 334
Query: 192 AAEKLLERMLESGNESLPDDESYDLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSD 251
A +LL M+E E P+ +Y+++I L + A + ++L K ++
Sbjct: 335 EALQLLNLMIEKDEE--PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 252 CVRSCVNKGRLDS----LVTIIERCKATEKNKALCPSWTTCYFIAEIALREDNSKLAFYS 307
+ KG LD L +++ T+ P + + +E+ A
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTD------PDVISYNALIHGLCKENRLHQALDI 446
Query: 308 LEFMAKWMVKGERANPPVLLSVDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVP 367
+ + + + G+R +LL ++ L AG + L W + S K V
Sbjct: 447 YDLLVEKLGAGDRVTTNILL--------NSTLKAGDVNKAMEL---WKQISDS---KIVR 492
Query: 368 NPESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQESEDLFCPFTSLHPLVVACSKKG 427
N ++Y I G L A G L + + + D C +SL K+G
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS--ELQPSVFDYNCLLSSL-------CKEG 543
Query: 428 FETLDNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDI 487
+LD + E + R + + V + N +I G D+ A + S GL+PD+
Sbjct: 544 --SLDQAWRLFEEMQR-DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM-SRAGLSPDL 599
Query: 488 HSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALS 543
+Y+ L++ F KL EA F+ + G +P DAH+ + +K +S
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP---------DAHICDSVLKYCIS 646
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 144/341 (42%), Gaps = 32/341 (9%)
Query: 193 AEKLLERMLESGNESLPDDESYDLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDC 252
+EKL E L S ++L +Y+ +IG + I+ A I + G+ +S
Sbjct: 180 SEKLYEAFLLSQKQTL-TPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLV 238
Query: 253 VRSCVNKGRLDSLVTIIERCKATEKNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMA 312
++S ++DS V ++ K E++K I A D SK +L+ +
Sbjct: 239 IQSLTRSNKIDS-VMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSK----ALQLLG 293
Query: 313 KWMVKGERANPPVLLSVDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESY 372
G A L+S+ +SAL +GRT +E L + LR S K P +Y
Sbjct: 294 MAQATGLSAKTATLVSI-----ISALADSGRTLEAEAL---FEELRQSGIK---PRTRAY 342
Query: 373 LGRIYALASMGNLQKAFGALYEYESAYGDSNQESEDLFCPFTSLHPLVVACSKKG-FETL 431
+ G L+ A + E E ++ + L L+ A G +E+
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSL---------LIDAYVNAGRWESA 393
Query: 432 DNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYN 491
V ++E + +P V + +++G + + + +Q + ++S G+ PD YN
Sbjct: 394 RIVLKEME--AGDVQPNSFV--FSRLLAGFRDRGEWQKTFQVLKEMKS-IGVKPDRQFYN 448
Query: 492 GLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAH 532
++ FGK A F+ + S G++P+ +++ L+D H
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 451 VAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVF 510
V +N II G A D +A Q Q+T GL+ + ++ A +T EA +F
Sbjct: 269 VQLVNDIIMGFAKSGDPSKALQLLGMAQAT-GLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 511 EHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
E L G+KP ++Y+ L+ ++ +K A S+V +M G P
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSP 372
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 467 LDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYS 526
L+ A Q F ++ F + P S NGL+H F KL KT + + F+ + G +P +Y+
Sbjct: 208 LEEAIQCFSKMKR-FRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYN 266
Query: 527 VLVDAHLINRDVKSALSVVDDMLAAGFQP 555
+++D DV++A + ++M G P
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLVP 295
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 455 NCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLT 514
N +I G + LD FE ++ PD+ +YN L++ F K K + + +
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKD-MCCEPDVITYNALINCFCKFGKLPIGLEFYREMK 359
Query: 515 SLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTK 557
GLKPN SYS LVDA ++ A+ DM G P +
Sbjct: 360 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNE 402
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 457 IISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSL 516
+I GCA D+++A+ T + G+ P+I +YN L+ KL A ++ L
Sbjct: 761 LIHGCAIAGDINKAF-TLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQK 819
Query: 517 GLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGF 553
G+ PNA +Y+ L+D + + +V A+ + + M+ G
Sbjct: 820 GITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 482 GLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSA 541
GL PD+ SYN ++ F ++KK EA+ +FE + G P+ SY ++ D + A
Sbjct: 323 GLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEA 382
Query: 542 LSVVDDMLAAGFQPTKEILK 561
++D+ML G++P ++ L+
Sbjct: 383 AVILDEMLFKGYKPRRDRLE 402
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 443 RSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKK 502
RS + ++ +++ A ++A + FE +Q GL PD++ YN LM ++ +
Sbjct: 313 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED-GLEPDVYVYNALMESYSRAGY 371
Query: 503 THEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPT 556
+ A+++F + +G +P+ SY+++VDA+ A +V ++M G PT
Sbjct: 372 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 425
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 21/123 (17%)
Query: 438 LENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAF 497
+E+ SR+ PY G A I+ S+ G PD SYN ++ A+
Sbjct: 363 MESYSRAGYPY-----------GAAEIF----------SLMQHMGCEPDRASYNIMVDAY 401
Query: 498 GKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTK 557
G+ +A VFE + LG+ P KS+ +L+ A+ RDV ++V +M G +P
Sbjct: 402 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 461
Query: 558 EIL 560
+L
Sbjct: 462 FVL 464
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%)
Query: 470 AYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLV 529
A +F + G+ P++ YN +M A ++K A +F + GL+PN +YS+L+
Sbjct: 467 AATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILI 526
Query: 530 DAHLINRDVKSALSVVDDMLAAGFQPTKEILKKI 563
D N+D ++A V++ M A+ F+ + I I
Sbjct: 527 DGFFKNKDEQNAWDVINQMNASNFEANEVIYNTI 560
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 438 LENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAF 497
L+NL + +R S + N II G + D D A +T+ + S G +P++ ++ L++ F
Sbjct: 577 LQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM-SENGKSPNVVTFTSLINGF 635
Query: 498 GKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTK 557
K + A ++ + S+ LK + +Y L+D D+K+A ++ ++ G P
Sbjct: 636 CKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNV 695
Query: 558 EI 559
+
Sbjct: 696 SV 697
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 443 RSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKK 502
RS + ++ +++ A ++A + FE +Q GL PD++ YN LM ++ +
Sbjct: 291 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED-GLEPDVYVYNALMESYSRAGY 349
Query: 503 THEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPT 556
+ A+++F + +G +P+ SY+++VDA+ A +V ++M G PT
Sbjct: 350 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 403
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 21/123 (17%)
Query: 438 LENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAF 497
+E+ SR+ PY G A I+ S+ G PD SYN ++ A+
Sbjct: 341 MESYSRAGYPY-----------GAAEIF----------SLMQHMGCEPDRASYNIMVDAY 379
Query: 498 GKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTK 557
G+ +A VFE + LG+ P KS+ +L+ A+ RDV ++V +M G +P
Sbjct: 380 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 439
Query: 558 EIL 560
+L
Sbjct: 440 FVL 442
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 171/419 (40%), Gaps = 45/419 (10%)
