Miyakogusa Predicted Gene
- Lj2g3v1252630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1252630.1 Non Chatacterized Hit- tr|I1LPX7|I1LPX7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.28,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; seg,NULL;
PPR,Pentatricopeptide repea,CUFF.36579.1
(733 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 784 0.0
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 181 2e-45
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 4e-43
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 1e-41
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 165 1e-40
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 164 2e-40
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 3e-40
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 7e-40
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 2e-39
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 2e-39
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 3e-39
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 160 4e-39
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 7e-39
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 2e-38
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 156 4e-38
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 5e-38
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 1e-37
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 1e-37
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 1e-37
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 4e-37
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 153 4e-37
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 7e-37
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 8e-37
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 1e-36
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 2e-36
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 3e-36
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 4e-36
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 6e-36
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 149 7e-36
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 149 1e-35
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 148 1e-35
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 7e-35
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 3e-34
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 5e-34
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 7e-34
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 1e-33
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 2e-33
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 7e-33
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 8e-33
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 138 1e-32
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 137 3e-32
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 4e-32
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 4e-32
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 6e-32
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 8e-32
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 135 1e-31
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 1e-31
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 3e-31
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 4e-31
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 6e-31
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 7e-31
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 7e-31
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 8e-31
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 9e-31
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 132 1e-30
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 1e-30
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 1e-30
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 1e-30
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 130 3e-30
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 4e-30
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 127 3e-29
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 7e-29
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 1e-28
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-28
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-28
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 123 5e-28
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 9e-28
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-27
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 2e-27
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 4e-27
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 6e-27
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 8e-27
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 2e-26
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 7e-26
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 115 2e-25
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 3e-25
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 5e-25
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 5e-25
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 110 4e-24
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 5e-24
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 5e-24
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 109 6e-24
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 8e-24
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-23
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 4e-23
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 7e-23
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 7e-23
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 7e-23
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 104 2e-22
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 103 3e-22
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 9e-22
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 100 3e-21
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 100 5e-21
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 6e-21
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 6e-21
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 7e-21
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 7e-21
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 9e-21
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 94 4e-19
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 7e-19
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 8e-19
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 8e-19
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 7e-18
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 3e-17
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 87 5e-17
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 6e-17
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 86 7e-17
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 84 3e-16
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 5e-16
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 83 7e-16
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 83 9e-16
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 82 1e-15
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 82 2e-15
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 81 3e-15
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 79 8e-15
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-14
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 5e-14
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 77 5e-14
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 9e-14
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 74 3e-13
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 74 5e-13
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 73 9e-13
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 9e-13
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 72 1e-12
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 72 2e-12
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 6e-12
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 70 7e-12
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 8e-12
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 69 1e-11
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 69 1e-11
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 68 2e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 67 6e-11
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 67 7e-11
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 66 8e-11
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 8e-11
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 65 1e-10
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 65 1e-10
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 65 1e-10
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 65 2e-10
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 64 3e-10
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 64 3e-10
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 64 5e-10
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-10
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 63 6e-10
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 7e-10
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 8e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 63 9e-10
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 63 9e-10
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 1e-09
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 62 1e-09
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 4e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 4e-09
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 6e-09
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 58 3e-08
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 3e-08
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 58 3e-08
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 57 4e-08
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 7e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 8e-08
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 55 2e-07
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 54 3e-07
AT2G48000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-07
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 53 8e-07
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 53 8e-07
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 9e-07
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 52 1e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 52 2e-06
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 51 3e-06
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 50 4e-06
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 8e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 9e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/607 (61%), Positives = 455/607 (74%), Gaps = 5/607 (0%)
Query: 127 DPIYKFFKTRTLVS--SQDPQTEGRLSLQKNRRTSWHLAPATVEEEAXXXXXXXXXXXXX 184
DPI KFFK+RTL S + DP E + SLQKNRRTSWHLAP + E
Sbjct: 98 DPILKFFKSRTLTSESTADPARESKFSLQKNRRTSWHLAPDFADPETEIESKPEESVFVT 157
Query: 185 XXXMGSCQKKELPLPEGVVGEIVQLARNLPENLTLEEALAQYGERVSEKECWEVLEVLGK 244
+P GV EI++LA+NL EN TL E L+ + RVS+ EC E L ++G+
Sbjct: 158 NQQTLGVH---IPFESGVAREILELAKNLKENQTLGEMLSGFERRVSDTECVEALVMMGE 214
Query: 245 ERLLVCCLYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVH 304
+ CLYF++WM QEPSL +PRAC+VLF LLGR M D +++L NLP ++FRDV
Sbjct: 215 SGFVKSCLYFYEWMSLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVR 274
Query: 305 IYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEK 364
+YNAAISGL RY+DAW+VYE+M+K N+ PD+VTC+I++T +RK GRSAK+ W FEK
Sbjct: 275 LYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEK 334
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
M+ KGVKWS++V G +VKSFC EGL AL+IQ+EMEKKG+ SN IVYNTLMDA+ KSNH
Sbjct: 335 MSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNH 394
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
+EE EGLF EM+ K +KP+AAT+NILM AY+RRMQP IVE LL EM+D+GL+P SYTC
Sbjct: 395 IEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTC 454
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE 544
LISAYGR KKMSDMAADAFL+MKKVG+KP+SHSYTALIHAYSVSGWHEKAY +FE M +E
Sbjct: 455 LISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKE 514
Query: 545 GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA 604
GIKPS+ETYT++LD FRR+GDT +M+IWKLM+ EK++GT++T+N L+DGFAKQG Y+EA
Sbjct: 515 GIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEA 574
Query: 605 RDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYX 664
RDV+SEF K+GL P+VMTYNMLMNAYARGGQ +KLPQLLKEMAALNLKPDS+TYSTMIY
Sbjct: 575 RDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYA 634
Query: 665 XXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKLRAILDVXXXXXXXXXXXXLLGIVKSKMG 724
YHK M+KSGQV D SY+KLRAIL+ +LGI+ SK G
Sbjct: 635 FVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNRKDKTAILGIINSKFG 694
Query: 725 VMQEKRK 731
++ K K
Sbjct: 695 RVKAKTK 701
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 185/373 (49%), Gaps = 2/373 (0%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
+F+ + S+ +V YN I G G + A +++ ME P+ VT + ++
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
KL R D + M KG++ + ++ C EG + + +EM ++G +
Sbjct: 252 KL-RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
+ YNTL+ +CK + +A + EM + P+ T+ L+H+ + L +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 470 MQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG 529
M+ GL P +YT L+ + ++ M++ A +M G P+ +Y ALI+ + V+G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNE-AYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 530 WHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFN 589
E A E+M+ +G+ P + +Y+T+L GF R+ D +++ + M+ + ++ +T++
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 590 ILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAAL 649
L+ GF +Q + EA D+ E ++GL P TY L+NAY G K QL EM
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 650 NLKPDSVTYSTMI 662
+ PD VTYS +I
Sbjct: 550 GVLPDVVTYSVLI 562
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 195/401 (48%), Gaps = 4/401 (0%)
Query: 264 SLVTPRACT--VLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
S V+P T +L AG D + LF + + +V YN I G + +D
Sbjct: 199 SQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIV 381
+K+ SM + P+ ++ ++++ + + GR K+ + +MNR+G E ++
Sbjct: 259 GFKLLRSMALKGLEPNLISYNVVINGLCREGR-MKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 382 KSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK 441
K +C EG +AL++ +EM + G+ + I Y +L+ + CK+ ++ A +M+ + +
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
P T+ L+ +S++ +L EM D G P+ +Y LI+ + KM D A
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA- 436
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFR 561
MK+ G+ P SY+ ++ + S ++A M +GIKP TY++L+ GF
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 562 RAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVM 621
T+ +++ M+ + + T+ L++ + +G +A + +E + G+ P V+
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556
Query: 622 TYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
TY++L+N + + + +LL ++ P VTY T+I
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 168/344 (48%), Gaps = 1/344 (0%)
Query: 353 RSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVY 412
R+ A F++M V + +++ FC G + AL + +ME KG N + Y
Sbjct: 184 RNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTY 243
Query: 413 NTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQD 472
NTL+D +CK +++ L M K ++P ++N++++ R + K V +L EM
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHE 532
G +Y LI Y ++ A +M + G+ P+ +YT+LIH+ +G
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQ-ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 533 KAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILV 592
+A + M+ G+ P+ TYTTL+DGF + G ++ + M + VT+N L+
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLK 652
+G G+ +A V+ + + GL P V++Y+ +++ + R + ++ +EM +K
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 653 PDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
PD++TYS++I +++M++ G D +Y L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 194/428 (45%), Gaps = 25/428 (5%)
Query: 258 MRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCG 317
++ EP+L++ V+ L R G ++ + + D YN I G G
Sbjct: 268 LKGLEPNLISY---NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEG 324
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
+ A ++ M + + P +T + ++ M K G + A F ++M +G+ +E
Sbjct: 325 NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR-AMEFLDQMRVRGLCPNERTY 383
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
+V F +G ++ A + EM G + + YN L++ C + +E+A + +MK
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
K + P +++ ++ + R + EM + G+KP +Y+ LI + Q++ +
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
A D + +M +VG+ P +YTALI+AY + G EKA M +G+ P + TY+ L+
Sbjct: 504 -ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
+G + T+ ++ + E+ + VT++ L++ + +E + V+S
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN----IEFKSVVS-------- 610
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXY 677
L+ + G ++ Q+ + M N KPD Y+ MI+
Sbjct: 611 --------LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Query: 678 HKQMIKSG 685
+K+M+KSG
Sbjct: 663 YKEMVKSG 670
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 153/328 (46%), Gaps = 4/328 (1%)
Query: 369 GVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEA 428
GV VL A ++S + +S A + EM + V N YN L+ FC + +++ A
Sbjct: 168 GVLSYNAVLDATIRS---KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 429 EGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISA 488
LF +M+ K P T+N L+ Y + + LL M GL+P SY +I+
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 489 YGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKP 548
R+ +M +++ +M + G +Y LI Y G +A V M R G+ P
Sbjct: 285 LCREGRMKEVSF-VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 549 SIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVI 608
S+ TYT+L+ +AG+ M+ M + + T+ LVDGF+++G EA V+
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 609 SEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXX 668
E G P+V+TYN L+N + G+ +L++M L PD V+YST++
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 669 XXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
++M++ G D +Y L
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSL 491
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 167/410 (40%), Gaps = 20/410 (4%)
Query: 263 PSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDA 322
PS++T T L + +AG ++ M + + Y + G G +A
Sbjct: 343 PSVITY---TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 323 WKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVK 382
++V M + P VT + ++ G+ +DA E M KG+ ++
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGK-MEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 383 SFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKP 442
FC V AL ++ EM +KG+ + I Y++L+ FC+ +EA L+ EM + P
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADA 502
T+ L++AY + L EM + G+ P +Y+ LI+ +Q + + A
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE-AKRL 577
Query: 503 FLKM---KKVGIKPTSH------------SYTALIHAYSVSGWHEKAYVAFENMQREGIK 547
LK+ + V T H S +LI + + G +A FE+M + K
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 548 PSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDV 607
P Y ++ G RAGD + ++K M+ VT LV K+G+ E V
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Query: 608 ISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
I + +L+ R G + +L EMA P+ ++
Sbjct: 698 IVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%)
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADA 502
T++ F++++ +YSR +++ Q G P SY ++ A R K+ A +
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 503 FLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR 562
F +M + + P +Y LI + +G + A F+ M+ +G P++ TY TL+DG+ +
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 563 AGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMT 622
K+ + M + +E +++N++++G ++G+ E V++E + G +T
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 623 YNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
YN L+ Y + G + + EM L P +TY+++I+
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH 353
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 198/436 (45%), Gaps = 5/436 (1%)
Query: 231 SEKECWEVLEVLGKERLLVCCLYFFQWMRAQEP--SLVTPRACTVLFPLLGRAGMGDKLM 288
+ E L+ LG + L F W Q+ S++ ++ +LG+ G
Sbjct: 134 TSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAA 193
Query: 289 VLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVM 348
+F L DV+ Y + IS GRY +A V++ ME+D +P +T ++++ V
Sbjct: 194 NMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVF 253
Query: 349 RKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEG-LVSRALIIQSEMEKKGVFS 407
K+G EKM G+ ++ + C G L A + EM+ G
Sbjct: 254 GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSY 312
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
+ + YN L+D + KS+ +EA + EM P+ T+N L+ AY+R L
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 468 AEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSV 527
+M + G KP +YT L+S + R K+ + A F +M+ G KP ++ A I Y
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKV-ESAMSIFEEMRNAGCKPNICTFNAFIKMYGN 431
Query: 528 SGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVT 587
G + F+ + G+ P I T+ TLL F + G + ++K M + T
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 588 FNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMA 647
FN L+ +++ G + +A V G+ P + TYN ++ A ARGG + ++L EM
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 648 ALNLKPDSVTYSTMIY 663
KP+ +TY ++++
Sbjct: 552 DGRCKPNELTYCSLLH 567
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/507 (23%), Positives = 207/507 (40%), Gaps = 82/507 (16%)
Query: 262 EPSLVTPRACTVLFPLLGRAGMG-DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR-- 318
+P+L+T V+ + G+ G +K+ L + S D + YN I+ CC R
Sbjct: 240 KPTLIT---YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT---CCKRGS 293
Query: 319 -YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
+++A +V+E M+ D VT + ++ V K R K+A +M G S
Sbjct: 294 LHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR-PKEAMKVLNEMVLNGFSPSIVTY 352
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
+++ ++ +G++ A+ ++++M +KG + Y TL+ F ++ VE A +F EM+
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
KP TFN + Y R + + + E+ GL P ++ L++ +G Q M
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG-QNGMDS 471
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGI----------- 546
+ F +MK+ G P ++ LI AYS G E+A + M G+
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 547 ------------------------KPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVE 582
KP+ TY +LL + + M + + + S +E
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591
Query: 583 GTKV-----------------------------------TFNILVDGFAKQGQYMEARDV 607
V T N +V + ++ +A V
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 651
Query: 608 ISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXX 667
+ + G P++ TYN LM ++R K ++L+E+ A +KPD ++Y+T+IY
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCR 711
Query: 668 XXXXXXXXXYHKQMIKSGQVMDVDSYQ 694
+M SG V DV +Y
Sbjct: 712 NTRMRDASRIFSEMRNSGIVPDVITYN 738
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/506 (21%), Positives = 207/506 (40%), Gaps = 52/506 (10%)
Query: 191 CQKKELPLPEGVVGEIVQLARNLPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVC 250
C++ L V E ++ A + +T L YG+ KE +VL +
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM-------- 340
Query: 251 CLYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAI 310
+ PS+VT + L R GM D+ M L + DV Y +
Sbjct: 341 ------VLNGFSPSIVTYNS---LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 311 SGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGV 370
SG G+ E A ++E M +P+ T + + + G+ + F+++N G+
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFT-EMMKIFDEINVCGL 450
Query: 371 KWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEG 430
++ F G+ S + EM++ G +NTL+ A+ + E+A
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 431 LFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYG 490
++ M V P +T+N ++ A +R + E +LAEM+D KP +Y L+ AY
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 491 RQKKMSDM----------------------------------AADAFLKMKKVGIKPTSH 516
K++ M A AF ++K+ G P
Sbjct: 571 NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630
Query: 517 SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM 576
+ +++ Y KA + M+ G PS+ TY +L+ R+ D +I + +
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 577 MSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQH 636
+++ ++ +++N ++ + + + +A + SE G+ P V+TYN + +YA
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMF 750
Query: 637 SKLPQLLKEMAALNLKPDSVTYSTMI 662
+ +++ M +P+ TY++++
Sbjct: 751 EEAIGVVRYMIKHGCRPNQNTYNSIV 776
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 163/408 (39%), Gaps = 27/408 (6%)
Query: 214 PENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQEPSLVTPRACTV 273
P T + YG R E ++ + + VC L P +VT
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEIN-----VCGL---------SPDIVT---WNT 459
Query: 274 LFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDN 333
L + G+ GM ++ +F+ + + + +N IS CG +E A VY M
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 334 IRPDHVTCSIMVTVMRKLGRSAKDAWYFFEK----MNRKGVKWSEEVLGAIVKSFCAEGL 389
+ PD T + TV+ L R W EK M K +E +++ ++
Sbjct: 520 VTPDLSTYN---TVLAALARGG--MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
+ + E+ + A++ TL+ K + + EAE F E+K + P T N
Sbjct: 575 IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNS 634
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
++ Y RR +L M++ G P+ +Y L+ + R + + ++
Sbjct: 635 MVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK-SEEILREILAK 693
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
GIKP SY +I+AY + A F M+ GI P + TY T + + +
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
+ + + M+ + T+N +VDG+ K + EA+ + + + H
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPH 801
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 178/361 (49%), Gaps = 2/361 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ Y A I+GL G + A + MEK I D V S ++ + K R DA
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY-RHVDDALNL 262
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F +M+ KG++ +++ C G S A + S+M ++ + N + +N+L+DAF K
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK 322
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ EAE LF EM +++ P T+N L++ + + + + M P +
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LI+ + + KK+ D + F M + G+ + +YT LIH + + + A + F+ M
Sbjct: 383 YNTLINGFCKAKKVVD-GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
+G+ P+I TY TLLDG + G + M +++ + K+E T+NI+ +G K G+
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
+ D+ G+ P V+ YN +++ + + G + L +M PDS TY+T+
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Query: 662 I 662
I
Sbjct: 562 I 562
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 224/495 (45%), Gaps = 37/495 (7%)
Query: 191 CQKKELPLPEGVVGEIVQLARNLPENLTLEEALAQY--GERVSEKECW-EVLEVLGKE-- 245
C++ +L ++G++++L P +TL L + G R+SE + + +G +
Sbjct: 111 CRRSQLSFALAILGKMMKLGYG-PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 169
Query: 246 --RLLVCCLYFFQWMRAQE--------------PSLVTPRACTVLFPLLGRAGMGDKLMV 289
FQ +A E P LVT A + L + G D +
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA---VINGLCKRGEPDLALN 226
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
L + K DV IY+ I L +DA ++ M+ IRPD T S +++ +
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
GR + DA M + + + +++ +F EG + A + EM ++ + N
Sbjct: 287 NYGRWS-DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVEN--LL 467
+ YN+L++ FC + ++EA+ +F M +K+ P T+N L++ + + K+V+ L
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK--AKKVVDGMELF 403
Query: 468 AEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSV 527
+M GL +YT LI + Q D A F +M G+ P +Y L+
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGF-FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 528 SGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK-- 585
+G EKA V FE +Q+ ++P I TY + +G +AG + W L S ++G K
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG---WDLFCSLSLKGVKPD 519
Query: 586 -VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
+ +N ++ GF K+G EA + + + G P TYN L+ A+ R G + +L+K
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 579
Query: 645 EMAALNLKPDSVTYS 659
EM + D+ TY
Sbjct: 580 EMRSCRFAGDASTYG 594
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 188/412 (45%), Gaps = 2/412 (0%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D+ + LF + S+ F + ++ +S + +++ E ME + + T +IM
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ + + + + A KM + G S L +++ FC +S A+ + +M + G
Sbjct: 107 INCLCRRSQLSF-ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
+ + + TL+ + N EA L M K +P T+ +++ +R +P +
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
NLL +M+ ++ Y+ +I + + + + D A + F +M GI+P +Y++LI
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD-ALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
G A +M I P++ T+ +L+D F + G K++ M+ ++
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
VT+N L++GF + EA+ + + P V+TYN L+N + + + +L +
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 645 EMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+M+ L ++VTY+T+I+ KQM+ G ++ +Y L
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 143/343 (41%), Gaps = 35/343 (10%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D + LF + + DV Y++ IS L GR+ DA ++ M + I P+ VT + +
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ K G+ +A F++M ++ + + +++ FC + A I + M K
Sbjct: 317 IDAFAKEGKLI-EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
+ + YNTL++ FCK+ V + LF +M + + T+ L+H + + +
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMS---------------------DMAADAF 503
+ +M G+ P +Y L+ + K+ ++ ++
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 504 LKMKKV-------------GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSI 550
K KV G+KP +Y +I + G E+AY F M+ +G P
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVD 593
TY TL+ R GD ++ K M S + G T+ ++ D
Sbjct: 556 GTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 193/400 (48%), Gaps = 2/400 (0%)
Query: 234 ECWEVLEVLGKERLLVCCLYFFQW-MRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFR 292
+C ++ LG + F+++ ++ + + + + LGR G +F
Sbjct: 198 DCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFE 257
Query: 293 NLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLG 352
+ V+ ++A IS G +E+A V+ SM++ +RP+ VT + ++ K G
Sbjct: 258 TAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGG 317
Query: 353 RSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVY 412
K FF++M R GV+ +++ GL A + EM + + + Y
Sbjct: 318 MEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSY 377
Query: 413 NTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQD 472
NTL+DA CK ++ A + +M K + P +++ ++ +++ + NL EM+
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHE 532
+G+ SY L+S Y + + S+ A D +M VGIK +Y AL+ Y G ++
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGR-SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 533 KAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILV 592
+ F M+RE + P++ TY+TL+DG+ + G + M+I++ S + V ++ L+
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
D K G A +I E K G+ P V+TYN +++A+ R
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 196/427 (45%), Gaps = 42/427 (9%)
Query: 267 TPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR----YEDA 322
T A + L GR+G+ ++ + +F ++ ++ YNA I CG+ ++
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID---ACGKGGMEFKQV 323
Query: 323 WKVYESMEKDNIRPDHVTCSIMVTVMRKLG--RSAKDAWYFFEKMNRKGVKWSEEVLGAI 380
K ++ M+++ ++PD +T + ++ V + G +A++ F++M + ++ +
Sbjct: 324 AKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN---LFDEMTNRRIEQDVFSYNTL 380
Query: 381 VKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV 440
+ + C G + A I ++M K + N + Y+T++D F K+ +EA LF EM+ +
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
Query: 441 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA 500
++N L+ Y++ + + ++L EM +G+K +Y L+ YG+Q K D
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY-DEVK 499
Query: 501 DAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
F +MK+ + P +Y+ LI YS G +++A F + G++ + Y+ L+D
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY------------------- 601
+ G + + + M E + VT+N ++D F +
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSAL 619
Query: 602 -----MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQH-SKLPQLLKEMAALNLKPDS 655
E VI FG++ T + N G Q S + ++ ++M L +KP+
Sbjct: 620 SALTETEGNRVIQLFGQL----TTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNV 675
Query: 656 VTYSTMI 662
VT+S ++
Sbjct: 676 VTFSAIL 682
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 125/250 (50%)
Query: 413 NTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQD 472
+ ++ + V A+ +F A T F+ L+ AY R + ++ M++
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHE 532
GL+P +Y +I A G+ A F +M++ G++P ++ +L+ S G E
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 533 KAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILV 592
A F+ M I+ + +Y TLLD + G +I M +++ V+++ ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLK 652
DGFAK G++ EA ++ E +G+ ++YN L++ Y + G+ + +L+EMA++ +K
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 653 PDSVTYSTMI 662
D VTY+ ++
Sbjct: 477 KDVVTYNALL 486
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 222/491 (45%), Gaps = 33/491 (6%)
Query: 191 CQKKELPLPEGVVGEIVQLARNLPENLTLEEALAQY--GERVSEKECW-EVLEVLGKE-- 245
C++ +LPL V+G++++L P +TL L Y +R+SE + + V G +
Sbjct: 127 CRRSQLPLALAVLGKMMKLGYE-PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185
Query: 246 ----RLLVCCLYFFQ------------WMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMV 289
L+ L+ + +P LVT V+ L + G D
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY---GVVVNGLCKRGDTDLAFN 242
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
L + K V IYN I GL +DA +++ ME IRP+ VT S +++ +
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
GR + DA M + + A++ +F EG + A + EM K+ + +
Sbjct: 303 NYGRWS-DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
+ Y++L++ FC + ++EA+ +F M +K+ P T+N L+ + + + + + E
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 470 MQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG 529
M GL +Y LI Q DMA + F +M G+ P +Y L+ +G
Sbjct: 422 MSQRGLVGNTVTYNILIQGL-FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 530 WHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK---V 586
EKA V FE +QR ++P+I TY +++G +AG + W L + ++G K V
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG---WDLFCNLSLKGVKPDVV 537
Query: 587 TFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
+N ++ GF ++G EA + E + G P YN L+ A R G +L+KEM
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Query: 647 AALNLKPDSVT 657
+ D+ T
Sbjct: 598 RSCGFAGDAST 608
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 171/379 (45%), Gaps = 2/379 (0%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
+ +DA ++ M K P + S +++ + K+ + E+M G+ +
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNK-FDVVISLGEQMQNLGIPHNHYTY 119
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
++ FC + AL + +M K G N + ++L++ +C S + EA L +M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
+P TFN L+H + L+ M G +P +Y +++ ++ +D
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD-TD 238
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
+A + KM++ ++P Y +I + A F+ M+ +GI+P++ TY++L+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
G ++ M+ K+ TF+ L+D F K+G+ +EA + E K +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXY 677
P+++TY+ L+N + + + Q+ + M + + PD VTY+T+I
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 678 HKQMIKSGQVMDVDSYQKL 696
++M + G V + +Y L
Sbjct: 419 FREMSQRGLVGNTVTYNIL 437
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 1/224 (0%)
Query: 477 PTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYV 536
P+ ++ L+SA + K D+ +M+ +GI ++Y+ LI+ + A
Sbjct: 79 PSIIEFSKLLSAIAKMNKF-DVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA 137
Query: 537 AFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFA 596
M + G +P+I T ++LL+G+ + + + M + VTFN L+ G
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197
Query: 597 KQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSV 656
+ EA +I G P ++TY +++N + G LL +M L+P +
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 657 TYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKLRAIL 700
Y+T+I K+M G +V +Y L + L
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%)
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
T+ Y +S G + D A F +M K P+ ++ L+ A + +
Sbjct: 44 TSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISL 103
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAK 597
E MQ GI + TY+ L++ F R + + MM E VT + L++G+
Sbjct: 104 GEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH 163
Query: 598 QGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
+ EA ++ + G P +T+N L++ + S+ L+ M A +PD VT
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223
Query: 658 YSTMI 662
Y ++
Sbjct: 224 YGVVV 228
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 191/402 (47%), Gaps = 11/402 (2%)
Query: 259 RAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
R +P LVT TV+ L R + D + L + + K DV IYN I GL
Sbjct: 217 RGCQPDLVTYG--TVVNGLCKRGDI-DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 319 YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLG 378
+DA ++ M+ IRPD T S +++ + GR + DA M + + +
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS-DASRLLSDMIERKINPNVVTFS 332
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
A++ +F EG + A + EM K+ + + Y++L++ FC + ++EA+ +F M +K
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
+ P T++ L+ + + + + L EM GL +YT LI + Q + D
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF-FQARDCDN 451
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
A F +M VG+ P +Y L+ +G KA V FE +QR ++P I TY +++
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTK---VTFNILVDGFAKQGQYMEARDVISEFGKIG 615
G +AG + W+L + ++G + +N ++ GF ++G EA ++ + + G
Sbjct: 512 GMCKAGKVEDG---WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 616 LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
P TYN L+ A R G +L+KEM + D+ T
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 178/361 (49%), Gaps = 2/361 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ Y ++GL G + A + + MEK I D V + ++ + K + DA
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY-KHMDDALNL 280
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F +M+ KG++ +++ C G S A + S+M ++ + N + ++ L+DAF K
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ EAE L+ EM +++ P T++ L++ + + +++ M P +
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y+ LI + + K++ + + F +M + G+ + +YT LIH + + + A + F+ M
Sbjct: 401 YSTLIKGFCKAKRVEE-GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
G+ P+I TY LLDG + G M +++ + +E T+NI+++G K G+
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
+ ++ G+ P V+ YN +++ + R G + LLK+M P+S TY+T+
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL 579
Query: 662 I 662
I
Sbjct: 580 I 580
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 147/307 (47%), Gaps = 1/307 (0%)
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
V A+ + +M K F + + +N L+ A K N E L +M+ + T++I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
++ + RR Q + +LA+M +G +P + + L++ Y K++SD A +M ++
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA-LVDQMVEM 182
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
G KP + ++T LIH + +A + M + G +P + TY T+++G + GD
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
+ + K M K+E V +N ++DG K +A ++ +E G+ P V TY+ L++
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMD 689
G+ S +LL +M + P+ VT+S +I + +MIK D
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 690 VDSYQKL 696
+ +Y L
Sbjct: 363 IFTYSSL 369
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 180/412 (43%), Gaps = 2/412 (0%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D + LF ++ S+ F + +N +S + ++E + E M+ I D T SI
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ + + + A KM + G + L +++ +C +S A+ + +M + G
Sbjct: 125 INCFCRRSQLSL-ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
+ + TL+ N EA L +M + +P T+ +++ +R +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
+LL +M+ ++ Y +I + K M D A + F +M GI+P +Y++LI
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD-ALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
G A +M I P++ T++ L+D F + G K++ M+ ++
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
T++ L++GF + EA+ + P V+TY+ L+ + + + + +L +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 645 EMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
EM+ L ++VTY+T+I+ KQM+ G ++ +Y L
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 223/494 (45%), Gaps = 29/494 (5%)
Query: 191 CQKKELPLPEGVVGEIVQLARNLPENLTLEEALAQY--GERVSEK----ECWEVLEVLGK 244
C++ +LPL V+G++++L P+ +TL L Y G+R+SE + V+E
Sbjct: 126 CRRSQLPLALAVLGKMMKLGYE-PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 245 ERLLVCCLY-FFQWMRAQEP----SLVTPRAC--------TVLFPLLGRAGMGDKLMVLF 291
++ F +A E + R C TV+ L R + D + L
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI-DLALSLL 243
Query: 292 RNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKL 351
+ + K DV IY I L DA ++ M+ IRP+ VT + ++ +
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 352 GRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIV 411
GR + DA M + + + A++ +F EG + A + EM K+ + +
Sbjct: 304 GRWS-DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
Y++L++ FC + ++EA+ +F M +K+ P T+N L+ + + + + L EM
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
GL +Y LI Q DMA F KM G+ P +Y+ L+ G
Sbjct: 423 QRGLVGNTVTYNTLIQGL-FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK---VTF 588
EKA V FE +Q+ ++P I TY +++G +AG + W L S ++G K + +
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG---WDLFCSLSLKGVKPNVIIY 538
Query: 589 NILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA 648
++ GF ++G EA + E + G P TYN L+ A R G + +L+KEM +
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Query: 649 LNLKPDSVTYSTMI 662
D+ T S +I
Sbjct: 599 CGFVGDASTISMVI 612
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 145/334 (43%), Gaps = 1/334 (0%)
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
E+M + + ++ FC + AL + +M K G + + ++L++ +C
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY 482
+ EA L +M +P TFN L+H + L+ M G +P +Y
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 483 TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ 542
+++ ++ + D+A KM+K I+ YT +I A A F M
Sbjct: 224 GTVVNGLCKRGDI-DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282
Query: 543 REGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYM 602
+GI+P++ TY +L+ G ++ M+ K+ VTF+ L+D F K+G+ +
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 603 EARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
EA + E K + P + TY+ L+N + + + + + M + + P+ VTY+T+I
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 663 YXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
++M + G V + +Y L
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 137/306 (44%), Gaps = 5/306 (1%)
Query: 393 ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMH 452
A+ + EM + + + +N L+ A K N + L M+ + ++NIL++
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 453 AYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA--DAFLKMKKVG 510
+ RR Q + +L +M +G +P + + L++ Y K++S+ A D M+
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME--- 180
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
+P + ++ LIH + +A + M G +P + TY T+++G + GD +
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAY 630
+ K M K+E V + ++D +A ++ +E G+ P V+TYN L+
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 631 ARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDV 690
G+ S +LL +M + P+ VT+S +I + +MIK D+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 691 DSYQKL 696
+Y L
Sbjct: 361 FTYSSL 366
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 8/246 (3%)
Query: 253 YFFQWMRAQE--PSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAI 310
+ F+ M +++ P++VT F R G M LFR + + YN I
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG---MELFREMSQRGLVGNTVTYNTLI 437
Query: 311 SGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGV 370
GL G + A K+++ M D + PD +T SI++ + K G+ K A FE + + +
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK-ALVVFEYLQKSKM 496
Query: 371 KWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEG 430
+ +++ C G V + + KGV N I+Y T++ FC+ EEA+
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 431 LFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY- 489
LF EMK P + T+N L+ A R L+ EM+ G A++ + +I+
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH 616
Query: 490 -GRQKK 494
GR +K
Sbjct: 617 DGRLEK 622
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%)
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
D A D F +M + P+ + L+ A + + E MQ I + +Y L
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
++ F R + + MM E VT + L++G+ + EA ++ + +
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
P +T+N L++ + S+ L+ M A +PD TY T++
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 181/361 (50%), Gaps = 2/361 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ Y ++GL G + A + + ME+ I P V + ++ + ++ DA
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY-KNVNDALNL 278
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F +M+ KG++ + ++++ C G S A + S+M ++ + N + ++ L+DAF K
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ EAE L+ EM +++ P T++ L++ + + +++ M P +
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LI + + K++ D + F +M + G+ + +YT LIH + + + A + F+ M
Sbjct: 399 YNTLIKGFCKAKRV-DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
+G+ P I TY+ LLDG G +T + +++ + K+E T+NI+++G K G+
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
+ D+ G+ P V+TY +M+ + R G + L +EM PDS TY+T+
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Query: 662 I 662
I
Sbjct: 578 I 578
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 188/403 (46%), Gaps = 11/403 (2%)
Query: 258 MRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCG 317
++ +P LVT ++ L + G D + L + + K V IYN I L
Sbjct: 214 VKGCQPDLVTY---GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYK 270
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
DA ++ M+ IRP+ VT + ++ + GR + DA M + + +
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS-DASRLLSDMIERKINPNVVTF 329
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
A++ +F EG + A + EM K+ + + Y++L++ FC + ++EA+ +F M +
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
K+ P T+N L+ + + + L EM GL +YT LI + Q + D
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF-FQARECD 448
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
A F +M G+ P +Y+ L+ +G E A V FE +QR ++P I TY ++
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTK---VTFNILVDGFAKQGQYMEARDVISEFGKI 614
+G +AG + W L S ++G K VT+ ++ GF ++G EA + E +
Sbjct: 509 EGMCKAGKVEDG---WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 615 GLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
G P TYN L+ A+ R G + +L++EM + D+ T
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 186/412 (45%), Gaps = 2/412 (0%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D + LF ++ S+ F + ++ +S + +++ + E M+ I + T SI+
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ + + + A KM + G + L +++ FC +S A+ + +M + G
Sbjct: 123 INCFCRRSQLSL-ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
++ +NTL+ + N EA L M K +P T+ I+++ +R +
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
+LL +M+ ++P Y +I A K ++D A + F +M GI+P +Y +LI
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND-ALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
G A +M I P++ T++ L+D F + G K++ M+ ++
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
T++ L++GF + EA+ + P V+TYN L+ + + + + +L +
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 645 EMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
EM+ L ++VTY+T+I+ KQM+ G + D+ +Y L
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 133/297 (44%), Gaps = 6/297 (2%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
+V ++A I + G+ +A K+Y+ M K +I PD T S ++ R +A +
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR-LDEAKHM 383
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
FE M K + ++K FC V + + EM ++G+ N + Y TL+ F +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ + A+ +F +M + V P T++IL+ + + + +Q ++P +
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y +I + K+ D D F + G+KP +YT ++ + G E+A F M
Sbjct: 504 YNIMIEGMCKAGKVED-GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTF----NILVDG 594
+ EG P TY TL+ R GD ++ + M S + G T N+L DG
Sbjct: 563 KEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDG 619
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 164/357 (45%), Gaps = 2/357 (0%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
+N + GL G EDA V + M+ PD T SI+ A+ A +E
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS-NEKAEAALGVYETA 345
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
GVK + ++ + C EG + +A I KG+ N ++YNT++D +C+ +
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
A M+ + +KP +N L+ + + + E + +M+ G+ P+ +Y L
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
I YGR+ + D D +M+ G P SY LI+ +A + +M+ G
Sbjct: 466 IGGYGRKYEF-DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG 524
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
+ P + Y L+DG G + + K M+ + +E VT+N L+DG + G+ EA
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAE 584
Query: 606 DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
D++ E + GL P V TYN L++ Y G + L +EM +KP TY +I
Sbjct: 585 DLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 214/498 (42%), Gaps = 77/498 (15%)
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
EPSL+T L L +AGM + + + + D ++ G + E
Sbjct: 281 EPSLIT---FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEA 337
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIV 381
A VYE+ ++ + TCSI++ + K G+ K +M KG+ +E + ++
Sbjct: 338 ALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM-AKGLVPNEVIYNTMI 396
Query: 382 KSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK 441
+C +G + A + MEK+G+ + + YN L+ FC+ +E AE +MK K V
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM------ 495
P+ T+NIL+ Y R+ + ++L EM+D G P SY LI+ + K+
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 496 -SDMA------------------------ADAFL---KMKKVGIKPTSHSYTALIHAYSV 527
DM DAF +M K GI+ +Y LI S+
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 528 SGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVT 587
+G +A + R+G+KP + TY +L+ G+ AG+ Q + +++ M ++ T T
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636
Query: 588 FNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSK--------- 638
+++L+ K+G + R FG++ L P ++ YN +++ YA G K
Sbjct: 637 YHLLISLCTKEGIELTER----LFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMI 692
Query: 639 --------------------------LPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXX 672
+ L+ EM A ++P++ TY+ ++
Sbjct: 693 EKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYM 752
Query: 673 XXXXYHKQMIKSGQVMDV 690
++++M + G ++DV
Sbjct: 753 SAYVWYREMQEKGFLLDV 770
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 185/410 (45%), Gaps = 4/410 (0%)
Query: 254 FFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGL 313
F PSL + +L LL + M + LF L + + + L
Sbjct: 95 LFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHL 154
Query: 314 LCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWS 373
+ ++ V+ ++ + + RP + KL K F +M + S
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGK-GLELFNRMKHDRIYPS 213
Query: 374 EEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFV 433
+ ++ C ++ A + EM + + + I YNTL+D +CK+ + E++ +
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273
Query: 434 EMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQK 493
MKA +++P+ TFN L+ + + EN+L EM+D+G P A +++ L Y +
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 494 KMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETY 553
K ++ A + G+K +++ + L++A G EKA +G+ P+ Y
Sbjct: 334 K-AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 554 TTLLDGFRRAGD-TQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFG 612
T++DG+ R GD MKI + M + ++ + +N L+ F + G+ A +++
Sbjct: 393 NTMIDGYCRKGDLVGARMKI-EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 613 KIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
G+ P+V TYN+L+ Y R + K +LKEM P+ V+Y T+I
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 185/361 (51%), Gaps = 2/361 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ N+ ++G R DA + + M + +PD VT + ++ + L A +A
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF-LHNKASEAVAL 205
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
++M ++G + GA+V C G AL + ++ME + +N ++Y+T++D+ CK
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK 265
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
H ++A LF EM+ K V+P T++ L+ + LL++M + + P +
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
++ LI A+ ++ K+ A + +M K I P +Y++LI+ + + +A E M
Sbjct: 326 FSALIDAFVKKGKLVK-AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
R+ P++ TY TL++GF +A M++++ M + G VT+ L+ GF +
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
A+ V + +G+HP ++TYN+L++ + G+ +K + + + ++PD TY+ M
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 662 I 662
I
Sbjct: 505 I 505
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 148/307 (48%), Gaps = 7/307 (2%)
Query: 259 RAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
R +P LVT A + L + G D + L + ++K +V IY+ I L C R
Sbjct: 212 RGCQPDLVTYGA---VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL-CKYR 267
Query: 319 YED-AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
+ED A ++ ME +RP+ +T S +++ + GR + DA M + + +
Sbjct: 268 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWS-DASRLLSDMIERKINPNLVTF 326
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