Query: 170 VVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVIGMLFLTDQIDA 229
+ PN +N +L +M GE AEK+L+ M E G +P+ +Y+ ++ + +
Sbjct: 183 IGPNLFIYNSLLGAMRGFGE---AEKILKDMEEEG--IVPNIVTYNTLMVIYMEEGEFLK 237
Query: 230 AFKYIDLTLKSGHVLSMKIFSDCV----RSCVNKGRLDSLVTIIERCKATEKNKALCPSW 285
A +DLT + G + +S + R G L+ V + E+ E + W
Sbjct: 238 ALGILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDW 297
Query: 286 TTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVSALLTAG-RT 344
+ + L ++ + + M +W+VK + VL +++A+ +AG R
Sbjct: 298 EFEF----VKLENFIGRICY---QVMRRWLVKDDNWTTRVLK------LLNAMDSAGVRP 344
Query: 345 YSSELLGASWAVLRHS-----------LRKKKVPNPESYLGRIYALASMGNLQKAFGALY 393
E WA R +R++ S + L MG +K + AL
Sbjct: 345 SREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWL--MGKAKKWWAALE 402
Query: 394 EYESAYGDSNQESEDLFCPFTSLH--PLVVACSKKGFETLD-NVYFQLENLSRSERPYKS 450
YE D E +L H L+ A SK+G + ++E+ + +P +
Sbjct: 403 IYEDLL-DEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMED--KGLKPQRR 459
Query: 451 VAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVF 510
N ++ C+ + A Q F+++ G P + SY L+ A K K EA +V+
Sbjct: 460 --HWNAVLVACSKASETTAAIQIFKAMVDN-GEKPTVISYGALLSALEKGKLYDEAFRVW 516
Query: 511 EHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTKEILKKIRRRCIR 569
H+ +G++PN +Y+ + + +++ +M + G +P+ + C R
Sbjct: 517 NHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCAR 575
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 467 LDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYS 526
LD A ++ +Q GL+PD +Y+ +++ GK A ++F + G PN +++
Sbjct: 445 LDIAMDMYQRMQEA-GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFN 503
Query: 527 VLVDAHLINRDVKSALSVVDDMLAAGFQPTK 557
+++ H R+ ++AL + DM AGFQP K
Sbjct: 504 IMIALHAKARNYETALKLYRDMQNAGFQPDK 534
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 419 LVVACSKKGFETLDNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQ 478
LV AC++ G Y +E +R+E SV ALN + N+ ++DR ++ ++ +
Sbjct: 154 LVRACTQNG--DAQGAYEVIEQ-TRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMD 210
Query: 479 STFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDV 538
S G +++++N ++++F K K EA VF + G+ PN S+++++D D+
Sbjct: 211 S-LGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDM 269
Query: 539 KSALSVVDDM 548
+ AL ++ M
Sbjct: 270 RFALQLLGKM 279
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 451 VAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVF 510
+ N +I G A ++ A + F+ + T G+TP + ++N L++ + K + EA K+
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIET-GITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 511 EHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPT 556
+ + GL P+ SY+ L+DA+ + KS + +M A G PT
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPT 572
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 400 GDSNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAALNCIIS 459
GD +E+E++F + +K + + +Y + N ++ + + S+ S
Sbjct: 222 GDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQS 281
Query: 460 GCA--NIWDLDRAYQTFESIQSTF---GLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLT 514
++ + +Y+ I + PD+ SY L+ A+G+ ++ EA VFE +
Sbjct: 282 TVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEML 341
Query: 515 SLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDM 548
G++P K+Y++L+DA I+ V+ A +V M
Sbjct: 342 DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 451 VAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVF 510
+ N +I G A ++ A + F+ + T G+TP + ++N L++ + K + EA K+
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIET-GITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 511 EHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPT 556
+ + GL P+ SY+ L+DA+ + KS + +M A G PT
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPT 572
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 400 GDSNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAALNCIIS 459
GD +E+E++F + +K + + +Y + N ++ + + S+ S
Sbjct: 229 GDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQS 288
Query: 460 GCA--NIWDLDRAYQTFESIQSTF---GLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLT 514
++ + +Y+ I + PD+ SY L+ A+G+ ++ EA VFE +
Sbjct: 289 TVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEML 348
Query: 515 SLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDM 548
G++P K+Y++L+DA I+ V+ A +V M
Sbjct: 349 DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 354 WAV--LRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQESEDLFC 411
WA+ + LR P+ +Y I A S GN ++A + +++
Sbjct: 196 WAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV----------CKKMTDNGVG 245
Query: 412 PFTSLHPLVVACSKKGFETLDNV-YFQLENLSRSERPYKSVAALNCIISGCANIWDLDRA 470
P H +V++ K G + + YF+L ++ RP N II + + +A
Sbjct: 246 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKV-RP--DTTTFNIIIYCLSKLGQSSQA 302
Query: 471 YQTFESIQSTFG-LTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLV 529
F S++ PD+ ++ +MH + + VFE + + GLKPN SY+ L+
Sbjct: 303 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 362
Query: 530 DAHLINRDVKSALSVVDDMLAAGFQP 555
A+ ++ +ALSV+ D+ G P
Sbjct: 363 GAYAVHGMSGTALSVLGDIKQNGIIP 388
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 106/501 (21%), Positives = 200/501 (39%), Gaps = 71/501 (14%)
Query: 96 DSLELQNLFGEYMASQKWDEVKDLFEAWVRSLDKNGKPNMPDVNLYNHYLRANLMIGASA 155
D + ++ Y + + + +FEA V K P++ YN + A + G S
Sbjct: 319 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK------PNIVSYNALMGAYAVHGMSG 372
Query: 156 AELLDILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYD 215
L +L + ++P+ S+ +L S ++ + A+++ M + + P+ +Y+
Sbjct: 373 TAL-SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK--PNVVTYN 429
Query: 216 LVIGML----FLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIER 271
+I FL + ++ + +K V + + C RS K +D++++ +
Sbjct: 430 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS-KKKVNVDTVLSAAQ- 487
Query: 272 CKATEKNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLS--- 328
+ N A S Y A E +A Y + M K VK + +L+S
Sbjct: 488 SRGINLNTAAYNSAIGSYINAA----ELEKAIALY--QSMRKKKVKADSVTFTILISGSC 541
Query: 329 -----------VDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIY 377
+ E +S LT YSS L S ++ +V ES I+
Sbjct: 542 RMSKYPEAISYLKEMEDLSIPLTK-EVYSSVLCAYS--------KQGQVTEAES----IF 588
Query: 378 ALASMGNLQKAFGALYEYESAYGDSNQ--ESEDLFCPFTS--LHPLVVACS------KKG 427
M + A AY S + ++ +LF + + P +ACS KG
Sbjct: 589 NQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKG 648
Query: 428 FETLDNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQS-----TFG 482
+ NV+ ++ + E P+ I S C + + RA + + + G
Sbjct: 649 GQP-SNVFVLMDLMREKEIPFTGAVFFE-IFSACNTLQEWKRAIDLIQMMDPYLPSLSIG 706
Query: 483 LTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSAL 542
LT N ++H FGK K K+F + + G+ N K+Y++L++ L + + +
Sbjct: 707 LT------NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYI 760
Query: 543 SVVDDMLAAGFQPTKEILKKI 563
V++ M AG QP+ ++ + I
Sbjct: 761 EVLEWMSGAGIQPSNQMYRDI 781
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 354 WAV--LRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQESEDLFC 411
WA+ + LR P+ +Y I A S GN ++A + +++
Sbjct: 64 WAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV----------CKKMTDNGVG 113
Query: 412 PFTSLHPLVVACSKKGFETLDNV-YFQLENLSRSERPYKSVAALNCIISGCANIWDLDRA 470