A++ +F +G + +A + EM K+ + N Y++L++ FC + + EA+ + M
Sbjct: 327 SALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
K+ P T+N L++ + + + L EM GL +YT LI + Q + D
Sbjct: 387 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF-FQARDCD 445
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
A F +M VG+ P +Y L+ +G KA V FE +QR ++P I TY ++
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Query: 558 DGFRRAG 564
+G +AG
Sbjct: 506 EGMCKAG 512
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 147/300 (49%), Gaps = 2/300 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ Y A ++GL G + A + ME I + V S ++ + K R DA
Sbjct: 217 DLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY-RHEDDALNL 275
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F +M KGV+ + +++ C G S A + S+M ++ + N + ++ L+DAF K
Sbjct: 276 FTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK 335
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ +AE L+ EM +++ P T++ L++ + + + +L M P +
Sbjct: 336 KGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 395
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LI+ + + K++ D + F +M + G+ + +YT LIH + + + A + F+ M
Sbjct: 396 YNTLINGFCKAKRV-DKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
G+ P+I TY LLDG + G M +++ + +E T+NI+++G K G++
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 183/412 (44%), Gaps = 2/412 (0%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D + LF + S+ F + ++ +S + +++ E ME I + T +I+
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ + A KM + G + L +++ FC +S A+ + +M + G
Sbjct: 120 INCFCRC-SRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
+ + + TL+ N EA L M + +P T+ +++ +R +
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
NLL +M+ ++ Y+ +I + + + D A + F +M+ G++P +Y++LI
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD-ALNLFTEMENKGVRPNVITYSSLISC 297
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
G A +M I P++ T++ L+D F + G K+++ M+ ++
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
T++ L++GF + EA+ ++ + P V+TYN L+N + + + K +L +
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 645 EMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
EM+ L ++VTY+T+I+ KQM+ G ++ +Y L
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 469
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 173/356 (48%), Gaps = 2/356 (0%)
Query: 341 CSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEM 400
C ++ M KL + W F+ ++ G + V ++ FC EG +S A + E+
Sbjct: 208 CGNLLDRMMKLNPTGT-IWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEI 266
Query: 401 EKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQP 460
K+ + + +NTL++ +CK +++E L +M+ +P T++ L++A + +
Sbjct: 267 TKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKM 326
Query: 461 KIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTA 520
L EM GL P +T LI + R ++ D+ +++ KM G++P Y
Sbjct: 327 DGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI-DLMKESYQKMLSKGLQPDIVLYNT 385
Query: 521 LIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEK 580
L++ + +G A + M R G++P TYTTL+DGF R GD +T ++I K M
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 581 VEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLP 640
+E +V F+ LV G K+G+ ++A + E + G+ P +TY M+M+A+ + G
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGF 505
Query: 641 QLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+LLKEM + P VTY+ ++ M+ G V D +Y L
Sbjct: 506 KLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTL 561
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 165/337 (48%), Gaps = 2/337 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
+V+++N ++ G DA KV++ + K +++P V+ + ++ K+G + + +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG-NLDEGFRL 297
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
+M + + A++ + C E + A + EM K+G+ N +++ TL+ +
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ ++ + + +M +K ++P +N L++ + + N++ M GL+P +
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
YT LI + R + + A + +M + GI+ ++AL+ G A A M
Sbjct: 418 YTTLIDGFCRGGDV-ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
R GIKP TYT ++D F + GD QT K+ K M S+ + VT+N+L++G K GQ
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSK 638
A ++ IG+ P +TYN L+ + R SK
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 106/222 (47%), Gaps = 5/222 (2%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ +YN ++G G A + + M + +RPD +T + ++ + G + A
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR-GGDVETALEI 437
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
++M++ G++ A+V C EG V A EM + G+ + + Y +MDAFCK
Sbjct: 438 RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK 497
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ L EM++ P+ T+N+L++ + Q K + LL M +IG+ P +
Sbjct: 498 KGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDIT 557
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIH 523
Y L+ + R ++ +++ ++GI SY ++++
Sbjct: 558 YNTLLEGHHRHAN----SSKRYIQKPEIGIVADLASYKSIVN 595
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 1/171 (0%)
Query: 493 KKMSDMAADAFLKMKKVGIKP-TSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIE 551
+K + A+ F+ + ++ + P AL+ Y+ G+ A F ++ I
Sbjct: 147 RKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIR 206
Query: 552 TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF 611
LLD + T T+ + ++ FNIL++ F K+G +A+ V E
Sbjct: 207 GCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEI 266
Query: 612 GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
K L PTV+++N L+N Y + G + +L +M +PD TYS +I
Sbjct: 267 TKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 193/411 (46%), Gaps = 1/411 (0%)
Query: 252 LYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAIS 311
L F++M+ Q T++ LLGR G+ DK + +F +PS R V Y A I+
Sbjct: 125 LRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALIN 184
Query: 312 GLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVK 371
GRYE + ++ + M+ + I P +T + ++ + G + F +M +G++
Sbjct: 185 AYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 244
Query: 372 WSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGL 431
++ + GL A ++ M G+ + Y+ L++ F K +E+ L
Sbjct: 245 PDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDL 304
Query: 432 FVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGR 491
EM + P ++N+L+ AY++ K + +MQ G P AN+Y+ L++ +G+
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 364
Query: 492 QKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIE 551
+ D+ FL+MK P + +Y LI + G+ ++ F +M E I+P +E
Sbjct: 365 SGRYDDV-RQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 552 TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF 611
TY ++ + G + KI + M + + + + +++ F + Y EA +
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 612 GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
++G +P++ T++ L+ ++ARGG + +L + + + T++ I
Sbjct: 484 HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQI 534
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 205/466 (43%), Gaps = 49/466 (10%)
Query: 238 VLEVLGKERLLVCCLYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSS 297
++ +LG+E LL CL F M +Q S + + T L GR G + + L + +
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSR-SVFSYTALINAYGRNGRYETSLELLDRMKNE 205
Query: 298 KKFRDVHIYNAAISGLLCCGRYEDAWK----VYESMEKDNIRPDHVTCSIMVT--VMRKL 351
K + YN I+ C R W+ ++ M + I+PD VT + +++ +R L
Sbjct: 206 KISPSILTYNTVIN---ACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGL 262
Query: 352 GRSAKDAWYFFEKMNRKGV-----KWSE---------------EVLG------------- 378
G A+ F MN G+ +S ++LG
Sbjct: 263 GDEAE---MVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITS 319
Query: 379 --AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
+++++ G + A+ + +M+ G NA Y+ L++ F +S ++ LF+EMK
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMS 496
+ N P AAT+NIL+ + K V L +M + ++P +Y +I A G+
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
D A M I P+S +YT +I A+ + +E+A VAF M G PSIET+ +L
Sbjct: 440 D-ARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSL 498
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
L F R G + I ++ + + TFN ++ + + G++ EA + K
Sbjct: 499 LYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRC 558
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
P T +++ Y+ + + +EM A ++ P + Y M+
Sbjct: 559 DPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMML 604
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 145/305 (47%), Gaps = 3/305 (0%)
Query: 361 FFEKMNRK-GVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAF 419
F+ M R+ K +E + ++ EGL+ + L + EM +GV + Y L++A+
Sbjct: 127 LFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY 186
Query: 420 CKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRR-MQPKIVENLLAEMQDIGLKPT 478
++ E + L MK + + P+ T+N +++A +R + + + L AEM+ G++P
Sbjct: 187 GRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPD 246
Query: 479 ANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF 538
+Y L+SA + + D A F M GI P +Y+ L+ + EK
Sbjct: 247 IVTYNTLLSACA-IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLL 305
Query: 539 ENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQ 598
M G P I +Y LL+ + ++G + M ++ M + T+++L++ F +
Sbjct: 306 GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQS 365
Query: 599 GQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
G+Y + R + E P TYN+L+ + GG ++ L +M N++PD TY
Sbjct: 366 GRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETY 425
Query: 659 STMIY 663
+I+
Sbjct: 426 EGIIF 430
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 183/429 (42%), Gaps = 8/429 (1%)
Query: 238 VLEVLGKERLL--VCCLYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLP 295
++E GK R L VC L A SL + VL ++G + M +F +
Sbjct: 288 LVETFGKLRRLEKVCDLL---GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 296 SSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSA 355
++ + + Y+ ++ GRY+D +++ M+ N PD T +I++ V + G
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGE-GGYF 403
Query: 356 KDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
K+ F M + ++ E I+ + GL A I M + ++ Y +
Sbjct: 404 KEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGV 463
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGL 475
++AF ++ EEA F M P+ TF+ L+++++R K E +L+ + D G+
Sbjct: 464 IEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
Query: 476 KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
+++ I AY + K + A ++ M+K P + A++ YS + ++
Sbjct: 524 PRNRDTFNAQIEAYKQGGKFEE-AVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECR 582
Query: 536 VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDG- 594
FE M+ I PSI Y +L + + + ++ + M+S +V ++ G
Sbjct: 583 EQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGD 642
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
+ + V+ + G + YN L++A GQ + ++L E L P+
Sbjct: 643 YDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPE 702
Query: 655 SVTYSTMIY 663
+ +++
Sbjct: 703 LFRKNKLVW 711
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 187/414 (45%), Gaps = 4/414 (0%)
Query: 252 LYFFQWMRAQEPS---LVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNA 308
++ F+W+ S + + + +LGR L +P + DV Y
Sbjct: 156 VFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTT 215
Query: 309 AISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRK 368
+ G+YE A ++E M++ P VT ++++ V K+GRS + ++M K
Sbjct: 216 ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSK 275
Query: 369 GVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEA 428
G+K+ E ++ + EGL+ A +E++ G + YN L+ F K+ EA
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 429 EGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISA 488
+ EM+ + + T+N L+ AY R K ++ M G+ P A +YT +I A
Sbjct: 336 LSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA 395
Query: 489 YGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKP 548
YG+ K D A F MK+ G P + +Y A++ + +M+ G P
Sbjct: 396 YGKAGK-EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP 454
Query: 549 SIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVI 608
+ T+ T+L G + + ++++ M S E + TFN L+ + + G ++A +
Sbjct: 455 NRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMY 514
Query: 609 SEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
E + G + V TYN L+NA AR G ++ +M + KP +YS M+
Sbjct: 515 GEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 219/470 (46%), Gaps = 29/470 (6%)
Query: 201 GVVGEIVQLARNLPEN------LTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYF 254
GV E + + + + EN +T E +A Y KE V+E++ K+ ++
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVM------ 383
Query: 255 FQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLL 314
P+ +T T + G+AG D+ + LF ++ + + YNA +S L
Sbjct: 384 --------PNAIT---YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 315 CCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY--FFEKMNRKGVKW 372
R + K+ M+ + P+ T + M+ + G D + F +M G +
Sbjct: 433 KKSRSNEMIKMLCDMKSNGCSPNRATWNTMLAL---CGNKGMDKFVNRVFREMKSCGFEP 489
Query: 373 SEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLF 432
+ ++ ++ G A + EM + G + YN L++A + E +
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549
Query: 433 VEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQ 492
+MK+K KPT ++++++ Y++ +E + +++ + P+ L+ A +
Sbjct: 550 SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKC 609
Query: 493 KKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIET 552
+ ++ + AF KK G KP + +++ ++ + +++A E+++ +G+ P + T
Sbjct: 610 RALAG-SERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVT 668
Query: 553 YTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFG 612
Y +L+D + R G+ +I K + +++ V++N ++ GF ++G EA ++SE
Sbjct: 669 YNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Query: 613 KIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ G+ P + TYN ++ Y G +++ +++ MA + +P+ +T+ ++
Sbjct: 729 ERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVV 778
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 150/342 (43%), Gaps = 8/342 (2%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
+ L G GM + +FR + S D +N IS CG DA K+Y M +
Sbjct: 460 NTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 519
Query: 332 DNIRPDHVTCSIMVTVMRKLG--RSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGL 389
T + ++ + + G RS ++ M KG K +E +++ + G
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENV---ISDMKSKGFKPTETSYSLMLQCYAKGGN 576
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
I++ +++ +F + ++ TL+ A K + +E F K KP FN
Sbjct: 577 YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNS 636
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLK-MKK 508
++ ++R E +L +++ GL P +Y L+ Y R+ + A+ LK ++K
Sbjct: 637 MLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGEC--WKAEEILKTLEK 694
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
+KP SY +I + G ++A M GI+P I TY T + G+ G
Sbjct: 695 SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAE 754
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE 610
+ + + M ++TF ++VDG+ + G+Y EA D +S+
Sbjct: 755 IEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSK 796
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 181/360 (50%), Gaps = 2/360 (0%)
Query: 303 VHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFF 362
+ IY+ + G + V++ +++ P VT ++ + K+G+ +K A
Sbjct: 449 IAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISK-ALEVS 507
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
M +GVK + + ++ F + A + +M K+G+ + I+YN ++ AFC
Sbjct: 508 RVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGM 567
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY 482
+++ A EM+ +PT TF ++H Y++ + + M+ G PT +++
Sbjct: 568 GNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTF 627
Query: 483 TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ 542
LI+ +++M + A + +M G+ H+YT ++ Y+ G KA+ F +Q
Sbjct: 628 NGLINGLVEKRQM-EKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Query: 543 REGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYM 602
EG+ I TY LL ++G Q+ + + K M + + +NIL+DG+A++G
Sbjct: 687 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 746
Query: 603 EARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
EA D+I + K G+ P + TY ++A ++ G ++ Q ++EM AL +KP+ TY+T+I
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 171/383 (44%), Gaps = 5/383 (1%)
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRK--LGRSAKDAWYFFEKMNRKGVKWSE 374
GR D + E+ E+ R T I +++ +GR +A KM +G++ S
Sbjct: 320 GRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSL 379
Query: 375 EVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVE 434
IV F G A E ++ NA +Y ++ A C++ ++E AE L E
Sbjct: 380 VTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVRE 439
Query: 435 MKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKK 494
M+ + + A ++ +M Y+ K + +++ G PT +Y CLI+ Y + K
Sbjct: 440 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGK 499
Query: 495 MSDMAADAFLKMKKVGIKPTSHSYTALIHAY-SVSGWHEKAYVAFENMQREGIKPSIETY 553
+S A + MK+ G+K +Y+ +I+ + + W A+ FE+M +EG+KP + Y
Sbjct: 500 ISK-ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDW-ANAFAVFEDMVKEGMKPDVILY 557
Query: 554 TTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGK 613
++ F G+ ++ K M + T TF ++ G+AK G + +V +
Sbjct: 558 NNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRR 617
Query: 614 IGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXX 673
G PTV T+N L+N Q K ++L EM + + TY+ ++
Sbjct: 618 CGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGK 677
Query: 674 XXXYHKQMIKSGQVMDVDSYQKL 696
Y ++ G +D+ +Y+ L
Sbjct: 678 AFEYFTRLQNEGLDVDIFTYEAL 700
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 157/336 (46%), Gaps = 7/336 (2%)
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
FEK++ K S G +VK + G + RA M +G+ + +Y +L+ A+
Sbjct: 301 FEKIS----KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAV 356
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
++EA +MK + ++ + T+++++ +S+ + + E + I A+
Sbjct: 357 GRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASI 416
Query: 482 YTCLISAYGRQKKMSDMAADAFLK-MKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
Y +I A+ + M A+A ++ M++ GI Y ++ Y++ +K V F+
Sbjct: 417 YGKIIYAHCQTCNME--RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKR 474
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
++ G P++ TY L++ + + G +++ ++M E V+ T++++++GF K
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
+ A V + K G+ P V+ YN +++A+ G + Q +KEM L +P + T+
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 661 MIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+I+ M + G V V ++ L
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 2/220 (0%)
Query: 303 VHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFF 362
VH +N I+GL+ + E A ++ + M + + T + ++ +G + K A+ +F
Sbjct: 624 VHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGK-AFEYF 682
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
++ +G+ A++K+ C G + AL + EM + + N+ VYN L+D + +
Sbjct: 683 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARR 742
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY 482
V EA L +MK + VKP T+ + A S+ + EM+ +G+KP +Y
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 802
Query: 483 TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALI 522
T LI + R + + A + +MK +GIKP Y L+
Sbjct: 803 TTLIKGWARA-SLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 159/378 (42%), Gaps = 42/378 (11%)
Query: 263 PSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDA 322
P++VT C L L + G K + + R + ++ Y+ I+G + + +A
Sbjct: 482 PTVVT-YGC--LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 323 WKVYESMEKDNIRPDHVTCSIMVTVMRKLGR----------------------------- 353
+ V+E M K+ ++PD + + +++ +G
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 354 -----SAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSN 408
+ + F+ M R G + ++ + + +A+ I EM GV +N
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 409 AIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA--YSRRMQPKIVENL 466
Y +M + +A F ++ + + T+ L+ A S RMQ + +
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALA--V 716
Query: 467 LAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYS 526
EM + + Y LI + R+ + + AAD +MKK G+KP H+YT+ I A S
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWE-AADLIQQMKKEGVKPDIHTYTSFISACS 775
Query: 527 VSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKV 586
+G +A E M+ G+KP+I+TYTTL+ G+ RA + + ++ M + ++ K
Sbjct: 776 KAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKA 835
Query: 587 TFNILVDGFAKQGQYMEA 604
++ L+ + EA
Sbjct: 836 VYHCLLTSLLSRASIAEA 853
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 176/363 (48%), Gaps = 6/363 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV YN+ ++G+ G A + ME+ N++ D T S ++ + + G A
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG-CIDAAISL 250
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F++M KG+K S ++V+ C G + ++ +M + + N I +N L+D F K
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE--NLLAEMQDIGLKPTA 479
++EA L+ EM + + P T+N LM Y MQ ++ E N+L M P
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYC--MQNRLSEANNMLDLMVRNKCSPDI 368
Query: 480 NSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
++T LI Y K++ D F + K G+ + +Y+ L+ + SG + A F+
Sbjct: 369 VTFTSLIKGYCMVKRVDD-GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
M G+ P + TY LLDG G + ++I++ + K++ V + +++G K G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
+ +A ++ G+ P VMTY ++++ + G S+ LL++M P+ TY+
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547
Query: 660 TMI 662
T+I
Sbjct: 548 TLI 550
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 168/361 (46%), Gaps = 2/361 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
+++ N I+ C + A+ V + K PD T + ++ + G+ +A
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK-VSEAVVL 180
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
++M G + +IV C G S AL + +ME++ V ++ Y+T++D+ C+
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
++ A LF EM+ K +K + T+N L+ + + LL +M + P +
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
+ L+ + ++ K+ + A + + +M GI P +Y L+ Y + +A + M
Sbjct: 301 FNVLLDVFVKEGKLQE-ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
R P I T+T+L+ G+ MK+++ + + VT++ILV GF + G+
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
A ++ E G+ P VMTY +L++ G+ K ++ +++ + V Y+T+
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 662 I 662
I
Sbjct: 480 I 480
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 141/300 (47%), Gaps = 5/300 (1%)
Query: 399 EMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRM 458
++E G+ N N +++ FC+ A + ++ +P TFN L+ +
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLF--L 170
Query: 459 QPKIVEN--LLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSH 516
+ K+ E L+ M + G +P +Y +++ R S +A D KM++ +K
Sbjct: 171 EGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS-LALDLLRKMEERNVKADVF 229
Query: 517 SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM 576
+Y+ +I + G + A F+ M+ +GIK S+ TY +L+ G +AG + K M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 577 MSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQH 636
+S ++ +TFN+L+D F K+G+ EA ++ E G+ P ++TYN LM+ Y +
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 637 SKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
S+ +L M PD VT++++I + + K G V + +Y L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 153/334 (45%), Gaps = 3/334 (0%)
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
F +++ G+ + L ++ FC A + ++ K G + +NTL+
Sbjct: 110 FCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLF 169
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
V EA L M +P T+N +++ R + +LL +M++ +K
Sbjct: 170 LEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 229
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG-WHEKAYVAFE 539
+Y+ +I + R + D A F +M+ GIK + +Y +L+ +G W++ A + +
Sbjct: 230 TYSTIIDSLCRDGCI-DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
+ RE I P++ T+ LLD F + G Q +++K M++ + +T+N L+DG+ Q
Sbjct: 289 MVSRE-IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
+ EA +++ + P ++T+ L+ Y + ++ + ++ L ++VTYS
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Query: 660 TMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSY 693
++ ++M+ G + DV +Y
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 160/375 (42%), Gaps = 45/375 (12%)
Query: 278 LGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPD 337
L R G D + LF+ + + V YN+ + GL G++ D + + M I P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 338 HVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGV--------------------------- 370
+T ++++ V K G+ ++A +++M +G+
Sbjct: 298 VITFNVLLDVFVKEGK-LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 371 ------KWSEEVLG--AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
K S +++ +++K +C V + + + K+G+ +NA+ Y+ L+ FC+S
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPK----IVENLLAEMQDIGLKPT 478
++ AE LF EM + V P T+ IL+ + + I E+L D+G+
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM- 475
Query: 479 ANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF 538
YT +I + K+ D A + F + G+KP +YT +I G +A +
Sbjct: 476 ---YTTIIEGMCKGGKVED-AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Query: 539 ENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQ 598
M+ +G P+ TY TL+ R GD K+ + M S + +++D
Sbjct: 532 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 591
Query: 599 GQYMEARDVISEFGK 613
+ + R +S+ K
Sbjct: 592 MKRLTLRYCLSKGSK 606
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 184/397 (46%), Gaps = 39/397 (9%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWK--VYESMEKD-NIRPDHVTCSIMVT----VMRKLG-- 352
D H Y+ I GLL GR DA K V+E + NI+P C I V VM K
Sbjct: 311 DNHTYSLLIDGLLK-GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKAL 369
Query: 353 --------------------------RSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCA 386
++ + + +M ++ + S G +VK C+
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429
Query: 387 EGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAAT 446
G + A I EM G N ++Y TL+ F +++ +A + EMK + + P
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLK- 505
+N L+ S+ + + L EM + GLKP A +Y IS Y + + +AD ++K
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA--SADKYVKE 547
Query: 506 MKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGD 565
M++ G+ P T LI+ Y G +A A+ +M +GI +TYT L++G +
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 566 TQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNM 625
+I++ M + + ++ +L++GF+K G +A + E + GL P V+ YNM
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 626 LMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
L+ + R G+ K +LL EM+ L P++VTY T+I
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 183/386 (47%), Gaps = 2/386 (0%)
Query: 277 LLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRP 336
++ + G+ +K LF + +S Y + I G +++ M+K NI
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 337 DHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALII 396
T +V M G A+ ++M G + + + ++K+F A+ +
Sbjct: 416 SPYTYGTVVKGMCSSG-DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 397 QSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR 456
EM+++G+ + YN+L+ K+ ++EA VEM +KP A T+ + Y
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 457 RMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSH 516
+ + + EM++ G+ P T LI+ Y ++ K+ + A A+ M GI +
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE-ACSAYRSMVDQGILGDAK 593
Query: 517 SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM 576
+YT L++ + + A F M+ +GI P + +Y L++GF + G+ Q I+ M
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 577 MSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQH 636
+ E + + +N+L+ GF + G+ +A++++ E GLHP +TY +++ Y + G
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 637 SKLPQLLKEMAALNLKPDSVTYSTMI 662
++ +L EM L PDS Y+T++
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 197/429 (45%), Gaps = 41/429 (9%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T++ L + GD + VL + + D+ YN+ I GL R ++A M +
Sbjct: 457 TLIKTFLQNSRFGDAMRVL-KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
+ ++P+ T ++ + A A + ++M GV ++ + ++ +C +G V
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFAS-ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILM 451
A M +G+ +A Y LM+ K++ V++AE +F EM+ K + P ++ +L+
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI 511
+ +S+ + ++ EM + GL P Y L+ + R ++ + A + +M G+
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI-EKAKELLDEMSVKGL 693
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMK 571
P + +Y +I Y SG +A+ F+ M+ +G+ P YTTL+DG R D + +
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 572 IWKL------------------------------MMSEKVEGT--------KVTFNILVD 593
I+ +++ ++G+ VT+NI++D
Sbjct: 754 IFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 594 GFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKP 653
K+G A+++ + L PTV+TY L+N Y + G+ +++ + E A ++P
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Query: 654 DSVTYSTMI 662
D + YS +I
Sbjct: 874 DHIMYSVII 882
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 175/386 (45%), Gaps = 22/386 (5%)
Query: 291 FRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRK 350
+R++ D Y ++GL + +DA +++ M I PD + +++ K
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 351 LGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAI 410
LG K A F++M +G+ + + ++ FC G + +A + EM KG+ NA+
Sbjct: 640 LGNMQK-ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM 470
Y T++D +CKS + EA LF EMK K + P + + L+ R + +
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758
Query: 471 QDIGLKPTA--NSYTCLISAYGRQK-------KMSDMAADAFLKMKKVGIKPTSHSYTAL 521
+ TA N+ + +G+ + ++ D + D F KP +Y +
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-------KPNDVTYNIM 811
Query: 522 IHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKV 581
I G E A F MQ + P++ TYT+LL+G+ + G M ++ ++ +
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871
Query: 582 EGTKVTFNILVDGFAKQGQYMEARDVISE-FGK----IGLHPTVMTYNMLMNAYARGGQH 636
E + ++++++ F K+G +A ++ + F K G ++ T L++ +A+ G+
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEM 931
Query: 637 SKLPQLLKEMAALNLKPDSVTYSTMI 662
++++ M L PDS T +I
Sbjct: 932 EVAEKVMENMVRLQYIPDSATVIELI 957
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 154/348 (44%), Gaps = 9/348 (2%)
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEV 376
G+ +A Y SM I D T ++++ + K DA F +M KG+
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK-NDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
G ++ F G + +A I EM ++G+ N I+YN L+ FC+S +E+A+ L EM
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMS 496
K + P A T+ ++ Y + L EM+ GL P + YT L+ R +
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM-----QREGIKPSIE 551
A K G ++ + ALI+ G E + R G KP+
Sbjct: 750 --RAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDV 806
Query: 552 TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF 611
TY ++D + G+ + +++ M + + T +T+ L++G+ K G+ E V E
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866
Query: 612 GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
G+ P + Y++++NA+ + G +K L+ +M A N D S
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLS 914
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 153/377 (40%), Gaps = 18/377 (4%)
Query: 310 ISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKG 369
+ LL R + W VY+ M + N+ D T +++ + G
Sbjct: 193 LDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGN---------------- 236
Query: 370 VKWSEEVLGAIVKSFCAEGL-VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEA 428
V+ ++VL K F L V AL ++ M KG+ Y+ L+D CK +E+A
Sbjct: 237 VQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDA 296
Query: 429 EGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISA 488
+ L VEM + V T+++L+ + + L+ EM G+ Y C I
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICV 356
Query: 489 YGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKP 548
++ M A F M G+ P + +Y +LI Y + Y M++ I
Sbjct: 357 MSKEGVMEKAKA-LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 549 SIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVI 608
S TY T++ G +GD I K M++ V + L+ F + ++ +A V+
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 609 SEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXX 668
E + G+ P + YN L+ ++ + + L EM LKP++ TY I
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 669 XXXXXXXXYHKQMIKSG 685
Y K+M + G
Sbjct: 536 SEFASADKYVKEMRECG 552
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 158/387 (40%), Gaps = 16/387 (4%)
Query: 299 KFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDA 358
K D ++ G + G E+A V+ S + P C +++ + + R
Sbjct: 147 KSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR-LDLF 205
Query: 359 WYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDA 418
W ++ M + V + + ++ + C G V + + EK+ F A +
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE--FRTATL------- 256
Query: 419 FCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPT 478
+V+ A L M K + P T+++L+ + + + ++LL EM +G+
Sbjct: 257 -----NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311
Query: 479 ANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF 538
++Y+ LI + + +D A +M GI + Y I S G EKA F
Sbjct: 312 NHTYSLLIDGLLKGRN-ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 539 ENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQ 598
+ M G+ P + Y +L++G+ R + + ++ M + + T+ +V G
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 599 GQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
G A +++ E G P V+ Y L+ + + + ++LKEM + PD Y
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490
Query: 659 STMIYXXXXXXXXXXXXXYHKQMIKSG 685
+++I + +M+++G
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENG 517
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 181/409 (44%), Gaps = 35/409 (8%)
Query: 288 MVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTV 347
+++FR P +V YN I + GR ++A + ME PD ++ S +V
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290
Query: 348 MRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFS 407
+ G K W E M RKG+K + + G+I+ C ++ A SEM ++G+
Sbjct: 291 YCRFGELDK-VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
+ +VY TL+D FCK + A F EM ++++ P T+ ++ + + L
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 468 AEMQDIGLKPTANSYTCLISAYGRQKKMSDM----------------------------- 498
EM GL+P + ++T LI+ Y + M D
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 499 -----AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETY 553
A + +M K+G++P +Y ++++ SG E+A + G+ TY
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 554 TTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGK 613
TTL+D + ++G+ +I K M+ + ++ T VTFN+L++GF G + +++
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 614 IGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
G+ P T+N L+ Y + K+M + + PD TY ++
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 152 bits (384), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 190/400 (47%), Gaps = 11/400 (2%)
Query: 268 PRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLL-CCGRYEDAWKVY 326
PR V F +L G+ + +F + + V N ++ L C + A V+
Sbjct: 175 PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVF 234
Query: 327 ESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCA 386
+ + + + +I++ + +LGR K+A + M KG +V +C
Sbjct: 235 REFPEVGVCWNVASYNIVIHFVCQLGR-IKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 387 EGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAAT 446
G + + + M++KG+ N+ +Y +++ C+ + EAE F EM + + P
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
+ L+ + +R + EM + P +YT +IS + + M + A F +M
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE-AGKLFHEM 412
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGD- 565
G++P S ++T LI+ Y +G + A+ +M + G P++ TYTTL+DG + GD
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 566 ---TQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMT 622
+ + ++WK+ + + T+N +V+G K G EA ++ EF GL+ +T
Sbjct: 473 DSANELLHEMWKIGLQPNI----FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 623 YNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
Y LM+AY + G+ K ++LKEM L+P VT++ ++
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 159/343 (46%), Gaps = 9/343 (2%)
Query: 254 FFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMV--LFRNLPSSKKFRDVHIYNAAIS 311
FF M +++ +TP T + G +GD + LF + D + I+
Sbjct: 373 FFYEMHSRD---ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 312 GLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVK 371
G G +DA++V+ M + P+ VT + ++ + K G A +M + G++
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG-DLDSANELLHEMWKIGLQ 488
Query: 372 WSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGL 431
+ +IV C G + A+ + E E G+ ++ + Y TLMDA+CKS +++A+ +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 432 FVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGR 491
EM K ++PT TFN+LM+ + + E LL M G+ P A ++ L+ Y
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 492 QKKMSDMAADAFLK-MKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSI 550
+ + AA A K M G+ P +Y L+ + + ++A+ F+ M+ +G S+
Sbjct: 609 RNNLK--AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVD 593
TY+ L+ GF + +++ M E + K F+ D
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 181/409 (44%), Gaps = 35/409 (8%)
Query: 288 MVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTV 347
+++FR P +V YN I + GR ++A + ME PD ++ S +V
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290
Query: 348 MRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFS 407
+ G K W E M RKG+K + + G+I+ C ++ A SEM ++G+
Sbjct: 291 YCRFGELDK-VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
+ +VY TL+D FCK + A F EM ++++ P T+ ++ + + L
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 468 AEMQDIGLKPTANSYTCLISAYGRQKKMSDM----------------------------- 498
EM GL+P + ++T LI+ Y + M D
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 499 -----AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETY 553
A + +M K+G++P +Y ++++ SG E+A + G+ TY
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 554 TTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGK 613
TTL+D + ++G+ +I K M+ + ++ T VTFN+L++GF G + +++
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 614 IGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
G+ P T+N L+ Y + K+M + + PD TY ++
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 152 bits (384), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 190/400 (47%), Gaps = 11/400 (2%)
Query: 268 PRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLL-CCGRYEDAWKVY 326
PR V F +L G+ + +F + + V N ++ L C + A V+
Sbjct: 175 PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVF 234
Query: 327 ESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCA 386
+ + + + +I++ + +LGR K+A + M KG +V +C
Sbjct: 235 REFPEVGVCWNVASYNIVIHFVCQLGR-IKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 387 EGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAAT 446
G + + + M++KG+ N+ +Y +++ C+ + EAE F EM + + P
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
+ L+ + +R + EM + P +YT +IS + + M + A F +M
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE-AGKLFHEM 412
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGD- 565
G++P S ++T LI+ Y +G + A+ +M + G P++ TYTTL+DG + GD
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 566 ---TQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMT 622
+ + ++WK+ + + T+N +V+G K G EA ++ EF GL+ +T
Sbjct: 473 DSANELLHEMWKIGLQPNI----FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 623 YNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
Y LM+AY + G+ K ++LKEM L+P VT++ ++
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 159/343 (46%), Gaps = 9/343 (2%)
Query: 254 FFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMV--LFRNLPSSKKFRDVHIYNAAIS 311
FF M +++ +TP T + G +GD + LF + D + I+
Sbjct: 373 FFYEMHSRD---ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 312 GLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVK 371
G G +DA++V+ M + P+ VT + ++ + K G A +M + G++
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG-DLDSANELLHEMWKIGLQ 488
Query: 372 WSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGL 431
+ +IV C G + A+ + E E G+ ++ + Y TLMDA+CKS +++A+ +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 432 FVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGR 491
EM K ++PT TFN+LM+ + + E LL M G+ P A ++ L+ Y
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 492 QKKMSDMAADAFLK-MKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSI 550
+ + AA A K M G+ P +Y L+ + + ++A+ F+ M+ +G S+
Sbjct: 609 RNNLK--AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVD 593
TY+ L+ GF + +++ M E + K F+ D
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 194/421 (46%), Gaps = 4/421 (0%)
Query: 278 LGRAGMGDKLMVL--FRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIR 335
L R+ D +M+L ++ + K DV + N I G G A ++ + +
Sbjct: 242 LTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLS 301
Query: 336 PDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALI 395
T +++ + GR+ +A FE++ + G+K A++K + G + A
Sbjct: 302 AKTATLVSIISALADSGRTL-EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAES 360
Query: 396 IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYS 455
+ SEMEK+GV + Y+ L+DA+ + E A + EM+A +V+P + F+ L+ +
Sbjct: 361 MVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFR 420
Query: 456 RRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTS 515
R + + +L EM+ IG+KP Y +I +G+ + D A F +M GI+P
Sbjct: 421 DRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCL-DHAMTTFDRMLSEGIEPDR 479
Query: 516 HSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKL 575
++ LI + G H A FE M+R G P TY +++ + M ++
Sbjct: 480 VTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGK 539
Query: 576 MMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQ 635
M S+ + VT LVD + K G++ +A + + E +GL P+ YN L+NAYA+ G
Sbjct: 540 MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL 599
Query: 636 HSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQK 695
+ + M + LKP + +++I + M ++G DV +Y
Sbjct: 600 SEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTT 659
Query: 696 L 696
L
Sbjct: 660 L 660
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 183/396 (46%), Gaps = 3/396 (0%)
Query: 260 AQEPSLVTPRACTV-LFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
AQ L A V + L +G + LF L S YNA + G + G
Sbjct: 295 AQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGP 354
Query: 319 YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLG 378
+DA + MEK + PD T S+++ GR + A ++M V+ + V
Sbjct: 355 LKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR-WESARIVLKEMEAGDVQPNSFVFS 413
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
++ F G + + EM+ GV + YN ++D F K N ++ A F M ++
Sbjct: 414 RLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE 473
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
++P T+N L+ + + + + E + M+ G P A +Y +I++YG Q++ DM
Sbjct: 474 GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDM 533
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
KMK GI P ++T L+ Y SG A E M+ G+KPS Y L++
Sbjct: 534 KR-LLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 592
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP 618
+ + G ++ + +++M S+ ++ + + N L++ F + + EA V+ + G+ P
Sbjct: 593 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 652
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
V+TY LM A R + K+P + +EM KPD
Sbjct: 653 DVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 180/430 (41%), Gaps = 83/430 (19%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
++L LGR+ +KL F L S K+ YNA I E A + M +
Sbjct: 171 SILIHALGRS---EKLYEAF--LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQ 225
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAK-DA---WYFFEKMNRKGVKWSEEVLGAIVKSFCAE 387
D + D V S+ V++ L RS K D+ ++++ R ++ +++ I+ F
Sbjct: 226 DGYQSDFVNYSL---VIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 388 GLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATF 447
G S+AL + + G+ + +++ A S EAE LF E++
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQS--------- 333
Query: 448 NILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMK 507
G+KP +Y L+ Y + + D A +M+
Sbjct: 334 --------------------------GIKPRTRAYNALLKGYVKTGPLKD-AESMVSEME 366
Query: 508 KVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQ 567
K G+ P H+Y+ LI AY +G E A + + M+ ++P+ ++ LL GFR G+ Q
Sbjct: 367 KRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQ 426
Query: 568 TMMKIWK-----------------------------------LMMSEKVEGTKVTFNILV 592
++ K M+SE +E +VT+N L+
Sbjct: 427 KTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 486
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLK 652
D K G+++ A ++ + G P TYN+++N+Y + + +LL +M + +
Sbjct: 487 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546
Query: 653 PDSVTYSTMI 662
P+ VT++T++
Sbjct: 547 PNVVTHTTLV 556
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 4/261 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D YN I + A ++ M + I PD VT + ++ K GR A
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV-AEEM 501
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
FE M R+G ++ S+ + + +M+ +G+ N + + TL+D + K
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
S +A EMK+ +KP++ +N L++AY++R + N M GLKP+ +
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 621
Query: 482 YTCLISAYGRQKKMSDMAADAFLK-MKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
LI+A+G ++ D A A L+ MK+ G+KP +YT L+ A +K V +E
Sbjct: 622 LNSLINAFGEDRR--DAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEE 679
Query: 541 MQREGIKPSIETYTTLLDGFR 561
M G KP + + L R
Sbjct: 680 MIMSGCKPDRKARSMLRSALR 700
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 194/398 (48%), Gaps = 6/398 (1%)
Query: 302 DVHI--YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAW 359
DV+I YN I GL + +A + + + +++PD VT +V + K+ + +
Sbjct: 259 DVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV-QEFEIGL 317
Query: 360 YFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAF 419
++M SE + ++V+ G + AL + + GV N VYN L+D+
Sbjct: 318 EMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377
Query: 420 CKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTA 479
CK EAE LF M ++P T++IL+ + RR + + L EM D GLK +
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 480 NSYTCLISAYGRQKKMSDMAADAFL-KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF 538
Y LI+ + + +S AA+ F+ +M ++PT +YT+L+ Y G KA +
Sbjct: 438 YPYNSLINGHCKFGDIS--AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495
Query: 539 ENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQ 598
M +GI PSI T+TTLL G RAG + +K++ M V+ +VT+N++++G+ ++
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555
Query: 599 GQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
G +A + + E + G+ P +Y L++ GQ S+ + + N + + + Y
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615
Query: 659 STMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+ +++ ++M++ G +D+ Y L
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVL 653
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 188/427 (44%), Gaps = 7/427 (1%)
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
EP++VT T L G +K + L+ + ++ + +SGL G D
Sbjct: 469 EPTVVTY---TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIV 381
A K++ M + N++P+ VT ++M+ + G +K A+ F ++M KG+ ++
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK-AFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 382 KSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK 441
C G S A + + K N I Y L+ FC+ +EEA + EM + V
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
+ +L+ + K+ LL EM D GLKP YT +I A + + A
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE-AFG 703
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFR 561
+ M G P +YTA+I+ +G+ +A V MQ P+ TY LD
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763
Query: 562 RAG-DTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTV 620
+ D Q +++ ++ + T T+N+L+ GF +QG+ EA ++I+ G+ P
Sbjct: 764 KGEVDMQKAVELHNAILKGLLANT-ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822
Query: 621 MTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQ 680
+TY ++N R K +L M ++PD V Y+T+I+ +
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 681 MIKSGQV 687
M++ G +
Sbjct: 883 MLRQGLI 889
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 170/363 (46%), Gaps = 6/363 (1%)
Query: 302 DVHIYNAAISGLLCCGR-YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY 360
++ +YNA I L C GR + +A +++ M K +RP+ VT SI++ + + G+ A
Sbjct: 366 NLFVYNALIDSL-CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK-LDTALS 423
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
F +M G+K S +++ C G +S A +EM K + + Y +LM +C
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
+ +A L+ EM K + P+ TF L+ R + L EM + +KP
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 481 SYTCLISAYGRQKKMSDMAADAFLK-MKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
+Y +I Y + MS A FLK M + GI P ++SY LIH ++G +A V +
Sbjct: 544 TYNVMIEGYCEEGDMS--KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
+ + + + YT LL GF R G + + + + M+ V+ V + +L+DG K
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
++ E GL P + Y +++A ++ G + + M P+ VTY+
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721
Query: 660 TMI 662
+I
Sbjct: 722 AVI 724
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 165/374 (44%), Gaps = 36/374 (9%)
Query: 358 AWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMD 417
A F M G++ + +++S C +SRA + + ME G N + YN L+D
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 418 AFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR--------------------- 456
CK V EA G+ ++ K++KP T+ L++ +
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 457 ------------RMQPKIVE--NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADA 502
R + KI E NL+ + D G+ P Y LI + + +K + A
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE-AELL 389
Query: 503 FLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR 562
F +M K+G++P +Y+ LI + G + A M G+K S+ Y +L++G +
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 563 AGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMT 622
GD M+++K+E T VT+ L+ G+ +G+ +A + E G+ P++ T
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 623 YNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMI 682
+ L++ R G +L EMA N+KP+ VTY+ MI + K+M
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 683 KSGQVMDVDSYQKL 696
+ G V D SY+ L
Sbjct: 570 EKGIVPDTYSYRPL 583
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 125/286 (43%), Gaps = 2/286 (0%)
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAK-NVKPTAATFNILMHAYSRRMQPKIVENLLAEM 470
++ L+ + +S V + +F M K ++ P T + L+H + + L +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 471 QDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW 530
+G++P YT +I + K +S A + M+ G Y LI
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLS-RAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 531 HEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI 590
+A +++ + +KP + TY TL+ G + + + +++ M+ + ++ +
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 591 LVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN 650
LV+G K+G+ EA +++ G+ P + YN L+++ +G + + L M +
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 651 LKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
L+P+ VTYS +I + +M+ +G + V Y L
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 94/238 (39%), Gaps = 52/238 (21%)
Query: 443 TAATFNILMHAYSR-----------------RMQPKIVENLLAEMQDIGLKPTANSYTCL 485
+ A+F IL+HA + ++P V N+L + +++S+ L
Sbjct: 103 STASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSSFDLL 162
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
I Y R +++ D + + KV + P + +AL+H A F +M G
Sbjct: 163 IQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVG 222
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
I+P + YT ++ D ++ M + + V +N+L+DG K+ + EA
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA- 281
Query: 606 DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
+G+ K++A +LKPD VTY T++Y
Sbjct: 282 --------VGIK--------------------------KDLAGKDLKPDVVTYCTLVY 305
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 200/467 (42%), Gaps = 37/467 (7%)
Query: 266 VTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKV 325
V+ AC L L R G + +++ + S +V+ N ++ L G+ E
Sbjct: 198 VSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTF 257
Query: 326 YESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFC 385
+++ + PD VT + +++ G ++A+ M KG ++ C
Sbjct: 258 LSQVQEKGVYPDIVTYNTLISAYSSKGL-MEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 386 AEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAA 445
G RA + +EM + G+ ++ Y +L+ CK V E E +F +M++++V P
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376
Query: 446 TFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQ------------- 492
F+ +M ++R +++ GL P YT LI Y R+
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 493 ---------------------KKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
+KM A F +M + + P S++ T LI + G
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
+ A F+ M+ + I+ + TY TLLDGF + GD T +IW M+S+++ T ++++IL
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
V+ +G EA V E + PTVM N ++ Y R G S L++M +
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 652 KPDSVTYSTMIYXXXXXXXXXXXXXYHKQM--IKSGQVMDVDSYQKL 696
PD ++Y+T+IY K+M + G V DV +Y +
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSI 663
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 198/441 (44%), Gaps = 39/441 (8%)
Query: 282 GMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDA------------------- 322
G+ ++ L +P V+ YN I+GL G+YE A
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 323 ----------------WKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMN 366
KV+ M ++ PD V S M+++ + G K A +F +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK-ALMYFNSVK 402
Query: 367 RKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVE 426
G+ + +++ +C +G++S A+ +++EM ++G + + YNT++ CK +
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 427 EAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLI 486
EA+ LF EM + + P + T IL+ + + + L +M++ ++ +Y L+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 487 SAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGI 546