P H +V++ K G + + YF+L ++ RP N II + + +A
Sbjct: 114 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKV-RP--DTTTFNIIIYCLSKLGQSSQA 170
Query: 471 YQTFESIQSTFG-LTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLV 529
F S++ PD+ ++ +MH + + VFE + + GLKPN SY+ L+
Sbjct: 171 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 230
Query: 530 DAHLINRDVKSALSVVDDMLAAGFQP 555
A+ ++ +ALSV+ D+ G P
Sbjct: 231 GAYAVHGMSGTALSVLGDIKQNGIIP 256
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 106/501 (21%), Positives = 200/501 (39%), Gaps = 71/501 (14%)
Query: 96 DSLELQNLFGEYMASQKWDEVKDLFEAWVRSLDKNGKPNMPDVNLYNHYLRANLMIGASA 155
D + ++ Y + + + +FEA V K P++ YN + A + G S
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK------PNIVSYNALMGAYAVHGMSG 240
Query: 156 AELLDILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYD 215
L +L + ++P+ S+ +L S ++ + A+++ M + + P+ +Y+
Sbjct: 241 TAL-SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK--PNVVTYN 297
Query: 216 LVIGML----FLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIER 271
+I FL + ++ + +K V + + C RS K +D++++ +
Sbjct: 298 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS-KKKVNVDTVLSAAQS 356
Query: 272 CKATEKNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLS--- 328
+ N A S Y A E +A Y + M K VK + +L+S
Sbjct: 357 -RGINLNTAAYNSAIGSYINAA----ELEKAIALY--QSMRKKKVKADSVTFTILISGSC 409
Query: 329 -----------VDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIY 377
+ E +S LT YSS L S ++ +V ES I+
Sbjct: 410 RMSKYPEAISYLKEMEDLSIPLTK-EVYSSVLCAYS--------KQGQVTEAES----IF 456
Query: 378 ALASMGNLQKAFGALYEYESAYGDSNQ--ESEDLFCPFTS--LHPLVVACS------KKG 427
M + A AY S + ++ +LF + + P +ACS KG
Sbjct: 457 NQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKG 516
Query: 428 FETLDNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQS-----TFG 482
+ NV+ ++ + E P+ I S C + + RA + + + G
Sbjct: 517 GQP-SNVFVLMDLMREKEIPFTGAVFFE-IFSACNTLQEWKRAIDLIQMMDPYLPSLSIG 574
Query: 483 LTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSAL 542
LT N ++H FGK K K+F + + G+ N K+Y++L++ L + + +
Sbjct: 575 LT------NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYI 628
Query: 543 SVVDDMLAAGFQPTKEILKKI 563
V++ M AG QP+ ++ + I
Sbjct: 629 EVLEWMSGAGIQPSNQMYRDI 649
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 156/418 (37%), Gaps = 35/418 (8%)
Query: 138 VNLYNHYLRANLMIGASAAELLDILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLL 197
+ YN L + G E+ + +M + V PN ++N ++ + G A + +
Sbjct: 183 IGCYNTLLNSLARFGL-VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYV 241
Query: 198 ERMLESGNESLPDDESYDLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCV 257
+++E+G + PD +Y +I +D+AFK + G + ++ +
Sbjct: 242 SKIVEAGLD--PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC 299
Query: 258 NKGRLDSLVTIIERCKATEKNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVK 317
R+D + + + K E T I + E S+ +L + +
Sbjct: 300 VARRIDEAMDLFVKMKDDE---CFPTVRTYTVLIKSLCGSERKSE----ALNLVKEMEET 352
Query: 318 GERANPPVLLSVDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIY 377
G + N + + L R ELLG L K +PN +Y I
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKAR----ELLG-------QMLEKGLMPNVITYNALIN 401
Query: 378 ALASMGNLQKAFGALYEYESAYGDSNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQ 437
G ++ A + ES N + + L+ K V +
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRT---------YNELIKGYCKSNVHKAMGVLNK 452
Query: 438 LENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAF 497
+ L R P V N +I G + D AY+ S+ + GL PD +Y ++ +
Sbjct: 453 M--LERKVLP--DVVTYNSLIDGQCRSGNFDSAYRLL-SLMNDRGLVPDQWTYTSMIDSL 507
Query: 498 GKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
K K+ EA +F+ L G+ PN Y+ L+D + V A +++ ML+ P
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP 565
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 439 ENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFG 498
E + RS P S+ + +I+G LD A Q FE + S PD+ +YN L+ F
Sbjct: 351 EMVKRSIDP--SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFC 407
Query: 499 KLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
K K+ E +VF ++ GL N +Y++L+ D A + +M++ G P
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 95/465 (20%), Positives = 174/465 (37%), Gaps = 52/465 (11%)
Query: 98 LELQNLFGEYMASQKWDEVKDLFEAWVRSLDKNGKPNMPDVNLYNHYLRANLMIGASAAE 157
+E L K+D V L E + G P+ N Y + + N S
Sbjct: 82 IEFSKLLSAIAKMNKFDVVISLGE----QMQNLGIPH----NHYTYSILINCFCRRSQLP 133
Query: 158 L-LDILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDL 216
L L +L +M PN + + +L + A L+++M +G + P+ +++
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ--PNTVTFNT 191
Query: 217 VIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIERCKATE 276
+I LFL ++ A ID + G + + V +G D ++ + + +
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251
Query: 277 KNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVS 336
+ T + + +D +L + KG R N S+ +S
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDD-------ALNLFKEMETKGIRPNVVTYSSL-----IS 299
Query: 337 ALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYE 396
L GR + L L + +K P+ ++ I A G L +A E
Sbjct: 300 CLCNYGRWSDASRL------LSDMIERKINPDVFTFSALIDAFVKEGKLVEA-------E 346
Query: 397 SAYGDSNQESEDLFCPFTSLHPLVVACSK--KGF---ETLDNVYFQLENLSRSERPYKSV 451
Y + + S D P +V S GF + LD Q+ S+ + V
Sbjct: 347 KLYDEMVKRSID---------PSIVTYSSLINGFCMHDRLDEAK-QMFEFMVSKHCFPDV 396
Query: 452 AALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFE 511
N +I G ++ + F + S GL + +YN L+ + A ++F+
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREM-SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 512 HLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPT 556
+ S G+ PN +Y+ L+D N ++ A+ V + + + +PT
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 4/149 (2%)
Query: 428 FETLDNVYFQLENL-SRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPD 486
+ LD LE + ++S P +I G DLD AY F ++ + ++
Sbjct: 544 YRKLDEALGLLEEMKNKSVNP--DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 601
Query: 487 IHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVD 546
+YN ++HAF + A K+F+ + L P+ +Y ++VD +V +
Sbjct: 602 TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLL 661
Query: 547 DMLAAGFQPTKEILKK-IRRRCIREMDYE 574
+M+ GF P+ L + I C+ + YE
Sbjct: 662 EMMENGFIPSLTTLGRVINCLCVEDRVYE 690
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 467 LDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYS 526
+++A + F ++ G TP++ +Y L+HA+ K KK A+++FE + S G PN +YS
Sbjct: 534 IEQARKWFNEMREV-GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 527 VLVDAHLINRDVKSALSVVDDMLAAGFQP 555
L+D H V+ A + + M + P
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVP 621
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 182/458 (39%), Gaps = 56/458 (12%)
Query: 132 KPNMPDVNLYNHYLRANLMIGASAAELLD----ILAQMDDFNVVPNTASFNLVLKSMHQA 187
K DV LYN + G SA++ D + MD NV P+ + +++ ++ +A
Sbjct: 267 KEEFRDVRLYNAAIS-----GLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKA 321
Query: 188 GETFAAE--KLLERMLESGNESLPDDESYDLVIGML--FLTDQIDAAFKYIDLTLKSGHV 243
G + A E ++ E+M E G + S D+ G++ F + + I ++ +
Sbjct: 322 GRS-AKEVWEIFEKMSEKGVKW-----SQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGI 375
Query: 244 LSMKIFSDCVRSCVNKGRLDSLVTIIERCKATEKNKALCPSWTTCYFIAEIALREDNSKL 303