+G+ + D A + + M I PT SY+ L++A G +A+ ++ M + I
Sbjct: 523 DGFGKVGDI-DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 547 KPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARD 606
KP++ +++ G+ R+G+ + M+SE +++N L+ GF ++ +A
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641
Query: 607 VIS--EFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYX 664
++ E + GL P V TYN +++ + R Q + +L++M + PD TY+ MI
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Query: 665 XXXXXXXXXXXXYHKQMIKSG 685
H +M++ G
Sbjct: 702 FVSQDNLTEAFRIHDEMLQRG 722
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 165/372 (44%), Gaps = 17/372 (4%)
Query: 255 FQWMRAQE--PSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISG 312
F MR+++ P LV + LF R+G DK ++ F ++ + D IY I G
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFT---RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 313 LLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRK---LGRSAKDAWYFFEKMNRKG 369
G A + M + D VT + ++ + K LG + K F +M +
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK----LFNEMTERA 475
Query: 370 VKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAE 429
+ L ++ C G + A+ + +M++K + + + YNTL+D F K ++ A+
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 430 GLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY 489
++ +M +K + PT +++IL++A + + EM +KPT +I Y
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGY 595
Query: 490 GRQKKMSDMAADAFL-KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE--GI 546
R SD ++FL KM G P SY LI+ + KA+ + M+ E G+
Sbjct: 596 CRSGNASD--GESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGL 653
Query: 547 KPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARD 606
P + TY ++L GF R + + + M+ V + T+ +++GF Q EA
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713
Query: 607 VISEFGKIGLHP 618
+ E + G P
Sbjct: 714 IHDEMLQRGFSP 725
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 140/311 (45%), Gaps = 1/311 (0%)
Query: 352 GRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIV 411
R ++A F + KG S + A++ S G V A + E+ + GV N
Sbjct: 178 ARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYT 237
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
N +++A CK +E+ +++ K V P T+N L+ AYS + + L+ M
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
G P +Y +I+ + K + A + F +M + G+ P S +Y +L+ G
Sbjct: 298 GKGFSPGVYTYNTVINGLCKHGKY-ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDV 356
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
+ F +M+ + P + +++++ F R+G+ + + + + V + IL
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
+ G+ ++G A ++ +E + G V+TYN +++ + + +L EM L
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 652 KPDSVTYSTMI 662
PDS T + +I
Sbjct: 477 FPDSYTLTILI 487
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 151/348 (43%), Gaps = 19/348 (5%)
Query: 333 NIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSF--CAEGLV 390
N + ++ S M+ ++ + GR + + R GV E++ ++ +F C
Sbjct: 108 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVS-RLEIVNSLDSTFSNCGSNDS 166
Query: 391 SRALIIQSEME---------------KKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM 435
L+I++ ++ KG + N L+ + + VE A G++ E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 436 KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
V T NI+++A + + + V L+++Q+ G+ P +Y LISAY + M
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 496 SDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTT 555
+ A + M G P ++Y +I+ G +E+A F M R G+ P TY +
Sbjct: 287 EE-AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 556 LLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIG 615
LL + GD K++ M S V V F+ ++ F + G +A + + G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 616 LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
L P + Y +L+ Y R G S L EM D VTY+T+++
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 109/251 (43%), Gaps = 1/251 (0%)
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
N + F++L+ Y + + + ++ G + ++ LI + R + ++
Sbjct: 160 NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWV-EL 218
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
A + ++ + G+ ++ +++A G EK +Q +G+ P I TY TL+
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP 618
+ G + ++ M + T+N +++G K G+Y A++V +E + GL P
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYH 678
TY L+ + G + ++ +M + ++ PD V +S+M+ Y
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 679 KQMIKSGQVMD 689
+ ++G + D
Sbjct: 399 NSVKEAGLIPD 409
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 188/402 (46%), Gaps = 11/402 (2%)
Query: 259 RAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
R +P+LVT V+ L + G D + L + ++K DV I+N I L
Sbjct: 219 RGCQPNLVTY---GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 319 YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLG 378
+DA +++ ME IRP+ VT S +++ + GR + DA M K + +
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS-DASQLLSDMIEKKINPNLVTFN 334
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
A++ +F EG A + +M K+ + + YN+L++ FC + +++A+ +F M +K
Sbjct: 335 ALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
+ P T+N L+ + + + + L EM GL +YT LI D
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD-CDN 453
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
A F +M G+ P +Y+ L+ +G EKA F+ MQ+ IK I YTT+++
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTK---VTFNILVDGFAKQGQYMEARDVISEFGKIG 615
G +AG W L S ++G K VT+N ++ G + EA ++ + + G
Sbjct: 514 GMCKAGKVDDG---WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 616 LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
P TYN L+ A+ R G + +L++EM + D+ T
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 166/357 (46%), Gaps = 2/357 (0%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
Y ++GL G + A + ME I D V + ++ + K R DA F++M
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY-RHVDDALNLFKEM 286
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
KG++ + +++ C+ G S A + S+M +K + N + +N L+DAF K
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
EAE L+ +M +++ P T+N L++ + + + + M P +Y L
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
I + + K++ D + F +M G+ + +YT LI G + A F+ M +G
Sbjct: 407 IKGFCKSKRVED-GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
+ P I TY+ LLDG G + ++++ M +++ + +++G K G+ +
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 606 DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
D+ G+ P V+TYN +++ + LLK+M P+S TY+T+I
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 168/379 (44%), Gaps = 2/379 (0%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
+ +DA ++ M K P V + +++ + K+ + EKM R +
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKM-KKFDVVISLGEKMQRLEIVHGLYTY 123
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
++ FC +S AL + +M K G + + ++L++ +C + +A L +M
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
+P TF L+H + L+ M G +P +Y +++ ++ +D
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD-TD 242
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
+A + KM+ I+ + +I + + A F+ M+ +GI+P++ TY++L+
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
G ++ M+ +K+ VTFN L+D F K+G+++EA + + K +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXY 677
P + TYN L+N + + K Q+ + M + + PD VTY+T+I
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 678 HKQMIKSGQVMDVDSYQKL 696
++M G V D +Y L
Sbjct: 423 FREMSHRGLVGDTVTYTTL 441
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 181/412 (43%), Gaps = 2/412 (0%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D + LF + S+ + +N +S + +++ + E M++ I T +I+
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ + + + A KM + G + S L +++ +C +S A+ + +M + G
Sbjct: 127 INCFCRRSQISL-ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
+ I + TL+ N EA L M + +P T+ ++++ +R +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
NLL +M+ ++ + +I + + + + D A + F +M+ GI+P +Y++LI
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD-ALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
G A +M + I P++ T+ L+D F + G K++ M+ ++
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
T+N LV+GF + +A+ + P V+TYN L+ + + + +L +
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 645 EMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
EM+ L D+VTY+T+I KQM+ G D+ +Y L
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 137/348 (39%), Gaps = 39/348 (11%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D + LF+ + + +V Y++ IS L GR+ DA ++ M + I P+ VT + +
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ K G+ +A ++ M ++ + ++V FC + +A + M K
Sbjct: 337 IDAFVKEGKFV-EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
F + + YNTL+ FCKS VE+ LF EM + + T+ L+ +
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMS---------------------------- 496
+ +M G+ P +Y+ L+ K+
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 497 ------DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSI 550
D D F + G+KP +Y +I ++AY + M+ +G P+
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTF----NILVDG 594
TY TL+ R GD ++ + M S + G T N+L DG
Sbjct: 576 GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 623
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 1/179 (0%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T L L G D +F+ + S D+ Y+ + GL G+ E A +V++ M+K
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
I+ D + M+ M K G+ D W F ++ KGVK + ++ C++ L+
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGK-VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 557
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
A + +M++ G N+ YNTL+ A + + L EM++ A+T ++
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 171/324 (52%), Gaps = 2/324 (0%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
Y I+GL G + +++YE M++D + P+ T + ++ + K GR+ KDA+ F++M
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT-KDAFQVFDEM 294
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
+GV + ++ C E ++ A + +M+ G+ N I YNTL+D FC +
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
+A L ++K++ + P+ T+NIL+ + R+ ++ EM++ G+KP+ +YT L
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
I + R M + A L M+++G+ P H+Y+ LIH + + G +A F++M +
Sbjct: 415 IDTFARSDNM-EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
+P+ Y T++ G+ + G + +K+ K M +++ ++ +++ K+ + EA
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 606 DVISEFGKIGLHPTVMTYNMLMNA 629
++ + G+ P+ +++ A
Sbjct: 534 RLVEKMIDSGIDPSTSILSLISRA 557
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 154/313 (49%), Gaps = 1/313 (0%)
Query: 351 LGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAI 410
+G S+ + W+ F N+ V G ++K C G + ++ + E+ + G N +
Sbjct: 140 VGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVV 199
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM 470
+Y TL+D CK +E+A+ LF EM + T+ +L++ + K + +M
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM 259
Query: 471 QDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW 530
Q+ G+ P +Y C+++ + + D A F +M++ G+ +Y LI
Sbjct: 260 QEDGVFPNLYTYNCVMNQLCKDGRTKD-AFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 531 HEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI 590
+A + M+ +GI P++ TY TL+DGF G + + + + S + + VT+NI
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 591 LVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN 650
LV GF ++G A ++ E + G+ P+ +TY +L++ +AR K QL M L
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 651 LKPDSVTYSTMIY 663
L PD TYS +I+
Sbjct: 439 LVPDVHTYSVLIH 451
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 172/360 (47%), Gaps = 6/360 (1%)
Query: 302 DVHIYNAAISGLLCC--GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAW 359
+V IY I G CC G E A ++ M K + + T ++++ + K G K +
Sbjct: 197 NVVIYTTLIDG--CCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNG-VKKQGF 253
Query: 360 YFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAF 419
+EKM GV + ++ C +G A + EM ++GV N + YNTL+
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 420 CKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTA 479
C+ + EA + +MK+ + P T+N L+ + + +L +++ GL P+
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 480 NSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
+Y L+S + R+ S AA +M++ GIKP+ +YT LI ++ S EKA
Sbjct: 374 VTYNILVSGFCRKGDTSG-AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
+M+ G+ P + TY+ L+ GF G +++K M+ + E +V +N ++ G+ K+G
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
A ++ E + L P V +Y ++ + + + +L+++M + P + S
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 173/367 (47%), Gaps = 3/367 (0%)
Query: 297 SKKFR-DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSA 355
SK F D YN I L G+ + A KV + DN +P +T +I++ G
Sbjct: 186 SKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG-GV 244
Query: 356 KDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
+A ++M +G+K I++ C EG+V RA + +E KG + I YN L
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGL 475
+ A EE E L +M ++ P T++IL+ R + + NLL M++ GL
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 476 KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
P A SY LI+A+ R+ ++ D+A + M G P +Y ++ +G ++A
Sbjct: 365 TPDAYSYDPLIAAFCREGRL-DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 536 VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGF 595
F + G P+ +Y T+ +GD + + MMS ++ ++T+N ++
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 596 AKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDS 655
++G EA +++ + HP+V+TYN+++ + + + +L+ M +P+
Sbjct: 484 CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNE 543
Query: 656 VTYSTMI 662
TY+ +I
Sbjct: 544 TTYTVLI 550
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 153/346 (44%), Gaps = 38/346 (10%)
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEV 376
G Y ++ + E+M + PD + C+
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCT---------------------------------- 128
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
++K F + +A+ + +EK G + YN L++ FCK N +++A + M+
Sbjct: 129 --KLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMR 185
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMS 496
+K+ P T+NI++ + R + + +L ++ +PT +YT LI A + +
Sbjct: 186 SKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV- 244
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
D A +M G+KP +Y +I G ++A+ N++ +G +P + +Y L
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
L G + K+ M SEK + VT++IL+ + G+ EA +++ + GL
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
P +Y+ L+ A+ R G+ + L+ M + PD V Y+T++
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 157/381 (41%), Gaps = 46/381 (12%)
Query: 291 FRNLPSS-------KKFR--DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTC 341
RN+P + +KF DV YNA I+G R +DA +V + M + PD VT
Sbjct: 137 LRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196
Query: 342 SIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEME 401
+IM+ S C+ G + AL + +++
Sbjct: 197 NIMI------------------------------------GSLCSRGKLDLALKVLNQLL 220
Query: 402 KKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPK 461
I Y L++A V+EA L EM ++ +KP T+N ++ +
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 462 IVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAL 521
++ ++ G +P SY L+ A Q K + KM P +Y+ L
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE-GEKLMTKMFSEKCDPNVVTYSIL 339
Query: 522 IHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKV 581
I G E+A + M+ +G+ P +Y L+ F R G ++ + M+S+
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 582 EGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQ 641
V +N ++ K G+ +A ++ + G++G P +YN + +A G +
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 642 LLKEMAALNLKPDSVTYSTMI 662
++ EM + + PD +TY++MI
Sbjct: 460 MILEMMSNGIDPDEITYNSMI 480
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 155/359 (43%), Gaps = 39/359 (10%)
Query: 344 MVTVMRKLGRSAK--DAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEME 401
M+ + + RS ++ + E M RKG + ++K F + +A+ + +E
Sbjct: 92 MLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILE 151
Query: 402 KKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPK 461
K G + YN L++ FCK N +++A + M++K+ P T+NI++ + R +
Sbjct: 152 KFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 462 IVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAL 521
+ +L ++ +SD +PT +YT L
Sbjct: 211 LALKVLNQL------------------------LSD------------NCQPTVITYTIL 234
Query: 522 IHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKV 581
I A + G ++A + M G+KP + TY T++ G + G ++ + + +
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGC 294
Query: 582 EGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQ 641
E +++NIL+ QG++ E ++++ P V+TY++L+ R G+ +
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 642 LLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKLRAIL 700
LLK M L PD+ +Y +I + + MI G + D+ +Y + A L
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 4/229 (1%)
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
+P++VT ++L L R G ++ M L + + D + Y+ I+ GR +
Sbjct: 330 DPNVVTY---SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIV 381
A + E+M D PD V + ++ + K G+ A A F K+ G + +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGK-ADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 382 KSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK 441
+ + G RAL + EM G+ + I YN+++ C+ V+EA L V+M++
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYG 490
P+ T+NI++ + + + + N+L M G +P +YT LI G
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 180/394 (45%), Gaps = 9/394 (2%)
Query: 271 CTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESME 330
CT L R G K + L S DV YN ISG G +A V + M
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM- 198
Query: 331 KDNIRPDHVTCSIMVTVMRKLGRSAK--DAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEG 388
++ PD VT + T++R L S K A ++M ++ ++++ C +
Sbjct: 199 --SVSPDVVTYN---TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
V A+ + EM +G + + YN L++ CK ++EA +M + +P T N
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK 508
I++ + + E LLA+M G P+ ++ LI+ R K + A D KM +
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR-KGLLGRAIDILEKMPQ 372
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
G +P S SY L+H + ++A E M G P I TY T+L + G +
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMN 628
++I + S+ +T+N ++DG AK G+ +A ++ E L P +TY+ L+
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 629 AYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+R G+ + + E + ++P++VT+++++
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 169/362 (46%), Gaps = 4/362 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMV-TVMRKLGRSAKDAWY 360
DV YN + L G+ + A +V + M + + PD +T +I++ R G A
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG--VGHAMK 260
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
++M +G +V C EG + A+ ++M G N I +N ++ + C
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
+ +AE L +M K P+ TFNIL++ R+ ++L +M G +P +
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
SY L+ + ++KKM D A + +M G P +Y ++ A G E A
Sbjct: 381 SYNPLLHGFCKEKKM-DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
+ +G P + TY T++DG +AG T +K+ M ++ ++ +T++ LV G +++G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
EA EF ++G+ P +T+N +M + Q + L M KP+ +Y+
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 661 MI 662
+I
Sbjct: 560 LI 561
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 176/378 (46%), Gaps = 17/378 (4%)
Query: 288 MVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTV 347
MV N+P D+ I G G+ A K+ E +E PD +T ++M++
Sbjct: 128 MVYHGNVP------DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISG 181
Query: 348 MRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFS 407
K G +A ++M+ V I++S C G + +A+ + M ++ +
Sbjct: 182 YCKAGE-INNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
+ I Y L++A C+ + V A L EM+ + P T+N+L++ + + L
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 468 AEMQDIGLKPTANSYTCLI---SAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
+M G +P ++ ++ + GR + AD M + G P+ ++ LI+
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD----MLRKGFSPSVVTFNILINF 353
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
G +A E M + G +P+ +Y LL GF + ++ + M+S
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
VT+N ++ K G+ +A +++++ G P ++TYN +++ A+ G+ K +LL
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 645 EMAALNLKPDSVTYSTMI 662
EM A +LKPD++TYS+++
Sbjct: 474 EMRAKDLKPDTITYSSLV 491
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 140/319 (43%), Gaps = 14/319 (4%)
Query: 392 RALIIQSEMEKKGVFSNAIVYN----------TLMDAFCKSNHVEEAEGLFVEMKAKNVK 441
R ++ E+E+ F +VY+ TL+ FC+ +A + ++
Sbjct: 110 RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 169
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
P T+N+++ Y + + + N L+ + + + P +Y ++ + K+ A +
Sbjct: 170 PDVITYNVMISGYCKAGE---INNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ-AME 225
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFR 561
+M + P +YT LI A A + M+ G P + TY L++G
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 562 RAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVM 621
+ G +K M S + +T NI++ G++M+A ++++ + G P+V+
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 622 TYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQM 681
T+N+L+N R G + +L++M +P+S++Y+ +++ Y ++M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 682 IKSGQVMDVDSYQKLRAIL 700
+ G D+ +Y + L
Sbjct: 406 VSRGCYPDIVTYNTMLTAL 424
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 187/402 (46%), Gaps = 11/402 (2%)
Query: 259 RAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
R +P+LVT V+ L + G D L + ++K DV I+N I L
Sbjct: 144 RGCQPNLVTY---GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 319 YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLG 378
+DA +++ ME IRP+ VT S +++ + GR + DA M K + +
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS-DASQLLSDMIEKKINPNLVTFN 259
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
A++ +F EG A + +M K+ + + YN+L++ FC + +++A+ +F M +K
Sbjct: 260 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
+ P T+N L+ + + + + L EM GL +YT LI D
Sbjct: 320 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD-CDN 378
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
A F +M G+ P +Y+ L+ +G EKA F+ MQ+ IK I YTT+++
Sbjct: 379 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTK---VTFNILVDGFAKQGQYMEARDVISEFGKIG 615
G +AG W L S ++G K VT+N ++ G + EA ++ + + G
Sbjct: 439 GMCKAGKVDDG---WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 616 LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
P TYN L+ A+ R G + +L++EM + D+ T
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 537
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 169/345 (48%), Gaps = 2/345 (0%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
R DA + + M + RPD +T + ++ + L A +A ++M ++G + +
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLF-LHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
G +V C G + A + ++ME + ++ +++NT++D+ CK HV++A LF EM+
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
K ++P T++ L+ + LL++M + + P ++ LI A+ ++ K +
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
A M K I P +Y +LI+ + + +KA FE M + P ++TY TL+
Sbjct: 274 -AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
GF ++ + ++++ M + G VT+ L+ G G A+ V + G+
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
P +MTY++L++ G+ K ++ M +K D Y+TMI
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 167/357 (46%), Gaps = 2/357 (0%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
Y ++GL G + A+ + ME I D V + ++ + K R DA F++M
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY-RHVDDALNLFKEM 211
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
KG++ + +++ C+ G S A + S+M +K + N + +N L+DAF K
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
EAE L +M +++ P T+N L++ + + + + M P ++Y L
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
I + + K++ D + F +M G+ + +YT LI G + A F+ M +G
Sbjct: 332 IKGFCKSKRVED-GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
+ P I TY+ LLDG G + ++++ M +++ + +++G K G+ +
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 606 DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
D+ G+ P V+TYN +++ + LLK+M PDS TY+T+I
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 151/334 (45%), Gaps = 1/334 (0%)
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
EKM R G+ + ++ FC +S AL + +M K G + + ++L++ +C
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY 482
+ +A L +M +P TF L+H + L+ M G +P +Y
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 483 TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ 542
+++ ++ + D+A + KM+ I+ + +I + + A F+ M+
Sbjct: 154 GVVVNGLCKRGDI-DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 543 REGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYM 602
+GI+P++ TY++L+ G ++ M+ +K+ VTFN L+D F K+G+++
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 603 EARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
EA + + K + P + TYN L+N + + K Q+ + M + + PD TY+T+I
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 663 YXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
++M G V D +Y L
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 134/285 (47%), Gaps = 1/285 (0%)
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
+N L+ A K + L +M+ + T+NIL++ + RR Q + LL +M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
+G +P+ + + L++ Y K++SD A +M ++G +P + ++T LIH +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVA-LVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
+A + M + G +P++ TY +++G + GD + M + K+E V FN +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
+D K +A ++ E G+ P V+TY+ L++ G+ S QLL +M +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 652 KPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
P+ VT++ +I H MIK D+ +Y L
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 151/363 (41%), Gaps = 11/363 (3%)
Query: 238 VLEVLGKERLLVCCLYFFQWMRAQ--EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLP 295
+++ L K R + L F+ M + P++VT + GR +L+ ++
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL---SDMI 247
Query: 296 SSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSA 355
K ++ +NA I + G++ +A K+++ M K +I PD T + ++ R
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 356 KDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
K A FE M K + ++K FC V + EM +G+ + + Y TL
Sbjct: 308 K-AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGL 475
+ + A+ +F +M + V P T++IL+ + + + MQ +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 476 KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
K YT +I + K+ D D F + G+KP +Y +I ++AY
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDD-GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 536 VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTF----NIL 591
+ M+ +G P TY TL+ R GD ++ + M S + G T N+L
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
Query: 592 VDG 594
DG
Sbjct: 546 HDG 548
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 187/416 (44%), Gaps = 7/416 (1%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
L L R G+ D++ ++ + K +++ YN ++G G E+A + + +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 332 DNIRPDHVTCS--IMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGL 389
+ PD T + IM RK A+ F +M KG + +E ++ C
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRK---DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
+ A+ + +M+ F Y L+ + C S EA L EM+ +KP T+ +
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
L+ + + + + LL +M + GL P +Y LI+ Y ++ + D A D M+
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIED-AVDVVELMESR 422
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
+ P + +Y LI Y S H KA M + P + TY +L+DG R+G+ +
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
++ LM + + T+ ++D K + EA D+ + G++P V+ Y L++
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSG 685
Y + G+ + +L++M + N P+S+T++ +I+ ++M+K G
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 180/378 (47%), Gaps = 3/378 (0%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D +F +P R+ Y I GL R ++A ++ M+ D P T +++
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ + R + +A ++M G+K + ++ S C++ +A + +M +KG
Sbjct: 330 IKSLCGSERKS-EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
+ N I YN L++ +CK +E+A + M+++ + P T+N L+ Y + K +
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAM- 447
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
+L +M + + P +Y LI R D A M G+ P +YT++I +
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNF-DSAYRLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
S E+A F++++++G+ P++ YT L+DG+ +AG + + M+S+
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
+TFN L+ G G+ EA + + KIGL PTV T +L++ + G +
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 645 EMAALNLKPDSVTYSTMI 662
+M + KPD+ TY+T I
Sbjct: 627 QMLSSGTKPDAHTYTTFI 644
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 183/413 (44%), Gaps = 38/413 (9%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D+ M LF + + F V Y I L R +A + + ME+ I+P+ T +++
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ + + K A +M KG+ + A++ +C G++ A+ + ME +
Sbjct: 365 IDSLCSQCKFEK-ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
+ N YN L+ +CKSN V +A G+ +M + V P T+N L+ R
Sbjct: 424 LSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPT---------- 514
LL+ M D GL P +YT +I + + K++ + A D F +++ G+ P
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE-ACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 515 -------------------------SHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPS 549
S ++ ALIH G ++A + E M + G++P+
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 550 IETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVIS 609
+ T T L+ + GD ++ M+S + T+ + + ++G+ ++A D+++
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 610 EFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ + G+ P + TY+ L+ Y GQ + +LK M +P T+ ++I
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 128/251 (50%), Gaps = 1/251 (0%)
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
YNTL+++ + V+E + +++EM V P T+N +++ Y + + ++++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
+ GL P +YT LI Y ++K + D A F +M G + +YT LIH V+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDL-DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
++A F M+ + P++ TYT L+ + + + K M ++ T+ +L
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
+D Q ++ +AR+++ + + GL P V+TYN L+N Y + G +++ M + L
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 652 KPDSVTYSTMI 662
P++ TY+ +I
Sbjct: 425 SPNTRTYNELI 435
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 160/393 (40%), Gaps = 54/393 (13%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
LF +L +V +Y A I G G+ ++A + E M N P+ +T + ++ +
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
G+ K+A EKM + G++ + ++ +G A +M G +A
Sbjct: 579 ADGK-LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
Y T + +C+ + +AE + +M+ V P T++ L+ Y Q ++L
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 470 MQDIGLKPTANSYTCLIS-----AYGRQK-------KMSDM-----AADAFLKMKKVGIK 512
M+D G +P+ +++ LI YG+QK MS+M + KM + +
Sbjct: 698 MRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVT 757
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQR-EGIKPS---------------------- 549
P + SY LI G A F++MQR EGI PS
Sbjct: 758 PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAK 817
Query: 550 -------------IETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFA 596
+E+ L+ G + G+ + +++ ++ ++ + I++DG
Sbjct: 818 VVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVG 877
Query: 597 KQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
KQG ++ + K G + TY++L+
Sbjct: 878 KQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 148/376 (39%), Gaps = 54/376 (14%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T L +AG D+ ++ + S + +NA I GL G+ ++A + E M K
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
++P T +I++ + K G A+ F++M G K ++++C EG +
Sbjct: 596 IGLQPTVSTDTILIHRLLKDG-DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATF-NIL 450
A + ++M + GV + Y++L+ + A + M+ +P+ TF +++
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Query: 451 MH-----------------AYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQK 493
H A S M+ V LL +M + + P A SY LI
Sbjct: 715 KHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVG 774
Query: 494 KM------------------SDMAADAFL----KMKK-------------VGIKPTSHSY 518
+ S++ +A L K+KK VG P S
Sbjct: 775 NLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESC 834
Query: 519 TALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMS 578
LI G E+ F+N+ + G + ++DG + G + +++ +M
Sbjct: 835 KVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894
Query: 579 EKVEGTKVTFNILVDG 594
+ + T+++L++G
Sbjct: 895 NGCKFSSQTYSLLIEG 910
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 550 IETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVIS 609
I Y TLL+ R G M +++ M+ +KV T+N +V+G+ K G EA +S
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 610 EFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
+ + GL P TY L+ Y + ++ EM + + V Y+ +I+
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIH 296
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 173/352 (49%), Gaps = 2/352 (0%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
Y ++GL G + A+ + ME I + V S ++ + K R DA F +M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKY-RHEDDALNLFTEM 286
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
KGV+ + +++ C S A + S+M ++ + N + +N L+DAF K +
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
EAE L+ EM +++ P T++ L++ + + +++ M P +Y L
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
I+ + + K++ D + F +M + G+ + +YT LIH + + + A + F+ M +G
Sbjct: 407 INGFCKAKRI-DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
+ P+I TY TLLDG + G + M +++ + K+E T T+NI+++G K G+ +
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 606 DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
D+ G+ P V+ YN +++ + R G + L ++M PDS T
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 178/380 (46%), Gaps = 37/380 (9%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
R DA + + M + RPD +T + ++ + L A +A ++M ++G + +
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLF-LHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
G +V C G + A + ++ME + +N ++Y+T++D+ CK H ++A LF EM+
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
K V+P T++ L+ + LL++M + + P ++ LI A+ ++ K+ +
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE------------------ 539
A + +M K I P +Y++LI+ + + ++A FE
Sbjct: 349 -AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 540 -----------------NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVE 582
M + G+ + TYTTL+ GF +A D ++K M+S+ V
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 583 GTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQL 642
+T+N L+DG K G+ +A V + + PT+ TYN+++ + G+ L
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 643 LKEMAALNLKPDSVTYSTMI 662
++ +KPD + Y+TMI
Sbjct: 528 FCSLSLKGVKPDVIIYNTMI 547
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 170/350 (48%), Gaps = 13/350 (3%)
Query: 259 RAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
R +P+LVT V+ L + G D L + ++K +V IY+ I L C R
Sbjct: 219 RGCQPNLVTY---GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL-CKYR 274
Query: 319 YED-AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
+ED A ++ ME +RP+ +T S +++ + R + DA M + + +
Sbjct: 275 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWS-DASRLLSDMIERKINPNVVTF 333
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
A++ +F EG + A + EM K+ + + Y++L++ FC + ++EA+ +F M +
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
K+ P T+N L++ + + + L EM GL +YT LI + Q + D
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF-FQARDCD 452
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
A F +M G+ P +Y L+ +G EKA V FE +QR ++P+I TY ++
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTK---VTFNILVDGFAKQGQYMEA 604
+G +AG + W L S ++G K + +N ++ GF ++G EA
Sbjct: 513 EGMCKAGKVEDG---WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 190/413 (46%), Gaps = 4/413 (0%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D + LF + S+ + +N +S + +++ + E M++ I + T +I+
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ + + + A KM + G + S L +++ +C +S A+ + +M + G
Sbjct: 127 INCFCRRSQISL-ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
+ I + TL+ N EA L M + +P T+ ++++ +R +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
NLL +M+ ++ Y+ +I + + + D A + F +M+ G++P +Y++LI
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD-ALNLFTEMENKGVRPNVITYSSLISC 304
Query: 525 Y-SVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEG 583
+ W + + + + ++R+ I P++ T+ L+D F + G K++ M+ ++
Sbjct: 305 LCNYERWSDASRLLSDMIERK-INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 584 TKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLL 643
T++ L++GF + EA+ + P V+TYN L+N + + + + +L
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 644 KEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+EM+ L ++VTY+T+I+ KQM+ G ++ +Y L
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 135/310 (43%), Gaps = 36/310 (11%)
Query: 422 SNHVEEAEGLF-----------------------------------VEMKAKNVKPTAAT 446
S +++A GLF +M+ + T
Sbjct: 63 SMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYT 122
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
+NIL++ + RR Q + LL +M +G +P+ + + L++ Y K++SD A +M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA-LVDQM 181
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
++G +P + ++T LIH + +A + M + G +P++ TY +++G + GD
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
+ M + K+E V ++ ++D K +A ++ +E G+ P V+TY+ L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 627 MNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQ 686
++ + S +LL +M + P+ VT++ +I + +MIK
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 687 VMDVDSYQKL 696
D+ +Y L
Sbjct: 362 DPDIFTYSSL 371
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D ++F+ + S ++ YN + GL G+ E A V+E +++ + P T +IM
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ M K G+ +D W F ++ KGVK + ++ FC +GL A + +M + G
Sbjct: 512 IEGMCKAGK-VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 213/477 (44%), Gaps = 35/477 (7%)
Query: 191 CQKKELPLPEGVVGEIVQLARNLPENLTLEEALAQY--GERVSEKECW--EVLEVLGKER 246
C++ +L L ++G++++L P +TL L + G R+SE +++E+
Sbjct: 121 CRRSQLSLALAILGKMMKLGYG-PSIVTLNSLLNGFCHGNRISEAVALVDQMVEM----- 174
Query: 247 LLVCCLYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIY 306
+P VT T L L + + + L + D+ Y
Sbjct: 175 -------------GYQPDTVTF---TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 307 NAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMN 366
A I+GL G + A + MEK I D V + ++ + K + DA+ F KM
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY-KHMDDAFDLFNKME 277
Query: 367 RKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVE 426
KG+K ++ C G S A + S+M +K + + + +N L+DAF K +
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 427 EAEGLFVEM-KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
EAE L+ EM K+K+ P +N L+ + + + + + EM GL +YT L
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
I + Q + D A F +M G+ P +Y L+ +G E A V FE MQ+
Sbjct: 398 IHGF-FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK---VTFNILVDGFAKQGQYM 602
+K I TYTT+++ +AG + W L S ++G K VT+ ++ GF ++G
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDG---WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 513
Query: 603 EARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
EA + E + G P TYN L+ A R G + +L+KEM + D+ T+
Sbjct: 514 EADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 188/422 (44%), Gaps = 36/422 (8%)
Query: 307 NAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMN 366
N+ ++G R +A + + M + +PD VT + +V + + + A +A E+M
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK-ASEAVALVERMV 207
Query: 367 RKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVE 426
KG + GA++ C G AL + ++MEK + ++ ++YNT++D CK H++
Sbjct: 208 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMD 267
Query: 427 EAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLI 486
+A LF +M+ K +KP T+N L+ + LL++M + + P + LI
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Query: 487 SAYGRQKKMS-----------------DMAA------------------DAFLKMKKVGI 511
A+ ++ K+ D+ A + F +M + G+
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMK 571
+ +YT LIH + + + A + F+ M +G+ P I TY LLDG G+ +T +
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 572 IWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYA 631
+++ M ++ VT+ +++ K G+ + D+ G+ P V+TY +M+ +
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 632 RGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVD 691
R G + L EM P+S TY+T+I K+M G D
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS 567
Query: 692 SY 693
++
Sbjct: 568 TF 569
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 166/380 (43%), Gaps = 3/380 (0%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
+ +DA ++ M K P V S +++ + K+ + E+M G+ +
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL-VISLGEQMQNLGISHNLYTY 113
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
+ FC +S AL I +M K G + + N+L++ FC N + EA L +M
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
+P TF L+H + + L+ M G +P +Y +I+ ++ + D
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE-PD 232
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
+A + KM+K I+ Y +I + A+ F M+ +GIKP + TY L+
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIG-L 616
G ++ M+ + + V FN L+D F K+G+ +EA + E K
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXX 676
P V+ YN L+ + + + + ++ +EM+ L ++VTY+T+I+
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 677 YHKQMIKSGQVMDVDSYQKL 696
KQM+ G D+ +Y L
Sbjct: 413 VFKQMVSDGVHPDIMTYNIL 432
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 173/414 (41%), Gaps = 38/414 (9%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D + LF ++ S+ F + ++ +S + +++ + E M+ I + T SI
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ + + + A KM + G S L +++ FC +S A+ + +M + G
Sbjct: 117 INYFCRRSQLSL-ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
+ + + TL+ + N EA L M K +P T+ +++ +R +P +
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
NLL +M+ ++ Y +I + K M D A D F KM+ GIKP +Y LI
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD-AFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 525 YSVSG-W------------------------------HEKAYVAFENMQREGIK-----P 548
G W E V E + E +K P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 549 SIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVI 608
+ Y TL+ GF + + M++++ M + G VT+ L+ GF + A+ V
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 609 SEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ G+HP +MTYN+L++ G + + M ++K D VTY+TMI
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 137/314 (43%), Gaps = 5/314 (1%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D LF + + DV YN IS L GR+ DA ++ M + NI PD V + +
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ K G+ + + E + K ++K FC V + + EM ++G
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
+ N + Y TL+ F ++ + A+ +F +M + V P T+NIL+ +
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
+ MQ +K +YT +I A + K+ D D F + G+KP +YT ++
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED-GWDLFCSLSLKGVKPNVVTYTTMMSG 505
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
+ G E+A F M+ +G P+ TY TL+ R GD ++ K M S G
Sbjct: 506 FCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565
Query: 585 KVTF----NILVDG 594
TF N+L DG
Sbjct: 566 ASTFGLVTNMLHDG 579
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 193/441 (43%), Gaps = 40/441 (9%)
Query: 257 WMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCC 316
W EP +T F L GR + + L + K+ D+ + I+GL
Sbjct: 132 WKLGYEPDTITFSTLVNGFCLEGRVS---EAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEV 376
GR +A + + M + +PD VT ++ + K G SA A F KM + +K S
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL-ALDLFRKMEERNIKASVVQ 247
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
++ S C +G AL + +EME KG+ ++ + Y++L+ C ++ + EM
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 437 AKNVKPTAATFNILMHAY-----------------SRRMQPKIV-----------ENLLA 468
+N+ P TF+ L+ + +R + P + EN L
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 469 E---MQDI----GLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAL 521
E M D+ G +P +Y+ LI++Y + K++ D F ++ G+ P + +Y L
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD-GMRLFREISSKGLIPNTITYNTL 426
Query: 522 IHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKV 581
+ + SG A F+ M G+ PS+ TY LLDG G+ ++I++ M ++
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 582 EGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQ 641
+NI++ G + +A + G+ P V+TYN+++ + G S+
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 642 LLKEMAALNLKPDSVTYSTMI 662
L ++M PD TY+ +I
Sbjct: 547 LFRKMKEDGCTPDDFTYNILI 567
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 177/393 (45%), Gaps = 11/393 (2%)
Query: 276 PLLGR---AGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKD 332
P+L R +G + LFR + V Y+ I L G ++DA ++ ME
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 333 NIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSR 392
I+ D VT S ++ + G+ D +M + + A++ F EG +
Sbjct: 275 GIKADVVTYSSLIGGLCNDGK-WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 393 ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMH 452
A + +EM +G+ + I YN+L+D FCK N + EA +F M +K +P T++IL++
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 453 AYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIK 512
+Y + + L E+ GL P +Y L+ + + K+ + A + F +M G+
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL-NAAKELFQEMVSRGVP 452
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI 572
P+ +Y L+ +G KA FE MQ+ + I Y ++ G A
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD---DA 509
Query: 573 WKLMMSEKVEGTK---VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
W L S +G K VT+N+++ G K+G EA + + + G P TYN+L+ A
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ G +L++EM DS T +I
Sbjct: 570 HLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 179/362 (49%), Gaps = 2/362 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D ++ ++G GR +A + + M + RPD VT S ++ + GR +A
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR-VSEALVL 197
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
++M G + E G ++ C G + AL + +ME++ + ++ + Y+ ++D+ CK
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
++A LF EM+ K +K T++ L+ + +L EM + P +
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
++ LI + ++ K+ + A + + +M GI P + +Y +LI + +A F+ M
Sbjct: 318 FSALIDVFVKEGKLLE-AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
+G +P I TY+ L++ + +A M++++ + S+ + +T+N LV GF + G+
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
A+++ E G+ P+V+TY +L++ G+ +K ++ ++M + Y+ +
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 662 IY 663
I+
Sbjct: 497 IH 498
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 176/400 (44%), Gaps = 10/400 (2%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
LF ++ S+ +N S + +Y+ + ME + I D T +IM+
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116
Query: 350 KLGRSAKDAWYFFEKMNRK---GVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVF 406
+ K + F + R G + +V FC EG VS A+ + M +
Sbjct: 117 R----KKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 407 SNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENL 466
+ + +TL++ C V EA L M +P T+ +++ + + +L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 467 LAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYS 526
+M++ +K + Y+ +I + + D A F +M+ GIK +Y++LI
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDD-ALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 527 VSG-WHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK 585
G W + A + E + R I P + T++ L+D F + G +++ M++ +
Sbjct: 292 NDGKWDDGAKMLREMIGRN-IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 586 VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 645
+T+N L+DGF K+ EA + G P ++TY++L+N+Y + + +L +E
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 646 MAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSG 685
+++ L P+++TY+T++ ++M+ G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 159/345 (46%), Gaps = 2/345 (0%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
+ DA ++ESM + P + + + + + + + F + M G++ +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVART-KQYDLVLGFCKGMELNGIEHDMYTM 108
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
++ +C + + A + K G + I ++TL++ FC V EA L M
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
+P T + L++ + + L+ M + G +P +Y +++ + S
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN-SA 227
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
+A D F KM++ IK + Y+ +I + G + A F M+ +GIK + TY++L+
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
G G K+ + M+ + VTF+ L+D F K+G+ +EA+++ +E G+
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
P +TYN L++ + + + Q+ M + +PD VTYS +I
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 94/244 (38%), Gaps = 37/244 (15%)
Query: 259 RAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
+ EP +VT ++L +A D M LFR + S + YN + G G+
Sbjct: 379 KGCEPDIVTY---SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 319 YEDAWKVYESMEKDNIRPDHVTCSIMVT-------------VMRKLGRS----------- 354
A ++++ M + P VT I++ + K+ +S
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 355 ----------AKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
DAW F ++ KGVK ++ C +G +S A ++ +M++ G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
+ YN L+ A + + + L EMK ++T +++ S R K
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFL 615
Query: 465 NLLA 468
++L+
Sbjct: 616 DMLS 619
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 171/357 (47%), Gaps = 2/357 (0%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
Y+ I GL GR E+A+ + + M + +P T ++++ + G K A+ F++M
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDK-AFNLFDEM 327
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
+G K + ++ C +G + A + +M K +F + I YN L++ +CK V
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV 387
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
A L M+ + KP TFN LM R +P +LL M D GL P SY L
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
I R+ M + A M I+P ++TA+I+A+ G + A M R+G
Sbjct: 448 IDGLCREGHM-NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
I T TTL+DG + G T+ + I + ++ ++ T + N+++D +K + E
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEEL 566
Query: 606 DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
++ + K+GL P+V+TY L++ R G + ++L+ M P+ Y+ +I
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 174/398 (43%), Gaps = 6/398 (1%)
Query: 267 TPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVY 326
+ R TVL L G+ DK LF + +VH Y I GL G+ E+A V
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 327 ESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCA 386
M KD I P +T + ++ K GR A+ M ++ K + +++ C
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVP-AFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 387 EGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAAT 446
G +A+ + M G+ + + YN L+D C+ H+ A L M +++P T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD--MAADAFL 504
F +++A+ ++ + + L M G+ + T LI + K D + +
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 505 KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAG 564
KM+ I T HS ++ S ++ + + G+ PS+ TYTTL+DG R+G
Sbjct: 539 KMR---ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Query: 565 DTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYN 624
D +I +LM + I+++G + G+ EA ++S G+ P +TY
Sbjct: 596 DITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYT 655
Query: 625 MLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+++ Y G+ + + ++ M + + YS+++
Sbjct: 656 VMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 156/342 (45%), Gaps = 3/342 (0%)
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIV 381
A+ Y ME D + +V + K G + + A F K+ + G + +++
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYT-EAAEMFMSKILKIGFVLDSHIGTSLL 237
Query: 382 KSFCAEGLVSRALIIQSEMEKKGVFS-NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV 440
FC + AL + M K+ + N++ Y+ L+ C+ +EEA GL +M K
Sbjct: 238 LGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGC 297
Query: 441 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA 500
+P+ T+ +L+ A R NL EM G KP ++YT LI R K+ + A
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEE-AN 356
Query: 501 DAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
KM K I P+ +Y ALI+ Y G A+ M++ KP++ T+ L++G
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTV 620
R G + + K M+ + V++N+L+DG ++G A ++S + P
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Query: 621 MTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+T+ ++NA+ + G+ L M + D VT +T+I
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 156/326 (47%), Gaps = 6/326 (1%)
Query: 342 SIMVTVMRKLGRSAKDAW---YFFEKMNRK-GVKWSEEVLGAIVKSFCAEGLVSRALIIQ 397
+++V ++++ R K+ Y F+++ G + + +++ S L A +
Sbjct: 124 AVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTY 183
Query: 398 SEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRR 457
ME G I Y T+++A CK+ + E AE ++ + L+ + R
Sbjct: 184 RRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRG 243
Query: 458 MQPKIVENLLAEM-QDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSH 516
+ + + M +++ P + SY+ LI ++ + A +M + G +P++
Sbjct: 244 LNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEE-AFGLKDQMGEKGCQPSTR 302
Query: 517 SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM 576
+YT LI A G +KA+ F+ M G KP++ TYT L+DG R G + + + M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 577 MSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQH 636
+ +++ + +T+N L++G+ K G+ + A ++++ K P V T+N LM R G+
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 637 SKLPQLLKEMAALNLKPDSVTYSTMI 662
K LLK M L PD V+Y+ +I
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLI 448
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 194/440 (44%), Gaps = 8/440 (1%)