S I + + NK + + +E ++K L PS T + + R +
Sbjct: 376 RSNTIVYNTLMDAYNKS---NHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDI 432
Query: 304 AFYSLEFMAKWMVKGERANPPVLLSVDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRK 363
L M ++ + L+S GRT + A LR
Sbjct: 433 VETLLREMEDLGLEPNVKSYTCLISA-----------YGRTKKMSDMAAD-----AFLRM 476
Query: 364 KKV---PNPESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQESEDLFCPFTSLHPLV 420
KKV P+ SY I+A + G +KA+ + E ++ P + V
Sbjct: 477 KKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM----------CKEGIKPSVETYTSV 526
Query: 421 VACSKKGFETLDNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQST 480
+ ++ +T ++ L E+ + N ++ G A A S
Sbjct: 527 LDAFRRSGDT--GKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEF-SK 583
Query: 481 FGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKS 540
GL P + +YN LM+A+ + + + ++ + + +L LKP++ +YS ++ A + RD K
Sbjct: 584 MGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKR 643
Query: 541 ALSVVDDMLAAGFQPTKEILKKIRRRCIREMDYETNDR 578
A M+ +G P +K+ R I E +T +R
Sbjct: 644 AFFYHKMMVKSGQVPDPRSYEKL--RAILEDKAKTKNR 679
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 455 NCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLT 514
N +I+G L A + +++ GL P++ ++N L+H F + K EASKVF +
Sbjct: 277 NTLIAGHCEKGLLSSALK-LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 515 SLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQ 554
++ + PN +Y+ L++ + D + A +DM+ G Q
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQ 375
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 414 TSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAALNC---------IISGCANI 464
+ L P VV F TL + + + L + + + + A+N +I+G +
Sbjct: 302 SGLQPNVVT-----FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 465 WDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKS 524
D + A++ +E + G+ DI +YN L+ K KT +A++ + L L PN+ +
Sbjct: 357 GDHEMAFRFYEDMVCN-GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSST 415
Query: 525 YSVLVDAHLINRDVKSALSVVDDMLAAGFQPTKEILKKIRRRCIREMDYE 574
+S L+ + ++ + M+ +G P ++ + R D++
Sbjct: 416 FSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFD 465
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 455 NCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLT 514
N +I+G L A + +++ GL P++ ++N L+H F + K EASKVF +
Sbjct: 277 NTLIAGHCEKGLLSSALK-LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 515 SLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQ 554
++ + PN +Y+ L++ + D + A +DM+ G Q
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQ 375
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 414 TSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAALNC---------IISGCANI 464
+ L P VV F TL + + + L + + + + A+N +I+G +
Sbjct: 302 SGLQPNVVT-----FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 465 WDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKS 524
D + A++ +E + G+ DI +YN L+ K KT +A++ + L L PN+ +
Sbjct: 357 GDHEMAFRFYEDMVCN-GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSST 415
Query: 525 YSVLVDAHLINRDVKSALSVVDDMLAAGFQPTKEILKKIRRRCIREMDYE 574
+S L+ + ++ + M+ +G P ++ + R D++
Sbjct: 416 FSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFD 465
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 440 NLSRSERPYK---SVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHA 496
NLSR + + V +I I DL A + F+ + + G+ PD Y L+
Sbjct: 747 NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIES-GVDPDAAPYTALIAC 805
Query: 497 FGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPT 556
K+ EA +F+ + G+KP+ Y+ L+ N V A+ +V +ML G +PT
Sbjct: 806 CCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Query: 557 KEILKKI 563
K L +
Sbjct: 866 KASLSAV 872
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 354 WAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQESEDLFCPF 413
W + + K V + S+ I G ++K+F L E +E F P
Sbjct: 148 WWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIEL----------TEFGFSPN 197
Query: 414 TSLHP-LVVACSKKG-FETLDNVYFQLENLS--RSERPYKSVAALNCIISGCANIWDLDR 469
++ L+ C KKG E +++F++ L +ER Y +I+G +
Sbjct: 198 VVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTY------TVLINGLFKNGVKKQ 251
Query: 470 AYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLV 529
++ +E +Q G+ P++++YN +M+ K +T +A +VF+ + G+ N +Y+ L+
Sbjct: 252 GFEMYEKMQED-GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
Query: 530 DAHLINRDVKSALSVVDDMLAAGFQP 555
+ A VVD M + G P
Sbjct: 311 GGLCREMKLNEANKVVDQMKSDGINP 336
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 436 FQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMH 495
FQ+ + R ++ N +I G L+ A + + ++S G+ P++ +YN L+
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-GINPNLITYNTLID 346
Query: 496 AFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
F + K +A + L S GL P+ +Y++LV D A +V +M G +P
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Query: 556 TK 557
+K
Sbjct: 407 SK 408
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 450 SVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKV 509
+V +I+G ++D A + E ++S G+ P++ +Y+ LM K ++ +A ++
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYLEEMKSK-GIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 510 FEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTKEILKKI 563
FE + + G +PN +Y+ L+ + ++ A+ ++D M G +P + K+
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKV 338
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 454 LNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHL 513
N +I G + ++A + + S FG PDI +YN L+ F K + ++AS++F+ +
Sbjct: 209 FNILIRGLCGVGKAEKALELL-GVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 514 TSLGL-KPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPT 556
S + P+ +Y+ ++ + ++ A S++DDML G PT
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPT 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 55/105 (52%)
Query: 451 VAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVF 510
+ N +I G +L++A + F+ ++S +PD+ +Y ++ + K K EAS +
Sbjct: 241 IVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLL 300
Query: 511 EHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
+ + LG+ P +++VLVD + ++ +A + M++ G P
Sbjct: 301 DDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP 345
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 454 LNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHL 513
N +I G + ++A + + S FG PDI +YN L+ F K + ++AS++F+ +
Sbjct: 209 FNILIRGLCGVGKAEKALELL-GVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 514 TSLGL-KPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPT 556
S + P+ +Y+ ++ + ++ A S++DDML G PT
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPT 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 55/105 (52%)
Query: 451 VAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVF 510
+ N +I G +L++A + F+ ++S +PD+ +Y ++ + K K EAS +
Sbjct: 241 IVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLL 300
Query: 511 EHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
+ + LG+ P +++VLVD + ++ +A + M++ G P
Sbjct: 301 DDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP 345
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 160/401 (39%), Gaps = 35/401 (8%)
Query: 155 AAELLDILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESY 214
A ++ D++++ + PN+ S+++++ + + G A L ++M E G + P +Y
Sbjct: 249 ALKVFDVMSK--EVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ--PSTRTY 304
Query: 215 DLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIERCKA 274
++I L ID AF D + G ++ ++ + G+++ + C+
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV---CRK 361
Query: 275 TEKNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLV 334
K++ PS T + ++ AF L M K RA P + + +E +
Sbjct: 362 MVKDRIF-PSVITYNALINGYCKDGRVVPAFELLTVMEK------RACKPNVRTFNE--L 412
Query: 335 VSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYE 394
+ L G+ Y + L L+ L P+ SY I L G++ A+ L
Sbjct: 413 MEGLCRVGKPYKAVHL------LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL-- 464
Query: 395 YESAYGDSNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAAL 454
S+ D+ + ++ A K+G + + + L + R V
Sbjct: 465 -------SSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL--MLRKGISLDEVTGT 515
Query: 455 NCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLT 514
+I G + A E++ LT HS N ++ K K E + +
Sbjct: 516 T-LIDGVCKVGKTRDALFILETLVKMRILTTP-HSLNVILDMLSKGCKVKEELAMLGKIN 573
Query: 515 SLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
LGL P+ +Y+ LVD + + D+ + +++ M +G P
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 173/457 (37%), Gaps = 52/457 (11%)
Query: 98 LELQNLFGEYMASQKWDEVKDLFEAWVRSLDKNGKPNMPDVNLYNHYLRANLMIGASAAE 157
+E L +K+D V L E R +G LY + + N S
Sbjct: 86 VEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHG--------LYTYNILINCFCRRSQIS 137
Query: 158 L-LDILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDL 216
L L +L +M P+ + + +L A L+++M+E G PD ++
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR--PDTITFTT 195
Query: 217 VIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIERCKATE 276
+I LFL ++ A +D ++ G ++ + V +G D + ++ + +A +
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 277 KNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVS 336
+ T + + +D +L + KG R N S+ +S
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDD-------ALNLFKEMETKGIRPNVVTYSSL-----IS 303
Query: 337 ALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYE 396
L + GR + L L + KK PN ++ I A G +A E
Sbjct: 304 CLCSYGRWSDASQL------LSDMIEKKINPNLVTFNALIDAFVKEGKFVEA-------E 350
Query: 397 SAYGDSNQES--EDLFCPFTSLHPLVVACSKKGF---ETLDNVYFQLENLSRSERPYKSV 451
Y D + S D+F + + LV GF + LD Q+ S+ + V
Sbjct: 351 KLYDDMIKRSIDPDIF----TYNSLV-----NGFCMHDRLDKAK-QMFEFMVSKDCFPDV 400
Query: 452 AALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFE 511
N +I G ++ + F + S GL D +Y L+ A KVF+
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 512 HLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDM 548
+ S G+ P+ +YS+L+D N ++ AL V D M
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 454 LNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEH- 512
N II+ + +LD+A + FE ++ + G P ++N L+ +GK+ K E+S++ +
Sbjct: 392 FNAIINASSESGNLDQAMKIFEKMKES-GCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 450
Query: 513 LTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
L L+PN ++ ++LV A R ++ A ++V M + G +P
Sbjct: 451 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKP 493
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/459 (19%), Positives = 183/459 (39%), Gaps = 57/459 (12%)
Query: 112 KWDEVKDLFEAWVRSLDKNGKPNMPDVNLYNHYLRANLMIGASAAEL-LDILAQMDDFNV 170
K D+ DLF ++S +P +P V +N A + EL L + QM+ +
Sbjct: 68 KADDAVDLFRDMIQS-----RP-LPTVIDFNRLFSA--IAKTKQYELVLALCKQMESKGI 119
Query: 171 VPNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVIGMLFLTDQIDAA 230
+ + ++++ + + A + ++++ G E PD ++ ++ L L ++ A
Sbjct: 120 AHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYE--PDTVIFNTLLNGLCLECRVSEA 177
Query: 231 FKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIERCKATEKNKALCPSWTTCYF 290
+ +D ++ GH ++ + V G++ V +I+R T P+ T
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET----GFQPNEVTYGP 233
Query: 291 IAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLL-------SVDEG------LVVSA 337
+ + + + LA L M + +K + +++ S+D + +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 338 LLTAGRTYSSELLG----ASW----AVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAF 389
TY++ + G W +LR +++K PN ++ I + G L++A
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 390 GALYEYESAYGDSNQESE----DLFCPFTSLHPLVVACSKKGFETLDNVYFQLENLSRSE 445
L E N + D FC L + Q+ +L S+
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI----------------QMVDLMISK 397
Query: 446 RPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHE 505
+ N +I+G +D + F + S G+ + +YN L+ F + K
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREM-SLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 506 ASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSV 544
A K+F+ + S ++P+ SY +L+D N +++ AL +
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 451 VAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVF 510
+ N II G N +D A+ F S+ G+ PD+ +YN ++ K EA +F
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 511 EHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTKEILKKI 563
+ G PN +Y++L+ AHL D + +++++ GF +K +
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMV 603
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 450 SVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKV 509
++ + N +I G + D A++ F+++ T G+TP+ +YN L+ F K K + K+
Sbjct: 387 TMLSCNTMIKGFCSHGKSDEAFEIFKNMSET-GVTPNAITYNALIKGFCKENKVEKGLKL 445
Query: 510 FEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSV 544
++ L +LGLKP+ +Y+ LV ++ V ++L++
Sbjct: 446 YKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 92/473 (19%), Positives = 184/473 (38%), Gaps = 73/473 (15%)
Query: 120 FEAWVRSLDKNGKPNMPDVNLYNHYLRANLMIGASAAELLDILAQMDDFNVVPNTASFN- 178
F+ + D K PDV L+ + A G E + + ++M++ V PN +FN
Sbjct: 242 FQKCCEAFDVVCKGVSPDVYLFTTAINA-FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNT 300
Query: 179 ----------------------------------LVLKSMHQAGETFAAEKLLERMLESG 204
+++K + +A A +L+ M + G
Sbjct: 301 VIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG 360
Query: 205 NESLPDDESYDLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDS 264
P+ Y+ +I ++ A + DL + G L+ ++ ++ G+ D+
Sbjct: 361 FP--PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 418
Query: 265 LVTIIERCKATEKNKALCPSWTTCYFIAEIALREDNSKLAFYS-LEFMAKWMVKGERANP 323
+++ + N F + I L S L F S L F+ + +++
Sbjct: 419 AERLLKEMLSIGFN------VNQGSFTSVICLL--CSHLMFDSALRFVGEMLLRNMSPGG 470
Query: 324 PVLLSVDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMG 383
+L ++ +S L G+ + L W L K V + + ++ L G
Sbjct: 471 GLLTTL-----ISGLCKHGKHSKALEL---WF---QFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 384 NLQKAFGALYEYESAYGDSNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQL-ENLS 442
L +AF E ++ S + L+ C K + LD + L E +
Sbjct: 520 KLDEAFRIQKEILGRGCVMDR---------VSYNTLISGCCGK--KKLDEAFMFLDEMVK 568
Query: 443 RSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKK 502
R +P ++ +I G N+ ++ A Q ++ + G+ PD+++Y+ ++ K ++
Sbjct: 569 RGLKPDNYTYSI--LICGLFNMNKVEEAIQFWDDCKRN-GMLPDVYTYSVMIDGCCKAER 625
Query: 503 THEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
T E + F+ + S ++PN Y+ L+ A+ + + AL + +DM G P