Query: 257 WMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCC 316
W+ + +AC + L R D + V ++ + S DVHIY CC
Sbjct: 153 WVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQ---CC 209
Query: 317 ---GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWS 373
G Y K+ + M I+P+ +I + + + ++A FE M + GV +
Sbjct: 210 FKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR-DNKMEEAEKMFELMKKHGVLPN 268
Query: 374 EEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFV 433
A++ +C G V +A + E+ + N +V+ TL+D FCK+ + A LFV
Sbjct: 269 LYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFV 328
Query: 434 EMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQK 493
M V P +N L+H + + LL+EM+ + L P +YT LI+ +
Sbjct: 329 HMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED 388
Query: 494 KMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETY 553
++++ A F KMK I P+S +Y +LIH Y E+A M G++P+I T+
Sbjct: 389 QVAE-ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITF 447
Query: 554 TTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGK 613
+TL+DG+ D + M ++ M + + VT+ L+D K+ EA + S+ +
Sbjct: 448 STLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLE 507
Query: 614 IGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXX 673
G+HP T+ L++ + + G+ S +E + V ++ +I
Sbjct: 508 AGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILR 567
Query: 674 XXXYHKQMIKSGQVMDVDSY 693
+ M G D+ SY
Sbjct: 568 ASRFFSDMRSCGITPDICSY 587
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 166/367 (45%), Gaps = 8/367 (2%)
Query: 297 SKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTC-SIMVTVMRKLGRSA 355
S KF + +++ I L G +E+A V M+ PD C SI+ ++R+ R
Sbjct: 127 SPKF-SIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRR--RRF 180
Query: 356 KDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
W ++ M +G+ + + + +GL S+ + EM G+ N +Y
Sbjct: 181 DSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIY 240
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGL 475
+ C+ N +EEAE +F MK V P T++ ++ Y + + L E+ L
Sbjct: 241 ILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAEL 300
Query: 476 KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
P + L+ + + +++ A F+ M K G+ P + Y LIH + SG +A
Sbjct: 301 LPNVVVFGTLVDGFCKARELVT-ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAV 359
Query: 536 VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGF 595
M+ + P + TYT L++G ++++ M +E++ + T+N L+ G+
Sbjct: 360 GLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGY 419
Query: 596 AKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDS 655
K+ +A D+ SE G+ P ++T++ L++ Y L EM + PD
Sbjct: 420 CKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDV 479
Query: 656 VTYSTMI 662
VTY+ +I
Sbjct: 480 VTYTALI 486
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 160/353 (45%), Gaps = 2/353 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
+++ Y+A I G G A+ +Y+ + + P+ V +V K R A
Sbjct: 268 NLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK-ARELVTARSL 326
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F M + GV + V ++ C G + A+ + SEME + + Y L++ C
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ V EA LF +MK + + P++AT+N L+H Y + + +L +EM G++P +
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
++ LI Y + + A + +M GI P +YTALI A+ ++A + +M
Sbjct: 447 FSTLIDGYCNVRDIK-AAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDM 505
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
GI P+ T+ L+DGF + G + ++ ++ V F L++G + G
Sbjct: 506 LEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYI 565
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
+ A S+ G+ P + +Y ++ + + + + L +M + P+
Sbjct: 566 LRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 4/293 (1%)
Query: 371 KWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEG 430
K+S V ++ F GL AL + EM K S A + ++++ + +
Sbjct: 129 KFSIGVFSLLIMEFLEMGLFEEALWVSREM-KCSPDSKACL--SILNGLVRRRRFDSVWV 185
Query: 431 LFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYG 490
+ M ++ + P + +L ++ E LL EM +G+KP YT I
Sbjct: 186 DYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLC 245
Query: 491 RQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSI 550
R KM + A F MKK G+ P ++Y+A+I Y +G +AY ++ + + P++
Sbjct: 246 RDNKMEE-AEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNV 304
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE 610
+ TL+DGF +A + T ++ M+ V+ +N L+ G K G +EA ++SE
Sbjct: 305 VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSE 364
Query: 611 FGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
+ L P V TY +L+N Q ++ +L ++M + P S TY+++I+
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 128/274 (46%), Gaps = 24/274 (8%)
Query: 396 IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK-NVKPTAATFNILMHAY 454
IQS GVFS I+ M F EEA + EMK + K + N L+
Sbjct: 125 IQSPKFSIGVFSLLIMEFLEMGLF------EEALWVSREMKCSPDSKACLSILNGLVR-- 176
Query: 455 SRRMQPKIVENLLAEMQDIGLKPTANSYTCLISA------YGRQKKMSDMAADAFLKMKK 508
RR V+ L M GL P + Y L Y +++K+ D +M
Sbjct: 177 RRRFDSVWVDYQL--MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLD-------EMTS 227
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
+GIKP + YT I E+A FE M++ G+ P++ TY+ ++DG+ + G+ +
Sbjct: 228 LGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMN 628
++K ++ ++ V F LVDGF K + + AR + K G+ P + YN L++
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 629 AYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ + G + LL EM +LNL PD TY+ +I
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILI 381
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 185/373 (49%), Gaps = 2/373 (0%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
LF ++ S+ F + +N +S ++ +Y+ + + ME IR D T +I++
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
+ + A KM + G + +G++V FC VS A+ + +M + G +
Sbjct: 132 CCFQVSL-ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
+ YN ++D+ CK+ V +A F E++ K ++P T+ L++ + LL++
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250
Query: 470 MQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG 529
M + P +Y+ L+ A+ + K+ + A + F +M ++ I P +Y++LI+ +
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLE-AKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 530 WHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFN 589
++A F+ M +G + +Y TL++GF +A + MK+++ M + VT+N
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 590 ILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAAL 649
L+ GF + G +A++ S+ G+ P + TYN+L+ G+ K + ++M
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 650 NLKPDSVTYSTMI 662
+ D VTY+T+I
Sbjct: 430 EMDLDIVTYTTVI 442
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 158/342 (46%), Gaps = 2/342 (0%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
R DA + + M + +PD V + ++ + K R DA+ FF+++ RKG++ +
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR-VNDAFDFFKEIERKGIRPNVVTY 228
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
A+V C S A + S+M KK + N I Y+ L+DAF K+ V EA+ LF EM
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
++ P T++ L++ + + M G SY LI+ + + K++ D
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
F +M + G+ + +Y LI + +G +KA F M GI P I TY LL
Sbjct: 349 -GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
G G+ + + I++ M +++ VT+ ++ G K G+ EA + GL
Sbjct: 408 GGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLK 467
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
P ++TY +M+ G ++ L +M L + T S
Sbjct: 468 PDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 153/307 (49%), Gaps = 1/307 (0%)
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
++ A+ + S+M K F + + +N L+ A K + L +M+ ++ TFNI
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
+++ + Q + ++L +M +G +P + L++ + R+ ++SD A KM ++
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD-AVSLVDKMVEI 184
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
G KP +Y A+I + + A+ F+ ++R+GI+P++ TYT L++G +
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
++ M+ +K+ +T++ L+D F K G+ +EA+++ E ++ + P ++TY+ L+N
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMD 689
+ + Q+ M + D V+Y+T+I ++M + G V +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 690 VDSYQKL 696
+Y L
Sbjct: 365 TVTYNTL 371
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 144/298 (48%), Gaps = 1/298 (0%)
Query: 399 EMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRM 458
+ME G+ ++ +N +++ FC V A + +M +P T L++ + RR
Sbjct: 110 KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN 169
Query: 459 QPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSY 518
+ +L+ +M +IG KP +Y +I + + K+++D A D F ++++ GI+P +Y
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND-AFDFFKEIERKGIRPNVVTY 228
Query: 519 TALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMS 578
TAL++ S A +M ++ I P++ TY+ LLD F + G ++++ M+
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 579 EKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSK 638
++ VT++ L++G + EA + G V++YN L+N + + +
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 639 LPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+L +EM+ L ++VTY+T+I + QM G D+ +Y L
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 7/189 (3%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
+F + S DV YN I+G R ED K++ M + + + VT + ++
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 350 KLGRSAKDAWYFFEKMNRKGVK---WSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVF 406
+ G K A FF +M+ G+ W+ +L + C G + +AL+I +M+K+ +
Sbjct: 377 QAGDVDK-AQEFFSQMDFFGISPDIWTYNIL---LGGLCDNGELEKALVIFEDMQKREMD 432
Query: 407 SNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENL 466
+ + Y T++ CK+ VEEA LF + K +KP T+ +M + VE L
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Query: 467 LAEMQDIGL 475
+M+ GL
Sbjct: 493 YTKMKQEGL 501
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Query: 280 RAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHV 339
+AG DK F + D+ YN + GL G E A ++E M+K + D V
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 340 TCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSE 399
T + ++ M K G+ ++AW F ++ KG+K ++ C +GL+ + ++
Sbjct: 437 TYTTVIRGMCKTGK-VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495
Query: 400 MEKKGVFSN 408
M+++G+ N
Sbjct: 496 MKQEGLMKN 504
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 177/392 (45%), Gaps = 3/392 (0%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
VL L RA +++ ++PS D + + G + G + A ++ E M +
Sbjct: 193 NVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE 252
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM-NRKGVKWSEEVLGAIVKSFCAEGLV 390
+V+ +++V K GR +DA F ++M N+ G + +V C G V
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGR-VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV 311
Query: 391 SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
A+ I M ++G + YN+++ CK V+EA + +M ++ P T+N L
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 451 MHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVG 510
+ + Q + L + G+ P ++ LI + +A + F +M+ G
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR-VAMELFEEMRSKG 430
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
+P +Y LI + G ++A + M+ G S+ TY TL+DGF +A T+
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAY 630
+I+ M V VT+N L+DG K + +A ++ + G P TYN L+ +
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Query: 631 ARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
RGG K +++ M + +PD VTY T+I
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 157/350 (44%), Gaps = 5/350 (1%)
Query: 307 NAAISGLLCCGRYEDAWKVYESM-EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
N + G GR EDA + M +D PD T + +V + K G K A + M
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH-VKHAIEIMDVM 321
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
++G +++ C G V A+ + +M + N + YNTL+ CK N V
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQV 381
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
EEA L + +K + P TFN L+ ++ L EM+ G +P +Y L
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
I + + K+ D A + +M+ G + +Y LI + + +A F+ M+ G
Sbjct: 442 IDSLCSKGKL-DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
+ + TY TL+DG ++ + ++ M+ E + K T+N L+ F + G +A
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 606 DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK--EMAALNLKP 653
D++ G P ++TY L++ + G+ +LL+ +M +NL P
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP 610
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 165/360 (45%), Gaps = 3/360 (0%)
Query: 300 FRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAW 359
F D + +N ++GL G + A ++ + M ++ PD T + +++ + KLG K+A
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE-VKEAV 350
Query: 360 YFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAF 419
++M + + ++ + C E V A + + KG+ + +N+L+
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 420 CKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTA 479
C + + A LF EM++K +P T+N+L+ + + + N+L +M+ G +
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 480 NSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
+Y LI + + K + A + F +M+ G+ S +Y LI S E A +
Sbjct: 471 ITYNTLIDGFCKANKTRE-AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
M EG KP TY +LL F R GD + I + M S E VT+ L+ G K G
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN-LKPDSVTY 658
+ A ++ G++ T YN ++ R + ++ L +EM N PD+V+Y
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSY 649
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 3/276 (1%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
L R L S DV +N+ I GL + A +++E M PD T ++++ +
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
G+ +A ++M G S ++ FC A I EME GV N+
Sbjct: 447 SKGK-LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
+ YNTL+D CKS VE+A L +M + KP T+N L+ + R K +++
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 470 MQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG 529
M G +P +Y LIS + ++ ++A+ ++ GI T H+Y +I
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRV-EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624
Query: 530 WHEKAYVAFENM-QREGIKPSIETYTTLLDGFRRAG 564
+A F M ++ P +Y + G G
Sbjct: 625 KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 135/277 (48%), Gaps = 8/277 (2%)
Query: 391 SRALIIQSEMEKKGVFS-NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
S AL + + KK FS +Y ++ +S ++ + + +MK+ + +TF I
Sbjct: 64 SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123
Query: 450 LMHAYSR-RMQPKIVENLLAEMQDIGLKPTANSYTCLISAY--GRQKKMSDMAADAFLKM 506
L+ +Y++ +Q +I+ + + + GLKP + Y +++ G K+ +++ KM
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS---HAKM 180
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
GIKP ++ LI A + A + E+M G+ P +T+TT++ G+ GD
Sbjct: 181 SVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDL 240
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF-GKIGLHPTVMTYNM 625
++I + M+ + V+ N++V GF K+G+ +A + I E + G P T+N
Sbjct: 241 DGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT 300
Query: 626 LMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
L+N + G +++ M PD TY+++I
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/456 (19%), Positives = 185/456 (40%), Gaps = 39/456 (8%)
Query: 278 LGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESM-EKDNIRP 336
LGR+G D + + ++ SS+ + I ++ V + M ++ ++P
Sbjct: 93 LGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKP 152
Query: 337 DHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALII 396
D + M+ ++ G S K KM+ G+K ++K+ C + A+++
Sbjct: 153 DTHFYNRMLNLLVD-GNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211
Query: 397 QSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR 456
+M G+ + + T+M + + ++ A + +M + + N+++H + +
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271
Query: 457 RMQPKIVENLLAEMQ--------------------------------DI----GLKPTAN 480
+ + N + EM D+ G P
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
+Y +IS + ++ + A + +M P + +Y LI E+A
Sbjct: 332 TYNSVISGLCKLGEVKE-AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
+ +GI P + T+ +L+ G + + M++++ M S+ E + T+N+L+D +G+
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
EA +++ + G +V+TYN L++ + + + + ++ EM + +SVTY+T
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 661 MIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+I QMI GQ D +Y L
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 192/422 (45%), Gaps = 39/422 (9%)
Query: 279 GRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDH 338
GRAG M L ++ + YN I+ G + +A +V + M + + PD
Sbjct: 57 GRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDL 116
Query: 339 VTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQS 398
VT +I+++ K GR A +FE M V+ I+ G S+AL + +
Sbjct: 117 VTHNIVLSAY-KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 175
Query: 399 EMEKKGVFS--NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR 456
M +K + + + ++M + +E +F M A+ +KP ++N LM AY+
Sbjct: 176 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 235
Query: 457 RMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSH 516
++L +++ G+ P SYTCL+++YGR ++ A + FL M+K KP
Sbjct: 236 HGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGK-AKEVFLMMRKERRKPNVV 294
Query: 517 SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR-------------- 562
+Y ALI AY +G+ +A F M+++GIKP++ + TLL R
Sbjct: 295 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 354
Query: 563 ---------------------AGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
A + + + +++ M +KV+ VTF IL+ G + +Y
Sbjct: 355 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 414
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
EA + E + + T Y+ ++ AY++ GQ ++ + +M +PD + Y++M
Sbjct: 415 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 474
Query: 662 IY 663
++
Sbjct: 475 LH 476
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 138/288 (47%), Gaps = 36/288 (12%)
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM 470
+YN ++ + N V++A GLF EM+ + KP A T++ L++A+ R Q + NL+ +M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 471 QDIGLKPTANSYTCLISAYGRQ----------KKMSD----------------------- 497
+ P+ ++Y LI+A G KKM+D
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 498 -MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM--QREGIKPSIETYT 554
A F MK ++P + ++ +I+ S G +A F +M +R +P + T+T
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 555 TLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKI 614
+++ + G+ + +++ M++E ++ V++N L+ +A G A V+ + +
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 615 GLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
G+ P V++Y L+N+Y R Q K ++ M KP+ VTY+ +I
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 300
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 141/304 (46%), Gaps = 4/304 (1%)
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
FFE M + K E A++ + G A+ + +M + + + YN L++A
Sbjct: 34 FFE-MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 92
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
S + EA + +M V P T NI++ AY Q + M+ ++P
Sbjct: 93 SSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTT 152
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKM--KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF 538
++ +I + + S A D F M K+ +P ++T+++H YSV G E F
Sbjct: 153 TFNIIIYCLSKLGQ-SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 211
Query: 539 ENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQ 598
E M EG+KP+I +Y L+ + G + T + + + + V++ L++ + +
Sbjct: 212 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 271
Query: 599 GQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
Q +A++V K P V+TYN L++AY G ++ ++ ++M +KP+ V+
Sbjct: 272 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 331
Query: 659 STMI 662
T++
Sbjct: 332 CTLL 335
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 172/391 (43%), Gaps = 37/391 (9%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T L GR+ K +F + ++ +V YNA I G +A +++ ME+
Sbjct: 262 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
D I+P+ V+ + T++ RS K K+N + VL A
Sbjct: 322 DGIKPNVVS---VCTLLAACSRSKK-------KVN------VDTVLSA------------ 353
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILM 451
+ +G+ N YN+ + ++ + +E+A L+ M+ K VK + TF IL+
Sbjct: 354 --------AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILI 405
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI 511
R + + L EM+D+ + T Y+ ++ AY +Q ++++ A F +MK G
Sbjct: 406 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTE-AESIFNQMKMAGC 464
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMK 571
+P +YT+++HAY+ S KA F M+ GI+P + L+ F + G +
Sbjct: 465 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFV 524
Query: 572 IWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYA 631
+ LM +++ T F + ++ A D+I ++ N +++ +
Sbjct: 525 LMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFG 584
Query: 632 RGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ G+ + +L ++ A + + TY+ ++
Sbjct: 585 KSGKVEAMMKLFYKIIASGVGINLKTYAILL 615
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 77/146 (52%)
Query: 518 YTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMM 577
Y +I ++ W ++A F MQ+ KP ETY L++ RAG + M + M+
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 578 SEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHS 637
+ ++ T+N L++ G + EA +V + G+ P ++T+N++++AY G Q+S
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 638 KLPQLLKEMAALNLKPDSVTYSTMIY 663
K + M ++PD+ T++ +IY
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIY 159
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 136/282 (48%), Gaps = 12/282 (4%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
YN+AI + E A +Y+SM K ++ D VT +I+++ ++ + +A + ++M
Sbjct: 366 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYP-EAISYLKEM 424
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
+ ++EV +++ ++ +G V+ A I ++M+ G + I Y +++ A+ S
Sbjct: 425 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 484
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
+A LF+EM+A ++P + + LM A+++ QP V L+ M++ + T + +
Sbjct: 485 GKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEI 544
Query: 486 ISAYG---RQKKMSDMAA--DAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
SA K+ D+ D +L +G+ ++H + SG E F
Sbjct: 545 FSACNTLQEWKRAIDLIQMMDPYLPSLSIGLT------NQMLHLFGKSGKVEAMMKLFYK 598
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVE 582
+ G+ +++TY LL+ G+ + +++ + M ++
Sbjct: 599 IIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQ 640
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 3/217 (1%)
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y +I + R + D A F +M+K KP + +Y ALI+A+ +G A ++M
Sbjct: 14 YNMMIRLHARHNWV-DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
R I PS TY L++ +G+ + +++ K M V VT NI++ + QY
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM--AALNLKPDSVTYS 659
+A + P T+N+++ ++ GQ S+ L M +PD VT++
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 660 TMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
++++ + M+ G ++ SY L
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNAL 229
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 192/422 (45%), Gaps = 39/422 (9%)
Query: 279 GRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDH 338
GRAG M L ++ + YN I+ G + +A +V + M + + PD
Sbjct: 189 GRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDL 248
Query: 339 VTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQS 398
VT +I+++ K GR A +FE M V+ I+ G S+AL + +
Sbjct: 249 VTHNIVLSAY-KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
Query: 399 EMEKKGVFS--NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR 456
M +K + + + ++M + +E +F M A+ +KP ++N LM AY+
Sbjct: 308 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 367
Query: 457 RMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSH 516
++L +++ G+ P SYTCL+++YGR ++ A + FL M+K KP
Sbjct: 368 HGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGK-AKEVFLMMRKERRKPNVV 426
Query: 517 SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR-------------- 562
+Y ALI AY +G+ +A F M+++GIKP++ + TLL R
Sbjct: 427 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 486
Query: 563 ---------------------AGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
A + + + +++ M +KV+ VTF IL+ G + +Y
Sbjct: 487 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 546
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
EA + E + + T Y+ ++ AY++ GQ ++ + +M +PD + Y++M
Sbjct: 547 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 606
Query: 662 IY 663
++
Sbjct: 607 LH 608
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 197/481 (40%), Gaps = 4/481 (0%)
Query: 203 VGEIVQLARNLPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQE 262
V E+V L ++ L + R + K ++ L + + C+ F+WM+ Q+
Sbjct: 78 VSEVVDRLMALNRWEEVDGVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFKWMKIQK 137
Query: 263 PSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDA 322
++ L R D+ LF + D Y+A I+ G++ A
Sbjct: 138 NYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWA 197
Query: 323 WKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVK 382
+ + M + I P T + ++ G + ++A +KM GV ++
Sbjct: 198 MNLMDDMLRAAIAPSRSTYNNLINACGSSG-NWREALEVCKKMTDNGVGPDLVTHNIVLS 256
Query: 383 SFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV-- 440
++ + S+AL M+ V + +N ++ K +A LF M+ K
Sbjct: 257 AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC 316
Query: 441 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA 500
+P TF +MH YS + + + + M GLKP SY L+ AY MS A
Sbjct: 317 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG-MSGTAL 375
Query: 501 DAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
+K+ GI P SYT L+++Y S KA F M++E KP++ TY L+D +
Sbjct: 376 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 435
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTV 620
G ++I++ M + ++ V+ L+ ++ + + V+S G++
Sbjct: 436 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNT 495
Query: 621 MTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQ 680
YN + +Y + K L + M +K DSVT++ +I Y K+
Sbjct: 496 AAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKE 555
Query: 681 M 681
M
Sbjct: 556 M 556
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 178/398 (44%), Gaps = 16/398 (4%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T L GR+ K +F + ++ +V YNA I G +A +++ ME+
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 332 DNIRPDHVT-CSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLV 390
D I+P+ V+ C+++ R + D +G+ + + + S+ +
Sbjct: 454 DGIKPNVVSVCTLLAACSRSKKKVNVDT--VLSAAQSRGINLNTAAYNSAIGSYINAAEL 511
Query: 391 SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
+A+ + M KK V ++++ + L+ C+ + EA EM+ ++ T ++ +
Sbjct: 512 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 571
Query: 451 MHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVG 510
+ AYS++ Q E++ +M+ G +P +YT ++ AY +K A + FL+M+ G
Sbjct: 572 LCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK-ACELFLEMEANG 630
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPS------IETYTTLLDGFRRAG 564
I+P S + +AL+ A++ G +V + M+ + I + I + L ++RA
Sbjct: 631 IEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAI 690
Query: 565 DTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYN 624
D MM + +S + N ++ F K G+ + + G+ + TY
Sbjct: 691 DLIQMMDPYLPSLSIGLT------NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYA 744
Query: 625 MLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+L+ G K ++L+ M+ ++P + Y +I
Sbjct: 745 ILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII 782
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 179/392 (45%), Gaps = 2/392 (0%)
Query: 305 IYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEK 364
+Y+ I L G +D+ +++ M P TC+ ++ + K G W F ++
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV-SVWSFLKE 223
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
M ++ + ++ CAEG ++ + +MEK G + YNT++ +CK
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
+ A L MK+K V T+N+L+H R + LL +M+ + P +Y
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE 544
LI+ + + K+ +A+ +M G+ P ++ ALI + G ++A F M+ +
Sbjct: 344 LINGFSNEGKVL-IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 402
Query: 545 GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA 604
G+ PS +Y LLDG + + + M V ++T+ ++DG K G EA
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 605 RDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYX 664
+++E K G+ P ++TY+ L+N + + G+ +++ + + L P+ + YST+IY
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 522
Query: 665 XXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
++ MI G D ++ L
Sbjct: 523 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 554
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 168/395 (42%), Gaps = 2/395 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV YN I L R + + M K I P+ VT + ++ G+ A
Sbjct: 302 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK-VLIASQL 360
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
+M G+ + A++ +EG AL + ME KG+ + + Y L+D CK
Sbjct: 361 LNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK 420
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ + A G ++ MK V T+ ++ + LL EM G+ P +
Sbjct: 421 NAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVT 480
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y+ LI+ + + + A + ++ +VG+ P Y+ LI+ G ++A +E M
Sbjct: 481 YSALINGFCKVGRFKT-AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 539
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
EG T+ L+ +AG + + M S+ + V+F+ L++G+ G+
Sbjct: 540 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 599
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
++A V E K+G HPT TY L+ +GG + + LK + A+ D+V Y+T+
Sbjct: 600 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 659
Query: 662 IYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+ +M++ + D +Y L
Sbjct: 660 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 694
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 176/407 (43%), Gaps = 20/407 (4%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
+NA I G + G +++A K++ ME + P V+ +++ + K A F+ +M
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK-NAEFDLARGFYMRM 434
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
R GV ++ C G + A+++ +EM K G+ + + Y+ L++ FCK
Sbjct: 435 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 494
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSR----RMQPKIVENLLAEMQDIGLKPTANS 481
+ A+ + + + P ++ L++ R + +I E ++ E G +
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE----GHTRDHFT 550
Query: 482 YTCLISAYGRQKKMSDMAADAFLK-MKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
+ L+++ + K+++ A+ F++ M GI P + S+ LI+ Y SG KA+ F+
Sbjct: 551 FNVLVTSLCKAGKVAE--AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
M + G P+ TY +LL G + G + K K + + V +N L+ K G
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 668
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAAL-NLKPDSVTYS 659
+A + E + + P TY L++ R G+ KE A N+ P+ V Y+
Sbjct: 669 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 728
Query: 660 TMIYXXXXXXXXXXXXXYHKQMIKSGQVMD-------VDSYQKLRAI 699
+ + +QM G D +D Y ++ I
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 177/408 (43%), Gaps = 4/408 (0%)
Query: 257 WMRAQEPSLVTPRAC-TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLC 315
+MR + + R T + L + G D+ +VL + D+ Y+A I+G
Sbjct: 431 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 490
Query: 316 CGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEE 375
GR++ A ++ + + + P+ + S ++ ++G K+A +E M +G
Sbjct: 491 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG-CLKEAIRIYEAMILEGHTRDHF 549
Query: 376 VLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM 435
+V S C G V+ A M G+ N + ++ L++ + S +A +F EM
Sbjct: 550 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609
Query: 436 KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
PT T+ L+ + + E L + + Y L++A + +
Sbjct: 610 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 669
Query: 496 SDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYV-AFENMQREGIKPSIETYT 554
+ A F +M + I P S++YT+LI G A + A E R + P+ YT
Sbjct: 670 AK-AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 728
Query: 555 TLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKI 614
+DG +AG + + + M + VT N ++DG+++ G+ + D++ E G
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788
Query: 615 GLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
P + TYN+L++ Y++ S L + + + PD +T +++
Sbjct: 789 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 836
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 113/522 (21%), Positives = 205/522 (39%), Gaps = 82/522 (15%)
Query: 256 QWMRAQEPSLVTPRACTVLFPLL----GRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAIS 311
++MR + P TV F L G +G G K +F + Y + +
Sbjct: 569 EFMRCMTSDGILPN--TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 626
Query: 312 GLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVK 371
GL G +A K +S+ D V + ++T M K G AK A F +M ++ +
Sbjct: 627 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK-AVSLFGEMVQRSIL 685
Query: 372 WSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG-VFSNAIVY------------------ 412
+++ C +G A++ E E +G V N ++Y
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 745
Query: 413 -----------------NTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYS 455
N ++D + + +E+ L EM +N P T+NIL+H YS
Sbjct: 746 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 805
Query: 456 RR---------MQPKIVENLL---------------AEMQDIGLKPTANSYTC------- 484
+R + I+ +L + M +IGLK ++ C
Sbjct: 806 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK-ILKAFICRGVEVDR 864
Query: 485 -----LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
LIS ++ + A D M +GI + A++ + + +++ +
Sbjct: 865 YTFNMLISKCCANGEI-NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH 923
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
M ++GI P Y L++G R GD +T + + M++ K+ V + +V AK G
Sbjct: 924 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 983
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
+ EA ++ K+ L PT+ ++ LM+ + G + +L M+ LK D V+Y+
Sbjct: 984 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1043
Query: 660 TMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL-RAIL 700
+I +++M G + + +Y+ L R +L
Sbjct: 1044 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1085
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/364 (19%), Positives = 143/364 (39%), Gaps = 17/364 (4%)
Query: 252 LYFFQWMR--AQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAA 309
+YF + M P +VT A + R G +K L + + ++ YN
Sbjct: 744 IYFREQMDNLGHTPDIVTTNA---MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800
Query: 310 ISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMV-----TVMRKLGRSAKDAWYFFEK 364
+ G ++ +Y S+ + I PD +TC +V + M ++G A+
Sbjct: 801 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC--- 857
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
+GV+ ++ CA G ++ A + M G+ + + ++ +++
Sbjct: 858 ---RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHR 914
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
+E+ + EM + + P + + L++ R K + EM + P + +
Sbjct: 915 FQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESA 974
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE 544
++ A + K +D A M K+ + PT S+T L+H +G +A M
Sbjct: 975 MVRALAKCGK-ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNC 1033
Query: 545 GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA 604
G+K + +Y L+ G GD ++++ M + T+ L+ G +
Sbjct: 1034 GLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSG 1093
Query: 605 RDVI 608
D+I
Sbjct: 1094 ADII 1097
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 183/396 (46%), Gaps = 4/396 (1%)
Query: 255 FQWMRAQEPSLVTPRACT--VLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISG 312
FQ + + + V P CT +L L AG + + L + S K DV YN I G
Sbjct: 295 FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG 354
Query: 313 LLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKW 372
G +A K+ E ME D ++ + VT +I + + K + E ++ G
Sbjct: 355 CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSP 414
Query: 373 SEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLF 432
++K++ G +S AL + EM +KG+ N I NT++DA CK ++EA L
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 433 VEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQ 492
+ T+ L+ + R + + + EM+ + + PT +++ LI
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 493 KKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIET 552
K +++A + F ++ + G+ P ++ ++I Y G EKA+ + + KP T
Sbjct: 535 GK-TELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Query: 553 YTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFG 612
LL+G + G T+ + + ++ E+ E VT+N ++ F K + EA D++SE
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 613 KIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA 648
+ GL P TYN ++ G+ S+ +LLK+ +
Sbjct: 653 EKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSG 688
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 171/364 (46%), Gaps = 8/364 (2%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ YN I+GL G + ++ ++M+ ++PD VT + ++ +LG S +A
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSL-EARKL 367
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEG---LVSRALIIQSEMEKKGVFSNAIVYNTLMDA 418
E+M GVK ++ +K C E V+R ++ ++ G + + Y+TL+ A
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRK--VKELVDMHGFSPDIVTYHTLIKA 425
Query: 419 FCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPT 478
+ K + A + EM K +K T N ++ A + + NLL G
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 485
Query: 479 ANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF 538
+Y LI + R++K+ + A + + +MKKV I PT ++ +LI G E A F
Sbjct: 486 EVTYGTLIMGFFREEKV-EKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 539 ENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQ 598
+ + G+ P T+ +++ G+ + G + + + + + T NIL++G K+
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604
Query: 599 GQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
G +A + + + TV TYN +++A+ + + + LL EM L+PD TY
Sbjct: 605 GMTEKALNFFNTLIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY 663
Query: 659 STMI 662
++ I
Sbjct: 664 NSFI 667
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 166/381 (43%), Gaps = 3/381 (0%)
Query: 283 MGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCS 342
+ D L +L R + K D YN + + GR D ++ M+K+ + P+ VT +
Sbjct: 220 LEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYN 279
Query: 343 IMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEK 402
+V KLG S K+A+ E M + V ++ C G + L + M+
Sbjct: 280 NLVYGYCKLG-SLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338
Query: 403 KGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKI 462
+ + + YNTL+D + EA L +M+ VK T NI + + + +
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA 398
Query: 463 VENLLAEMQDI-GLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAL 521
V + E+ D+ G P +Y LI AY + +S A + +M + GIK + + +
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSG-ALEMMREMGQKGIKMNTITLNTI 457
Query: 522 IHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKV 581
+ A ++A+ + + G TY TL+ GF R + +++W M K+
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI 517
Query: 582 EGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQ 641
T TFN L+ G G+ A + E + GL P T+N ++ Y + G+ K +
Sbjct: 518 TPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE 577
Query: 642 LLKEMAALNLKPDSVTYSTMI 662
E + KPD+ T + ++
Sbjct: 578 FYNESIKHSFKPDNYTCNILL 598
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 160/365 (43%), Gaps = 8/365 (2%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKD-NIRPDHVTCSIMVTVMRKLGRSAKDAWY 360
+V +N ++G G+ EDA + E M + + PD+VT + ++ M K GR + D
Sbjct: 203 NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLS-DLKE 261
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
M + G+ + +V +C G + A I M++ V + YN L++ C
Sbjct: 262 LLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLC 321
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
+ + E L MK+ ++P T+N L+ L+ +M++ G+K
Sbjct: 322 NAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQV 381
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
++ + +++K + + G P +Y LI AY G A
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEG---TKVTFNILVDGFAK 597
M ++GIK + T T+LD + + + + L+ S G +VT+ L+ GF +
Sbjct: 442 MGQKGIKMNTITLNTILDALCKE---RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFR 498
Query: 598 QGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
+ + +A ++ E K+ + PTV T+N L+ G+ + E+A L PD T
Sbjct: 499 EEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDST 558
Query: 658 YSTMI 662
++++I
Sbjct: 559 FNSII 563
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 173/397 (43%), Gaps = 40/397 (10%)
Query: 305 IYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKL--GRSAKDAWYFF 362
+++ A+S L G+ A ++++ M + ++P+ +TC+ ++ + + S A F
Sbjct: 133 LFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVF 192
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRAL-IIQSEMEKKGVFSNAIVYNTLMDAFCK 421
+ M + GV + + +V +C EG + AL +++ + + V + + YNT++ A K
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ + + L ++MK + P T+N L++ Y + K ++ M+ + P +
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LI+ M + + MK + ++P +Y LI G +A E M
Sbjct: 313 YNILINGLCNAGSMRE-GLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 542 QREGIK------------------------------------PSIETYTTLLDGFRRAGD 565
+ +G+K P I TY TL+ + + GD
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 566 TQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNM 625
+++ + M + ++ +T N ++D K+ + EA ++++ K G +TY
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 626 LMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
L+ + R + K ++ EM + + P T++++I
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLI 528
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 144/295 (48%), Gaps = 6/295 (2%)
Query: 373 SEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK---SNHVEEAE 429
S+ + + ++ EG AL I +M + + N + NTL+ + S + A
Sbjct: 130 SKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAR 189
Query: 430 GLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM-QDIGLKPTANSYTCLISA 488
+F +M V TFN+L++ Y + + +L M + + P +Y ++ A
Sbjct: 190 EVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKA 249
Query: 489 YGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKP 548
++ ++SD+ + L MKK G+ P +Y L++ Y G ++A+ E M++ + P
Sbjct: 250 MSKKGRLSDLK-ELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 549 SIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVI 608
+ TY L++G AG + +++ M S K++ VT+N L+DG + G +EAR ++
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 609 SEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN-LKPDSVTYSTMI 662
+ G+ +T+N+ + + + + + +KE+ ++ PD VTY T+I
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 5/225 (2%)
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKP---TANSYTCLISAYGRQKKMSDM 498
P+ A F+I + AY +P + + +M + LKP T N+ + Y +S
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISS- 187
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE-GIKPSIETYTTLL 557
A + F M K+G+ ++ L++ Y + G E A E M E + P TY T+L
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
+ G + ++ M + +VT+N LV G+ K G EA ++ + +
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
P + TYN+L+N G + +L+ M +L L+PD VTY+T+I
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI 352
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR---AGDTQTM 569
P+ + + AY G A F+ M R +KP++ T TLL G R + +
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA----RDVISEFGKIGLHPTVMTYNM 625
+++ M+ V TFN+LV+G+ +G+ +A ++SEF ++P +TYN
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEF---KVNPDNVTYNT 245
Query: 626 LMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
++ A ++ G+ S L +LL +M L P+ VTY+ ++Y
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVY 283
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 4/175 (2%)
Query: 266 VTPRACTV--LFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAW 323
+TP T L L G + M F L S D +N+ I G GR E A+
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576
Query: 324 KVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKS 383
+ Y K + +PD+ TC+I++ + K G + K +F + + V ++ +
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV--TYNTMISA 634
Query: 384 FCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
FC + + A + SEME+KG+ + YN+ + + + E + L + K
Sbjct: 635 FCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 185/423 (43%), Gaps = 37/423 (8%)
Query: 307 NAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMN 366
N ++GL G+ DA + + M + +P+ VT ++ VM K G++A A KM
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL-AMELLRKME 255
Query: 367 RKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVE 426
+ +K I+ C +G + A + +EME KG ++ I YNTL+ FC + +
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 427 EAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLI 486
+ L +M + + P TF++L+ ++ + + + + LL EM G+ P +Y LI
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 487 SAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGI 546
+ ++ ++ + L + K G P ++ LI+ Y + + F M G+
Sbjct: 376 DGFCKENRLEEAIQMVDLMISK-GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 547 KPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARD 606
+ TY TL+ GF ++G + K+++ M+S +V V++ IL+DG G+ +A +
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494
Query: 607 VISEFGK------IGLHPTVM-----------------------------TYNMLMNAYA 631
+ + K IG++ ++ YN++++
Sbjct: 495 IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554
Query: 632 RGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVD 691
R SK L ++M PD +TY+ +I ++M SG DV
Sbjct: 555 RKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVS 614
Query: 692 SYQ 694
+ +
Sbjct: 615 TVK 617
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 186/419 (44%), Gaps = 3/419 (0%)
Query: 279 GRAGM-GDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPD 337
G G+ D + LFR++ S+ V +N S + +YE + + ME I
Sbjct: 63 GLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHS 122
Query: 338 HVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQ 397
T SIM+ + R A+ K+ + G + + ++ C E VS AL +
Sbjct: 123 IYTLSIMINCFCRC-RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELV 181
Query: 398 SEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRR 457
M + G I NTL++ C + V +A L M +P T+ +++ +
Sbjct: 182 DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241
Query: 458 MQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHS 517
Q + LL +M++ +K A Y+ +I + + D A + F +M+ G K +
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL-DNAFNLFNEMEIKGFKADIIT 300
Query: 518 YTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMM 577
Y LI + +G + +M + I P++ T++ L+D F + G + ++ K MM
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 578 SEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHS 637
+ +T+N L+DGF K+ + EA ++ G P +MT+N+L+N Y + +
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 638 KLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+L +EM+ + ++VTY+T++ ++M+ D+ SY+ L
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 175/363 (48%), Gaps = 4/363 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D I+N ++GL R +A ++ + M + +P +T + +V + G+ DA
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK-VSDAVVL 215
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
++M G + +E G ++ C G + A+ + +ME++ + +A+ Y+ ++D CK
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
++ A LF EM+ K K T+N L+ + + LL +M + P +
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 482 YTCLISAYGRQKKMSDMAADAFLK-MKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
++ LI ++ ++ K+ + AD LK M + GI P + +Y +LI + E+A +
Sbjct: 336 FSVLIDSFVKEGKLRE--ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
M +G P I T+ L++G+ +A +++++ M V VT+N LV GF + G+
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
A+ + E + P +++Y +L++ G+ K ++ ++ ++ D Y
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 661 MIY 663
+I+
Sbjct: 514 IIH 516
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 161/362 (44%), Gaps = 2/362 (0%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
+++ L + G D LF + D+ YN I G GR++D K+ M K
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
I P+ VT S+++ K G+ ++A ++M ++G+ + +++ FC E +
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGK-LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILM 451
A+ + M KG + + +N L++ +CK+N +++ LF EM + V T+N L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI 511
+ + + ++ + L EM ++P SY L+ ++ + A + F K++K +
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL-EKALEIFGKIEKSKM 504
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMK 571
+ Y +IH + + A+ F ++ +G+K Y ++ R
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 572 IWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYA 631
+++ M E ++T+NIL+ A ++I E G V T M++N +
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624
Query: 632 RG 633
G
Sbjct: 625 SG 626
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 188/464 (40%), Gaps = 38/464 (8%)
Query: 269 RACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYES 328
R+C L + G D + F+++ + V YN I + G E A ++E
Sbjct: 228 RSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEE 287
Query: 329 MEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEG 388
M+ + PD VT + M+ K+GR D FFE+M + A++ FC G
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGR-LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
+ L EM+ G+ N + Y+TL+DAFCK +++A +V+M+ + P T+
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK 508
L+ A + L EM +G++ +YT LI ++M + A + F KM
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE-AEELFGKMDT 465
Query: 509 VGIKPTSHSYTALIHA----------------------------YSVSGWH-------EK 533
G+ P SY ALIH Y W E
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEA 525
Query: 534 AYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVD 593
A V M+ GIK + YTTL+D + ++G+ + + M +E T VTF +L+D
Sbjct: 526 AKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLID 585
Query: 594 GFAKQGQYMEARDVISEFGK-IGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLK 652
G K +A D + GL + +++ + Q L ++M L
Sbjct: 586 GLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV 645
Query: 653 PDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
PD Y++++ +M + G +D+ +Y L
Sbjct: 646 PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 166/359 (46%), Gaps = 37/359 (10%)
Query: 305 IYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEK 364
+++A S L+ G E+A + + M++ + P +C+ ++ KLG++ D FF+
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT-DDVKRFFKD 252
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
M +GA G YN ++D CK
Sbjct: 253 M-----------IGA------------------------GARPTVFTYNIMIDCMCKEGD 277
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
VE A GLF EMK + + P T+N ++ + + + EM+D+ +P +Y
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE 544
LI+ + + K+ + + + +MK G+KP SY+ L+ A+ G ++A + +M+R
Sbjct: 338 LINCFCKFGKLP-IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 396
Query: 545 GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA 604
G+ P+ TYT+L+D + G+ ++ M+ VE VT+ L+DG + EA
Sbjct: 397 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456
Query: 605 RDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
++ + G+ P + +YN L++ + + + +LL E+ +KPD + Y T I+
Sbjct: 457 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 177/415 (42%), Gaps = 38/415 (9%)
Query: 278 LGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPD 337
G+ G D + F + DV YNA I+ G+ + Y M+ + ++P+
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 338 HVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQ 397
V+ S +V K G + A F+ M R G+ +E +++ + C G +S A +
Sbjct: 367 VVSYSTLVDAFCKEGM-MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 398 SEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRR 457
+EM + GV N + Y L+D C + ++EAE LF +M V P A++N L+H + +
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 458 MQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHS 517
LL E++ G+KP Y I +K+ + A +MK+ GIK S
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI-EAAKVVMNEMKECGIKANSLI 544
Query: 518 YTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG-------------FRRAG 564
YT L+ AY SG + + M+ I+ ++ T+ L+DG F R
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 565 D-----------------------TQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
+ + +++ M+ + + + + L+DG KQG
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSV 656
+EA + + +IG+ ++ Y L+ + Q K L+EM + PD V
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/482 (21%), Positives = 205/482 (42%), Gaps = 61/482 (12%)
Query: 191 CQKKELPLPEGVVGEIVQLARNLPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVC 250
C++ ++ G+ E+ + +P+ +T + +G+ +G+ VC
Sbjct: 273 CKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGK-------------VGRLDDTVC 318
Query: 251 CLYFFQWMR--AQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNA 308
FF+ M+ EP ++T A F G+ +G + +R + + +V Y+
Sbjct: 319 ---FFEEMKDMCCEPDVITYNALINCFCKFGKLPIG---LEFYREMKGNGLKPNVVSYST 372
Query: 309 AISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRK 368
+ G + A K Y M + + P+ T + ++ K+G + DA+ +M +
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG-NLSDAFRLGNEMLQV 431
Query: 369 GVKW--------------------SEEVLG---------------AIVKSFCAEGLVSRA 393
GV+W +EE+ G A++ F + RA
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA 453
L + +E++ +G+ + ++Y T + C +E A+ + EMK +K + + LM A
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Query: 454 YSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM-KKVGIK 512
Y + P +LL EM+++ ++ T ++ LI + K +S A D F ++ G++
Sbjct: 552 YFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSK-AVDYFNRISNDFGLQ 610
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI 572
+ +TA+I E A FE M ++G+ P YT+L+DG + G+ + +
Sbjct: 611 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 670
Query: 573 WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPT-VMTYNMLMNAYA 631
M ++ + + LV G + Q +AR + E G+HP V+ ++L Y
Sbjct: 671 RDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYE 730
Query: 632 RG 633
G
Sbjct: 731 LG 732