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 92/473 (19%), Positives = 184/473 (38%), Gaps = 73/473 (15%)
Query: 120 FEAWVRSLDKNGKPNMPDVNLYNHYLRANLMIGASAAELLDILAQMDDFNVVPNTASFN- 178
F+ + D K PDV L+ + A G E + + ++M++ V PN +FN
Sbjct: 242 FQKCCEAFDVVCKGVSPDVYLFTTAINA-FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNT 300
Query: 179 ----------------------------------LVLKSMHQAGETFAAEKLLERMLESG 204
+++K + +A A +L+ M + G
Sbjct: 301 VIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG 360
Query: 205 NESLPDDESYDLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDS 264
P+ Y+ +I ++ A + DL + G L+ ++ ++ G+ D+
Sbjct: 361 FP--PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 418
Query: 265 LVTIIERCKATEKNKALCPSWTTCYFIAEIALREDNSKLAFYS-LEFMAKWMVKGERANP 323
+++ + N F + I L S L F S L F+ + +++
Sbjct: 419 AERLLKEMLSIGFN------VNQGSFTSVICLL--CSHLMFDSALRFVGEMLLRNMSPGG 470
Query: 324 PVLLSVDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPESYLGRIYALASMG 383
+L ++ +S L G+ + L W L K V + + ++ L G
Sbjct: 471 GLLTTL-----ISGLCKHGKHSKALEL---WF---QFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 384 NLQKAFGALYEYESAYGDSNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYFQL-ENLS 442
L +AF E ++ S + L+ C K + LD + L E +
Sbjct: 520 KLDEAFRIQKEILGRGCVMDR---------VSYNTLISGCCGK--KKLDEAFMFLDEMVK 568
Query: 443 RSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKK 502
R +P ++ +I G N+ ++ A Q ++ + G+ PD+++Y+ ++ K ++
Sbjct: 569 RGLKPDNYTYSI--LICGLFNMNKVEEAIQFWDDCKRN-GMLPDVYTYSVMIDGCCKAER 625
Query: 503 THEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
T E + F+ + S ++PN Y+ L+ A+ + + AL + +DM G P
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 89/447 (19%), Positives = 181/447 (40%), Gaps = 60/447 (13%)
Query: 112 KWDEVKDLFEAWVRSLDKNGKPNMPDVNLYNHYLRANLMIGASAAELLDILAQMDDFNVV 171
K D+ LF+ +RS +P +P + ++ + A + +LD Q++ +
Sbjct: 68 KKDDAIALFQEMIRS-----RP-LPSLVDFSRFFSA-IARTKQFNLVLDFCKQLELNGIA 120
Query: 172 PNTASFNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVIGMLFLTDQIDAAF 231
N + N+++ + +T A +L ++++ G E PD +++ +I LFL ++ A
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE--PDTTTFNTLIKGLFLEGKVSEAV 178
Query: 232 KYIDLTLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIERCKATEKN-KALCPSWTTCYF 290
+D +++G + ++ V G + ++ K E+N KA +++T
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLR--KMEERNVKADVFTYST--- 233
Query: 291 IAEIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVSALLTAGRTYSSELL 350
I + R+ A + M +K V +V L AG+ LL
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSS--------VVTYNSLVRGLCKAGKWNDGALL 285
Query: 351 GASWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQESEDLF 410
L+ + ++ VPN ++ + G LQ+A LY+ G
Sbjct: 286 ------LKDMVSREIVPNVITFNVLLDVFVKEGKLQEA-NELYKEMITRG---------- 328
Query: 411 CPFTSLHPLVVACSKKGFETLDNVYFQLENLSRS---------ERPYKSVAALNCIISGC 461
+ P ++ + TL + Y LS + + + +I G
Sbjct: 329 -----ISPNIIT-----YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 462 ANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPN 521
+ +D + F +I S GL + +Y+ L+ F + K A ++F+ + S G+ P+
Sbjct: 379 CMVKRVDDGMKVFRNI-SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 522 AKSYSVLVDAHLINRDVKSALSVVDDM 548
+Y +L+D N ++ AL + +D+
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDL 464
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 467 LDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYS 526
L+ A + FE ++ T G++PD ++N +++ F + KK EA K+F + + P+ SY+
Sbjct: 271 LETALRFFEDMK-TRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYT 329
Query: 527 VLVDAHLINRDVKSALSVVDDMLAAGFQP 555
++ +L V L + ++M ++G +P
Sbjct: 330 TMIKGYLAVDRVDDGLRIFEEMRSSGIEP 358
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 436 FQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMH 495
F + L R P ++ L+ ++ GC A + + FGL P++ +YN L+
Sbjct: 303 FLTQMLKRGCHP--NIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQ 360
Query: 496 AFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
F +A VF H+ +G PN ++Y L++ + A+ + + ML +G P
Sbjct: 361 GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP 420
Query: 556 TKEILKKIRRRCIREMDY-ETNDRLELLARD 585
+ + R + E +E+++++
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKE 451
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 152/386 (39%), Gaps = 49/386 (12%)
Query: 177 FNLVLKSMHQAGETFAAEKLLERMLESGNESLPDDESYDLVIGMLFLTDQIDAAFKYIDL 236
F V+ Q G A ++ R+ E G + P + Y+ V+ L ++I +
Sbjct: 114 FISVISVYRQVGLAERAVEMFYRIKEFGCD--PSVKIYNHVLDTLLGENRIQMIYMVYRD 171
Query: 237 TLKSGHVLSMKIFSDCVRSCVNKGRLDSLVTIIERCKATEKNKALCP---SWTTCYF-IA 292
+ G ++ ++ +++ ++D ++ NK CP S+TT +
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLL----VEMSNKGCCPDAVSYTTVISSMC 227
Query: 293 EIALREDNSKLAFYSLEFMAKWMVKGERANPPVLLSVDEGLVVSALLTAGRTYSSELLGA 352
E+ L ++ +LA ER P V SV L+ G + GA
Sbjct: 228 EVGLVKEGRELA--------------ERFEPVV--SVYNALI------NGLCKEHDYKGA 265
Query: 353 SWAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYESAYGDSNQESEDLFCP 412
+ ++R + K PN SY I L + G ++ AF L + N
Sbjct: 266 -FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPN--------- 315
Query: 413 FTSLHPLVVACSKKG--FETLDNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRA 470
+L LV C +G F+ LD + R +V A N ++ G + ++ +A
Sbjct: 316 IYTLSSLVKGCFLRGTTFDALD----LWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 471 YQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVD 530
F ++ G +P+I +Y L++ F K A ++ + + G PN Y+ +V+
Sbjct: 372 VSVFSHMEE-IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 531 AHLINRDVKSALSVVDDMLAAGFQPT 556
A + K A S+++ M P+
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPS 456
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 165/421 (39%), Gaps = 54/421 (12%)
Query: 139 NLYNHYLRANLMIGASAAEL-LDILAQMDDFNVVPNTASFNLVLKSMHQAGETFAAEKLL 197
NLY + + N S L L +L +M P+ + + +L A L+
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 198 ERMLESGNESLPDDESYDLVIGMLFLTDQIDAAFKYIDLTLKSGHVLSMKIFSDCVRSCV 257
++M+E G PD ++ +I LFL ++ A +D ++ G ++ + V
Sbjct: 104 DQMVEMGYR--PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161
Query: 258 NKGRLDSLVTIIERCKATEKNKALCPSWTTCYFIAEIALREDNSKLAFYSLEFMAKWMVK 317
+G +D ++ + +A + + T + + +D +L + K
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD-------ALNLFKEMETK 214
Query: 318 GERANPPVLLSVDEGLVVSALLTAGR-TYSSELLGASWAVLRHSLRKKKVPNPESYLGRI 376
G R N S+ +S L + GR + +S+LL + KK PN ++ I
Sbjct: 215 GIRPNVVTYSSL-----ISCLCSYGRWSDASQLLS-------DMIEKKINPNLVTFNALI 262
Query: 377 YALASMGNLQKAFGALYEYESAYGDSNQESEDLFCPFTSLHPLVVACSKKGFETLDNVYF 436
A G +A E + D + S D P + + +L N +
Sbjct: 263 DAFVKEGKFVEA-------EKLHDDMIKRSID---------PDIFT-----YNSLINGFC 301
Query: 437 QLENLSRSERPYKSVAALNC---------IISGCANIWDLDRAYQTFESIQSTFGLTPDI 487
+ L ++++ ++ + + +C +I G ++ + F + S GL D
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDT 360
Query: 488 HSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDD 547
+Y L+ A KVF+ + S G+ P+ +YS+L+D N ++ AL V D
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 548 M 548
M
Sbjct: 421 M 421
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 482 GLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSA 541
GL PDI ++N ++ + +K +A K+F + S G PN +SY++++ +++A
Sbjct: 328 GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 542 LSVVDDMLAAGFQP 555
+ DDM+ +G QP
Sbjct: 388 IEYFDDMVDSGLQP 401
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 446 RPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHE 505
RP+ S+ N ++S A + + E +Q T G++ D+++Y+ ++ F + +
Sbjct: 78 RPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ-TLGISHDLYTYSIFINCFCRRSQLSL 136
Query: 506 ASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
A V + LG +P+ + S L++ + ++ + A+++VD M+ G++P
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 446 RPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHE 505
RP+ S+ N ++S A + + E +Q T G++ D+++Y+ ++ F + +
Sbjct: 78 RPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ-TLGISHDLYTYSIFINCFCRRSQLSL 136
Query: 506 ASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
A V + LG +P+ + S L++ + ++ + A+++VD M+ G++P
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 451 VAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVF 510
V N +ISG A L+R Q F+ + + GL+PD+ SYN LM + KL + EA K+
Sbjct: 83 VTTYNSLISGAAKNLMLNRVLQLFDEMLHS-GLSPDMWSYNTLMSCYFKLGRHGEAFKIL 141
Query: 511 -EHLTSLGLKPNAKSYSVLVDA 531
E + GL P +Y++L+DA
Sbjct: 142 HEDIHLAGLVPGIDTYNILLDA 163
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 439 ENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFG 498
E RS +P +V + N +I+G + +LD ++ ++ + PD+ +Y+ L++A
Sbjct: 265 EITKRSLQP--TVVSFNTLINGYCKVGNLDEGFRLKHQMEKS-RTRPDVFTYSALINALC 321
Query: 499 KLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
K K A +F+ + GL PN ++ L+ H N ++ ML+ G QP
Sbjct: 322 KENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQP 378
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 15/170 (8%)
Query: 415 SLHPLVVACSKKGFETLDNVY---------FQLENLSRSERPYKSVAALNCIISGCANIW 465
SL P VV+ F TL N Y F+L++ R V + +I+
Sbjct: 270 SLQPTVVS-----FNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKEN 324
Query: 466 DLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSY 525
+D A+ F+ + GL P+ + L+H + + + ++ + S GL+P+ Y
Sbjct: 325 KMDGAHGLFDEMCKR-GLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLY 383
Query: 526 SVLVDAHLINRDVKSALSVVDDMLAAGFQPTKEILKKIRRRCIREMDYET 575
+ LV+ N D+ +A ++VD M+ G +P K + R D ET
Sbjct: 384 NTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVET 433
>AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16983638-16986681 FORWARD
LENGTH=444
Length = 444
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 474 FESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHL 533
F G+ PD++ YN L+ GK K EA +V++ + +KPN +++ L++A
Sbjct: 98 FREEMKAMGIAPDVNLYNFLISTCGKCKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNACA 157
Query: 534 INRDVKSALSVVDDMLAAG 552
++ + ++V DM AAG
Sbjct: 158 VSGQLDLVYAIVRDMTAAG 176
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Query: 413 FTSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQ 472
S + L+ A K G T N+ +L ++ R+ N ++S C+ +LD A +
Sbjct: 260 LISFNTLINARLKSGGLT-PNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVK 318
Query: 473 TFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAH 532
FE +++ PD+ +YN ++ +G+ EA ++F L G P+A +Y+ L+ A
Sbjct: 319 VFEDMEA-HRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAF 377
Query: 533 LINRDVKSALSVVDDMLAAGF 553
R+ + V M GF
Sbjct: 378 ARERNTEKVKEVYQQMQKMGF 398
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 8/133 (6%)
Query: 425 KKGFETLDNVYFQLENLS--RSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFG 482
++ E + VY Q++ + + E Y N II LD A Q ++ ++ G
Sbjct: 380 ERNTEKVKEVYQQMQKMGFGKDEMTY------NTIIHMYGKQGQLDLALQLYKDMKGLSG 433
Query: 483 LTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSAL 542
PD +Y L+ + GK +T EA+ + + +G+KP ++YS L+ + + A
Sbjct: 434 RNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAE 493
Query: 543 SVVDDMLAAGFQP 555
ML +G +P
Sbjct: 494 DTFSCMLRSGTKP 506
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 15/157 (9%)
Query: 409 LFCPFTSLHPL---------VVACSK-KGFETLDNVYFQLENLSRSERPYKSVAALNCII 458
LFC HPL ++A +K +E + +++ LE L S Y ++C
Sbjct: 66 LFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFC 125
Query: 459 SGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGL 518
CA L A + G P I ++ L++ F + + +EA + + + LG
Sbjct: 126 R-CAR---LSLALSCLGKMMK-LGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 519 KPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
+PN Y+ ++D+ V +AL V+ M G +P
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRP 217
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 457 IISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSL 516
+I + D +A F ++ + G+TPD+ +YN +++ +GK K EA + + +
Sbjct: 231 LIELSRRLCDYSKAISIFSRLKRS-GITPDLVAYNSMINVYGKAKLFREARLLIKEMNEA 289
Query: 517 GLKPNAKSYSVLVDAHLINRDVKSALSVVDDM 548
G+ PN SYS L+ ++ N ALSV +M
Sbjct: 290 GVLPNTVSYSTLLSVYVENHKFLEALSVFAEM 321
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 415 SLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTF 474
S PL++A K+ + D Y E + R +P +V N +I+ +++A
Sbjct: 190 SCKPLMIALLKEN-RSADVEYVYKEMIRRKIQP--NVFTFNVVINALCKTGKMNKARDVM 246
Query: 475 ESIQSTFGLTPDIHSYNGLMHAFGKLK---KTHEASKVFEHLTSLGLKPNAKSYSVLVDA 531
E ++ +G +P++ SYN L+ + KL K ++A V + + + PN ++++L+D
Sbjct: 247 EDMK-VYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG 305
Query: 532 HLINRDVKSALSVVDDMLAAGFQPT 556
+ ++ ++ V +ML +P
Sbjct: 306 FWKDDNLPGSMKVFKEMLDQDVKPN 330
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 450 SVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKV 509
++ A N ++S ++ +A + FE+++ F TPD +Y+ L+ +GK +A +V
Sbjct: 202 NLVAFNGLLSALCKSKNVRKAQEVFENMRDRF--TPDSKTYSILLEGWGKEPNLPKAREV 259
Query: 510 FEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPT 556
F + G P+ +YS++VD V AL +V M + +PT
Sbjct: 260 FREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPT 306
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 453 ALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEH 512
A N ++ D+D Y+ F+ + GL PD +S+ +HA+ H A KV +
Sbjct: 245 AYNALLDALCKSGDVDGGYKMFQEM-GNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDR 303
Query: 513 LTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
+ L PN +++ ++ N V A ++D+M+ G P
Sbjct: 304 MKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANP 346
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 450 SVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKV 509
S + ++ G A I D A + F+ + D+ +YN L+ A K K+
Sbjct: 207 SAKTYSILVRGWARIRDASGARKVFDEMLER-NCVVDLLAYNALLDALCKSGDVDGGYKM 265
Query: 510 FEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDM 548
F+ + +LGLKP+A S+++ + A+ DV SA V+D M
Sbjct: 266 FQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRM 304
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 439 ENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFG 498
+ + +S+ + V A N +I G ++ + F + S GL + +Y L+H F
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM-SQRGLVGNTVTYTTLIHGFF 402
Query: 499 KLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDM 548
+ + A VF+ + S G+ P+ +Y++L+D N +V++AL V + M
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 452 AALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFE 511
N +I+G +++RA + + ++ G P++++Y+ LM+ F K+ K EA + F+
Sbjct: 269 VTFNVMINGFCRAGEVERAKKILDFMKKN-GCNPNVYNYSALMNGFCKVGKIQEAKQTFD 327
Query: 512 HLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAA 551
+ GLK + Y+ L++ N + A+ ++ +M A+