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 130/286 (45%), Gaps = 1/286 (0%)
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM 470
V++ L +EEA F +MK V P + N L+H +++ + V+ +M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 471 QDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW 530
G +PT +Y +I ++ + + A F +MK G+ P + +Y ++I + G
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDV-EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 531 HEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI 590
+ FE M+ +P + TY L++ F + G ++ ++ M ++ V+++
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 591 LVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN 650
LVD F K+G +A + ++GL P TY L++A + G S +L EM +
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 651 LKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
++ + VTY+ +I +M +G + ++ SY L
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 170/395 (43%), Gaps = 5/395 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D + I GL + +A + + M + +PD VT +V + K G A
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG-DIDLALNL 245
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
KM +K + + I+ S C V A+ + +EME KG+ N + YN+L++ C
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+A L M K + P TFN L+ A+ + + E L EM + P +
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT 365
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LI+ + ++ D A F M P +Y LI+ + E F M
Sbjct: 366 YNLLINGFCMHNRL-DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
+ G+ + TYTT++ GF +AGD + ++K M+S +V +T++IL+ G G+
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
A + K + + YN ++ + G K+ + +L++KPD VTY+TM
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG---KVGEAWDLFCSLSIKPDVVTYNTM 541
Query: 662 IYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
I ++M + G + + +Y L
Sbjct: 542 ISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 185/401 (46%), Gaps = 8/401 (1%)
Query: 259 RAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
R +P LVT TV+ L R + D + L + +++ +V I+N I L
Sbjct: 217 RGCQPDLVTYG--TVVNGLCKRGDI-DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 319 YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLG 378
E A ++ ME IRP+ VT + ++ + GR + DA M K + +
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS-DASRLLSNMLEKKINPNVVTFN 332
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
A++ +F EG + A + EM ++ + + I YN L++ FC N ++EA+ +F M +K
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
+ P T+N L++ + + + + L EM GL +YT +I + Q D
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF-FQAGDCDS 451
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
A F +M + +Y+ L+H G + A V F+ +Q+ ++ +I Y T+++
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE 511
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP 618
G +AG + W L S ++ VT+N ++ G + EA D+ + + G P
Sbjct: 512 GMCKAGKVG---EAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
TYN L+ A R + +L+KEM + D+ T S
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 178/391 (45%), Gaps = 5/391 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ Y ++GL G + A + ME I+ + V + ++ + K R + A
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY-RHVEVAVDL 280
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F +M KG++ + +++ C G S A + S M +K + N + +N L+DAF K
Sbjct: 281 FTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ EAE L EM +++ P T+N+L++ + + + + M P +
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT 400
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LI+ + + K++ D + F +M + G+ + +YT +I + +G + A + F+ M
Sbjct: 401 YNTLINGFCKCKRVED-GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
+ I TY+ LL G G T + I+K + ++E +N +++G K G+
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKV 519
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
EA D+ F + + P V+TYN +++ + L ++M P+S TY+T+
Sbjct: 520 GEAWDL---FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Query: 662 IYXXXXXXXXXXXXXYHKQMIKSGQVMDVDS 692
I K+M SG V D +
Sbjct: 577 IRANLRDCDRAASAELIKEMRSSGFVGDAST 607
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 183/412 (44%), Gaps = 2/412 (0%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D + LF ++ S+ F + +N +S + ++E + E M+ I D T SI
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ + + + A KM + G + L +++ +C +S A+ + +M + G
Sbjct: 125 INCFCRRSQLSL-ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
+ + TL+ N EA L +M + +P T+ +++ +R +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
NLL +M+ +K + +I + + + + ++A D F +M+ GI+P +Y +LI+
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHV-EVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
G A NM + I P++ T+ L+D F + G K+ + M+ ++
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
+T+N+L++GF + EA+ + P + TYN L+N + + + +L +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 645 EMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
EM+ L ++VTY+T+I KQM+ + D+ +Y L
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 145/307 (47%), Gaps = 1/307 (0%)
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
V A+ + +M K F + + +N L+ A K N E L +M+ + T++I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
++ + RR Q + +LA+M +G +P + + L++ Y K++SD A +M ++
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA-LVDQMVEM 182
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
G KP + ++T LIH + +A + M + G +P + TY T+++G + GD
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
+ + M + +++ V FN ++D K A D+ +E G+ P V+TYN L+N
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMD 689
G+ S +LL M + P+ VT++ +I H++MI+ D
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 690 VDSYQKL 696
+Y L
Sbjct: 363 TITYNLL 369
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 158/362 (43%), Gaps = 2/362 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D++ Y+ I+ + A V M K PD VT S ++ R + DA
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS-DAVAL 175
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
++M G K ++ S A+ + +M ++G + + Y T+++ CK
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
++ A L +M+A +K FN ++ + + ++ +L EM+ G++P +
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LI+ + SD A+ M + I P ++ ALI A+ G +A E M
Sbjct: 296 YNSLINCLCNYGRWSD-ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
+ I P TY L++GF +++K M+S+ T+N L++GF K +
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
+ ++ E + GL +TY ++ + + G + K+M + + D +TYS +
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 662 IY 663
++
Sbjct: 475 LH 476
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 175/364 (48%), Gaps = 6/364 (1%)
Query: 340 TCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSE-EVLGAIVKSFCAEGLVSRALIIQS 398
C MV ++ K+ R W E+M + + E E+ +++ F + +V +A+ +
Sbjct: 133 VCKSMVMILSKM-RQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLD 191
Query: 399 EMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRM 458
EM K G+ + V+ L+DA CK+ V+EA +F +M+ K P F L++ + R
Sbjct: 192 EMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREG 250
Query: 459 QPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSY 518
+ + +L +M++ GL+P +T L+S Y KM+D A D M+K G +P + Y
Sbjct: 251 KLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD-AYDLMNDMRKRGFEPNVNCY 309
Query: 519 TALIHAYS-VSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMM 577
T LI A ++A F M+R G + I TYT L+ GF + G + M
Sbjct: 310 TVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR 369
Query: 578 SEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHS 637
+ V ++VT+ ++ K+ Q+ E ++I + + G HP ++ YN+++ + G+
Sbjct: 370 KKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVK 429
Query: 638 KLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKLR 697
+ +L EM A L P T+ MI + K+M+ G + Y L+
Sbjct: 430 EAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRG-IFSAPQYGTLK 488
Query: 698 AILD 701
++L+
Sbjct: 489 SLLN 492
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 1/210 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ ++ +SG G+ DA+ + M K P+ ++++ + + + +A
Sbjct: 270 DIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRV 329
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F +M R G + A++ FC G++ + + +M KKGV + + Y +M A K
Sbjct: 330 FVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEK 389
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
EE L +MK + P +N+++ + + K L EM+ GL P ++
Sbjct: 390 KEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDT 449
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGI 511
+ +I+ + Q + + A + F +M GI
Sbjct: 450 FVIMINGFTSQGFLIE-ACNHFKEMVSRGI 478
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 114/308 (37%), Gaps = 43/308 (13%)
Query: 259 RAQEPSLVTPRACTVLFPLLGRAGMG-DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCG 317
R EP++ TVL L R D+ M +F + D+ Y A ISG G
Sbjct: 300 RGFEPNV---NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356
Query: 318 RYEDAWKVYESMEKDNIRPDHVT-CSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEV 376
+ + V + M K + P VT IMV +K ++ EKM R+G +
Sbjct: 357 MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKK--EQFEECLELIEKMKRRGCHPDLLI 414
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
+++ C G V A+ + +EME G+ + +++ F + EA F EM
Sbjct: 415 YNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMV 474
Query: 437 AKNV--KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKK 494
++ + P T L++ R D L+ + ++C+ +
Sbjct: 475 SRGIFSAPQYGTLKSLLNNLVR---------------DDKLEMAKDVWSCISN------- 512
Query: 495 MSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYT 554
K + ++T IHA G ++A +M + P TY
Sbjct: 513 ------------KTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYA 560
Query: 555 TLLDGFRR 562
L+ G +
Sbjct: 561 KLMKGLNK 568
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 206/452 (45%), Gaps = 7/452 (1%)
Query: 213 LPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQEPSLVTPRACT 272
E L + + + + G + E+ C L K R + CL F+ M +T + T
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRM-VDSGVKITVYSLT 228
Query: 273 VLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKD 332
++ L R G +K L + + + YN I+ + + V + M+KD
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 333 NIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSR 392
+ + VT ++++ + K G+ + DA F++M +G++ V +++ C +G + R
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMS-DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 393 ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMH 452
A ++ E+ +KG+ ++ Y L+D CK + AE L EM++K V T FN L+
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 453 AYSRRMQPKIVENLLAEMQDIGLKPTANSYTC--LISAYGRQKKMSDMAADAFLKMKKVG 510
Y R+ + M+ G + A+ +TC + S + R K+ D A +M + G
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQ--ADVFTCNTIASCFNRLKRY-DEAKQWLFRMMEGG 464
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
+K ++ SYT LI Y G E+A F M +G++P+ TY ++ + + G +
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEAR 524
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAY 630
K+ M + ++ T+ L+ G EA + SE G GL +TY ++++
Sbjct: 525 KLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGL 584
Query: 631 ARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
++ G+ + L EM D+ Y+ +I
Sbjct: 585 SKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 172/377 (45%), Gaps = 4/377 (1%)
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEV 376
G +E+ +V++ M K + D +C + + +K R F +M GVK +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKR-RRIDLCLEIFRRMVDSGVKITVYS 226
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
L +V+ C G V ++ + E KG+ A YNT+++A+ K EG+ MK
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMS 496
V T+ +LM + + E L EM++ G++ + YT LIS R+ M
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
A F ++ + G+ P+S++Y ALI G A + MQ +G+ + + TL
Sbjct: 347 -RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
+DG+ R G I+ +M + + T N + F + +Y EA+ + + G+
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXX 676
+ ++Y L++ Y + G + +L EM++ ++P+++TY+ MIY
Sbjct: 466 KLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARK 525
Query: 677 YHKQMIKSGQVMDVDSY 693
M +G MD DSY
Sbjct: 526 LRANMEANG--MDPDSY 540
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 195/445 (43%), Gaps = 3/445 (0%)
Query: 252 LYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAIS 311
L F +M + S + R+C V + D + +FR + S V+ +
Sbjct: 174 LRVFDYMVKKGLS-IDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVE 232
Query: 312 GLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVK 371
GL G E + K+ + I+P+ T + ++ K R + M + GV
Sbjct: 233 GLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVK-QRDFSGVEGVLKVMKKDGVV 291
Query: 372 WSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGL 431
+++ +++ G +S A + EM ++G+ S+ VY +L+ C+ +++ A L
Sbjct: 292 YNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLL 351
Query: 432 FVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGR 491
F E+ K + P++ T+ L+ + + E L+ EMQ G+ T + LI Y R
Sbjct: 352 FDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCR 411
Query: 492 QKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIE 551
K M D A+ + M++ G + + + ++ +++A M G+K S
Sbjct: 412 -KGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTV 470
Query: 552 TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF 611
+YT L+D + + G+ + +++ M S+ V+ +T+N+++ + KQG+ EAR + +
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANM 530
Query: 612 GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXX 671
G+ P TY L++ + +L EM L +SVTY+ MI
Sbjct: 531 EANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKS 590
Query: 672 XXXXXYHKQMIKSGQVMDVDSYQKL 696
+ +M + G +D Y L
Sbjct: 591 DEAFGLYDEMKRKGYTIDNKVYTAL 615
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 521 LIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEK 580
+ Y +G E+ F+ M ++G+ + L ++ ++I++ M+
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 581 VEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLP 640
V+ T + I+V+G ++G+ +++ +I EF G+ P TYN ++NAY + S +
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 641 QLLKEMAALNLKPDSVTYSTMIY 663
+LK M K D V Y+ + Y
Sbjct: 280 GVLKVM-----KKDGVVYNKVTY 297
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 161/355 (45%), Gaps = 38/355 (10%)
Query: 373 SEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAI---VYNTLMDAFCK-SNHVEEA 428
+E+ ++K++C GL+ RA ++ EM+ V I VYN ++ K + EEA
Sbjct: 211 TEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEA 270
Query: 429 EGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISA 488
+F MK KPT T+N++++ Y + + + L EM+ KP +YT L++A
Sbjct: 271 IDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNA 330
Query: 489 YGRQ---KKMSDM-------------------------------AADAFLKMKKVGIKPT 514
+ R+ +K ++ AA+ F M+ +G +P
Sbjct: 331 FAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPD 390
Query: 515 SHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK 574
SY ++ AY +G H A FE M+R GI P+++++ LL + +A D I K
Sbjct: 391 RASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVK 450
Query: 575 LMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGG 634
M VE N +++ + + GQ+ + +++E + TYN+L+N Y + G
Sbjct: 451 EMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAG 510
Query: 635 QHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMD 689
++ +L E+ N +PD VT+++ I ++MI SG D
Sbjct: 511 FLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 565
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 153/308 (49%), Gaps = 40/308 (12%)
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA 453
L+ + + K + I +N L+DA+ + +EAE L+V++ PT T+ +L+ A
Sbjct: 162 LVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKA 221
Query: 454 YSRRMQPKIVENLLAEMQD-------IGL------------------------------- 475
Y + E +L EMQ+ IG+
Sbjct: 222 YCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDR 281
Query: 476 -KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKA 534
KPT +Y +I+ YG+ K S M+ + +M+ KP +YTAL++A++ G EKA
Sbjct: 282 CKPTTETYNLMINLYGKASK-SYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 340
Query: 535 YVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDG 594
FE +Q +G++P + Y L++ + RAG +I+ LM E + ++NI+VD
Sbjct: 341 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 400
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
+ + G + +A V E ++G+ PT+ ++ +L++AY++ +K ++KEM+ ++PD
Sbjct: 401 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 460
Query: 655 SVTYSTMI 662
+ ++M+
Sbjct: 461 TFVLNSML 468
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 166/377 (44%), Gaps = 38/377 (10%)
Query: 287 LMVLFRNLPSSKKFRDVHIYNAAISGLLC-CGRYEDAWKVYESMEKDNIRPDHVTCSIMV 345
++V +N S K V +YNA I GL+ G E+A V++ M++D +P T ++M+
Sbjct: 234 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 293
Query: 346 TVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGV 405
+ K +S + W K +C EM
Sbjct: 294 NLYGKASKSY--------------MSW---------KLYC-------------EMRSHQC 317
Query: 406 FSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVEN 465
N Y L++AF + E+AE +F +++ ++P +N LM +YSR P
Sbjct: 318 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 377
Query: 466 LLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAY 525
+ + MQ +G +P SY ++ AYGR SD A F +MK++GI PT S+ L+ AY
Sbjct: 378 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA-VFEEMKRLGIAPTMKSHMLLLSAY 436
Query: 526 SVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK 585
S + K + M G++P ++L+ + R G M KI M +
Sbjct: 437 SKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI 496
Query: 586 VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 645
T+NIL++ + K G ++ E + P V+T+ + AY+R + K ++ +E
Sbjct: 497 STYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEE 556
Query: 646 MAALNLKPDSVTYSTMI 662
M PD T ++
Sbjct: 557 MIDSGCAPDGGTAKVLL 573
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 4/261 (1%)
Query: 268 PRACT--VLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKV 325
P CT L R G+ +K +F L DV++YNA + G A ++
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 378
Query: 326 YESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFC 385
+ M+ PD + +IMV + G + DA FE+M R G+ + + ++ ++
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGLHS-DAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
Query: 386 AEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAA 445
V++ I EM + GV + V N++++ + + + E + EM+ +
Sbjct: 438 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 497
Query: 446 TFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLK 505
T+NIL++ Y + + +E L E+++ +P ++T I AY R KK+ + F +
Sbjct: 498 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR-KKLYVKCLEVFEE 556
Query: 506 MKKVGIKPTSHSYTALIHAYS 526
M G P + L+ A S
Sbjct: 557 MIDSGCAPDGGTAKVLLSACS 577
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 132/316 (41%), Gaps = 14/316 (4%)
Query: 267 TPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVY 326
T ++ L G+A L+ + S + ++ Y A ++ G E A +++
Sbjct: 285 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 344
Query: 327 ESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY------FFEKMNRKGVKWSEEVLGAI 380
E +++D + PD V V L S A Y F M G + +
Sbjct: 345 EQLQEDGLEPD-------VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 397
Query: 381 VKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV 440
V ++ GL S A + EM++ G+ + L+ A+ K+ V + E + EM V
Sbjct: 398 VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 457
Query: 441 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA 500
+P N +++ Y R Q +E +LAEM++ ++Y LI+ YG+ + +
Sbjct: 458 EPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERI-E 516
Query: 501 DAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
+ F+++K+ +P ++T+ I AYS + K FE M G P T LL
Sbjct: 517 ELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSAC 576
Query: 561 RRAGDTQTMMKIWKLM 576
+ + + + M
Sbjct: 577 SSEEQVEQVTSVLRTM 592
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 166/355 (46%), Gaps = 39/355 (10%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
R+E ++ ++ + ++C ++ + K RSA D Y +++M R+ ++ +
Sbjct: 168 RFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSA-DVEYVYKEMIRRKIQPNVFTF 226
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK---SNHVEEAEGLFVE 434
++ + C G +++A + +M+ G N + YNTL+D +CK + + +A+ + E
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKE 286
Query: 435 MKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKK 494
M +V P TFNIL+ + + + EM D +KP SY LI+ K
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 495 MS-------------------------------DM---AADAFLKMKKVGIKPTSHSYTA 520
+S DM A D F +K G PT+ Y
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406
Query: 521 LIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEK 580
LI AY G + + E M+REGI P + TY L+ G R G+ + K++ + S+
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 581 VEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQ 635
+ VTF+IL++G+ ++G+ +A ++ E K+GL P +TYN++M Y + G
Sbjct: 467 LPDL-VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGN 520
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 195/407 (47%), Gaps = 12/407 (2%)
Query: 226 YGERVSEKECWEVLEVLGKERLLVCCLYFFQWM--RAQEPSLVTPRACTVLFPLLGRAGM 283
YG ++S C ++ L KE Y ++ M R +P++ T V+ L + G
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFT---FNVVINALCKTGK 238
Query: 284 GDKLMVLFRNLPSSKKFRDVHIYNAAISG---LLCCGRYEDAWKVYESMEKDNIRPDHVT 340
+K + ++ +V YN I G L G+ A V + M ++++ P+ T
Sbjct: 239 MNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTT 298
Query: 341 CSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEM 400
+I++ K + + F++M + VK + +++ C G +S A+ ++ +M
Sbjct: 299 FNILIDGFWK-DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKM 357
Query: 401 EKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQP 460
GV N I YN L++ FCK++ ++EA +F +K + PT +N+L+ AY + +
Sbjct: 358 VSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKI 417
Query: 461 KIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTA 520
L EM+ G+ P +Y CLI+ R + + A F ++ G+ P ++
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI-EAAKKLFDQLTSKGL-PDLVTFHI 475
Query: 521 LIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE- 579
L+ Y G KA + + M + G+KP TY ++ G+ + G+ + + M E
Sbjct: 476 LMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKER 535
Query: 580 KVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
++ ++N+L+ G++++G+ +A +++E + GL P +TY ++
Sbjct: 536 RLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 120/252 (47%), Gaps = 6/252 (2%)
Query: 415 LMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIG 474
LM A K N + E ++ EM + ++P TFN++++A + + +++ +M+ G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 475 LKPTANSYTCLISAY---GRQKKMSDMAADAFLK-MKKVGIKPTSHSYTALIHAYSVSGW 530
P SY LI Y G KM ADA LK M + + P ++ LI +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKM--YKADAVLKEMVENDVSPNLTTFNILIDGFWKDDN 311
Query: 531 HEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI 590
+ F+ M + +KP++ +Y +L++G G + + M+S V+ +T+N
Sbjct: 312 LPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNA 371
Query: 591 LVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN 650
L++GF K EA D+ G PT YNML++AY + G+ L +EM
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 651 LKPDSVTYSTMI 662
+ PD TY+ +I
Sbjct: 432 IVPDVGTYNCLI 443
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 172/364 (47%), Gaps = 11/364 (3%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGR--SAKDAW 359
D +N I GL R +A K+ M PD +T ++ + K+GR +AKD +
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 360 YFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEM-EKKGVFSNAIVYNTLMDA 418
Y + K + ++ F G + A + S+M G+ + YN+L+
Sbjct: 346 Y-------RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398
Query: 419 FCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPT 478
+ K V A + +M+ K KP ++ IL+ + + + N+L EM GLKP
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 479 ANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF 538
+ CLISA+ ++ ++ + A + F +M + G KP +++ +LI + A
Sbjct: 459 TVGFNCLISAFCKEHRIPE-AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 539 ENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQ 598
+M EG+ + TY TL++ F R G+ + K+ M+ + ++T+N L+ G +
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 599 GQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
G+ +AR + + + G P+ ++ N+L+N R G + + KEM PD VT+
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 637
Query: 659 STMI 662
+++I
Sbjct: 638 NSLI 641
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 185/413 (44%), Gaps = 7/413 (1%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D + L R++ + IY I L C R +A ++ E M PD T + +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ + K R +A +M +G + G ++ C G V A + + K
Sbjct: 294 ILGLCKFDR-INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM-KAKNVKPTAATFNILMHAYSRRMQPKIV 463
+ +++NTL+ F +++A+ + +M + + P T+N L++ Y + +
Sbjct: 353 I----VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 464 ENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIH 523
+L +M++ G KP SYT L+ + + K+ D A + +M G+KP + + LI
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI-DEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 524 AYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEG 583
A+ +A F M R+G KP + T+ +L+ G + + + + + M+SE V
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 584 TKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLL 643
VT+N L++ F ++G+ EAR +++E G +TYN L+ R G+ K L
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 644 KEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
++M P +++ + +I + K+M+ G D+ ++ L
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 170/386 (44%), Gaps = 7/386 (1%)
Query: 278 LGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKD-NIRP 336
L + G D LF +P ++ I+N I G + GR +DA V M I P
Sbjct: 332 LCKIGRVDAAKDLFYRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 337 DHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALII 396
D T + ++ K G A M KG K + +V FC G + A +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGL-ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 397 QSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR 456
+EM G+ N + +N L+ AFCK + + EA +F EM K KP TFN L+
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 457 RMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSH 516
+ K LL +M G+ +Y LI+A+ R+ ++ + A +M G
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE-ARKLVNEMVFQGSPLDEI 565
Query: 517 SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM 576
+Y +LI +G +KA FE M R+G PS + L++G R+G + ++ K M
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Query: 577 MSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQH 636
+ VTFN L++G + G+ + + + G+ P +T+N LM+ +GG
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Query: 637 SKLPQLLKEMAALNLKPDSVTYSTMI 662
LL E P+ T+S ++
Sbjct: 686 YDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 158/340 (46%), Gaps = 7/340 (2%)
Query: 358 AWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMD 417
A F++ ++RK + + G ++K+FCA + AL + +M K G N+++Y TL+
Sbjct: 202 ANVFYDMLSRK-IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 418 AFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKP 477
+ K N V EA L EM P A TFN ++ + + ++ M G P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
+Y L++ + ++ D A D F ++ KP + LIH + G + A
Sbjct: 321 DDITYGYLMNGLCKIGRV-DAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 538 FENMQRE-GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFA 596
+M GI P + TY +L+ G+ + G +++ M ++ + ++ ILVDGF
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 597 KQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSV 656
K G+ EA +V++E GL P + +N L++A+ + + + ++ +EM KPD
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 657 TYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
T++++I + MI G V + +Y L
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 172/373 (46%), Gaps = 4/373 (1%)
Query: 257 WMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCC 316
+ R +P +V F GR + D VL + S DV YN+ I G
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGR--LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEV 376
G A +V M +P+ + +I+V KLG+ +A+ +M+ G+K +
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK-IDEAYNVLNEMSADGLKPNTVG 461
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
++ +FC E + A+ I EM +KG + +N+L+ C+ + ++ A L +M
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMS 496
++ V T+N L++A+ RR + K L+ EM G +Y LI R ++
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV- 580
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
D A F KM + G P++ S LI+ SG E+A + M G P I T+ +L
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
++G RAG + + +++ + +E + VTFN L+ K G +A ++ E + G
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Query: 617 HPTVMTYNMLMNA 629
P T+++L+ +
Sbjct: 701 VPNHRTWSILLQS 713
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 116/290 (40%), Gaps = 11/290 (3%)
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM 470
VY L+ + + + L ++MK + + + F +M Y + P L+ EM
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 471 QDI-GLKPTANSYTCL--ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSV 527
+++ +PT SY + I G K+ AA+ F M I PT ++ ++ A+
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKV---AANVFYDMLSRKIPPTLFTFGVVMKAFCA 229
Query: 528 SGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVT 587
+ A +M + G P+ Y TL+ + +++ + M T
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289
Query: 588 FNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMA 647
FN ++ G K + EA +++ G P +TY LMN + G+ L +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 648 ALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKS-GQVMDVDSYQKL 696
KP+ V ++T+I+ M+ S G V DV +Y L
Sbjct: 350 ----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 161/355 (45%), Gaps = 38/355 (10%)
Query: 373 SEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAI---VYNTLMDAFCK-SNHVEEA 428
+E+ ++K++C GL+ RA ++ EM+ V I VYN ++ K + EEA
Sbjct: 189 TEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEA 248
Query: 429 EGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISA 488
+F MK KPT T+N++++ Y + + + L EM+ KP +YT L++A
Sbjct: 249 IDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNA 308
Query: 489 YGRQ---KKMSDM-------------------------------AADAFLKMKKVGIKPT 514
+ R+ +K ++ AA+ F M+ +G +P
Sbjct: 309 FAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPD 368
Query: 515 SHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK 574
SY ++ AY +G H A FE M+R GI P+++++ LL + +A D I K
Sbjct: 369 RASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVK 428
Query: 575 LMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGG 634
M VE N +++ + + GQ+ + +++E + TYN+L+N Y + G
Sbjct: 429 EMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAG 488
Query: 635 QHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMD 689
++ +L E+ N +PD VT+++ I ++MI SG D
Sbjct: 489 FLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 543
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 153/308 (49%), Gaps = 40/308 (12%)
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA 453
L+ + + K + I +N L+DA+ + +EAE L+V++ PT T+ +L+ A
Sbjct: 140 LVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKA 199
Query: 454 YSRRMQPKIVENLLAEMQD-------IGL------------------------------- 475
Y + E +L EMQ+ IG+
Sbjct: 200 YCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDR 259
Query: 476 -KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKA 534
KPT +Y +I+ YG+ K S M+ + +M+ KP +YTAL++A++ G EKA
Sbjct: 260 CKPTTETYNLMINLYGKASK-SYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 318
Query: 535 YVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDG 594
FE +Q +G++P + Y L++ + RAG +I+ LM E + ++NI+VD
Sbjct: 319 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 378
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
+ + G + +A V E ++G+ PT+ ++ +L++AY++ +K ++KEM+ ++PD
Sbjct: 379 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Query: 655 SVTYSTMI 662
+ ++M+
Sbjct: 439 TFVLNSML 446
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 166/377 (44%), Gaps = 38/377 (10%)
Query: 287 LMVLFRNLPSSKKFRDVHIYNAAISGLLC-CGRYEDAWKVYESMEKDNIRPDHVTCSIMV 345
++V +N S K V +YNA I GL+ G E+A V++ M++D +P T ++M+
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271
Query: 346 TVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGV 405
+ K +S + W K +C EM
Sbjct: 272 NLYGKASKSY--------------MSW---------KLYC-------------EMRSHQC 295
Query: 406 FSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVEN 465
N Y L++AF + E+AE +F +++ ++P +N LM +YSR P
Sbjct: 296 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 355
Query: 466 LLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAY 525
+ + MQ +G +P SY ++ AYGR SD A F +MK++GI PT S+ L+ AY
Sbjct: 356 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA-VFEEMKRLGIAPTMKSHMLLLSAY 414
Query: 526 SVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK 585
S + K + M G++P ++L+ + R G M KI M +
Sbjct: 415 SKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI 474
Query: 586 VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 645
T+NIL++ + K G ++ E + P V+T+ + AY+R + K ++ +E
Sbjct: 475 STYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEE 534
Query: 646 MAALNLKPDSVTYSTMI 662
M PD T ++
Sbjct: 535 MIDSGCAPDGGTAKVLL 551
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 4/261 (1%)
Query: 268 PRACT--VLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKV 325
P CT L R G+ +K +F L DV++YNA + G A ++
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 326 YESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFC 385
+ M+ PD + +IMV + G + DA FE+M R G+ + + ++ ++
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHS-DAEAVFEEMKRLGIAPTMKSHMLLLSAYS 415
Query: 386 AEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAA 445
V++ I EM + GV + V N++++ + + + E + EM+ +
Sbjct: 416 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 475
Query: 446 TFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLK 505
T+NIL++ Y + + +E L E+++ +P ++T I AY R KK+ + F +
Sbjct: 476 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR-KKLYVKCLEVFEE 534
Query: 506 MKKVGIKPTSHSYTALIHAYS 526
M G P + L+ A S
Sbjct: 535 MIDSGCAPDGGTAKVLLSACS 555
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 132/316 (41%), Gaps = 14/316 (4%)
Query: 267 TPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVY 326
T ++ L G+A L+ + S + ++ Y A ++ G E A +++
Sbjct: 263 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 322
Query: 327 ESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY------FFEKMNRKGVKWSEEVLGAI 380
E +++D + PD V V L S A Y F M G + +
Sbjct: 323 EQLQEDGLEPD-------VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 375
Query: 381 VKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV 440
V ++ GL S A + EM++ G+ + L+ A+ K+ V + E + EM V
Sbjct: 376 VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 435
Query: 441 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA 500
+P N +++ Y R Q +E +LAEM++ ++Y LI+ YG+ + +
Sbjct: 436 EPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERI-E 494
Query: 501 DAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
+ F+++K+ +P ++T+ I AYS + K FE M G P T LL
Sbjct: 495 ELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSAC 554
Query: 561 RRAGDTQTMMKIWKLM 576
+ + + + M
Sbjct: 555 SSEEQVEQVTSVLRTM 570
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 179/358 (50%), Gaps = 2/358 (0%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
++ I+GL GR +A ++ + M + +PD +T + +V + G+ A +A +KM
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA-EAMLLIDKM 219
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
G + + G ++ C G + A+ + +ME++ + +A+ Y+ ++D CK +
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
+ A LF EM+ K + T+NIL+ + + LL +M + P +++ L
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
I ++ ++ K+ + A + +M GI P + +YT+LI + +KA + M +G
Sbjct: 340 IDSFVKEGKLRE-AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
P+I T+ L++G+ +A +++++ M V VT+N L+ GF + G+ A+
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 606 DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
++ E + P ++TY +L++ G+ K ++ +++ ++ D Y+ +I+
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 178/400 (44%), Gaps = 10/400 (2%)
Query: 268 PRACTV--LFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKV 325
P A T + ++ ++G M L R + D Y+ I GL G ++A+ +
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Query: 326 YESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFC 385
+ ME I + +T +I++ GR D M ++ + + ++ SF
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGR-WDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 386 AEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAA 445
EG + A + EM +G+ + I Y +L+D FCK NH+++A + M +K P
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 446 TFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLK 505
TFNIL++ Y + + L +M G+ +Y LI + K+ ++A + F +
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL-NVAKELFQE 463
Query: 506 MKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGD 565
M + P +Y L+ +G EKA FE +++ ++ I Y ++ G A
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
Query: 566 TQTMMKIWKLMMSEKVEGTK---VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMT 622
W L S ++G K T+NI++ G K+G EA + + + G P T
Sbjct: 524 VDDA---WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580
Query: 623 YNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
YN+L+ A+ G +K +L++E+ D+ T +I
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 178/387 (45%), Gaps = 6/387 (1%)
Query: 280 RAGM----GDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIR 335
R+G+ D + LFR++ S+ V ++ S + +Y+ + + ME I
Sbjct: 61 RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIA 120
Query: 336 PDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALI 395
+ T SIM+ + R A+ K+ + G + + ++ C EG VS AL
Sbjct: 121 HNLYTLSIMINCFCRC-RKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALE 179
Query: 396 IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYS 455
+ M + G + I NTL++ C S EA L +M +P A T+ +++
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 456 RRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTS 515
+ Q + LL +M++ +K A Y+ +I + + D A + F +M+ GI
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL-DNAFNLFNEMEMKGITTNI 298
Query: 516 HSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKL 575
+Y LI + +G + +M + I P++ T++ L+D F + G + ++ K
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 576 MMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQ 635
M+ + +T+ L+DGF K+ +A ++ G P + T+N+L+N Y + +
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 636 HSKLPQLLKEMAALNLKPDSVTYSTMI 662
+L ++M+ + D+VTY+T+I
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLI 445
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 182/421 (43%), Gaps = 2/421 (0%)
Query: 274 LFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDN 333
LF + + D ++ L + + +++ + I+ C + A+ + K
Sbjct: 94 LFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 153
Query: 334 IRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRA 393
P+ +T S ++ + GR + +A ++M G K + +V C G + A
Sbjct: 154 YEPNTITFSTLINGLCLEGRVS-EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA 453
+++ +M + G NA+ Y +++ CKS A L +M+ +N+K A ++I++
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 454 YSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKP 513
+ NL EM+ G+ +Y LI + + D A M K I P
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD-GAKLLRDMIKRKINP 331
Query: 514 TSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIW 573
+++ LI ++ G +A + M GI P TYT+L+DGF + ++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 574 KLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARG 633
LM+S+ + TFNIL++G+ K + + ++ + G+ +TYN L+ +
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 634 GQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSY 693
G+ + +L +EM + + P+ VTY ++ +++ KS +D+ Y
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 511
Query: 694 Q 694
Sbjct: 512 N 512
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 149/334 (44%), Gaps = 1/334 (0%)
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
++M KG+ + L ++ FC + A ++ K G N I ++TL++ C
Sbjct: 112 KQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLE 171
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY 482
V EA L M KP T N L++ + L+ +M + G +P A +Y
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Query: 483 TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ 542
+++ + + + +A + KM++ IK + Y+ +I G + A+ F M+
Sbjct: 232 GPVLNVMCKSGQTA-LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 543 REGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYM 602
+GI +I TY L+ GF AG K+ + M+ K+ VTF++L+D F K+G+
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 603 EARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
EA ++ E G+ P +TY L++ + + K Q++ M + P+ T++ +I
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 663 YXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
++M G V D +Y L
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 181/419 (43%), Gaps = 3/419 (0%)
Query: 215 ENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQEPSLVTPRACTVL 274
E + L + + +YG + + VL V+ K + + M + L + +++
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY-SII 269
Query: 275 FPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNI 334
L + G D LF + ++ YN I G GR++D K+ M K I
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 335 RPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRAL 394
P+ VT S+++ K G+ ++A ++M +G+ +++ FC E + +A
Sbjct: 330 NPNVVTFSVLIDSFVKEGK-LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 395 IIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAY 454
+ M KG N +N L++ +CK+N +++ LF +M + V T+N L+ +
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 455 SRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPT 514
+ + + L EM + P +Y L+ + S+ A + F K++K ++
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE-SEKALEIFEKIEKSKMELD 507
Query: 515 SHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK 574
Y +IH + + A+ F ++ +G+KP ++TY ++ G + G +++
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 575 LMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARG 633
M + T+NIL+ G ++ +I E + G T M+++ + G
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG 626
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 181/398 (45%), Gaps = 2/398 (0%)
Query: 266 VTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKV 325
V+P + L LGRA M K + +F K YN+ I L+ G++E +V
Sbjct: 160 VSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEV 219
Query: 326 YESM-EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSF 384
Y M + + PD +T S +++ KLGR+ A F++M ++ +E++ ++ +
Sbjct: 220 YTEMCNEGDCFPDTITYSALISSYEKLGRN-DSAIRLFDEMKDNCMQPTEKIYTTLLGIY 278
Query: 385 CAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTA 444
G V +AL + EM++ G Y L+ K+ V+EA G + +M + P
Sbjct: 279 FKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDV 338
Query: 445 ATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFL 504
N LM+ + + + + N+ +EM PT SY +I A K + F
Sbjct: 339 VFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFD 398
Query: 505 KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAG 564
KMK + P+ +Y+ LI Y + EKA + E M +G P Y +L++ +A
Sbjct: 399 KMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 458
Query: 565 DTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYN 624
+ +++K + + + +++ F K G+ EA D+ +E G P V YN
Sbjct: 459 RYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 625 MLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
LM+ + G ++ LL++M + D +++ ++
Sbjct: 519 ALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 180/401 (44%), Gaps = 6/401 (1%)
Query: 263 PSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDA 322
P +T A + LGR D + LF + + IY + G+ E A
Sbjct: 231 PDTITYSALISSYEKLGR---NDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 323 WKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVK 382
++E M++ P T + ++ + K GR +A+ F++ M R G+ L ++
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGR-VDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Query: 383 SFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSN-HVEEAEGLFVEMKAKNVK 441
G V + SEM + YNT++ A +S HV E F +MKA +V
Sbjct: 347 ILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
P+ T++IL+ Y + + + LL EM + G P +Y LI+A G+ K+ + A +
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY-EAANE 465
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFR 561
F ++K+ +S Y +I + G +A F M+ +G P + Y L+ G
Sbjct: 466 LFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMV 525
Query: 562 RAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVM 621
+AG + + M + NI+++GFA+ G A ++ G+ P +
Sbjct: 526 KAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGV 585
Query: 622 TYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
TYN L+ +A G + ++++EM + D++TYS+++
Sbjct: 586 TYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 174/364 (47%), Gaps = 3/364 (0%)
Query: 267 TPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVY 326
T + T L + + G +K + LF + + V+ Y I GL GR ++A+ Y
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFY 326
Query: 327 ESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKS-FC 385
+ M +D + PD V + ++ ++ K+GR ++ F +M + ++K+ F
Sbjct: 327 KDMLRDGLTPDVVFLNNLMNILGKVGR-VEELTNVFSEMGMWRCTPTVVSYNTVIKALFE 385
Query: 386 AEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAA 445
++ VS +M+ V + Y+ L+D +CK+N VE+A L EM K P A
Sbjct: 386 SKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPA 445
Query: 446 TFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLK 505
+ L++A + + + L E+++ ++ Y +I +G+ K+S+ A D F +
Sbjct: 446 AYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSE-AVDLFNE 504
Query: 506 MKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGD 565
MK G P ++Y AL+ +G +A M+ G + I ++ +L+GF R G
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Query: 566 TQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNM 625
+ +++++ + ++ VT+N L+ FA G + EA ++ E G +TY+
Sbjct: 565 PRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSS 624
Query: 626 LMNA 629
+++A
Sbjct: 625 ILDA 628
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 266 VTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKV 325
V+ R V+ G+ G + + LF + + DV+ YNA +SG++ G +A +
Sbjct: 477 VSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSL 536
Query: 326 YESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFC 385
ME++ R D + +I++ + G + A FE + G+K ++ F
Sbjct: 537 LRKMEENGCRADINSHNIILNGFARTG-VPRRAIEMFETIKHSGIKPDGVTYNTLLGCFA 595
Query: 386 AEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
G+ A + EM+ KG +AI Y++++DA +H
Sbjct: 596 HAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDH 634
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 90/187 (48%), Gaps = 5/187 (2%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAK--DAWYFFE 363
Y + I+ L RYE A ++++ + K+N +V+ + +++ G+ K +A F
Sbjct: 447 YCSLINALGKAKRYEAANELFKEL-KENF--GNVSSRVYAVMIKHFGKCGKLSEAVDLFN 503
Query: 364 KMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSN 423
+M +G A++ G+++ A + +ME+ G ++ +N +++ F ++
Sbjct: 504 EMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTG 563
Query: 424 HVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYT 483
A +F +K +KP T+N L+ ++ + ++ EM+D G + A +Y+
Sbjct: 564 VPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYS 623
Query: 484 CLISAYG 490
++ A G
Sbjct: 624 SILDAVG 630
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 80/216 (37%), Gaps = 35/216 (16%)
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE 544
L+ A GR K +S A F + K KPTS +Y ++I G HEK + + M E
Sbjct: 168 LVKALGRAKMVSK-ALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNE 226
Query: 545 GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA 604
G D F DT +T++ L+ + K G+ A
Sbjct: 227 G------------DCF---PDT-------------------ITYSALISSYEKLGRNDSA 252
Query: 605 RDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYX 664
+ E + PT Y L+ Y + G+ K L +EM P TY+ +I
Sbjct: 253 IRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKG 312
Query: 665 XXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKLRAIL 700
++K M++ G DV L IL
Sbjct: 313 LGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNIL 348
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 169/390 (43%), Gaps = 35/390 (8%)
Query: 307 NAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMN 366
NA ++GL G+ DA + + M + +P+ VT ++ VM K G++A A KM
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL-AMELLRKME 239
Query: 367 RKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVE 426
+ +K I+ C +G + A + +EME KG ++ I+Y TL+ FC + +
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 427 EAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLI 486
+ L +M + + P F+ L+ + + + + E L EM G+ P +YT LI
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 487 SAYGRQKKMS----------------------------------DMAADAFLKMKKVGIK 512
+ ++ ++ D + F KM G+
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI 572
+ +Y LI + G E A F+ M ++P I +Y LLDG G+ + ++I
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 573 WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
++ + K+E +NI++ G + +A D+ G+ P V TYN+++ +
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 633 GGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
G S+ L ++M P+ TY+ +I
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 178/362 (49%), Gaps = 2/362 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D ++ I+GL GR +A ++ + M + +P +T + +V + G+ + DA
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS-DAVLL 199
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
++M G + +E G ++K C G + A+ + +ME++ + +A+ Y+ ++D CK
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
++ A LF EM+ K K + L+ + + LL +M + P +
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
++ LI + ++ K+ + A + +M + GI P + +YT+LI + +KA + M
Sbjct: 320 FSALIDCFVKEGKLRE-AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
+G P+I T+ L++G+ +A +++++ M V VT+N L+ GF + G+
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
A+++ E + P +++Y +L++ G+ K ++ +++ ++ D Y+ +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 662 IY 663
I+
Sbjct: 499 IH 500
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 178/411 (43%), Gaps = 7/411 (1%)
Query: 254 FFQWMRAQEPSLVTPRAC--TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAIS 311
FQ M P PR + LF ++ R D ++ L + + +++ + I+
Sbjct: 59 LFQEMTRSRPR---PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 312 GLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVK 371
C + A+ + K PD VT S ++ + GR + +A ++M G K
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVS-EALELVDRMVEMGHK 174
Query: 372 WSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGL 431
+ L A+V C G VS A+++ M + G N + Y ++ CKS A L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 432 FVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGR 491
+M+ + +K A ++I++ + NL EM+ G K YT LI +
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 492 QKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIE 551
+ D A M K I P +++ALI + G +A + M + GI P
Sbjct: 295 AGRWDD-GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 552 TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF 611
TYT+L+DGF + + LM+S+ TFNIL++G+ K + ++ +
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 612 GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
G+ +TYN L+ + G+ +L +EM + ++PD V+Y ++
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 169/380 (44%), Gaps = 12/380 (3%)
Query: 288 MVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTV 347
M L R + K D Y+ I GL G ++A+ ++ ME + D + I T+
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII---IYTTL 288
Query: 348 MRKLGRSAK--DAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGV 405
+R + + D M ++ + A++ F EG + A + EM ++G+
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 406 FSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVEN 465
+ + Y +L+D FCK N +++A + M +K P TFNIL++ Y +
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 466 LLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAY 525
L +M G+ +Y LI + K+ ++A + F +M ++P SY L+
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKL-EVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 526 SVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK 585
+G EKA FE +++ ++ I Y ++ G A W L S ++G K
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA---WDLFCSLPLKGVK 524
Query: 586 ---VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQL 642
T+NI++ G K+G EA + + + G P TYN+L+ A+ G +K +L
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Query: 643 LKEMAALNLKPDSVTYSTMI 662
++E+ D+ T ++
Sbjct: 585 IEEIKRCGFSVDASTVKMVV 604
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 163/379 (43%), Gaps = 2/379 (0%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
+Y+ + + ME I + T SIM+ + R A+ K+ + G +
Sbjct: 87 QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRC-RKLSLAFSAMGKIIKLGYEPDTVTF 145
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
++ C EG VS AL + M + G I N L++ C + V +A L M
Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
+P T+ ++ + Q + LL +M++ +K A Y+ +I + + D
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL-D 264
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
A + F +M+ G K YT LI + +G + +M + I P + ++ L+
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
D F + G + ++ K M+ + VT+ L+DGF K+ Q +A ++ G
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXY 677
P + T+N+L+N Y + +L ++M+ + D+VTY+T+I
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 678 HKQMIKSGQVMDVDSYQKL 696
++M+ D+ SY+ L
Sbjct: 445 FQEMVSRRVRPDIVSYKIL 463
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 161/362 (44%), Gaps = 2/362 (0%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
+++ L + G D LF + D+ IY I G GR++D K+ M K
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
I PD V S ++ K G+ ++A ++M ++G+ +++ FC E +
Sbjct: 311 RKITPDVVAFSALIDCFVKEGK-LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILM 451
+A + M KG N +N L++ +CK+N +++ LF +M + V T+N L+
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI 511
+ + ++ + L EM ++P SY L+ + + A + F K++K +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE-PEKALEIFEKIEKSKM 488
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMK 571
+ Y +IH + + A+ F ++ +G+KP ++TY ++ G + G
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 572 IWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYA 631
+++ M + T+NIL+ +G ++ +I E + G T M+++ +
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS 608
Query: 632 RG 633
G
Sbjct: 609 DG 610
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 164/377 (43%), Gaps = 2/377 (0%)
Query: 320 EDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGA 379
+DA +++ M + RP + S + +V+ + + ++M KG+ + L
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVART-KQYDLVLDLCKQMELKGIAHNLYTLSI 112
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
++ C +S A ++ K G + + ++TL++ C V EA L M
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
KPT T N L++ + L+ M + G +P +Y ++ + + + +A
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA-LA 231
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
+ KM++ IK + Y+ +I G + A+ F M+ +G K I YTTL+ G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 560 FRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPT 619
F AG K+ + M+ K+ V F+ L+D F K+G+ EA ++ E + G+ P
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 620 VMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHK 679
+TY L++ + + Q K +L M + P+ T++ +I +
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 680 QMIKSGQVMDVDSYQKL 696
+M G V D +Y L
Sbjct: 412 KMSLRGVVADTVTYNTL 428
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 180/406 (44%), Gaps = 7/406 (1%)
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLF-RNLPSSKKFRDVHIYNAAISGLLCCGRYE 320
E ++ R+ V+F G+A + DK + LF R + + R V +N+ ++ ++ G Y
Sbjct: 106 ENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYH 165
Query: 321 DAWKVYESMEKDN----IRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEV 376
+ Y+ + N I P+ ++ ++++ + KL R A F M +
Sbjct: 166 RGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL-RFVDRAIEVFRGMPERKCLPDGYT 224
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
++ C E + A+++ EM+ +G + ++YN L+D CK + L M
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMS 496
K P T+N L+H + + +LL M P +Y LI+ +Q++ +
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
D A M++ G H Y+ LI G E+A + M +G KP+I Y+ L
Sbjct: 345 D-AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
+DG R G +I M++ T++ L+ GF K G EA V E K G
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
Y++L++ G+ + + +M + +KPD+V YS++I
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 161/362 (44%), Gaps = 9/362 (2%)
Query: 306 YNAAISGLLCCGRYED-AWKVYESMEKDNIRPDHVT-CSIMVTVMRKLGRSAKDAWYFFE 363
+N I L C R+ D A +V+ M + PD T C++M + ++ +A +
Sbjct: 190 FNLVIKAL-CKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE--ERIDEAVLLLD 246
Query: 364 KMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSN 423
+M +G S + ++ C +G ++R + M KG N + YNTL+ C
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 306
Query: 424 HVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYT 483
+++A L M + P T+ L++ ++ + LL+ M++ G + Y+
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 484 CLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQR 543
LIS ++ K ++ A + KM + G KP Y+ L+ G +A M
Sbjct: 367 VLISGLFKEGK-AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 544 EGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYME 603
G P+ TY++L+ GF + G + +++WK M K +++L+DG G+ E
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKE 485
Query: 604 ARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAAL---NLKPDSVTYST 660
A V S+ IG+ P + Y+ ++ G +L EM +PD VTY+
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545
Query: 661 MI 662
++
Sbjct: 546 LL 547
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 157/362 (43%), Gaps = 6/362 (1%)
Query: 305 IYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEK 364
IYN I GL G K+ ++M P+ VT + ++ + G+ K A E+
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK-AVSLLER 317
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
M ++ G ++ + + A+ + S ME++G N +Y+ L+ K
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 377
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
EEA L+ +M K KP +++L+ R +P + +L M G P A +Y+
Sbjct: 378 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE 544
L+ + + + + A + +M K G Y+ LI G ++A + + M
Sbjct: 438 LMKGFFKTG-LCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTI 496
Query: 545 GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE---KVEGTKVTFNILVDGFAKQGQY 601
GIKP Y++++ G G +K++ M+ + K + VT+NIL+DG Q
Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDI 556
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYA-RGGQHSKLPQLLKEMAALNLKPDSVTYST 660
A D+++ G P V+T N +N + + K L+E+ LK V+ +
Sbjct: 557 SRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGAC 616
Query: 661 MI 662
I
Sbjct: 617 TI 618
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 106/234 (45%), Gaps = 8/234 (3%)
Query: 436 KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
K + K +T + ++ +Y+ VE LL+ ++ S+ + AYG+ +
Sbjct: 69 KMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAH-L 127
Query: 496 SDMAADAFLKM-KKVGIKPTSHSYTALIHAYSVSGWHEKA-----YVAFENMQREGIKPS 549
D A D F +M + K + S+ ++++ G + + YV NM I P+
Sbjct: 128 PDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN-ISPN 186
Query: 550 IETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVIS 609
++ ++ + +++++ M K T+ L+DG K+ + EA ++
Sbjct: 187 GLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLD 246
Query: 610 EFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
E G P+ + YN+L++ + G +++ +L+ M P+ VTY+T+I+
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 148/323 (45%), Gaps = 2/323 (0%)
Query: 340 TCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSE 399
TC+ M+ +R G+ ++ Y F+ M ++ +K I KS +G + +A +
Sbjct: 120 TCNYMLEALRVDGK-LEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRK 178
Query: 400 MEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQ 459
M + G NA YN L+ KS EA ++ M + +P+ T++ LM +R
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD 238
Query: 460 PKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYT 519
V LL EM+ +GLKP ++T I GR K+++ A + +M G P +YT
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE-AYEILKRMDDEGCGPDVVTYT 297
Query: 520 ALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE 579
LI A + + A FE M+ KP TY TLLD F D ++ + W M +
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357
Query: 580 KVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKL 639
VTF ILVD K G + EA D + G+ P + TYN L+ R +
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417
Query: 640 PQLLKEMAALNLKPDSVTYSTMI 662
+L M +L +KP + TY I
Sbjct: 418 LELFGNMESLGVKPTAYTYIVFI 440
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 168/362 (46%), Gaps = 4/362 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVT-CSIMVTVMRKLGRSAKDAWY 360
+ + YN I LL +A +VY M + RP T S+MV + ++ R
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR--RDIDSVMG 244
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
++M G+K + ++ G ++ A I M+ +G + + Y L+DA C
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
+ ++ A+ +F +MK KP T+ L+ +S V+ +EM+ G P
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
++T L+ A + + A D M+ GI P H+Y LI + A F N
Sbjct: 365 TFTILVDALCKAGNFGE-AFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
M+ G+KP+ TY +D + ++GD+ + ++ ++ M ++ + V N + AK G+
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
EA+ + IGL P +TYNM+M Y++ G+ + +LL EM +PD + ++
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 661 MI 662
+I
Sbjct: 544 LI 545
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 177/415 (42%), Gaps = 8/415 (1%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T+ +LGRAG ++ + + + DV Y I L + + A +V+E M+
Sbjct: 262 TICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKT 321
Query: 332 DNIRPDHVTCSIMVTVMRKL--GRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGL 389
+PD VT +T++ + R F+ +M + G +V + C G
Sbjct: 322 GRHKPDRVT---YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN 378
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
A M +G+ N YNTL+ + + +++A LF M++ VKPTA T+ +
Sbjct: 379 FGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV 438
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA-DAFLKMKK 508
+ Y + +M+ G+ P N C S Y K D A F +K
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAP--NIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
+G+ P S +Y ++ YS G ++A M G +P + +L++ +A
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMN 628
K++ M K++ T VT+N L+ G K G+ EA ++ + G P +T+N L +
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
Query: 629 AYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIK 683
+ + + ++L +M + PD TY+T+I+ + QM K
Sbjct: 617 CLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 172/365 (47%), Gaps = 12/365 (3%)
Query: 303 VHIYNAAISGLLCCGRYEDAWKV---YESMEKDNIRPDHVTCSIMVTVMRKLGRSAK--D 357
+ Y++ + GL G+ D V + ME ++P+ T +I + R LGR+ K +
Sbjct: 223 LQTYSSLMVGL---GKRRDIDSVMGLLKEMETLGLKPNVYTFTICI---RVLGRAGKINE 276
Query: 358 AWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMD 417
A+ ++M+ +G ++ + C + A + +M+ + + Y TL+D
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 418 AFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKP 477
F + ++ + + EM+ P TF IL+ A + + L M+D G+ P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
++Y LI R ++ D A + F M+ +G+KPT+++Y I Y SG A
Sbjct: 397 NLHTYNTLICGLLRVHRLDD-ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAK 597
FE M+ +GI P+I L +AG + +I+ + + VT+N+++ ++K
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 598 QGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
G+ EA ++SE + G P V+ N L+N + + + ++ M + LKP VT
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 658 YSTMI 662
Y+T++
Sbjct: 576 YNTLL 580
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 175/399 (43%), Gaps = 39/399 (9%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVT-CSIMVTVMRK---------- 350
DV YN I GL+ G+ ++A + M+K + PD VT C+++ V++
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-LVYPDFVTLCTLLPGVVKASLIEDAYKII 700
Query: 351 -----------------------LGRSAKD-AWYFFEKMNRKGV-KWSEEVLGAIVKSFC 385
L + D A F E++ G+ + + +L I++ C
Sbjct: 701 TNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSC 760
Query: 386 AEGLVSRALIIQSEMEKK-GVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTA 444
VS A + + K GV YN L+ +++ +E A+ +F+++K+ P
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 445 ATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFL 504
AT+N L+ AY + + + L EM + ++ +IS + + D +
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 505 KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAG 564
M PT+ +Y LI S SG +A FE M G +P+ Y L++GF +AG
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 565 DTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYN 624
+ ++K M+ E V T+++LVD G+ E E + GL+P V+ YN
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 625 MLMNAYARGGQHSKLPQLLKEM-AALNLKPDSVTYSTMI 662
+++N + + + L EM + + PD TY+++I
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 133/287 (46%), Gaps = 8/287 (2%)
Query: 274 LFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKD- 332
L G++G D+L L++ + + + + +N ISGL+ G +DA +Y + D
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 333 NIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSR 392
+ P T ++ + K GR +A FE M G + + + ++ F G
Sbjct: 886 DFSPTACTYGPLIDGLSKSGR-LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 393 ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMH 452
A + M K+GV + Y+ L+D C V+E F E+K + P +N++++
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 453 AY--SRRMQPKIVENLLAEMQ-DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
S R++ +V L EM+ G+ P +Y LI G M + A + ++++
Sbjct: 1005 GLGKSHRLEEALV--LFNEMKTSRGITPDLYTYNSLILNLG-IAGMVEEAGKIYNEIQRA 1061
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
G++P ++ ALI YS+SG E AY ++ M G P+ TY L
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 130/284 (45%), Gaps = 3/284 (1%)
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVE-MKAK 438
++ ++ G + + EM +N I +N ++ K+ +V++A L+ + M +
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
+ PTA T+ L+ S+ + + L M D G +P Y LI+ +G+ + +D
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE-ADA 944
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
A F +M K G++P +Y+ L+ + G ++ F+ ++ G+ P + Y +++
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 559 GFRRAGDTQTMMKIWKLM-MSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
G ++ + + ++ M S + T+N L+ G EA + +E + GL
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
P V T+N L+ Y+ G+ + + M P++ TY +
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 137/325 (42%), Gaps = 4/325 (1%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
YN I GLL E A V+ ++ PD T + ++ K G+ + + +++M
Sbjct: 788 YNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK-IDELFELYKEM 846
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFS-NAIVYNTLMDAFCKSNH 424
+ + + ++ G V AL + ++ FS A Y L+D KS
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
+ EA+ LF M +P A +NIL++ + + + L M G++P +Y+
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ-R 543
L+ ++ D F ++K+ G+ P Y +I+ S E+A V F M+
Sbjct: 967 LVDCLCMVGRV-DEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS 1025
Query: 544 EGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYME 603
GI P + TY +L+ AG + KI+ + +E TFN L+ G++ G+
Sbjct: 1026 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1085
Query: 604 ARDVISEFGKIGLHPTVMTYNMLMN 628
A V G P TY L N
Sbjct: 1086 AYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 138/292 (47%), Gaps = 6/292 (2%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
+F + S+ DV YN + G+ ++ +++Y+ M + +T +I+++ +
Sbjct: 807 VFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV 866
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
K G +++ M+ + + G ++ G + A + M G N
Sbjct: 867 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNC 926
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENL--L 467
+YN L++ F K+ + A LF M + V+P T+++L+ M ++ E L
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC--MVGRVDEGLHYF 984
Query: 468 AEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV-GIKPTSHSYTALIHAYS 526
E+++ GL P Y +I+ G+ ++ + A F +MK GI P ++Y +LI
Sbjct: 985 KELKESGLNPDVVCYNLIINGLGKSHRLEE-ALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 527 VSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMS 578
++G E+A + +QR G++P++ T+ L+ G+ +G + +++ M++
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 5/260 (1%)
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVE--NLLAEMQDIGLKPTANSYTCLISAYGRQKKMS 496
N+ T T N ++ A R+ K+ E + MQ +K N+Y + + + +
Sbjct: 113 NLVHTTETCNYMLEAL--RVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLK 170
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
A A KM++ G ++SY LIH S + +A + M EG +PS++TY++L
Sbjct: 171 -QAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSL 229
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
+ G + D ++M + K M + ++ TF I + + G+ EA +++ G
Sbjct: 230 MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 289
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXX 676
P V+TY +L++A + ++ ++M KPD VTY T++
Sbjct: 290 GPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQ 349
Query: 677 YHKQMIKSGQVMDVDSYQKL 696
+ +M K G V DV ++ L
Sbjct: 350 FWSEMEKDGHVPDVVTFTIL 369
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 74/176 (42%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
+L G+AG D LF+ + D+ Y+ + L GR ++ ++ +++
Sbjct: 930 NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
+ PD V ++++ + K R + F E +G+ +++ + G+V
Sbjct: 990 SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATF 447
A I +E+++ G+ N +N L+ + S E A ++ M P T+
Sbjct: 1050 EAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 162/345 (46%), Gaps = 2/345 (0%)
Query: 319 YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLG 378
++ A + M N+ P + +++ + K G+ +K +F+ +N KG
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN-KGFVVDTRTSN 509
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
A++ C G + A IQ E+ +G + + YNTL+ C ++EA EM +
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
+KP T++IL+ + + + + G+ P +Y+ +I + ++ ++
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER-TEE 628
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
+ F +M ++P + Y LI AY SG A E+M+ +GI P+ TYT+L+
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP 618
G + +++ M E +E + L+DG+ K GQ ++ ++ E +HP
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
+TY +++ YAR G ++ +LL EM + PDS+TY IY
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 163/364 (44%), Gaps = 8/364 (2%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV+++ AI+ G+ E+A K++ ME+ + P+ VT + ++ + GR +A+ F
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR-YDEAFMF 317
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
EKM +G++ + +VK + A + EM KKG N IVYN L+D+F +
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ + +A + M +K + T++T+N L+ Y + Q E LL EM IG S
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 482 YT---CLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF 538
+T CL+ ++ M D A +M + P T LI G H KA +
Sbjct: 438 FTSVICLLCSH----LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 539 ENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQ 598
+G T LL G AG +I K ++ +V++N L+ G +
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553
Query: 599 GQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
+ EA + E K GL P TY++L+ + + Q + + PD TY
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 659 STMI 662
S MI
Sbjct: 614 SVMI 617
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 152/334 (45%), Gaps = 4/334 (1%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T L L + G K + L+ + D NA + GL G+ ++A+++ + +
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKD-AWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLV 390
D V+ + +++ G+ D A+ F ++M ++G+K ++ V
Sbjct: 534 RGCVMDRVSYNTLISGC--CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 391 SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
A+ + ++ G+ + Y+ ++D CK+ EE + F EM +KNV+P +N L
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 451 MHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVG 510
+ AY R + + L +M+ G+ P + +YT LI ++ + A F +M+ G
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE-AKLLFEEMRMEG 710
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
++P YTALI Y G K M + + P+ TYT ++ G+ R G+
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA 604
++ M + + +T+ + G+ KQG +EA
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 144/342 (42%), Gaps = 43/342 (12%)
Query: 393 ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMH 452
AL + + KG+F + N L+ + ++N ++ F ++ K V P F ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 453 AYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFL---KMKKV 509
A+ + + + L ++M++ G+ P ++ +I G M +AF+ KM +
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLG----MCGRYDEAFMFKEKMVER 324
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
G++PT +Y+ L+ + + AY + M ++G P++ Y L+D F AG
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTY------ 623
++I LM+S+ + T T+N L+ G+ K GQ A ++ E IG + ++
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 444
Query: 624 --------------------NM---------LMNAYARGGQHSKLPQLLKEMAALNLKPD 654
NM L++ + G+HSK +L + D
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504
Query: 655 SVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+ T + +++ K+++ G VMD SY L
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 2/227 (0%)
Query: 474 GLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEK 533
G+ P+ + L+++ R + +AF + K G+ P + +T I+A+ G E+
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQK-CCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEE 278
Query: 534 AYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVD 593
A F M+ G+ P++ T+ T++DG G + M+ +E T +T++ILV
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338
Query: 594 GFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKP 653
G + + +A V+ E K G P V+ YN L++++ G +K ++ M + L
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 654 DSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKLRAIL 700
S TY+T+I K+M+ G ++ S+ + +L
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 162/345 (46%), Gaps = 2/345 (0%)
Query: 319 YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLG 378
++ A + M N+ P + +++ + K G+ +K +F+ +N KG
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN-KGFVVDTRTSN 509
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
A++ C G + A IQ E+ +G + + YNTL+ C ++EA EM +
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
+KP T++IL+ + + + + G+ P +Y+ +I + ++ ++
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER-TEE 628
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
+ F +M ++P + Y LI AY SG A E+M+ +GI P+ TYT+L+
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP 618
G + +++ M E +E + L+DG+ K GQ ++ ++ E +HP
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
+TY +++ YAR G ++ +LL EM + PDS+TY IY
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 163/364 (44%), Gaps = 8/364 (2%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV+++ AI+ G+ E+A K++ ME+ + P+ VT + ++ + GR +A+ F
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR-YDEAFMF 317
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
EKM +G++ + +VK + A + EM KKG N IVYN L+D+F +
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ + +A + M +K + T++T+N L+ Y + Q E LL EM IG S
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 482 YT---CLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF 538
+T CL+ ++ M D A +M + P T LI G H KA +
Sbjct: 438 FTSVICLLCSH----LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 539 ENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQ 598
+G T LL G AG +I K ++ +V++N L+ G +
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553
Query: 599 GQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
+ EA + E K GL P TY++L+ + + Q + + PD TY
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 659 STMI 662
S MI
Sbjct: 614 SVMI 617
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 152/334 (45%), Gaps = 4/334 (1%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T L L + G K + L+ + D NA + GL G+ ++A+++ + +
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKD-AWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLV 390
D V+ + +++ G+ D A+ F ++M ++G+K ++ V
Sbjct: 534 RGCVMDRVSYNTLISGC--CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 391 SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
A+ + ++ G+ + Y+ ++D CK+ EE + F EM +KNV+P +N L
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 451 MHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVG 510
+ AY R + + L +M+ G+ P + +YT LI ++ + A F +M+ G
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE-AKLLFEEMRMEG 710
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
++P YTALI Y G K M + + P+ TYT ++ G+ R G+
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA 604
++ M + + +T+ + G+ KQG +EA
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 144/342 (42%), Gaps = 43/342 (12%)
Query: 393 ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMH 452
AL + + KG+F + N L+ + ++N ++ F ++ K V P F ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 453 AYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFL---KMKKV 509
A+ + + + L ++M++ G+ P ++ +I G M +AF+ KM +
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLG----MCGRYDEAFMFKEKMVER 324
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
G++PT +Y+ L+ + + AY + M ++G P++ Y L+D F AG
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTY------ 623
++I LM+S+ + T T+N L+ G+ K GQ A ++ E IG + ++
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 444
Query: 624 --------------------NM---------LMNAYARGGQHSKLPQLLKEMAALNLKPD 654
NM L++ + G+HSK +L + D
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504
Query: 655 SVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+ T + +++ K+++ G VMD SY L
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 2/227 (0%)
Query: 474 GLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEK 533
G+ P+ + L+++ R + +AF + K G+ P + +T I+A+ G E+
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQK-CCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEE 278
Query: 534 AYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVD 593
A F M+ G+ P++ T+ T++DG G + M+ +E T +T++ILV
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338
Query: 594 GFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKP 653
G + + +A V+ E K G P V+ YN L++++ G +K ++ M + L
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 654 DSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKLRAIL 700
S TY+T+I K+M+ G ++ S+ + +L
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 184/435 (42%), Gaps = 11/435 (2%)
Query: 265 LVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWK 324
L + R C ++ +L + M +K ++ + V +N + G E K
Sbjct: 200 LPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDK 259
Query: 325 VYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSF 384
++ M++ NI VT +I++ K G+ ++A F M R G + +++ +
Sbjct: 260 IWLEMKRRNIEFSEVTYNILINGFSKNGK-MEEARRFHGDMRRSGFAVTPYSFNPLIEGY 318
Query: 385 CAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTA 444
C +GL A + EM G++ YN + A C +++A L M A P
Sbjct: 319 CKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDV 374
Query: 445 ATFNILMHAYSRRMQPKIVEN--LLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADA 502
++N LMH Y + K VE L +++ + P+ +Y LI + + A
Sbjct: 375 VSYNTLMHGYIK--MGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL-EGAQRL 431
Query: 503 FLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR 562
+M I P +YT L+ + +G A ++ M R+GIKP YTT G R
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELR 491
Query: 563 AGDTQTMMKIWKLMMSEKVEGTKVT-FNILVDGFAKQGQYMEARDVISEFGKIGLHPTVM 621
GD+ ++ + M++ +T +N+ +DG K G ++A + + ++GL P +
Sbjct: 492 LGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHV 551
Query: 622 TYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQM 681
TY ++ Y GQ L EM L P +TY +IY Y +M
Sbjct: 552 TYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM 611
Query: 682 IKSGQVMDVDSYQKL 696
K G +V ++ L
Sbjct: 612 KKRGVRPNVMTHNAL 626
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 163/376 (43%), Gaps = 21/376 (5%)
Query: 326 YESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFC 385
+E M + P C+I++ V+R R A +E M G+ + ++ S
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRD-SRMMNKASAVYETMIEHGIMPTVITFNTMLDSCF 249
Query: 386 AEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAA 445
G + R I EM+++ + + + YN L++ F K+ +EEA +M+ T
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 446 TFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTA---NSYTCLISAYGR----QKKMSDM 498
+FN L+ Y ++ + EM + G+ PT N Y C + +GR ++ +S M
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
AA P SY L+H Y G +A + F++++ I PSI TY TL+D
Sbjct: 370 AA------------PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLID 417
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP 618
G +G+ + ++ + M ++ + +T+ LV GF K G A +V E + G+ P
Sbjct: 418 GLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKP 477
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEMAALN-LKPDSVTYSTMIYXXXXXXXXXXXXXY 677
Y R G K +L +EM A + PD Y+ I +
Sbjct: 478 DGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEF 537
Query: 678 HKQMIKSGQVMDVDSY 693
+++ + G V D +Y
Sbjct: 538 QRKIFRVGLVPDHVTY 553
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 159/392 (40%), Gaps = 40/392 (10%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
+N I G G ++DAW V + M I P T +I + + GR DA M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR-IDDARELLSSM 369
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
V ++ +K G A ++ ++ + + + YNTL+D C+S ++
Sbjct: 370 AAPDVVSYNTLMHGYIKM----GKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
E A+ L EM + + P T+ L+ + + + + EM G+KP +YT
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 485
Query: 486 I----------SAYGRQKKMS------------DMAADAFLKMK-------------KVG 510
A+ ++M ++ D K+ +VG
Sbjct: 486 AVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG 545
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
+ P +YT +I Y +G + A ++ M R+ + PS+ TY L+ G +AG +
Sbjct: 546 LVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAF 605
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAY 630
+ M V +T N L+ G K G EA + + + G+ P +Y ML++
Sbjct: 606 QYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKN 665
Query: 631 ARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ ++ +L KEM ++PD T+ +
Sbjct: 666 CDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%)
Query: 492 QKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIE 551
+K M++ +F KM + G P+ + ++ S KA +E M GI P++
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239
Query: 552 TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF 611
T+ T+LD +AGD + + KIW M +E ++VT+NIL++GF+K G+ EAR +
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299
Query: 612 GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ G T ++N L+ Y + G + EM + P + TY+ I
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYI 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 3/222 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESM-EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY 360
D + Y G L G + A++++E M D+ PD ++ + + K+G K A
Sbjct: 478 DGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVK-AIE 536
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
F K+ R G+ +++ + G A + EM +K ++ + I Y L+
Sbjct: 537 FQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHA 596
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
K+ +E+A EMK + V+P T N L++ + L +M++ G+ P
Sbjct: 597 KAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKY 656
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALI 522
SYT LIS +K ++ + +M I+P +++ AL
Sbjct: 657 SYTMLISKNCDFEKWEEVVK-LYKEMLDKEIEPDGYTHRALF 697
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
Y I G L G+++ A +Y+ M + + P +T +++ K GR + A+ + +M
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGR-LEQAFQYSTEM 611
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
++GV+ + A++ C G + A +ME++G+ N Y L+ C
Sbjct: 612 KKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKW 671
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENL 466
EE L+ EM K ++P T L + + + VE L
Sbjct: 672 EEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFL 712
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 182/396 (45%), Gaps = 11/396 (2%)
Query: 270 ACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESM 329
C + LL R + V + ++ + +V+ +N I+ L G+ + A M
Sbjct: 192 TCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIM 251
Query: 330 EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGL 389
E I+P VT + +V GR + A +M KG + + I+ C EG
Sbjct: 252 EVFGIKPTIVTYNTLVQGFSLRGR-IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR 310
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
S L EM++ G+ +++ YN L+ + +E A EM + + PT T+N
Sbjct: 311 ASEVL---REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNT 367
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFL---KM 506
L+H + + E L+ E+++ G+ + +Y LI+ Y + A AF +M
Sbjct: 368 LIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD----AKKAFALHDEM 423
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
GI+PT +YT+LI+ +A FE + +G+KP + TL+DG G+
Sbjct: 424 MTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNM 483
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
+ K M + VT+N L+ G +G++ EAR+++ E + G+ P ++YN L
Sbjct: 484 DRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTL 543
Query: 627 MNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
++ Y++ G + EM +L P +TY+ ++
Sbjct: 544 ISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 164/357 (45%), Gaps = 5/357 (1%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
YN + G GR E A + M+ +PD T + +++ M GR+++ +M
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE----VLREM 318
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
G+ +++ G + A + EM K+G+ YNTL+ N +
Sbjct: 319 KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI 378
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
E AE L E++ K + + T+NIL++ Y + K L EM G++PT +YT L
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSL 438
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
I R+ K + A + F K+ G+KP L+ + G ++A+ + M
Sbjct: 439 IYVLCRKNKTRE-ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
I P TY L+ G G + ++ M ++ +++N L+ G++K+G A
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF 557
Query: 606 DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
V E +G +PT++TYN L+ ++ + +LL+EM + + P+ ++ ++I
Sbjct: 558 MVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 163/351 (46%), Gaps = 43/351 (12%)
Query: 315 CCGRY---EDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVK 371
CC + ++A + + M++ P TC+ ++T++ +L R ++AW F+ M R +K
Sbjct: 164 CCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNR-IENAWVFYADMYRMEIK 222
Query: 372 WSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGL 431
SN +N +++ CK +++A+G
Sbjct: 223 -----------------------------------SNVYTFNIMINVLCKEGKLKKAKGF 247
Query: 432 FVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGR 491
M+ +KPT T+N L+ +S R + + +++EM+ G +P +Y ++S
Sbjct: 248 LGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCN 307
Query: 492 QKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIE 551
+ + A++ +MK++G+ P S SY LI S +G E A+ + M ++G+ P+
Sbjct: 308 EGR----ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFY 363
Query: 552 TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF 611
TY TL+ G + + + + + + VT+NIL++G+ + G +A + E
Sbjct: 364 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM 423
Query: 612 GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
G+ PT TY L+ R + + +L +++ +KPD V +T++
Sbjct: 424 MTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLM 474
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 175/371 (47%), Gaps = 10/371 (2%)
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFR-DVHIYNAAISGLLCCGRYE 320
+P++VT F L GR G +L++ + SK F+ D+ YN +S + GR
Sbjct: 257 KPTIVTYNTLVQGFSLRGRIE-GARLII---SEMKSKGFQPDMQTYNPILSWMCNEGR-- 310
Query: 321 DAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAI 380
A +V M++ + PD V+ +I++ G + A+ + ++M ++G+ + +
Sbjct: 311 -ASEVLREMKEIGLVPDSVSYNILIRGCSNNG-DLEMAFAYRDEMVKQGMVPTFYTYNTL 368
Query: 381 VKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV 440
+ E + A I+ E+ +KG+ +++ YN L++ +C+ ++A L EM +
Sbjct: 369 IHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGI 428
Query: 441 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA 500
+PT T+ L++ R+ + + + L ++ G+KP L+ + M D A
Sbjct: 429 QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNM-DRAF 487
Query: 501 DAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
+M + I P +Y L+ G E+A M+R GIKP +Y TL+ G+
Sbjct: 488 SLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY 547
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTV 620
+ GDT+ + M+S T +T+N L+ G +K + A +++ E G+ P
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPND 607
Query: 621 MTYNMLMNAYA 631
++ ++ A +
Sbjct: 608 SSFCSVIEAMS 618
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 455 SRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGR-----------------QKKMSD 497
S+ PK V LL E+ N + L+ A+ R Q +M D
Sbjct: 113 SKLSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVD 172
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
A + F MK+ G P + + ++ S E A+V + +M R IK ++ T+ ++
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
+ + G + +M ++ T VT+N LV GF+ +G+ AR +ISE G
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXY 677
P + TYN +++ G+ S ++L+EM + L PDSV+Y+ +I Y
Sbjct: 293 PDMQTYNPILSWMCNEGRAS---EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 678 HKQMIKSGQVMDVDSYQKL 696
+M+K G V +Y L
Sbjct: 350 RDEMVKQGMVPTFYTYNTL 368
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 166/338 (49%), Gaps = 5/338 (1%)
Query: 329 MEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEG 388
+EK+ ++PD + + ++ + G + A FEKM G K + ++K + G
Sbjct: 380 VEKNGLKPDTILFNAIINASSESG-NLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 389 -LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATF 447
L + ++ + + + N N L+ A+C +EEA + +M++ VKP TF
Sbjct: 439 KLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 498
Query: 448 NILMHAYSRRMQPKIVEN-LLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
N L AY+R E+ ++ M +KP + +++ Y + KM + A F +M
Sbjct: 499 NTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEE-ALRFFYRM 557
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
K++G+ P + +LI + + + M+ G+KP + T++TL++ + GD
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDM 617
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
+ +I+ M+ ++ F+IL G+A+ G+ +A ++++ K G+ P V+ Y +
Sbjct: 618 KRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQI 677
Query: 627 MNAYARGGQHSKLPQLLKEMAAL-NLKPDSVTYSTMIY 663
++ + G+ K Q+ K+M + L P+ TY T+I+
Sbjct: 678 ISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIW 715
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 175/362 (48%), Gaps = 2/362 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV ++GL+ GR ++A ++ ++ ++ +P +T + +VT + + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQ-KHFHSLLSL 376
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
K+ + G+K + AI+ + G + +A+ I +M++ G A +NTL+ + K
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 422 SNHVEEAEGLFVEM-KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
+EE+ L M + + ++P T NIL+ A+ + + + N++ +MQ G+KP
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
++ L AY R +M +KP + +++ Y G E+A F
Sbjct: 497 TFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYR 556
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
M+ G+ P++ + +L+ GF D + ++ LM V+ VTF+ L++ ++ G
Sbjct: 557 MKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGD 616
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
++ ++ + G+ P + +++L YAR G+ K Q+L +M ++P+ V Y+
Sbjct: 617 MKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQ 676
Query: 661 MI 662
+I
Sbjct: 677 II 678
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 177/396 (44%), Gaps = 6/396 (1%)
Query: 260 AQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRY 319
+PSL+T T L L R L+ L + + D ++NA I+ G
Sbjct: 349 GHKPSLIT---YTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNL 405
Query: 320 EDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGA 379
+ A K++E M++ +P T + ++ K+G+ + + + + ++ ++
Sbjct: 406 DQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNI 465
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFV-EMKAK 438
+V+++C + + A I +M+ GV + + +NTL A+ + AE + + M
Sbjct: 466 LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
VKP T +++ Y + + M+++G+ P + LI + M D
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDM-DG 584
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
+ M++ G+KP +++ L++A+S G ++ + +M GI P I ++ L
Sbjct: 585 VGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAK 644
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF-GKIGLH 617
G+ RAG+ + +I M V V + ++ G+ G+ +A V + G +GL
Sbjct: 645 GYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLS 704
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKP 653
P + TY L+ + Q K +LLK+M N+ P
Sbjct: 705 PNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 134/283 (47%), Gaps = 2/283 (0%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
+ E+AW + M+ ++PD VT + + ++G + +M VK +
Sbjct: 475 KIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTC 534
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
G IV +C EG + AL M++ GV N V+N+L+ F N ++ + M+
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 594
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
VKP TF+ LM+A+S K E + +M + G+ P ++++ L Y R + +
Sbjct: 595 FGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE-PE 653
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM-QREGIKPSIETYTTL 556
A +M+K G++P YT +I + +G +KA ++ M G+ P++ TY TL
Sbjct: 654 KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETL 713
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
+ GF A ++ K M + V T+ T ++ DG+ G
Sbjct: 714 IWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 131/288 (45%), Gaps = 1/288 (0%)
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
I Y TL+ A + H L +++ +KP FN +++A S + +
Sbjct: 355 ITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEK 414
Query: 470 MQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG 529
M++ G KPTA+++ LI YG+ K+ + + + ++ ++P + L+ A+
Sbjct: 415 MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQR 474
Query: 530 WHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMK-IWKLMMSEKVEGTKVTF 588
E+A+ MQ G+KP + T+ TL + R G T T I M+ KV+ T
Sbjct: 475 KIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTC 534
Query: 589 NILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA 648
+V+G+ ++G+ EA ++G+HP + +N L+ + + +++ M
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 594
Query: 649 LNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+KPD VT+ST++ + M++ G D+ ++ L
Sbjct: 595 FGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSIL 642
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 172/395 (43%), Gaps = 4/395 (1%)
Query: 303 VHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFF 362
V YNA +S L+ G ++ A KVY M I PD + +I + K R A
Sbjct: 111 VFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHA-ALRLL 169
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
M+ +G + + +V F E + + +M GV +N L+ CK
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK 229
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY 482
V+E E L ++ + V P T+N+ + +R + ++ + + G KP +Y
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY 289
Query: 483 TCLISAYGRQKKMSDMAADAFL-KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
LI YG K A+ +L KM G++P S++Y LI Y G + A +
Sbjct: 290 NNLI--YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
G P TY +L+DG G+T + ++ + + ++ + +N L+ G + QG
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
+EA + +E + GL P V T+N+L+N + G S L+K M + PD T++ +
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467
Query: 662 IYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
I+ M+ +G DV +Y L
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 164/362 (45%), Gaps = 3/362 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D + YN I+G G + A ++ + PD T ++ + G + + F
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
E + KG+K + + ++K +G++ A + +EM +KG+ +N L++ CK
Sbjct: 380 NEALG-KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
V +A+GL M +K P TFNIL+H YS +++ + +L M D G+ P +
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y L++ + K D+ + + M + G P ++ L+ + ++A E M
Sbjct: 499 YNSLLNGLCKTSKFEDV-METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM-MSEKVEGTKVTFNILVDGFAKQGQ 600
+ + + P T+ TL+DGF + GD +++ M + KV + T+NI++ F ++
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
A + E L P TY ++++ + + G + + L EM P T
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGR 677
Query: 661 MI 662
+I
Sbjct: 678 VI 679
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 132/310 (42%), Gaps = 5/310 (1%)
Query: 392 RALIIQSEMEKKGVFSNAI-VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKP--TAATFN 448
+AL + + M K+ F + + Y ++++ E E + V+M+ +NV +
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR-ENVGNHMLEGVYV 80
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK 508
M Y R+ + + N+ M +PT SY ++S D A +++M+
Sbjct: 81 GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVL-VDSGYFDQAHKVYMRMRD 139
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
GI P +S+T + ++ + A NM +G + ++ Y T++ GF
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAE 199
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMN 628
+++ M++ V TFN L+ K+G E ++ + K G+ P + TYN+ +
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ 259
Query: 629 AYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVM 688
+ G+ +++ + KPD +TY+ +IY Y +M+ G
Sbjct: 260 GLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319
Query: 689 DVDSYQKLRA 698
D +Y L A
Sbjct: 320 DSYTYNTLIA 329
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 148/299 (49%), Gaps = 1/299 (0%)
Query: 364 KMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSN 423
KM + G + S LG+++ FC A+ + M+ G N ++YNT+++ CK+
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 424 HVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYT 483
+ A +F M+ K ++ A T+N L+ S + LL +M + P +T
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 484 CLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQR 543
LI + ++ + + A + + +M + + P +Y +LI+ + + G A F+ M
Sbjct: 259 ALIDTFVKEGNLLE-ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 544 EGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYME 603
+G P + TY TL+ GF ++ + MK++ M + + G T+N L+ G+ + G+
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 604 ARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
A+ V + G+ P ++TYN+L++ G+ K +++++ + D +TY+ +I
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 151/326 (46%), Gaps = 8/326 (2%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
+V IYN I+GL +A +V+ MEK IR D VT + +++ + GR DA
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT-DAARL 241
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
M ++ + + A++ +F EG + A + EM ++ V N YN+L++ FC
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ +A+ +F M +K P T+N L+ + + + + L EM GL A +
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LI Y + K+ ++A F +M G+ P +Y L+ +G EKA V E++
Sbjct: 362 YNTLIHGYCQAGKL-NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK---VTFNILVDGFAKQ 598
Q+ + I TY ++ G R T + + W L S +G K + + ++ G ++
Sbjct: 421 QKSEMDVDIITYNIIIQGLCR---TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Query: 599 GQYMEARDVISEFGKIGLHPTVMTYN 624
G EA + + G P+ Y+
Sbjct: 478 GLQREADKLCRRMKEDGFMPSERIYD 503
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 151/350 (43%), Gaps = 2/350 (0%)
Query: 310 ISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKG 369
++G R+++A + +SM+ P+ V + ++ + K R +A F M +KG
Sbjct: 156 LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK-NRDLNNALEVFYCMEKKG 214
Query: 370 VKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAE 429
++ ++ G + A + +M K+ + N I + L+D F K ++ EA
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 430 GLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY 489
L+ EM ++V P T+N L++ + + + M G P +Y LI+ +
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 490 GRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPS 549
+ K++ D F +M G+ + +Y LIH Y +G A F M G+ P
Sbjct: 335 CKSKRVED-GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 393
Query: 550 IETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVIS 609
I TY LLD G + + + + + +++ +T+NI++ G + + EA +
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453
Query: 610 EFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
+ G+ P + Y +++ R G + +L + M P Y
Sbjct: 454 SLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 161/393 (40%), Gaps = 37/393 (9%)
Query: 304 HIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFE 363
H Y + L C +++DA+ ++ M + P V + ++TV+ K+ + Y +
Sbjct: 45 HHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNK-FDIVIYLYH 103
Query: 364 KMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSN 423
KM G+ ++ FC +S AL + +M K G + + +L++ FC+ N
Sbjct: 104 KMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGN 163
Query: 424 HVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYT 483
+EA +L+ M G P Y
Sbjct: 164 RFQEAV-----------------------------------SLVDSMDGFGFVPNVVIYN 188
Query: 484 CLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQR 543
+I+ + + +++ A + F M+K GI+ + +Y LI S SG A +M +
Sbjct: 189 TVINGLCKNRDLNN-ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 544 EGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYME 603
I P++ +T L+D F + G+ ++K M+ V T+N L++GF G +
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 604 ARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
A+ + G P V+TYN L+ + + + +L EM L D+ TY+T+I+
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 664 XXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+M+ G D+ +Y L
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 6/198 (3%)
Query: 253 YFFQWMRAQE--PSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAI 310
Y F M ++ P +VT F R G M LF + D YN I
Sbjct: 310 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG---MKLFCEMTYQGLVGDAFTYNTLI 366
Query: 311 SGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGV 370
G G+ A KV+ M + PD VT +I++ + G+ K A E + + +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK-ALVMVEDLQKSEM 425
Query: 371 KWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEG 430
I++ C + A + + +KGV +AI Y T++ C+ EA+
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 431 LFVEMKAKNVKPTAATFN 448
L MK P+ ++
Sbjct: 486 LCRRMKEDGFMPSERIYD 503
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 176/351 (50%), Gaps = 9/351 (2%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKD--AWYFFEKMNRKGVKWSEE 375
+++ + + ++ + D TC+++ M +S++ A F KM + G +
Sbjct: 87 KFDVVINLCDHLQIMGVSHDLYTCNLL---MNCFCQSSQPYLASSFLGKMMKLGFEPDIV 143
Query: 376 VLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM 435
+++ FC + A+ + ++M + G+ + ++Y T++D+ CK+ HV A LF +M
Sbjct: 144 TFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM 203
Query: 436 KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
+ ++P + L++ + + ++LL M +KP ++ LI A+ ++ K
Sbjct: 204 ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKF 263
Query: 496 SDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTT 555
D A + + +M ++ I P +YT+LI+ + + G ++A F M+ +G P + YT+
Sbjct: 264 LD-AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322
Query: 556 LLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIG 615
L++GF + MKI+ M + + G +T+ L+ GF + G+ A++V S G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 616 LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLK---PDSVTYSTMIY 663
+ P + TYN+L++ G+ K + ++M + P+ TY+ +++
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 162/348 (46%), Gaps = 5/348 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV +Y I L G A +++ ME IRPD V + +V + GR +DA
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR-WRDADSL 234
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
M ++ +K A++ +F EG A + +EM + + N Y +L++ FC
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
V+EA +F M+ K P + L++ + + + + EM GL +
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
YT LI +G+ K ++A + F M G+ P +Y L+H +G +KA + FE+M
Sbjct: 355 YTTLIQGFGQVGK-PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 542 QR---EGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQ 598
Q+ +G+ P+I TY LL G G + + +++ M +++ +T+ I++ G K
Sbjct: 414 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKA 473
Query: 599 GQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
G+ A ++ G+ P V+TY +++ R G + L ++M
Sbjct: 474 GKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 162/335 (48%), Gaps = 3/335 (0%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T + L + G + + LF + + DV +Y + ++GL GR+ DA + M K
Sbjct: 181 TTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK 240
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
I+PD +T + ++ K G+ DA + +M R + + +++ FC EG V
Sbjct: 241 RKIKPDVITFNALIDAFVKEGKFL-DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILM 451
A + ME KG F + + Y +L++ FCK V++A +F EM K + T+ L+
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISA--YGRQKKMSDMAADAFLKMKKV 509
+ + +P + + + + M G+ P +Y L+ Y + K + M + K +
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
G+ P +Y L+H +G EKA + FE+M++ + I TYT ++ G +AG +
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA 604
+ ++ + S+ V+ VT+ ++ G ++G EA
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEA 514
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 165/372 (44%), Gaps = 40/372 (10%)
Query: 329 MEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEG 388
M K PD VT + ++ LG ++A +M G+K + I+ S C G
Sbjct: 133 MMKLGFEPDIVTFTSLINGF-CLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
V+ AL + +ME G+ + ++Y +L++ C S +A+ L M + +KP TFN
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK 508
L+ A+ + + E L EM + + P +YT LI+ + + + D A F M+
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV-DEARQMFYLMET 310
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
G P +YT+LI+ + + A F M ++G+ + TYTTL+ GF + G
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGK---IGLHPTVMTYNM 625
+++ M+S V T+N+L+ G+ +A + + K G+ P + TYN+
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Query: 626 LMNAYARGGQHSKLPQLLKEM--------------------------AALNL-------- 651
L++ G+ K + ++M A+NL
Sbjct: 431 LLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490
Query: 652 -KPDSVTYSTMI 662
KP+ VTY+TMI
Sbjct: 491 VKPNVVTYTTMI 502
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 141/292 (48%), Gaps = 11/292 (3%)
Query: 381 VKSFCA------EGLVS----RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEG 430
V++FC GL S AL + + M + + I + L++ K +
Sbjct: 34 VRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVIN 93
Query: 431 LFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYG 490
L ++ V T N+LM+ + + QP + + L +M +G +P ++T LI+ +
Sbjct: 94 LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153
Query: 491 RQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSI 550
+M + A +M ++GIKP YT +I + +G A F+ M+ GI+P +
Sbjct: 154 LGNRMEE-AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDV 212
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE 610
YT+L++G +G + + + M K++ +TFN L+D F K+G++++A ++ +E
Sbjct: 213 VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNE 272
Query: 611 FGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
++ + P + TY L+N + G + Q+ M PD V Y+++I
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 172/370 (46%), Gaps = 16/370 (4%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