Sbjct: 328 EVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKAS 367
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 450 SVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKV 509
++ A N +I+G I+ ++ A F + GL PD SY ++ +G+ EA
Sbjct: 348 NIIAYNTLITGYGKIFKMEAAQGLFHRL-CNIGLEPDETSYRSMIEGWGRADNYEEAKHY 406
Query: 510 FEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQ 554
++ L G KPN+ + L++ D A+ ++DM G Q
Sbjct: 407 YQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQ 451
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 413 FTSLHPLVVACSKKGFETLDNVYFQLENLSRSERPY------------KSVAALNCIISG 460
F + L +A + + TL ++Y ++ RSE K V N ++ G
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKV---GRSEEALDILREMASVGIKKDVVTYNALLGG 488
Query: 461 CANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKP 520
D + F ++ L P++ +Y+ L+ + K EA ++F S GL+
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVL-PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA 547
Query: 521 NAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
+ YS L+DA N V SA+S++D+M G P
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 440 NLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGK 499
+L S+ + V N +I+G ++ + F + GL D +YN L+H + +
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFTYNTLIHGYCQ 371
Query: 500 LKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDM 548
K + A KVF + G+ P+ +Y++L+D N ++ AL +V+D+
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%)
Query: 449 KSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASK 508
++V + N ++S N LD A +TF+ + G+TPD+ +YN ++ A + +
Sbjct: 155 RTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILS 214
Query: 509 VFEHLTSLGLKPNAKSYSVLVD 530
+FE L G +P+ S++ L++
Sbjct: 215 IFEELEKNGFEPDLISFNTLLE 236
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 453 ALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEH 512
A + +IS + A F+S++ F PD+ Y L+ + + + EA KVF+
Sbjct: 223 AFSIVISNLSRKRRASEAQSFFDSLKDRF--EPDVIVYTNLVRGWCRAGEISEAEKVFKE 280
Query: 513 LTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQP 555
+ G++PN +YS+++DA + A V DML +G P
Sbjct: 281 MKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAP 323
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 451 VAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVF 510
+ N II G N +D A+ F S+ G+ P + +YN ++ K EA +F
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPGVKTYNIMIGGLCKKGPLSEAELLF 566
Query: 511 EHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTKEILKKI 563
+ G P+ +Y++L+ AHL + D ++ +++++ GF +K +
Sbjct: 567 RKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 467 LDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYS 526
L +A++ F+S G+ P+ SYN LM AF A ++F + + P+ SY
Sbjct: 171 LQKAFELFKS-SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYK 229
Query: 527 VLVDAHLINRDVKSALSVVDDMLAAGFQPTKEIL 560
+L+ V A+ ++DDML GF P + ++
Sbjct: 230 ILIQGFCRKGQVNGAMELLDDMLNKGFVPDRTLI 263
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 174/429 (40%), Gaps = 50/429 (11%)
Query: 136 PDVNLYNHYLRANLMIGASAAELLDILAQ-MDDFNVVPNTASFNLVLKSMHQAGETFAAE 194
PDV +N + N++ + E L Q M+ P ++N VL + G AA
Sbjct: 231 PDVATFN--ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 288
Query: 195 KLLERMLESGNESLPDDESYDLVIGMLFLTDQIDAAFKYI-DLTLKSGHVLSMKIFSDCV 253
+LL+ M G ++ D +Y+++I L +++I + + D+ + H + ++ +
Sbjct: 289 ELLDHMKSKGVDA--DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT-YNTLI 345
Query: 254 RSCVNKGRLDSLVTIIERCKATEKNKALCPSWTTCYFIAEIALREDNSKLA---FYSLEF 310
N+G+ V I + + L P+ T + + + E N K A FY +E
Sbjct: 346 NGFSNEGK----VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME- 400
Query: 311 MAKWMVKGERANPPVLLSVDEGLVVSALLTAGRTYSSELLGASWAVLRHSLRKKKVPNPE 370
AK + E + +L +GL +A R + + V R
Sbjct: 401 -AKGLTPSEVSYGVLL----DGLCKNAEFDLARGFYMRMKRNGVCVGR-----------I 444
Query: 371 SYLGRIYALASMGNLQKAFGALYEYESAYGDSNQESEDLFCP-FTSLHPLVVACSKKG-F 428
+Y G I L G L +A L N+ S+D P + L+ K G F
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLL----------NEMSKDGIDPDIVTYSALINGFCKVGRF 494
Query: 429 ETLDNVYFQLENLSRSERPY-KSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDI 487
+T + ++ + S S NC GC L A + +E++ G T D
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC-----LKEAIRIYEAMILE-GHTRDH 548
Query: 488 HSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDD 547
++N L+ + K K EA + +TS G+ PN S+ L++ + + + A SV D+
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Query: 548 MLAAGFQPT 556
M G PT
Sbjct: 609 MTKVGHHPT 617
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 354 WAVLRHSLRKKKVPNPESYLGRIYALASMGNLQKAFGALYEYE-SAYGDSNQESEDLFCP 412
W+ L+ L++K P+ ++ I L + G+ +K+ + + E S Y + +
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT------IVTY 271
Query: 413 FTSLHPLVVACSKKGFETLDNVYFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQ 472
T LH C K F+ +L + +S+ V N +I + + Y
Sbjct: 272 NTVLHWY---CKKGRFKAA----IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 324
Query: 473 TFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAH 532
++ + P+ +YN L++ F K AS++ + S GL PN +++ L+D H
Sbjct: 325 LLRDMRKRM-IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 383
Query: 533 LINRDVKSALSVVDDMLAAGFQPTK 557
+ + K AL + M A G P++
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSE 408
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%)
Query: 451 VAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVF 510
V ALNC++ G ++ A + F + + P+ +Y+ L+H +T A ++
Sbjct: 288 VFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELL 347
Query: 511 EHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAG 552
+ G PN KSY+ LV+A ++ ++ A+ + +M+ G
Sbjct: 348 SEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 15/181 (8%)
Query: 376 IYALASMGNLQKAFGALYEYESAYGDSNQESEDLFCPFTSLHPLVVACSKKG-FETLDNV 434
I +LA G L AF L++ + L F+ LV + K G +T V
Sbjct: 320 IPSLAKSGRLDAAF-KLFQ--------QMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKV 370
Query: 435 YFQLENLSRSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLM 494
Y +++ RP S +I A LD A + ++ ++ + G P+ Y ++
Sbjct: 371 YMEMQGFG--HRP--SATMFVSLIDSYAKAGKLDTALRLWDEMKKS-GFRPNFGLYTMII 425
Query: 495 HAFGKLKKTHEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQ 554
+ K K A VF+ + G P +YS L++ H + V SA+ + + M AG +
Sbjct: 426 ESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLR 485
Query: 555 P 555
P
Sbjct: 486 P 486
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 443 RSERPYKSVAALNCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKK 502
R RP S + + ++ LD + + + +Q FG P + L+ ++ K K
Sbjct: 342 RKLRP--SFSVFSSLVDSMGKAGRLDTSMKVYMEMQG-FGHRPSATMFVSLIDSYAKAGK 398
Query: 503 THEASKVFEHLTSLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPT 556
A ++++ + G +PN Y++++++H + ++ A++V DM AGF PT
Sbjct: 399 LDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPT 452
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 455 NCIISGCANIWDLDRAYQTFESIQSTFGLTPDIHSYNGLMHAFGKLKKTHEASKVFEHLT 514
N ++ A + A ++++ G+ P++ +YN L+ K +KT EA +VF+ +
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 515 SLGLKPNAKSYSVLVDAHLINRDVKSALSVVDDMLAAGFQPTKEILKKIRRRCIREMDYE 574
GL P ++Y + I R + ++ M G +PT E + R+ R D++
Sbjct: 401 EKGLFPTIRTYHAFMR---ILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFD 457