+++ + + GL GR DA K+++ M I P+ VT +I+++ + + G SA DA
Sbjct: 197 NLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRG-SADDARKL 255
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F +M G A++ FC G + A + EK G Y++L+D +
Sbjct: 256 FYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFR 315
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ +A L+ M KN+KP + IL+ S+ + + LL+ M G+ P
Sbjct: 316 ARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYC 375
Query: 482 YTCLISAY-GRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
Y +I A GR + + L+M + P + ++T LI + +G +A F
Sbjct: 376 YNAVIKALCGR--GLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTE 433
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTF--------NILV 592
+++ G PS+ T+ L+DG ++G+ +K +L++ + G + N
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGE----LKEARLLLHKMEVGRPASLFLRLSHSGNRSF 489
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLK 652
D + G ++A ++ F G P +++YN+L+N + R G +LL + L
Sbjct: 490 DTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLS 549
Query: 653 PDSVTYSTMI 662
PDSVTY+T+I
Sbjct: 550 PDSVTYNTLI 559
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 156/353 (44%), Gaps = 36/353 (10%)
Query: 252 LYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAIS 311
L++ P V A F LGR +L+ LF R Y++ I
Sbjct: 255 LFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG---YSSLID 311
Query: 312 GLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVK 371
GL RY A+++Y +M K NI+PD + +I++ + K G+ +DA M KG+
Sbjct: 312 GLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGK-IEDALKLLSSMPSKGIS 370
Query: 372 WSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGL 431
A++K+ C GL+ +Q EM + F +A + L+ + C++ V EAE +
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430
Query: 432 FVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGR 491
F E++ P+ ATFN L+ + + K LL +M+ GR
Sbjct: 431 FTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME-----------------VGR 473
Query: 492 QKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIE 551
A FL++ G + S+ ++ + S+ KAY + G P I
Sbjct: 474 -------PASLFLRLSHSG----NRSFDTMVESGSIL----KAYRDLAHFADTGSSPDIV 518
Query: 552 TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA 604
+Y L++GF RAGD +K+ ++ + + VT+N L++G + G+ EA
Sbjct: 519 SYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 142/341 (41%), Gaps = 3/341 (0%)
Query: 323 WKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVK 382
W+ E ++ + D ++++ K+G + K A F +M + I++
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEK-AVESFGRMKEFDCRPDVFTYNVILR 170
Query: 383 SFCAEGLVSR-ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK 441
E + A + +EM K N + LMD K +A+ +F +M + +
Sbjct: 171 VMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGIS 230
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
P T+ IL+ +R L EMQ G P + ++ L+ + + +M + A +
Sbjct: 231 PNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVE-AFE 289
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFR 561
+K G Y++LI + + +A+ + NM ++ IKP I YT L+ G
Sbjct: 290 LLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLS 349
Query: 562 RAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVM 621
+AG + +K+ M S+ + +N ++ +G E R + E + P
Sbjct: 350 KAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDAC 409
Query: 622 TYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
T+ +L+ + R G + ++ E+ P T++ +I
Sbjct: 410 THTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 2/252 (0%)
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRR-MQPKIVENLLAEM 470
+ ++D + N + E+K+ V + F +L+ AY++ M K VE+ M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESF-GRM 153
Query: 471 QDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW 530
++ +P +Y ++ R++ +A + +M K P +++ L+ G
Sbjct: 154 KEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213
Query: 531 HEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI 590
A F++M GI P+ TYT L+ G + G K++ M + V N
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNA 273
Query: 591 LVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN 650
L+DGF K G+ +EA +++ F K G + Y+ L++ R ++++ +L M N
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN 333
Query: 651 LKPDSVTYSTMI 662
+KPD + Y+ +I
Sbjct: 334 IKPDIILYTILI 345
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 118/313 (37%), Gaps = 57/313 (18%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T+L L +AG + + L ++PS D + YNA I L G E+ + M +
Sbjct: 342 TILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSE 401
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
PD T +I++ M C GLV
Sbjct: 402 TESFPDACTHTILICSM------------------------------------CRNGLVR 425
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILM 451
A I +E+EK G + +N L+D CKS ++EA L +M+ V A+ F L
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME---VGRPASLFLRLS 482
Query: 452 HAYSRRMQPKIVENL-------LAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFL 504
H+ +R + LA D G P SY LI+ + R + D L
Sbjct: 483 HSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDI-----DGAL 537
Query: 505 KMKKV----GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
K+ V G+ P S +Y LI+ G E+A+ F ++ + S Y +L+
Sbjct: 538 KLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWS 595
Query: 561 RRAGDTQTMMKIW 573
R +W
Sbjct: 596 CRKRKVLVAFNLW 608
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 197/444 (44%), Gaps = 40/444 (9%)
Query: 254 FFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGL 313
F + + P+L T +L +L RAG D L ++ + F +V N + L
Sbjct: 366 FEEMKKDAAPNLSTY---NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 314 LCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWS 373
+ ++A ++E M+ PD +T ++ + K+GR DA+ +EKM + +
Sbjct: 423 CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR-VDDAYKVYEKMLDSDCRTN 481
Query: 374 EEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFV 433
V +++K+F G I +M + + + NT MD K+ E+ +F
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 434 EMKAKNVKPTAATFNILMHA--------------YSRRMQPKIVEN-------------- 465
E+KA+ P A +++IL+H YS + Q +++
Sbjct: 542 EIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCG 601
Query: 466 -------LLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSY 518
LL EM+ G +PT +Y +I + ++ D A F + K I+ Y
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL-DEAYMLFEEAKSKRIELNVVIY 660
Query: 519 TALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMS 578
++LI + G ++AY+ E + ++G+ P++ T+ +LLD +A + + ++ M
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 579 EKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSK 638
K +VT+ IL++G K ++ +A E K G+ P+ ++Y +++ A+ G ++
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 639 LPQLLKEMAALNLKPDSVTYSTMI 662
L A PDS Y+ MI
Sbjct: 781 AGALFDRFKANGGVPDSACYNAMI 804
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 194/432 (44%), Gaps = 10/432 (2%)
Query: 256 QWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLC 315
Q + PS++ A + L + G D+ + +F + ++ YN I L
Sbjct: 334 QRAKGSIPSVI---AYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCR 389
Query: 316 CGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAK--DAWYFFEKMNRKGVKWS 373
G+ + A+++ +SM+K + P+ T +IMV +L +S K +A FE+M+ K
Sbjct: 390 AGKLDTAFELRDSMQKAGLFPNVRTVNIMVD---RLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 374 EEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFV 433
E +++ G V A + +M +N+IVY +L+ F E+ ++
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 434 EMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQK 493
+M +N P N M + +P+ + E++ P A SY+ LI +
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 494 KMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETY 553
++ + F MK+ G + +Y +I + G KAY E M+ +G +P++ TY
Sbjct: 567 -FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625
Query: 554 TTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGK 613
+++DG + +++ S+++E V ++ L+DGF K G+ EA ++ E +
Sbjct: 626 GSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685
Query: 614 IGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXX 673
GL P + T+N L++A + + ++ + M L P+ VTY +I
Sbjct: 686 KGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNK 745
Query: 674 XXXYHKQMIKSG 685
+ ++M K G
Sbjct: 746 AFVFWQEMQKQG 757
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 2/290 (0%)
Query: 269 RACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYES 328
R+ ++L L +AG ++ LF ++ D YN I G CG+ A+++ E
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 329 MEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEG 388
M+ P VT ++ + K+ R +A+ FE+ K ++ + + +++ F G
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDR-LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
+ A +I E+ +KG+ N +N+L+DA K+ + EA F MK P T+
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK 508
IL++ + + EMQ G+KP+ SYT +IS + +++ A F + K
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA-LFDRFKA 790
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
G P S Y A+I S A+ FE +R G+ +T LLD
Sbjct: 791 NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLD 840
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/409 (20%), Positives = 167/409 (40%), Gaps = 38/409 (9%)
Query: 254 FFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGL 313
+F+W + P + L ++ R D L + + + V+ + G
Sbjct: 84 YFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGC 143
Query: 314 LCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWS 373
+ + + + V + M K RP + ++ + S F++M G + +
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDM-MLTLFQQMQELGYEPT 202
Query: 374 EEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFV 433
+ +++ F EG V AL + EM+ + ++ ++YN +D+F K V+ A F
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 434 EMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQK 493
E++A +KP T YT +I +
Sbjct: 263 EIEANGLKPDEVT-----------------------------------YTSMIGVLCKAN 287
Query: 494 KMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETY 553
++ D A + F ++K P +++Y +I Y +G ++AY E + +G PS+ Y
Sbjct: 288 RL-DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAY 346
Query: 554 TTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGK 613
+L R+ G +K+++ M + T+NIL+D + G+ A ++ K
Sbjct: 347 NCILTCLRKMGKVDEALKVFEEMKKDAAPNLS-TYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 614 IGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
GL P V T N++++ + + + + +EM PD +T+ ++I
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 171/369 (46%), Gaps = 8/369 (2%)
Query: 294 LPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGR 353
LPS F + I A ++ +YE ++ +E I D + + ++ + R
Sbjct: 76 LPSIVDFSRLLIAIAKLN------KYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCAR 129
Query: 354 SAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYN 413
+ A KM + G + S G++V FC A+ + ++ G N ++YN
Sbjct: 130 LSL-ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYN 188
Query: 414 TLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDI 473
T++D+ C+ V A + MK ++P T+N L+ + +L++M +
Sbjct: 189 TIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRM 248
Query: 474 GLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEK 533
G+ P +++ LI YG++ ++ + A + +M + + P +Y +LI+ + G ++
Sbjct: 249 GISPDVITFSALIDVYGKEGQLLE-AKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDE 307
Query: 534 AYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVD 593
A + +G P+ TY TL++G+ +A MKI +M + V+G T+N L
Sbjct: 308 AKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQ 367
Query: 594 GFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKP 653
G+ + G++ A V+ G+HP + T+N+L++ G+ K L+++
Sbjct: 368 GYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVV 427
Query: 654 DSVTYSTMI 662
+TY+ +I
Sbjct: 428 GIITYNIII 436
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 154/345 (44%), Gaps = 2/345 (0%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
++ DA ++ M + + P V S ++ + KL + + F + G+
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNK-YEAVISLFRHLEMLGISHDLYSF 117
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
++ FC +S AL +M K G + + + +L++ FC N EA L ++
Sbjct: 118 TTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG 177
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
+P +N ++ + + Q ++L M+ +G++P +Y LI+
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG- 236
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
++A M ++GI P +++ALI Y G +A + M + + P+I TY +L+
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
+G G K+ +++S+ VT+N L++G+ K + + ++ + G+
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
TYN L Y + G+ S ++L M + + PD T++ ++
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILL 401
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 7/243 (2%)
Query: 238 VLEVLGKERLLVCCLYFFQWM--RAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLP 295
+++V GKE L+ + M R+ P++VT + L L G+ D+ + L
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNS---LINGLCIHGLLDEAKKVLNVLV 316
Query: 296 SSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSA 355
S F + YN I+G R +D K+ M +D + D T + + + G+ +
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 356 KDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
A +M GV ++ C G + +AL+ +++K I YN +
Sbjct: 377 A-AEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNII 435
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ-DIG 474
+ CK++ VE+A LF + K V P T+ +M R+ + L +MQ + G
Sbjct: 436 IKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDG 495
Query: 475 LKP 477
L P
Sbjct: 496 LMP 498
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 158/340 (46%), Gaps = 1/340 (0%)
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIV 381
A VY+ M + PD TCSI+V + G K + E + G++ + +++
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 382 KSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK 441
+ G V + M ++GV N + Y +L+ +CK +EEAE +F +K K +
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
+ +LM Y R Q + + M +IG++ LI+ Y + ++ + A
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVE-AEQ 387
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFR 561
F +M +KP H+Y L+ Y +G+ ++A + M ++ + P++ TY LL G+
Sbjct: 388 IFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYS 447
Query: 562 RAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVM 621
R G ++ +WK+M+ V +++ + L++ K G + EA + GL +
Sbjct: 448 RIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTI 507
Query: 622 TYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
T N++++ + + ++ ++L + KP TY +
Sbjct: 508 TLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQAL 547
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 186/454 (40%), Gaps = 47/454 (10%)
Query: 280 RAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHV 339
RAG D+ + L + + V YN + G G + D +++ M K + D +
Sbjct: 413 RAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEI 472
Query: 340 TCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCA------------- 386
+CS ++ + KLG +A +E + +G+ L ++ C
Sbjct: 473 SCSTLLEALFKLG-DFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Query: 387 ----------------------EGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
G + A ++ ME+KG+F +YNTL+ K H
Sbjct: 532 VNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRH 591
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
+ + L +E++A+ + PT AT+ L+ + EM + G+ N +
Sbjct: 592 LNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSK 651
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVG----IKPTSHSYTALIHAYSVSGWH-EKAYVAFE 539
+ ++ R K+ + A L ++K+ + P S + A + + +K + E
Sbjct: 652 IANSLFRLDKIDE----ACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVE 707
Query: 540 NMQ-REGIKPSIETYTTLLDGFRRAGDTQTMMKIWK-LMMSEKVEGTKVTFNILVDGFAK 597
N ++ + P+ Y + G +AG + K++ L+ S++ + T+ IL+ G A
Sbjct: 708 NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAI 767
Query: 598 QGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
G +A + E G+ P ++TYN L+ + G + +LL ++ + P+++T
Sbjct: 768 AGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAIT 827
Query: 658 YSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVD 691
Y+T+I ++MI+ G V D
Sbjct: 828 YNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSD 861
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 151/371 (40%), Gaps = 17/371 (4%)
Query: 335 RPDHVTCSIMVTVMRKLGRSAKDAWYFFE--KMNRKG-VKWSE------------EVLGA 379
RPD+ MV ++ + + Y E +N G V W E V
Sbjct: 101 RPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDM 160
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
I+K + +GLV AL + M G + + N+L+ + A ++ +M +
Sbjct: 161 ILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFE 220
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQD-IGLKPTANSYTCLISAYGRQKKMSDM 498
V P T +I+++AY R E + +GL+ +Y LI+ Y + M
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGM 280
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
L M + G+ +YT+LI Y G E+A FE ++ + + Y L+D
Sbjct: 281 TRVLRL-MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMD 339
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP 618
G+ R G + +++ M+ V N L++G+ K GQ +EA + S L P
Sbjct: 340 GYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKP 399
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYH 678
TYN L++ Y R G + +L +M + P +TY+ ++
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLW 459
Query: 679 KQMIKSGQVMD 689
K M+K G D
Sbjct: 460 KMMLKRGVNAD 470
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 156/357 (43%), Gaps = 2/357 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ + + ++G R EDA +++ + +P+ VT + ++ + K R A
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK-NRHLNHAVEL 210
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F +M G + + A+V C G A + +M K+ + N I + L+DAF K
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ EA+ L+ M +V P T+ L++ + M+ G P
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
YT LI + + K++ D F +M + G+ + +YT LI Y + G + A F M
Sbjct: 331 YTTLIHGFCKSKRVED-GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
P I TY LLDG G + + I++ M +++ VT+ I++ G K G+
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
+A D+ G+ P V+TY +++ + R G + L K+M P+ Y
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 176/408 (43%), Gaps = 37/408 (9%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
LF + S+ + + +S + RY+ ++E M+ I P TC+I++ +
Sbjct: 70 LFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCV- 128
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
L A F KM + G + +++ +C + A+ + ++ G N
Sbjct: 129 CLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNV 188
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
+ Y TL+ CK+ H+ A LF +M +P T+N L+ + LL +
Sbjct: 189 VTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRD 248
Query: 470 MQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG 529
M ++P ++T LI A+ + K+ + A + + M ++ + P +Y +LI+ + G
Sbjct: 249 MMKRRIEPNVITFTALIDAFVKVGKLME-AKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307
Query: 530 WHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFN 589
++A F M+R G P+ YTTL+ GF ++ + MKI+ M + V +T+
Sbjct: 308 LLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 590 ILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMA-- 647
+L+ G+ G+ A++V ++ P + TYN+L++ G+ K + + M
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 648 ------------------------ALNL---------KPDSVTYSTMI 662
A +L KP+ +TY+TMI
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 131/304 (43%), Gaps = 1/304 (0%)
Query: 393 ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMH 452
AL + + M + I + L+ K N + LF +M+ + P T NI+MH
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 453 AYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIK 512
QP L +M +G +P ++T L++ Y ++ D A F ++ +G K
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIA-LFDQILGMGFK 185
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI 572
P +YT LI + A F M G +P++ TY L+ G G +
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 573 WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
+ MM ++E +TF L+D F K G+ MEA+++ + ++ ++P V TY L+N
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 633 GGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDS 692
G + Q+ M P+ V Y+T+I+ +M + G V + +
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 693 YQKL 696
Y L
Sbjct: 366 YTVL 369
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 5/260 (1%)
Query: 259 RAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
R EP+++T A F +G+ +L + + + DV Y + I+GL G
Sbjct: 252 RRIEPNVITFTALIDAFVKVGKLMEAKEL---YNVMIQMSVYPDVFTYGSLINGLCMYGL 308
Query: 319 YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLG 378
++A +++ ME++ P+ V + ++ K + +D F +M++KGV +
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCK-SKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
+++ +C G A + ++M + + YN L+D C + VE+A +F M+ +
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
+ T+ I++ + + + +L + G+KP +YT +IS + R+ + +
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHE- 486
Query: 499 AADAFLKMKKVGIKPTSHSY 518
A F KMK+ G P Y
Sbjct: 487 ADSLFKKMKEDGFLPNESVY 506
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 164/387 (42%), Gaps = 31/387 (8%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
+N I+GL GR +A + M + D VT +V M K+G K A KM
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG-DTKSALNLLSKM 287
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
+K + AI+ C +G S A + SEM +KG+ N YN ++D FC
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
+A+ L +M + + P TFN L+ A + + E L EM + P +Y +
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 486 ISAYGRQKKMSD-------MAA----------DAFLKMKKV-------------GIKPTS 515
I + + + D MA+ D + + K+V G+ +
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 516 HSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKL 575
+Y LIH + A F+ M G+ P T LL GF + ++++++
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 576 MMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQ 635
+ K++ V +NI++ G K + EA D+ G+ P V TYN++++ +
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 636 HSKLPQLLKEMAALNLKPDSVTYSTMI 662
S L +M +PD+ TY+T+I
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLI 614
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 162/384 (42%), Gaps = 14/384 (3%)
Query: 279 GRAGMGD--KLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRP 336
G MGD + L + + DV IY+A I L G + DA ++ M + I P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 337 DHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALII 396
+ T + M+ GR + DA M + + A++ + EG + A +
Sbjct: 330 NVFTYNCMIDGFCSFGRWS-DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 397 QSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR 456
EM + +F + + YN+++ FCK N ++A+ +F M + P TFN ++ Y R
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCR 444
Query: 457 RMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSH 516
+ LL E+ GL +Y LI + + + A D F +M G+ P +
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL-NAAQDLFQEMISHGVCPDTI 503
Query: 517 SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM 576
+ L++ + + E+A FE +Q I Y ++ G + + W L
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD---EAWDLF 560
Query: 577 MSEKVEGTK---VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARG 633
S + G + T+N+++ GF + +A + + G P TYN L+ +
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Query: 634 GQHSKLPQLLKEMAALNLKPDSVT 657
G+ K +L+ EM + D+ T
Sbjct: 621 GEIDKSIELISEMRSNGFSGDAFT 644
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 163/355 (45%), Gaps = 6/355 (1%)
Query: 309 AISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRK 368
A+ G + + +A +++ M + + P +T + ++ + GR +A KM K
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGR-VLEAAALVNKMVGK 255
Query: 369 GVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEA 428
G+ G IV C G AL + S+ME+ + + ++Y+ ++D CK H +A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 429 EGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISA 488
+ LF EM K + P T+N ++ + + + LL +M + + P ++ LISA
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 489 YGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKP 548
++ K+ + A +M I P + +Y ++I+ + + A F+ M P
Sbjct: 376 SVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SP 430
Query: 549 SIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVI 608
+ T+ T++D + RA M++ + + + T+N L+ GF + A+D+
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 609 SEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
E G+ P +T N+L+ + + + +L + + + D+V Y+ +I+
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 168/396 (42%), Gaps = 29/396 (7%)
Query: 320 EDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGA 379
+DA ++ M + V C+ ++ V ++ R A + KM + + +
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDV-AISLYRKMEIRRIPLNIYSFNI 146
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEA----------- 428
++K FC +S +L ++ K G + + +NTL+ C + + EA
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 429 ----EGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVEN--LLAEMQDIGLKPTANSY 482
LF +M + P TFN L++ ++ +++E L+ +M GL +Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLC--LEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 483 TCLISAYGRQKKMSDM--AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
+++ KM D A + KM++ IKP Y+A+I G H A F
Sbjct: 265 GTIVNG---MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
M +GI P++ TY ++DGF G ++ + M+ ++ +TFN L+ K+G+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
EA + E + P +TYN ++ + + + + MA+ PD VT++T
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNT 437
Query: 661 MIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+I +++ + G V + +Y L
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 185/437 (42%), Gaps = 29/437 (6%)
Query: 254 FFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGL 313
FF +M P T C + + R D + L+R + + +++ +N I
Sbjct: 93 FFDYMVRSRP-FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCF 151
Query: 314 LCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWS 373
C + + + + K +PD VT + ++ G +D + +
Sbjct: 152 CDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH-----GLCLEDR-----------ISEA 195
Query: 374 EEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFV 433
+ G +V++ E A+ + +M + G+ I +NTL++ C V EA L
Sbjct: 196 LALFGYMVETGFLE-----AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250
Query: 434 EMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQK 493
+M K + T+ +++ + K NLL++M++ +KP Y+ +I +
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
Query: 494 KMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG-WHEKAYVAFENMQREGIKPSIET 552
SD A F +M + GI P +Y +I + G W + + + ++RE I P + T
Sbjct: 311 HHSD-AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLT 368
Query: 553 YTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFG 612
+ L+ + G K+ M+ + VT+N ++ GF K ++ +A+ +
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428
Query: 613 KIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXX 672
P V+T+N +++ Y R + + QLL+E++ L ++ TY+T+I+
Sbjct: 429 S----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 673 XXXXYHKQMIKSGQVMD 689
++MI G D
Sbjct: 485 AAQDLFQEMISHGVCPD 501
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 148/341 (43%), Gaps = 19/341 (5%)
Query: 253 YFFQWM--RAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAI 310
Y F M + P++ T F GR +L+ R++ + DV +NA I
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL---RDMIEREINPDVLTFNALI 373
Query: 311 SGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGV 370
S + G+ +A K+ + M I PD VT + M+ K R DA + F+ M V
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR-FDDAKHMFDLMASPDV 432
Query: 371 KWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEG 430
I+ +C V + + E+ ++G+ +N YNTL+ FC+ +++ A+
Sbjct: 433 V----TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 431 LFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENL----LAEMQDIGLKPTANSYTCLI 486
LF EM + V P T NIL++ + K+ E L + +M I L A Y +I
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCE--NEKLEEALELFEVIQMSKIDLDTVA--YNIII 544
Query: 487 SAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGI 546
+ K+ D A D F + G++P +Y +I + A V F M+ G
Sbjct: 545 HGMCKGSKV-DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 547 KPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVT 587
+P TY TL+ G +AG+ +++ M S G T
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 141/311 (45%), Gaps = 23/311 (7%)
Query: 353 RSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVY 412
+S DA FF+ M R ++ ++ F A+ + +ME + + N +
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 413 NTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQD 472
N L+ FC + + + F ++ +P TFN L+H ++ +I E L
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC--LEDRISEAL------ 196
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADA-FLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
+ +G + + A A F +M ++G+ P ++ LI+ + G
Sbjct: 197 --------------ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
+A M +G+ + TY T+++G + GDT++ + + M ++ V ++ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
+D K G + +A+ + SE + G+ P V TYN +++ + G+ S +LL++M +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 652 KPDSVTYSTMI 662
PD +T++ +I
Sbjct: 363 NPDVLTFNALI 373
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 156/363 (42%), Gaps = 25/363 (6%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
+V YN I G GR+ DA ++ M + I PD +T + +++ K G+ +A
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK-LFEAEKL 388
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
++M + + +++ FC A + M V + +NT++D +C+
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV----VTFNTIIDVYCR 444
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ V+E L E+ + + T+N L+H + ++L EM G+ P ++
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP--DT 502
Query: 482 YTCLISAYG--RQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
TC I YG +K+ + A + F ++ I + +Y +IH ++A+ F
Sbjct: 503 ITCNILLYGFCENEKLEE-ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
++ G++P ++TY ++ GF ++ M E T+N L+ G K G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNM------------LMNAYAR---GGQHSKLPQLLK 644
+ ++ ++ISE G T M ++ Y R G+ S +P+ +
Sbjct: 622 EIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLRPKINGETSSIPRYVV 681
Query: 645 EMA 647
E+A
Sbjct: 682 ELA 684
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
LF+ + S D N + G + E+A +++E ++ I D V +I++ M
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
K G +AW F + GV+ + ++ FC + +S A ++ +M+ G +
Sbjct: 549 K-GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
YNTL+ K+ ++++ L EM++ A T + R +I+EN
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENY--- 664
Query: 470 MQDIGLKPTANSYTCLISAY 489
L+P N T I Y
Sbjct: 665 -----LRPKINGETSSIPRY 679
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 182/416 (43%), Gaps = 25/416 (6%)
Query: 266 VTPRACTVLFPLLGRAGMG--DKLMVLFRNLPSSK-KFRDVHIYNAAISGLLCCGRYEDA 322
++P T L G+ +G D +VL +++ S + + + +SGL GR ++A
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 323 WKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVK 382
++ M+ D + PD V SI++ + KLG+ W +++M K + + GA++
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW-LYDEMCDKRILPNSRTHGALLL 441
Query: 383 SFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKP 442
C +G++ A + + G + ++YN ++D + KS +EEA LF + + P
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY---GRQKKMSDMA 499
+ ATFN L++ Y + +L ++ GL P+ SYT L+ AY G K + ++
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGW-------------HEKAYVAFENMQREGI 546
+ MK GI PT+ +Y+ + GW EK +M+ EGI
Sbjct: 562 RE----MKAEGIPPTNVTYSVIFKGL-CRGWKHENCNHVLRERIFEKCKQGLRDMESEGI 616
Query: 547 KPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARD 606
P TY T++ R ++M S ++ + T+NIL+D G +A
Sbjct: 617 PPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADS 676
Query: 607 VISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
I + + + Y L+ A+ G +L ++ YS +I
Sbjct: 677 FIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 168/373 (45%), Gaps = 15/373 (4%)
Query: 303 VHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFF 362
V+ +N I+GL G +A ++ M K + PD VT +I+ LG + AW
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG-AWEVI 315
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIV-YNTLMDAFCK 421
M KG+ ++ C G + L++ +M +G N+I+ + ++ CK
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 375
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ ++EA LF +MKA + P ++I++H + + + L EM D + P + +
Sbjct: 376 TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
+ L+ QK M A + G Y +I Y+ SG E+A F+ +
Sbjct: 436 HGALLLGLC-QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
GI PS+ T+ +L+ G+ + + KI ++ + + V++ L+D +A G
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQH------------SKLPQLLKEMAAL 649
++ E G+ PT +TY+++ RG +H K Q L++M +
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614
Query: 650 NLKPDSVTYSTMI 662
+ PD +TY+T+I
Sbjct: 615 GIPPDQITYNTII 627
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 149/342 (43%), Gaps = 7/342 (2%)
Query: 323 WKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVK 382
W VY+ ++ N +H +++ + R+ + +DA F K + S +I+
Sbjct: 176 WDVYKEIKDKN---EHTYSTVVDGLCRQ--QKLEDAVLFLRTSEWKDIGPSVVSFNSIMS 230
Query: 383 SFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKP 442
+C G V A + K G+ + +N L++ C + EA L +M V+P
Sbjct: 231 GYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEP 290
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADA 502
+ T+NIL + ++ +M D GL P +YT L+ + + DM
Sbjct: 291 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI-DMGLVL 349
Query: 503 FLKMKKVGIKPTSH-SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFR 561
M G + S + ++ +G ++A F M+ +G+ P + Y+ ++ G
Sbjct: 350 LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 562 RAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVM 621
+ G + ++ M +++ T L+ G ++G +EAR ++ G ++
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469
Query: 622 TYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
YN++++ YA+ G + +L K + + P T++++IY
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 132/268 (49%), Gaps = 14/268 (5%)
Query: 394 LIIQSEMEKKGVF----SNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
+I++ ++++G F S +V++ L+ + V+++ + +MK +N+ + ++N
Sbjct: 105 VILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNS 164
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK- 508
+++ + + + ++ E++D ++Y+ ++ RQ+K+ D A FL+ +
Sbjct: 165 VLYHFR---ETDKMWDVYKEIKD----KNEHTYSTVVDGLCRQQKLED--AVLFLRTSEW 215
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
I P+ S+ +++ Y G+ + A F + + G+ PS+ ++ L++G G
Sbjct: 216 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 275
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMN 628
+++ M VE VT+NIL GF G A +VI + GL P V+TY +L+
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 629 AYARGGQHSKLPQLLKEMAALNLKPDSV 656
+ G LLK+M + + +S+
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 62/248 (25%)
Query: 316 CGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEE 375
CG + ++ M+ + I P +VT S+ + + L R K E N
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSV---IFKGLCRGWKH-----ENCN--------H 594
Query: 376 VLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM 435
VL + C +GL +ME +G+ + I YNT++ C+ H+ A M
Sbjct: 595 VLRERIFEKCKQGL--------RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM 646
Query: 436 KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
K++N+ ++AT+NIL+ + + YG +K
Sbjct: 647 KSRNLDASSATYNILIDS--------------------------------LCVYGYIRK- 673
Query: 496 SDMAADAFL-KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYT 554
AD+F+ +++ + + +YT LI A+ V G E A F + G SI Y+
Sbjct: 674 ----ADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 729
Query: 555 TLLDGFRR 562
+++ R
Sbjct: 730 AVINRLCR 737
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 188/413 (45%), Gaps = 43/413 (10%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESM-EKDNIRPDHVTCSI 343
D ++ L+ ++P DV N+ +S L+ R DA KVY+ M ++ + ++ TC +
Sbjct: 158 DYVVELYDSVP------DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCIL 211
Query: 344 M--------VTVMRKL--GRSAK-----------------------DAWYFFEKMNRKGV 370
+ V V RKL GR K +A+ F+++ KG
Sbjct: 212 VKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGF 271
Query: 371 KWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH-VEEAE 429
+ E G ++ FC EG + + SE++++G+ + N ++DA + + V+ AE
Sbjct: 272 MPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAE 331
Query: 430 GLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY 489
+ + A + KP AT+NIL++ + + ++ L E GL P SY LI AY
Sbjct: 332 SIGW-IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAY 390
Query: 490 GRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPS 549
+ K+ D+A+ L+M + G KP +Y LIH VSG + A + G+ P
Sbjct: 391 CKSKEY-DIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 550 IETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVIS 609
Y L+ G + G ++ M+ + + L+DGF + G + EAR V S
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Query: 610 EFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ G+ V+ +N ++ + R G + + M +L PD TYST+I
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 161/334 (48%), Gaps = 7/334 (2%)
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCA--EGL 389
++ +PD T +I++ + K G+ + A F ++ ++KG+ + +++++C E
Sbjct: 339 NDCKPDVATYNILINRLCKEGKK-EVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
++ L++Q M ++G + + Y L+ S H+++A + V++ + V P AA +N+
Sbjct: 398 IASKLLLQ--MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
LM + + + L +EM D + P A Y LI + R D A F +
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDF-DEARKVFSLSVEK 514
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
G+K + A+I + SG ++A M E + P TY+T++DG+ + D T
Sbjct: 515 GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATA 574
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
+KI++ M K + VT+ L++GF QG + A + E L P V+TY L+ +
Sbjct: 575 IKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS 634
Query: 630 YARGGQHSKLPQLLKEMAALN-LKPDSVTYSTMI 662
A+ + E+ N P+ VT++ ++
Sbjct: 635 LAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 130/334 (38%), Gaps = 16/334 (4%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D IYN +SGL GR+ A ++ M NI PD + ++ + G +A
Sbjct: 449 DAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSG-DFDEARKV 507
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F KGVK A++K FC G++ AL + M ++ + + Y+T++D + K
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ A +F M+ KP T+ L++ + + K+ E EMQ L P +
Sbjct: 568 QQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVT 627
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAY--------------SV 527
YT LI + ++ + A + M P ++ L+ + S
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSN 687
Query: 528 SGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVT 587
G F M+ +G Y + L G +T M+ + V+
Sbjct: 688 HGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVS 747
Query: 588 FNILVDGFAKQGQYMEARDV-ISEFGKIGLHPTV 620
F ++ GF G + R++ G+ GL V
Sbjct: 748 FAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAV 781
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 143/337 (42%), Gaps = 3/337 (0%)
Query: 328 SMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAE 387
S +KD + CS + ++ + R + + + VK + E L ++ ++
Sbjct: 89 SEKKDEFFSNGFACSSFLKLLARY-RIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAES 147
Query: 388 GLVSRAL-IIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAAT 446
G +S+A+ I +E + I N+L+ KS + +A ++ EM + +
Sbjct: 148 GSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYS 207
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
IL+ + ++ L+ G P Y +I Y + + + A F ++
Sbjct: 208 TCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIEN-AYLVFKEL 266
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
K G PT ++ +I+ + G + ++ G++ S+ ++D R G
Sbjct: 267 KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYK 326
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
+ +++ + T+NIL++ K+G+ A + E K GL P ++Y L
Sbjct: 327 VDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPL 386
Query: 627 MNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
+ AY + ++ +LL +MA KPD VTY +I+
Sbjct: 387 IQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIH 423
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 6/268 (2%)
Query: 398 SEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRR 457
S +K FSN ++ + + E E + ++ +NVK T + ++HAY+
Sbjct: 88 SSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAES 147
Query: 458 MQ-PKIVE--NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPT 514
K VE + + E+ D P + L+S + +++ D A + +M G
Sbjct: 148 GSLSKAVEIYDYVVELYDS--VPDVIACNSLLSLLVKSRRLGD-ARKVYDEMCDRGDSVD 204
Query: 515 SHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK 574
++S L+ G E E +G P+I Y T++ G+ + GD + ++K
Sbjct: 205 NYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFK 264
Query: 575 LMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGG 634
+ + T TF +++GF K+G ++ + ++SE + GL +V N +++A R G
Sbjct: 265 ELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHG 324
Query: 635 QHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ + + A + KPD TY+ +I
Sbjct: 325 YKVDPAESIGWIIANDCKPDVATYNILI 352
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 132 bits (333), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 165/387 (42%), Gaps = 31/387 (8%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
+N I+GL GR +A + M + D VT +V M K+G + K A KM
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT-KSALNLLSKM 287
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
+K + AI+ C +G S A + SEM +KG+ N YN ++D FC
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
+A+ L +M + + P TFN L+ A + + E L EM + P +Y +
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 486 ISAYGRQKKMSD-------MAA----------DAFLKMKKV-------------GIKPTS 515
I + + + D MA+ D + + K+V G+ +
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 516 HSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKL 575
+Y LIH + A F+ M G+ P T LL GF + ++++++
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 576 MMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQ 635
+ K++ V +NI++ G K + EA D+ G+ P V TYN++++ +
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 636 HSKLPQLLKEMAALNLKPDSVTYSTMI 662
S L +M +PD+ TY+T+I
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLI 614
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 154/359 (42%), Gaps = 12/359 (3%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV IY+A I L G + DA ++ M + I P+ T + M+ GR + DA
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS-DAQRL 353
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
M + + A++ + EG + A + EM + +F + + YN+++ FCK
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
N ++A+ +F M + P TFN ++ Y R + LL E+ GL +
Sbjct: 414 HNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LI + + + A D F +M G+ P + + L++ + + E+A FE +
Sbjct: 470 YNTLIHGFCEVDNL-NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK---VTFNILVDGFAKQ 598
Q I Y ++ G + + W L S + G + T+N+++ GF +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVD---EAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 599 GQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
+A + + G P TYN L+ + G+ K +L+ EM + D+ T
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 159/345 (46%), Gaps = 6/345 (1%)
Query: 319 YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLG 378
+ +A +++ M + + P +T + ++ + GR +A KM KG+ G
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGR-VLEAAALVNKMVGKGLHIDVVTYG 265
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
IV C G AL + S+ME+ + + ++Y+ ++D CK H +A+ LF EM K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
+ P T+N ++ + + + LL +M + + P ++ LISA ++ K+ +
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE- 384
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
A +M I P + +Y ++I+ + + A F+ M P + T+ T++D
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIID 440
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP 618
+ RA M++ + + + T+N L+ GF + A+D+ E G+ P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
+T N+L+ + + + +L + + + D+V Y+ +I+
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 168/396 (42%), Gaps = 29/396 (7%)
Query: 320 EDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGA 379
+DA ++ M + V C+ ++ V ++ R A + KM + + +
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDV-AISLYRKMEIRRIPLNIYSFNI 146
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEA----------- 428
++K FC +S +L ++ K G + + +NTL+ C + + EA
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 429 ----EGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVEN--LLAEMQDIGLKPTANSY 482
LF +M + P TFN L++ ++ +++E L+ +M GL +Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLC--LEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 483 TCLISAYGRQKKMSDM--AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
+++ KM D A + KM++ IKP Y+A+I G H A F
Sbjct: 265 GTIVNG---MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
M +GI P++ TY ++DGF G ++ + M+ ++ +TFN L+ K+G+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
EA + E + P +TYN ++ + + + + MA+ PD VT++T
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNT 437
Query: 661 MIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+I +++ + G V + +Y L
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 185/437 (42%), Gaps = 29/437 (6%)
Query: 254 FFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGL 313
FF +M P T C + + R D + L+R + + +++ +N I
Sbjct: 93 FFDYMVRSRP-FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCF 151
Query: 314 LCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWS 373
C + + + + K +PD VT + ++ G +D + +
Sbjct: 152 CDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH-----GLCLEDR-----------ISEA 195
Query: 374 EEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFV 433
+ G +V++ E A+ + +M + G+ I +NTL++ C V EA L
Sbjct: 196 LALFGYMVETGFLE-----AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250
Query: 434 EMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQK 493
+M K + T+ +++ + K NLL++M++ +KP Y+ +I +
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
Query: 494 KMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG-WHEKAYVAFENMQREGIKPSIET 552
SD A F +M + GI P +Y +I + G W + + + ++RE I P + T
Sbjct: 311 HHSD-AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLT 368
Query: 553 YTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFG 612
+ L+ + G K+ M+ + VT+N ++ GF K ++ +A+ +
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428
Query: 613 KIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXX 672
P V+T+N +++ Y R + + QLL+E++ L ++ TY+T+I+
Sbjct: 429 S----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 673 XXXXYHKQMIKSGQVMD 689
++MI G D
Sbjct: 485 AAQDLFQEMISHGVCPD 501
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 151/347 (43%), Gaps = 19/347 (5%)
Query: 253 YFFQWM--RAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAI 310
Y F M + P++ T F GR +L+ R++ + DV +NA I
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL---RDMIEREINPDVLTFNALI 373
Query: 311 SGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGV 370
S + G+ +A K+ + M I PD VT + M+ K R DA + F+ M V
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR-FDDAKHMFDLMASPDV 432
Query: 371 KWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEG 430
I+ +C V + + E+ ++G+ +N YNTL+ FC+ +++ A+
Sbjct: 433 V----TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 431 LFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENL----LAEMQDIGLKPTANSYTCLI 486
LF EM + V P T NIL++ + K+ E L + +M I L A Y +I
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCE--NEKLEEALELFEVIQMSKIDLDTVA--YNIII 544
Query: 487 SAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGI 546
+ K+ D A D F + G++P +Y +I + A V F M+ G
Sbjct: 545 HGMCKGSKV-DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 547 KPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVD 593
+P TY TL+ G +AG+ +++ M S G T ++ D
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 141/311 (45%), Gaps = 23/311 (7%)
Query: 353 RSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVY 412
+S DA FF+ M R ++ ++ F A+ + +ME + + N +
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 413 NTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQD 472
N L+ FC + + + F ++ +P TFN L+H ++ +I E L
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC--LEDRISEAL------ 196
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADA-FLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
+ +G + + A A F +M ++G+ P ++ LI+ + G
Sbjct: 197 --------------ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
+A M +G+ + TY T+++G + GDT++ + + M ++ V ++ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
+D K G + +A+ + SE + G+ P V TYN +++ + G+ S +LL++M +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 652 KPDSVTYSTMI 662
PD +T++ +I
Sbjct: 363 NPDVLTFNALI 373
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 147/344 (42%), Gaps = 10/344 (2%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
+V YN I G GR+ DA ++ M + I PD +T + +++ K G+ +A
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK-LFEAEKL 388
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
++M + + +++ FC A + M V + +NT++D +C+
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV----VTFNTIIDVYCR 444
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ V+E L E+ + + T+N L+H + ++L EM G+ P ++
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP--DT 502
Query: 482 YTCLISAYG--RQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
TC I YG +K+ + A + F ++ I + +Y +IH ++A+ F
Sbjct: 503 ITCNILLYGFCENEKLEE-ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
++ G++P ++TY ++ GF ++ M E T+N L+ G K G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLL 643
+ ++ ++ISE G T M+ + G +L
Sbjct: 622 EIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDML 665
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 142/311 (45%), Gaps = 1/311 (0%)
Query: 352 GRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIV 411
G DA Y F++M G K + + I+ C V AL + + MEK G+ + +
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
YN+L+ C S +A + M + + P TFN L+ A + + E EM
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
L P +Y+ LI ++ D A + F M G P +Y+ LI+ Y S
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRL-DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
E F M + G+ + TYT L+ G+ RAG +I++ M+ V +T+N+L
Sbjct: 343 EHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
+ G G+ +A ++++ K G+ ++TYN+++ + G+ + + + L
Sbjct: 403 LHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGL 462
Query: 652 KPDSVTYSTMI 662
PD TY+TM+
Sbjct: 463 MPDIWTYTTMM 473
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 165/398 (41%), Gaps = 46/398 (11%)
Query: 260 AQEPSLVTPRACTVLFPLLGRAGMGDKL---MVLFRNLPSSKKFRDVHIYNAAISGLLCC 316
EPS+VT LL GD++ + +F + +V IYN I GL
Sbjct: 146 GHEPSIVT------FGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEV 376
+ ++A + MEKD I PD VT
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVT------------------------------------ 223
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
+++ C+ G S A + S M K+ ++ + +N L+DA K V EAE + EM
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMS 496
+++ P T+++L++ + E + M G P +Y+ LI+ Y + KK+
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV- 342
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
+ F +M + G+ + +YT LI Y +G A F M G+ P+I TY L
Sbjct: 343 EHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
L G G + + I M ++ VT+NI++ G K G+ +A D+ GL
Sbjct: 403 LHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGL 462
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
P + TY +M + G + L ++M + P+
Sbjct: 463 MPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 146/335 (43%), Gaps = 1/335 (0%)
Query: 360 YFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAF 419
Y +E+M G+ + ++ FC +S AL +M K G + + + +L++ F
Sbjct: 102 YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGF 161
Query: 420 CKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTA 479
C+ + V +A +F +M KP +N ++ + Q +LL M+ G+ P
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 480 NSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
+Y LIS + SD A M K I P ++ ALI A G +A +E
Sbjct: 222 VTYNSLISGLCSSGRWSD-ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
M R + P I TY+ L+ G +++ M+S+ VT++IL++G+ K
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
+ + E + G+ +TY +L+ Y R G+ + ++ + M + P+ +TY+
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400
Query: 660 TMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQ 694
+++ M K+G D+ +Y
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 137/291 (47%), Gaps = 1/291 (0%)
Query: 406 FSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVEN 465
+SN Y ++ + ++++ LF M P+ A F+ L+ A S+ + +V
Sbjct: 43 YSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIY 102
Query: 466 LLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAY 525
L +MQ +G+ + L++ + R ++S +A KM K+G +P+ ++ +L++ +
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLS-LALSFLGKMIKLGHEPSIVTFGSLLNGF 161
Query: 526 SVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK 585
A F+ M G KP++ Y T++DG ++ + + M + +
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 586 VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 645
VT+N L+ G G++ +A ++S K ++P V T+N L++A + G+ S+ + +E
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 646 MAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
M +L PD VTYS +IY M+ G DV +Y L
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 176/380 (46%), Gaps = 5/380 (1%)
Query: 313 LLCC--GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGV 370
LL C G+ + A + ME+ I P+ V + M+ ++ ++ A F +M KG+
Sbjct: 457 LLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRM-KNMDLARSIFSEMLEKGL 515
Query: 371 KWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEG 430
+ + ++ F A + ++M +N ++YNT+++ CK +A+
Sbjct: 516 EPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKE 575
Query: 431 LFVEM-KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY 489
+ + K K + ++N ++ + + EM + G P ++T LI+ +
Sbjct: 576 MLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGF 635
Query: 490 GRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPS 549
+ +M D+A + +MK + +K +Y ALI + + AY F + G+ P+
Sbjct: 636 CKSNRM-DLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPN 694
Query: 550 IETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVIS 609
+ Y +L+ GFR G + ++K M+++ + T+ ++DG K G A D+ S
Sbjct: 695 VSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYS 754
Query: 610 EFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXX 669
E +G+ P + + +L+N ++ GQ K ++L+EM ++ P+ + YST+I
Sbjct: 755 ELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREG 814
Query: 670 XXXXXXXYHKQMIKSGQVMD 689
H +M++ G V D
Sbjct: 815 NLNEAFRLHDEMLEKGIVHD 834
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 179/393 (45%), Gaps = 3/393 (0%)
Query: 271 CTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESME 330
C +F L + G D + + +V YN + + A ++ M
Sbjct: 452 CNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEML 511
Query: 331 KDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLV 390
+ + P++ T SI++ K + ++AW +MN + +E + I+ C G
Sbjct: 512 EKGLEPNNFTYSILIDGFFK-NKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQT 570
Query: 391 SRAL-IIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
S+A ++Q+ +++K + YN+++D F K + A + EM P TF
Sbjct: 571 SKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTS 630
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
L++ + + + + + EM+ + LK +Y LI + ++ M A F ++ ++
Sbjct: 631 LINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMK-TAYTLFSELPEL 689
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
G+ P Y +LI + G + A ++ M +GI + TYTT++DG + G+
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
++ ++ + ++ +LV+G +K+GQ+++A ++ E K + P V+ Y+ ++
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAG 809
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ R G ++ +L EM + D ++ ++
Sbjct: 810 HHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 168/379 (44%), Gaps = 38/379 (10%)
Query: 320 EDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGA 379
E+A K++ + PD + S+ V K E + GV S+E +
Sbjct: 256 EEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTS 315
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
++ +F EG + A+ + EM G+ + I +L++ +CK N + +A LF M+ +
Sbjct: 316 VIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEG 375
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPT--------------------- 478
+ P F++++ + + M+ + M+ + + P+
Sbjct: 376 LAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAAL 435
Query: 479 -----------ANSYTC--LISAYGRQKKMSDMAADAFLK-MKKVGIKPTSHSYTALIHA 524
A+ + C + + +Q K+ AA +FLK M++ GI+P Y ++ A
Sbjct: 436 EIFNDSFESWIAHGFMCNKIFLLFCKQGKVD--AATSFLKMMEQKGIEPNVVFYNNMMLA 493
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
+ + A F M +G++P+ TY+ L+DGF + D Q + M + E
Sbjct: 494 HCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEAN 553
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP-TVMTYNMLMNAYARGGQHSKLPQLL 643
+V +N +++G K GQ +A++++ K + + +YN +++ + + G +
Sbjct: 554 EVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETY 613
Query: 644 KEMAALNLKPDSVTYSTMI 662
+EM+ P+ VT++++I
Sbjct: 614 REMSENGKSPNVVTFTSLI 632
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 134/323 (41%), Gaps = 34/323 (10%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
Y+ I G ++AW V M N + V + ++ + K+G+++K +
Sbjct: 522 YSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
K S +I+ F G A+ EM + G N + + +L++ FCKSN +
Sbjct: 582 KEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRM 641
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
+ A + EMK+ +K + L+ + ++ K L +E+ ++GL P + Y L
Sbjct: 642 DLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSL 701
Query: 486 ISAYGRQKKMS----------------------------------DMAADAFLKMKKVGI 511
IS + KM ++A+D + ++ +GI
Sbjct: 702 ISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGI 761
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMK 571
P + L++ S G KA E M+++ + P++ Y+T++ G R G+ +
Sbjct: 762 VPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFR 821
Query: 572 IWKLMMSEKVEGTKVTFNILVDG 594
+ M+ + + FN+LV G
Sbjct: 822 LHDEMLEKGIVHDDTVFNLLVSG 844
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
Query: 413 NTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQD 472
N ++ + +SN ++EA+ ++ +M V T +LM A R +P+ + +
Sbjct: 208 NNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMS 267
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMK-KVGIKPTSHSYTALIHAYSVSGWH 531
G +P ++ + A + + MA D +M+ K+G+ + +YT++I A+ G
Sbjct: 268 RGAEPDGLLFSLAVQAACKTPDLV-MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNM 326
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
E+A + M GI S+ T+L++G+ + + + ++ M E + KV F+++
Sbjct: 327 EEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVM 386
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHP-TVMTYNML 626
V+ F K + +A + + + P +V+ + M+
Sbjct: 387 VEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMI 422
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 89/237 (37%), Gaps = 37/237 (15%)
Query: 462 IVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAL 521
+V NL+ + G + T ++ L++AY R K+M D A D F M + P +
Sbjct: 152 MVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRM-DYAVDCFGLMVDRKVVPFVPYVNNV 210
Query: 522 IHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKV 581
+ + S ++A + M G+ T L+ R + +KI++ +MS
Sbjct: 211 LSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGA 270
Query: 582 EGTKVTFNILVD------------------------------------GFAKQGQYMEAR 605
E + F++ V F K+G EA
Sbjct: 271 EPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAV 330
Query: 606 DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
V+ E G+ +V+ L+N Y +G + K L M L PD V +S M+
Sbjct: 331 RVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMV 387
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 182/416 (43%), Gaps = 25/416 (6%)
Query: 266 VTPRACTVLFPLLGRAGMG--DKLMVLFRNLPSSK-KFRDVHIYNAAISGLLCCGRYEDA 322
++P T L G+ +G D +VL +++ S + + + +SGL GR ++A
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 323 WKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVK 382
++ M+ D + PD V SI++ + KLG+ W +++M K + + GA++
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW-LYDEMCDKRILPNSRTHGALLL 441
Query: 383 SFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKP 442
C +G++ A + + G + ++YN ++D + KS +EEA LF + + P
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY---GRQKKMSDMA 499
+ ATFN L++ Y + +L ++ GL P+ SYT L+ AY G K + ++
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGW-------------HEKAYVAFENMQREGI 546
+ MK GI PT+ +Y+ + GW EK +M+ EGI
Sbjct: 562 RE----MKAEGIPPTNVTYSVIFKGL-CRGWKHENCNHVLRERIFEKCKQGLRDMESEGI 616
Query: 547 KPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARD 606
P TY T++ R ++M S ++ + T+NIL+D G +A
Sbjct: 617 PPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADS 676
Query: 607 VISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
I + + + Y L+ A+ G +L ++ YS +I
Sbjct: 677 FIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 168/373 (45%), Gaps = 15/373 (4%)
Query: 303 VHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFF 362
V+ +N I+GL G +A ++ M K + PD VT +I+ LG + AW
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS-GAWEVI 315
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIV-YNTLMDAFCK 421
M KG+ ++ C G + L++ +M +G N+I+ + ++ CK
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 375
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ ++EA LF +MKA + P ++I++H + + + L EM D + P + +
Sbjct: 376 TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
+ L+ QK M A + G Y +I Y+ SG E+A F+ +
Sbjct: 436 HGALLLGLC-QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
GI PS+ T+ +L+ G+ + + KI ++ + + V++ L+D +A G
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQH------------SKLPQLLKEMAAL 649
++ E G+ PT +TY+++ RG +H K Q L++M +
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614
Query: 650 NLKPDSVTYSTMI 662
+ PD +TY+T+I
Sbjct: 615 GIPPDQITYNTII 627
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 149/342 (43%), Gaps = 7/342 (2%)
Query: 323 WKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVK 382
W VY+ ++ N +H +++ + R+ + +DA F K + S +I+
Sbjct: 176 WDVYKEIKDKN---EHTYSTVVDGLCRQ--QKLEDAVLFLRTSEWKDIGPSVVSFNSIMS 230
Query: 383 SFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKP 442
+C G V A + K G+ + +N L++ C + EA L +M V+P
Sbjct: 231 GYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEP 290
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADA 502
+ T+NIL + ++ +M D GL P +YT L+ + + DM
Sbjct: 291 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI-DMGLVL 349
Query: 503 FLKMKKVGIKPTSH-SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFR 561
M G + S + ++ +G ++A F M+ +G+ P + Y+ ++ G
Sbjct: 350 LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 562 RAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVM 621
+ G + ++ M +++ T L+ G ++G +EAR ++ G ++
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469
Query: 622 TYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
YN++++ YA+ G + +L K + + P T++++IY
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 132/268 (49%), Gaps = 14/268 (5%)
Query: 394 LIIQSEMEKKGVF----SNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
+I++ ++++G F S +V++ L+ + V+++ + +MK +N+ + ++N
Sbjct: 105 VILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNS 164
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK- 508
+++ + + + ++ E++D ++Y+ ++ RQ+K+ D A FL+ +
Sbjct: 165 VLYHFR---ETDKMWDVYKEIKD----KNEHTYSTVVDGLCRQQKLED--AVLFLRTSEW 215
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
I P+ S+ +++ Y G+ + A F + + G+ PS+ ++ L++G G
Sbjct: 216 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 275
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMN 628
+++ M VE VT+NIL GF G A +VI + GL P V+TY +L+
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 629 AYARGGQHSKLPQLLKEMAALNLKPDSV 656
+ G LLK+M + + +S+
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 62/248 (25%)
Query: 316 CGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEE 375
CG + ++ M+ + I P +VT S+ + + L R K E N
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSV---IFKGLCRGWKH-----ENCN--------H 594
Query: 376 VLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM 435
VL + C +GL +ME +G+ + I YNT++ C+ H+ A M
Sbjct: 595 VLRERIFEKCKQGL--------RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM 646
Query: 436 KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
K++N+ ++AT+NIL+ + + YG +K
Sbjct: 647 KSRNLDASSATYNILIDS--------------------------------LCVYGYIRK- 673
Query: 496 SDMAADAFL-KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYT 554
AD+F+ +++ + + +YT LI A+ V G E A F + G SI Y+
Sbjct: 674 ----ADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 729
Query: 555 TLLDGFRR 562
+++ R
Sbjct: 730 AVINRLCR 737
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 157/352 (44%), Gaps = 5/352 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV ++ I+G R DA + ME+ RPD V + ++ K+G DA
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL-VNDAVEL 196
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F++M R GV+ ++V C G S A + +M + + N I + ++D F K
Sbjct: 197 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 256
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
EA L+ EM + V P T+N L++ + + +L M G P +
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LI+ + + K++ D F +M + G+ + +Y +I Y +G + A F M
Sbjct: 317 YNTLINGFCKSKRV-DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
+P+I TY+ LL G + + +++ M ++E T+NI++ G K G
Sbjct: 376 DS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKP 653
+A D+ GL P V++Y +++ + R Q K L ++M L P
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 164/378 (43%), Gaps = 5/378 (1%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D ++ LF ++ D++ YN I+ L C R+ A V M K PD VT S +
Sbjct: 86 DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 145
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ + G DA KM G + + I+ C GLV+ A+ + ME+ G
Sbjct: 146 INGFCQ-GNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 204
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
V ++A+ YN+L+ C S +A L +M +++ P TF ++ + + +
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
L EM + P +Y LI+ ++ D A M G P +Y LI+
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRV-DEAKQMLDLMVTKGCLPDVVTYNTLING 323
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
+ S ++ F M + G+ TY T++ G+ +AG +I+ M S
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP---N 380
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
T++IL+ G + +A + K + + TYN++++ + G L +
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Query: 645 EMAALNLKPDSVTYSTMI 662
++ LKPD V+Y+TMI
Sbjct: 441 SLSCKGLKPDVVSYTTMI 458
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 137/283 (48%), Gaps = 5/283 (1%)
Query: 280 RAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHV 339
+ G+ + + LF + D YN+ ++GL C GR+ DA ++ M +I P+ +
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 340 TCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSE 399
T + ++ V K G+ + +A +E+M R+ V +++ C G V A +
Sbjct: 246 TFTAVIDVFVKEGKFS-EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 400 MEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQ 459
M KG + + YNTL++ FCKS V+E LF EM + + T+N ++ Y + +
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 460 PKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYT 519
P + + + M +P +Y+ L+ ++ + A F M+K I+ +Y
Sbjct: 365 PDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRV-EKALVLFENMQKSEIELDITTYN 420
Query: 520 ALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR 562
+IH G E A+ F ++ +G+KP + +YTT++ GF R
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 131/285 (45%), Gaps = 1/285 (0%)
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
++ ++ KS + + LF M+ + ++NI+++ R + I +++ +M
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
G +P + + LI+ + + ++ D A D KM+++G +P Y +I G
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
A F+ M+R+G++ TY +L+ G +G ++ + M+ + +TF +
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
+D F K+G++ EA + E + + P V TYN L+N G+ + Q+L M
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 652 KPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
PD VTY+T+I ++M + G V D +Y +
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 117/256 (45%), Gaps = 8/256 (3%)
Query: 258 MRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCG 317
MR P+++T A +F + G + M L+ + DV YN+ I+GL G
Sbjct: 237 MRDIVPNVITFTAVIDVFV---KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
R ++A ++ + M PD VT + ++ K R + F +M ++G+
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR-VDEGTKLFREMAQRGLVGDTITY 352
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
I++ + G A I S M+ + N Y+ L+ C + VE+A LF M+
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
++ T+NI++H + + +L + GLKP SYT +IS + R+++ D
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW-D 468
Query: 498 MAADAFLKMKKVGIKP 513
+ + KM++ G+ P
Sbjct: 469 KSDLLYRKMQEDGLLP 484
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 78/162 (48%)
Query: 501 DAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
D F KM + P+ ++ ++ + S ++ F +M+ GI + +Y +++
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTV 620
R + + MM E VT + L++GF + + +A D++S+ ++G P V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 621 MTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ YN +++ + G + +L M ++ D+VTY++++
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 140/284 (49%), Gaps = 1/284 (0%)
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
A++KSF G+V L + +M++ G+ YN LM+ + V+ AE +F M++
Sbjct: 192 ALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESG 251
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
+KP T+N ++ Y + Q + L +M+ G + +Y +I A
Sbjct: 252 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 311
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
A + +M + GI+ H+++ +I G + Y FENM R+G KP++ YT L+D
Sbjct: 312 VA-LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP 618
G+ ++G + +++ M+ E + VT++++V+G K G+ EA D GL
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAI 430
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
M Y+ L++ + G+ + +L +EM+ DS Y+ +I
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALI 474
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 176/405 (43%), Gaps = 37/405 (9%)
Query: 266 VTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKV 325
+T A L G+ GM ++L+ ++R + + ++ YN ++GL+ + A +V
Sbjct: 185 MTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERV 244
Query: 326 YESMEKDNIRPDHVTCSIMVTVMRKLGRSAK------------------------DAWY- 360
+E ME I+PD VT + M+ K G++ K A Y
Sbjct: 245 FEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYA 304
Query: 361 ---------FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIV 411
+++M+ KG++ ++ C EG ++ + M +KG N +
Sbjct: 305 DSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 364
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
Y L+D + KS VE+A L M + KP T++++++ + + + + +
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR 424
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
GL + Y+ LI G+ ++ D A F +M + G S+ Y ALI A++
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRV-DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKV 483
Query: 532 EKAYVAFENM-QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI 590
++A F+ M + EG ++ TYT LL G + + +K+W +M+ + + T F
Sbjct: 484 DEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRA 543
Query: 591 LVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQ 635
L G G+ A ++ E +G+ +M+ N + G+
Sbjct: 544 LSTGLCLSGKVARACKILDELAPMGVILDAACEDMI-NTLCKAGR 587
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 180/397 (45%), Gaps = 5/397 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVT-CSIMVTVMRKLGRSAKDAWY 360
+V + N +S L G+ ++A ++ ME I P+ V+ ++M+ R+ ++ A
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ--KNMDLARI 499
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
F + KG+K + ++ AL + + M + N +VY T+++ C
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559
Query: 421 KSNHVEEAEGLFVEM-KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTA 479
K +A L M + K + + ++N ++ + + + EM G+ P
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619
Query: 480 NSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
+YT L++ + +M D A + +MK G+K +Y ALI + E A F
Sbjct: 620 ITYTSLMNGLCKNNRM-DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFS 678
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
+ EG+ PS Y +L+ GFR G+ + ++K M+ + + T+ L+DG K G
Sbjct: 679 ELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDG 738
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
+ A ++ +E +GL P + Y +++N ++ GQ K+ ++ +EM N+ P+ + Y+
Sbjct: 739 NLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN 798
Query: 660 TMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+I H +M+ G + D ++ L
Sbjct: 799 AVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 203/460 (44%), Gaps = 17/460 (3%)
Query: 218 TLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQ-WMRAQ-------------EP 263
L E + GE E ++ +EVLG + Q W++ Q E
Sbjct: 379 VLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFET 438
Query: 264 SLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAW 323
L C + L + G D+ L + S +V YN + G + A
Sbjct: 439 GLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLAR 498
Query: 324 KVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKS 383
V+ ++ + ++P++ T SI++ + ++A M ++ + V I+
Sbjct: 499 IVFSNILEKGLKPNNYTYSILIDGCFR-NHDEQNALEVVNHMTSSNIEVNGVVYQTIING 557
Query: 384 FCAEGLVSRALIIQSEM-EKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKP 442
C G S+A + + M E+K + + + YN+++D F K ++ A + EM + P
Sbjct: 558 LCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISP 617
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADA 502
T+ LM+ + + + EM++ G+K +Y LI + ++ M +A
Sbjct: 618 NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASA-L 676
Query: 503 FLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR 562
F ++ + G+ P+ Y +LI + G A ++ M ++G++ + TYTTL+DG +
Sbjct: 677 FSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLK 736
Query: 563 AGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMT 622
G+ +++ M + + ++ + ++V+G +K+GQ+++ + E K + P V+
Sbjct: 737 DGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLI 796
Query: 623 YNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
YN ++ + R G + +L EM + PD T+ ++
Sbjct: 797 YNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 185/401 (46%), Gaps = 13/401 (3%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWK---VYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDA 358
D +Y+ A+ CC + A + E EK P T + ++ K G + DA
Sbjct: 267 DSLLYSLAVQA--CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQG-NMDDA 323
Query: 359 WYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDA 418
++M G+ + +++ C + AL++ +MEK+G N++ ++ L++
Sbjct: 324 IRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEW 383
Query: 419 FCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPT 478
F K+ +E+A + +M+ + P+ + ++ + + + + L E + GL
Sbjct: 384 FRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL--- 440
Query: 479 ANSYTC--LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYV 536
AN + C ++S +Q K +D A + KM+ GI P SY ++ + + A +
Sbjct: 441 ANVFVCNTILSWLCKQGK-TDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARI 499
Query: 537 AFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFA 596
F N+ +G+KP+ TY+ L+DG R D Q +++ M S +E V + +++G
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559
Query: 597 KQGQYMEARDVISE-FGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDS 655
K GQ +AR++++ + L + M+YN +++ + + G+ +EM + P+
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619
Query: 656 VTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+TY++++ +M G +D+ +Y L
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGAL 660
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 157/347 (45%), Gaps = 5/347 (1%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D ++F N+ + + Y+ I G ++A +V M NI + V +
Sbjct: 495 DLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTI 554
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ + K+G+++K + K + S +I+ F EG + A+ EM G
Sbjct: 555 INGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNG 614
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
+ N I Y +LM+ CK+N +++A + EMK K VK + L+ + +R +
Sbjct: 615 ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA--DAFLKMKKVGIKPTSHSYTALI 522
L +E+ + GL P+ Y LIS + + + +M A D + KM K G++ +YT LI
Sbjct: 675 ALFSELLEEGLNPSQPIYNSLISGF---RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLI 731
Query: 523 HAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVE 582
G A + MQ G+ P YT +++G + G ++K+++ M V
Sbjct: 732 DGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVT 791
Query: 583 GTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
+ +N ++ G ++G EA + E G+ P T+++L++
Sbjct: 792 PNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 142/310 (45%), Gaps = 3/310 (0%)
Query: 354 SAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYN 413
S +A + +M GV ++++ E + AL + S ++G ++++Y+
Sbjct: 213 SLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYS 272
Query: 414 TLMDAFCKSNHVEEAEGLFVEMKAKNV-KPTAATFNILMHAYSRRMQPKIVENLLAEMQD 472
+ A CK+ + A L EMK K + P+ T+ ++ A ++ L EM
Sbjct: 273 LAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLS 332
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHE 532
G+ + T LI+ + + + A F KM+K G P S +++ LI + +G E
Sbjct: 333 DGISMNVVAATSLITGHCKNNDLVS-ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391
Query: 533 KAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILV 592
KA ++ M+ G+ PS+ T++ G+ + + +K++ + V N ++
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC-NTIL 450
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLK 652
KQG+ EA +++S+ G+ P V++YN +M + R + + LK
Sbjct: 451 SWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLK 510
Query: 653 PDSVTYSTMI 662
P++ TYS +I
Sbjct: 511 PNNYTYSILI 520
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 110/234 (47%), Gaps = 2/234 (0%)
Query: 413 NTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQD 472
N + A + N + EA+ L+ M A V T +LM A R +P +L+ +
Sbjct: 202 NRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIE 261
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI-KPTSHSYTALIHAYSVSGWH 531
G +P + Y+ + A + ++ MA +MK+ + P+ +YT++I A G
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLA-MANSLLREMKEKKLCVPSQETYTSVILASVKQGNM 320
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
+ A + M +GI ++ T+L+ G + D + + ++ M E VTF++L
Sbjct: 321 DDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVL 380
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 645
++ F K G+ +A + + +GL P+V + ++ + +G +H + +L E
Sbjct: 381 IEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE 434
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 1/156 (0%)
Query: 305 IYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEK 364
IYN+ ISG G A +Y+ M KD +R D T + ++ + K G A + +
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLIL-ASELYTE 749
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
M G+ E + IV +G + + + EM+K V N ++YN ++ + +
Sbjct: 750 MQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN 809
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQP 460
++EA L EM K + P ATF+IL+ +QP
Sbjct: 810 LDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQP 845
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 113/260 (43%), Gaps = 2/260 (0%)
Query: 404 GVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIV 463
G N+ +N L++A+ K + A + +M +V P N + A +R
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 464 ENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIH 523
+ L + M IG+ + L+ A R++K ++ A + + + G +P S Y+ +
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAE-ALEVLSRAIERGAEPDSLLYSLAVQ 276
Query: 524 AYSVSGWHEKAYVAFENMQREGI-KPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVE 582
A + A M+ + + PS ETYT+++ + G+ +++ M+S+ +
Sbjct: 277 ACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGIS 336
Query: 583 GTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQL 642
V L+ G K + A + + K G P +T+++L+ + + G+ K +
Sbjct: 337 MNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEF 396
Query: 643 LKEMAALNLKPDSVTYSTMI 662
K+M L L P T+I
Sbjct: 397 YKKMEVLGLTPSVFHVHTII 416
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 172/376 (45%), Gaps = 19/376 (5%)
Query: 288 MVLFRNLPSSKKFRD-VHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVT 346
M F +P S+ + +H +N ++GL+ ++ +Y M + PD ++++
Sbjct: 84 MCTFGVVPDSRLWNSLIHQFN--VNGLV----HDQVSLIYSKMIACGVSPDVFALNVLIH 137
Query: 347 VMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVF 406
K+GR + + + + + ++ C GL A SEM K G+
Sbjct: 138 SFCKVGRLS----FAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGIL 193
Query: 407 SNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENL 466
+ + YNTL+D FCK + A+ L E+ N+ T IL+ +Y +E
Sbjct: 194 PDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL----ITHTILLSSY---YNLHAIEEA 246
Query: 467 LAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYS 526
+M G P +++ +I+ + K+ + +M+++ + P +YT L+ +
Sbjct: 247 YRDMVMSGFDPDVVTFSSIINRLCKGGKVLE-GGLLLREMEEMSVYPNHVTYTTLVDSLF 305
Query: 527 VSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKV 586
+ + A + M GI + YT L+DG +AGD + K +K+++ + V
Sbjct: 306 KANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVV 365
Query: 587 TFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
T+ LVDG K G A +I++ + + P V+TY+ ++N Y + G + LL++M
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 647 AALNLKPDSVTYSTMI 662
N+ P+ TY T+I
Sbjct: 426 EDQNVVPNGFTYGTVI 441
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 155/361 (42%), Gaps = 38/361 (10%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV YN ISG+L G+ W Y+ M + I PD T +IM+ RK G S
Sbjct: 538 DVVSYNVLISGMLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQGDS------- 589
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
EG+ L + +M+ G+ + + N ++ C+
Sbjct: 590 -------------------------EGI----LKLWDKMKSCGIKPSLMSCNIVVGMLCE 620
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ +EEA + +M + P T+ I + S+ + + + G+K +
Sbjct: 621 NGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV 680
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LI+ + M+ AA M+ G P + ++ +L+H Y V KA + M
Sbjct: 681 YNTLIATLCKLG-MTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVM 739
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
GI P++ TY T++ G AG + + K M S + T+N L+ G AK G
Sbjct: 740 MEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNM 799
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
+ + E GL P TYN+L++ +A G+ + +LLKEM + P++ TY TM
Sbjct: 800 KGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTM 859
Query: 662 I 662
I
Sbjct: 860 I 860
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 189/430 (43%), Gaps = 38/430 (8%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ +Y + GL G +A K ++ + +DN P+ VT + +V + K G A +
Sbjct: 328 DLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAG-DLSSAEFI 386
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
+M K V + +++ + +G++ A+ + +ME + V N Y T++D K
Sbjct: 387 ITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFK 446
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ E A L EM+ V+ + L++ R + K V+ L+ +M G+ +
Sbjct: 447 AGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQIN 506
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
YT LI + + A A +M++ G+ SY LI G A A++ M
Sbjct: 507 YTSLIDVFFKGGDEEAALAWA-EEMQERGMPWDVVSYNVLISGMLKFG-KVGADWAYKGM 564
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
+ +GI+P I T+ +++ R+ GD++ ++K+W M S ++ + ++ NI+V + G+
Sbjct: 565 REKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKM 624
Query: 602 MEARDVISEFGKIGLHPTVMTY-----------------------------------NML 626
EA ++++ + +HP + TY N L
Sbjct: 625 EEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTL 684
Query: 627 MNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQ 686
+ + G K ++ +M A PD+VT++++++ + M+++G
Sbjct: 685 IATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI 744
Query: 687 VMDVDSYQKL 696
+V +Y +
Sbjct: 745 SPNVATYNTI 754
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 162/390 (41%), Gaps = 32/390 (8%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAK----- 356
D YN ISGL G ++A++ M K I PD V+ + ++ K+G +
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALV 219
Query: 357 ---------------DAWY-------FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRAL 394
++Y + M G +I+ C G V
Sbjct: 220 DEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGG 279
Query: 395 IIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAY 454
++ EME+ V+ N + Y TL+D+ K+N A L+ +M + + + +LM
Sbjct: 280 LLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGL 339
Query: 455 SRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFL--KMKKVGIK 512
+ + E + + P +YT L+ K D+++ F+ +M + +
Sbjct: 340 FKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC---KAGDLSSAEFIITQMLEKSVI 396
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI 572
P +Y+++I+ Y G E+A M+ + + P+ TY T++DG +AG + +++
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Query: 573 WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
K M VE + LV+ + G+ E + ++ + G+ + Y L++ + +
Sbjct: 457 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Query: 633 GGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
GG +EM + D V+Y+ +I
Sbjct: 517 GGDEEAALAWAEEMQERGMPWDVVSYNVLI 546
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 146/339 (43%), Gaps = 3/339 (0%)
Query: 324 KVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKS 383
+ Y M PD VT S ++ + K G+ + +M V + +V S
Sbjct: 245 EAYRDMVMSGFDPDVVTFSSIINRLCKGGK-VLEGGLLLREMEEMSVYPNHVTYTTLVDS 303
Query: 384 FCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPT 443
+ AL + S+M +G+ + +VY LMD K+ + EAE F + N P
Sbjct: 304 LFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPN 363
Query: 444 AATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAF 503
T+ L+ + E ++ +M + + P +Y+ +I+ Y +K M + A
Sbjct: 364 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGY-VKKGMLEEAVSLL 422
Query: 504 LKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRA 563
KM+ + P +Y +I +G E A + M+ G++ + L++ +R
Sbjct: 423 RKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRI 482
Query: 564 GDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTY 623
G + + + K M+S+ V ++ + L+D F K G A E + G+ V++Y
Sbjct: 483 GRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSY 542
Query: 624 NMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
N+L++ + G+ K M ++PD T++ M+
Sbjct: 543 NVLISGMLKFGKVGA-DWAYKGMREKGIEPDIATFNIMM 580
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGW-HEKAYVAFENMQREGIKPSIETYTTLL 557
AA M G+ P S + +LIH ++V+G H++ + + M G+ P + L+
Sbjct: 77 AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 136
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
F + G + L+ + + VT+N ++ G + G EA +SE K+G+
Sbjct: 137 HSFCKVGRLSFAI---SLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGIL 193
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
P ++YN L++ + + G + L+ E++ LNL ++ S+
Sbjct: 194 PDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSS 236
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 152/305 (49%), Gaps = 4/305 (1%)
Query: 359 WYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDA 418
W +M + S + + + + + G +A+ + M + G F + +NT++D
Sbjct: 111 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170
Query: 419 FCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR-RMQPKIVENLLAEMQDIGLKP 477
CKS VE+A LF ++ + T T+N++++ + + PK +E +L EM + G+ P
Sbjct: 171 LCKSKRVEKAYELFRALRGRFSVDTV-TYNVILNGWCLIKRTPKALE-VLKEMVERGINP 228
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
+Y ++ + R ++ A + FL+MKK + +YT ++H + V+G ++A
Sbjct: 229 NLTTYNTMLKGFFRAGQIRH-AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAK 597
F+ M REG+ PS+ TY ++ + + + + +++ M+ E T+N+L+ G
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 598 QGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
G++ +++ G P TYNM++ Y+ + K L ++M + + P+ T
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDT 407
Query: 658 YSTMI 662
Y+ +I
Sbjct: 408 YNILI 412
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 137/328 (41%), Gaps = 38/328 (11%)
Query: 267 TPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVY 326
+P+ ++ AG DK + LF N+ F+D+ +N + L R E A++++
Sbjct: 125 SPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF 184
Query: 327 ESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCA 386
++ GR + D + I+ +C
Sbjct: 185 RALR---------------------GRFSVDTVTY----------------NVILNGWCL 207
Query: 387 EGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAAT 446
+AL + EM ++G+ N YNT++ F ++ + A F+EMK ++ + T
Sbjct: 208 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
+ ++H + + K N+ EM G+ P+ +Y +I ++ + + A F +M
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN-AVVMFEEM 326
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
+ G +P +Y LI +G + + M+ EG +P+ +TY ++ + +
Sbjct: 327 VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEV 386
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDG 594
+ + +++ M S T+NIL+ G
Sbjct: 387 EKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 3/261 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D YN ++G R A +V + M + I P+ T + M+ + G+ + AW F
Sbjct: 194 DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ-IRHAWEF 252
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F +M ++ + +V F G + RA + EM ++GV + YN ++ CK
Sbjct: 253 FLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCK 312
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
++VE A +F EM + +P T+N+L+ + E L+ M++ G +P +
Sbjct: 313 KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQT 372
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA-FEN 540
Y +I Y ++ + A F KM P +Y LI V E VA +
Sbjct: 373 YNMMIRYYSECSEV-EKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQA 431
Query: 541 MQREGIKPSIETYTTLLDGFR 561
+E ++ ++ + LL FR
Sbjct: 432 FAKEILRLQSKSGSRLLRKFR 452
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 95/196 (48%), Gaps = 1/196 (0%)
Query: 505 KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAG 564
+M+ + I P+ ++ + Y+ +G +KA F NM G + ++ T+LD ++
Sbjct: 116 RMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSK 175
Query: 565 DTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYN 624
+ ++++ + + VT+N++++G+ + +A +V+ E + G++P + TYN
Sbjct: 176 RVEKAYELFRALRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYN 234
Query: 625 MLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKS 684
++ + R GQ + EM + + D VTY+T+++ +MI+
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIRE 294
Query: 685 GQVMDVDSYQKLRAIL 700
G + V +Y + +L
Sbjct: 295 GVLPSVATYNAMIQVL 310
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 168/361 (46%), Gaps = 6/361 (1%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
+N ++GL G E A + M + P+ V+ + ++ + + K A Y F M
Sbjct: 159 HNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDK-ALYLFNTM 217
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLV--SRALIIQSEMEKKGVFS--NAIVYNTLMDAFCK 421
N+ G++ + IV + C +G++ + +++ ++ + + ++ LMD+ K
Sbjct: 218 NKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFK 277
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ +V +A ++ EM KNV + +N+++ + +M G+ P +
Sbjct: 278 NGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFT 337
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LISA ++ K D A D M+ G+ P SY +I + G +A +M
Sbjct: 338 YNTLISALCKEGKF-DEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSM 396
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
+ + P + + ++DG+ R GDT + + + LM+S V+ T N L+ G+ K G+
Sbjct: 397 LKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRL 456
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
++A V +E +HP TYN+L+ A G QL EM +PD +TY+ +
Sbjct: 457 IDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTEL 516
Query: 662 I 662
+
Sbjct: 517 V 517
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 172/411 (41%), Gaps = 13/411 (3%)
Query: 257 WMRAQE------PSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAI 310
W+R + P L+T L L +AG +K L R + + YN I
Sbjct: 142 WLRKKMIYSGVIPGLITHNH---LLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLI 198
Query: 311 SGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM--NRK 368
GL + A ++ +M K IRP+ VTC+I+V + + G + E++ + +
Sbjct: 199 KGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQ 258
Query: 369 GVKWSEEVLGAIVKSFC-AEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEE 427
+ V+ I+ C G V +AL + EM +K V ++++VYN ++ C S ++
Sbjct: 259 ANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVA 318
Query: 428 AEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLIS 487
A G +M + V P T+N L+ A + + +L MQ+ G+ P SY +I
Sbjct: 319 AYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQ 378
Query: 488 AYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIK 547
+ + A + L M K + P + +I Y G A M G+K
Sbjct: 379 GLCIHGDV-NRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVK 437
Query: 548 PSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDV 607
P++ T L+ G+ + G + M S K+ T+N+L+ G A +
Sbjct: 438 PNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQL 497
Query: 608 ISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
E + G P ++TY L+ G+ K LL + A + D V +
Sbjct: 498 YDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPF 548
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 164/408 (40%), Gaps = 55/408 (13%)
Query: 337 DHVTC-SIMVTVMRKLGRSAK--DAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRA 393
D+ C SI ++MR L K A + +KM GV ++ C G + +A
Sbjct: 116 DYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKA 175
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA 453
+ EM + G N + YNTL+ C N+V++A LF M ++P T NI++HA
Sbjct: 176 DGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHA 235
Query: 454 YSRRMQPKIVEN----LLAEMQDIGLKPTANS------YTCLISAYGRQKKMSDMAADAF 503
Q ++ N LL E+ D AN+ T L+ + + + A + +
Sbjct: 236 LC---QKGVIGNNNKKLLEEILD---SSQANAPLDIVICTILMDSCFKNGNVVQ-ALEVW 288
Query: 504 LKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRA 563
+M + + S Y +I SG AY +M + G+ P + TY TL+ +
Sbjct: 289 KEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKE 348
Query: 564 GDTQTMMKIWKLMMSEKVEGTKVTF----------------------------------- 588
G + M + V ++++
Sbjct: 349 GKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLW 408
Query: 589 NILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA 648
N+++DG+ + G A V++ G+ P V T N L++ Y +GG+ + EM +
Sbjct: 409 NVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRS 468
Query: 649 LNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+ PD+ TY+ ++ + +M++ G D+ +Y +L
Sbjct: 469 TKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTEL 516
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 120/334 (35%), Gaps = 37/334 (11%)
Query: 271 CTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESME 330
CT+L + G + + +++ + D +YN I GL G A+ M
Sbjct: 268 CTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMV 327
Query: 331 KDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLV 390
K + PD T ++ + C EG
Sbjct: 328 KRGVNPDVFT------------------------------------YNTLISALCKEGKF 351
Query: 391 SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
A + M+ GV + I Y ++ C V A + M ++ P +N++
Sbjct: 352 DEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVV 411
Query: 451 MHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVG 510
+ Y R ++L M G+KP + LI Y + ++ D A +M+
Sbjct: 412 IDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLID-AWWVKNEMRSTK 470
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
I P + +Y L+ A G A+ ++ M R G +P I TYT L+ G G +
Sbjct: 471 IHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAE 530
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA 604
+ + + + V F IL + + + EA
Sbjct: 531 SLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 94/241 (39%), Gaps = 38/241 (15%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMV---------------- 345
DV YN IS L G++++A ++ +M+ + PD ++ +++
Sbjct: 334 DVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFL 393
Query: 346 ----------------TVMRKLGR--SAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAE 387
V+ GR A M GVK + A++ +
Sbjct: 394 LSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKG 453
Query: 388 GLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATF 447
G + A +++EM + + YN L+ A C H+ A L+ EM + +P T+
Sbjct: 454 GRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITY 513
Query: 448 NILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMK 507
L+ + + K E+LL+ +Q G+ + L Y R ++ +A+L K
Sbjct: 514 TELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQR----PGEAYLVYK 569
Query: 508 K 508
K
Sbjct: 570 K 570
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 175/396 (44%), Gaps = 43/396 (10%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
+V Y I GL GR +A+ +Y + K + P VT S ++ K G + + +
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG-NLRSGFAL 448
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
+E M + G + G +V +GL+ A+ +M + + N +V+N+L+D +C+
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMH------AYSRRMQPKIVENLLAEMQ---- 471
N +EA +F M +KP ATF +M A+ + M+P I L MQ
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKI 568
Query: 472 --DIG-----------------------------LKPTANSYTCLISAYGRQKKMSDMAA 500
DI ++P +Y +I Y +++ D A
Sbjct: 569 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL-DEAE 627
Query: 501 DAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
F +K P + + T LIH + + A F M +G KP+ TY L+D F
Sbjct: 628 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 687
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTV 620
++ D + K+++ M + + + V+++I++DG K+G+ EA ++ + L P V
Sbjct: 688 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 747
Query: 621 MTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSV 656
+ Y +L+ Y + G+ + L + M +KPD +
Sbjct: 748 VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 115/248 (46%), Gaps = 1/248 (0%)
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
++ FC G + RA + ME++G+ + I Y+TL+D + K+ + LF + K
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
VK F+ + Y + + M G+ P +YT LI + ++ + A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE-A 410
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
+ ++ K G++P+ +Y++LI + G + +E+M + G P + Y L+DG
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 560 FRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPT 619
+ G M+ M+ + + V FN L+DG+ + ++ EA V G G+ P
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 620 VMTYNMLM 627
V T+ +M
Sbjct: 531 VATFTTVM 538
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 130/268 (48%), Gaps = 6/268 (2%)
Query: 395 IIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAY 454
+ + +E GV ++ V + L FCK V +A + + + + N ++
Sbjct: 207 LCRGGIEPSGVSAHGFVLDAL---FCKG-EVTKALDFHRLVMERGFRVGIVSCNKVLKGL 262
Query: 455 SRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPT 514
S Q ++ LL+ + D G P ++ LI+ + ++ +M D A D F M++ GI+P
Sbjct: 263 SVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEM-DRAFDLFKVMEQRGIEPD 320
Query: 515 SHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK 574
+Y+ LI Y +G + F +G+K + +++ +D + ++GD T ++K
Sbjct: 321 LIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK 380
Query: 575 LMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGG 634
M+ + + VT+ IL+ G + G+ EA + + K G+ P+++TY+ L++ + + G
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 635 QHSKLPQLLKEMAALNLKPDSVTYSTMI 662
L ++M + PD V Y ++
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 162/369 (43%), Gaps = 10/369 (2%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
+V + I+G G + A+ +++ ME+ I PD + S ++ K G F
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
+ ++ KGVK V + + + G ++ A ++ M +G+ N + Y L+ C+
Sbjct: 345 SQALH-KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ EA G++ ++ + ++P+ T++ L+ + + + L +M +G P
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 482 YTCLISAYGRQKKMSDMAADAF-LKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
Y L+ +Q M + A F +KM I+ + +LI + ++A F
Sbjct: 464 YGVLVDGLSKQGLM--LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 541 MQREGIKPSIETYTTLL------DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDG 594
M GIKP + T+TT++ D F + ++++ LM K+ N+++
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
K + +A + + + P ++TYN ++ Y + + ++ + + P+
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641
Query: 655 SVTYSTMIY 663
+VT + +I+
Sbjct: 642 TVTLTILIH 650
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 139/302 (46%), Gaps = 3/302 (0%)
Query: 362 FEKMNRKGVKWSE-EVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
F+K+ R G++ S G ++ + +G V++AL + ++G + N ++
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL- 262
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
+ +E A L + P TF L++ + +R + +L M+ G++P
Sbjct: 263 SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
+Y+ LI Y + M M F + G+K +++ I Y SG A V ++
Sbjct: 323 AYSTLIDGYFKAG-MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
M +GI P++ TYT L+ G + G ++ ++ +E + VT++ L+DGF K G
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
+ + K+G P V+ Y +L++ ++ G + +M +++ + V +++
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 661 MI 662
+I
Sbjct: 502 LI 503
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 2/232 (0%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
LF + +K D+ + N I L C R EDA K + ++ + + PD VT + M+
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 618
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
L R +A FE + + L ++ C + A+ + S M +KG NA
Sbjct: 619 SL-RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
+ Y LMD F KS +E + LF EM+ K + P+ +++I++ +R + N+ +
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Query: 470 MQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAL 521
D L P +Y LI Y + ++ + AA + M + G+KP AL
Sbjct: 738 AIDAKLLPDVVAYAILIRGYCKVGRLVE-AALLYEHMLRNGVKPDDLLQRAL 788
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 188/456 (41%), Gaps = 33/456 (7%)
Query: 272 TVLFPLLGRA----GMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYE 327
T F LL RA D LF +P + + + G G + ++
Sbjct: 147 TYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLN 206
Query: 328 SMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAE 387
+ME + P+ V + +V+ + GR+ D+ EKM +G+ + + + C E
Sbjct: 207 AMESFGVLPNKVIYNTIVSSFCREGRN-DDSEKMVEKMREEGLVPDIVTFNSRISALCKE 265
Query: 388 GLVSRALIIQSEMEKKGVFS----NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPT 443
G V A I S+ME N+I YN ++ FCK +E+A+ LF ++ + +
Sbjct: 266 GKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLAS 325
Query: 444 AATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAF 503
++NI + R + E +L +M D G+ P+ SY L+ + +SD
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385
Query: 504 LKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRA 563
L MK+ G+ P + +Y L+H Y G + A + M R P+ T LL +
Sbjct: 386 L-MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 564 GDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVI--------SEFGKIG 615
G ++ + M + VT NI+VDG G+ +A +++ + G +G
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 616 ---------------LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
P ++TY+ L+N + G+ ++ L EM L+PDSV Y+
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564
Query: 661 MIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
I+ K M K G +++Y L
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 172/390 (44%), Gaps = 33/390 (8%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNI----RPDHVTCSIMVTVMRKLGRSAKD 357
D+ +N+ IS L G+ DA +++ ME D RP+ +T ++M+ K+G +D
Sbjct: 251 DIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL-LED 309
Query: 358 AWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMD 417
A FE + S + ++ G A + +M KG+ + YN LMD
Sbjct: 310 AKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMD 369
Query: 418 AFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKP 477
CK + +A+ + MK V P A T+ L+H Y + ++LL EM P
Sbjct: 370 GLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP 429
Query: 478 TANSYTC--LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
N+YTC L+ + + ++S+ A + KM + G + + ++ SG +KA
Sbjct: 430 --NAYTCNILLHSLWKMGRISE-AEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 536 VAFENMQREGIK-----------------------PSIETYTTLLDGFRRAGDTQTMMKI 572
+ M+ G P + TY+TLL+G +AG +
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Query: 573 WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
+ MM EK++ V +NI + F KQG+ A V+ + K G H ++ TYN L+
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606
Query: 633 GGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
Q ++ L+ EM + P+ TY+T I
Sbjct: 607 KNQIFEIHGLMDEMKEKGISPNICTYNTAI 636
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 164/362 (45%), Gaps = 35/362 (9%)
Query: 303 VHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY-F 361
V++YN + + R E +Y+ M I P T ++++ + S DA
Sbjct: 112 VYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRAL--CDSSCVDAAREL 169
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F++M KG K +E G +V+ +C GL + L + + ME GV N ++YNT++ +FC+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+++E + +M+ + + P TFN + A + + K+++
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK--EGKVLD----------------- 270
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
+ SDM D +L + +P S +Y ++ + G E A FE++
Sbjct: 271 ---------ASRIFSDMELDEYLGLP----RPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
+ S+++Y L G R G + K M + + + ++NIL+DG K G
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
+A+ ++ + G+ P +TY L++ Y G+ LL+EM N P++ T + +
Sbjct: 378 SDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNIL 437
Query: 662 IY 663
++
Sbjct: 438 LH 439
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 171/398 (42%), Gaps = 35/398 (8%)
Query: 265 LVTPRACTVLFPLL----GRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYE 320
L PR ++ + L+ + G+ + LF ++ + + YN + GL+ G++
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFI 343
Query: 321 DAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAI 380
+A V + M I P + +I++ + KLG + DA M R GV G +
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLS-DAKTIVGLMKRNGVCPDAVTYGCL 402
Query: 381 VKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV 440
+ +C+ G V A + EM + NA N L+ + K + EAE L +M K
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 441 KPTAATFNILMHAYSRRMQ----PKIVENL-------LAEMQD--IGLK----------P 477
T NI++ + +IV+ + L + + IGL P
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLP 522
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
+Y+ L++ + + ++ A + F +M ++P S +Y IH + G A+
Sbjct: 523 DLITYSTLLNGLCKAGRFAE-AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK---VTFNILVDG 594
++M+++G S+ETY +L+ G G + +I LM K +G T+N +
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGL---GIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQY 638
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
+ + +A +++ E + + P V ++ L+ A+ +
Sbjct: 639 LCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 119/294 (40%), Gaps = 6/294 (2%)
Query: 325 VYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSF 384
V +S+ ++N PD +T S ++ + K GR A+ F E M K ++ + F
Sbjct: 511 VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK-LQPDSVAYNIFIHHF 569
Query: 385 CAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTA 444
C +G +S A + +MEKKG + YN+L+ N + E GL EMK K + P
Sbjct: 570 CKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNI 629
Query: 445 ATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFL 504
T+N + + + NLL EM + P S+ LI A+ + DMA + F
Sbjct: 630 CTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDF-DMAQEVFE 688
Query: 505 KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAG 564
+ Y+ + + +G KA E + G + Y L++ +
Sbjct: 689 TAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKD 747
Query: 565 DTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR---DVISEFGKIG 615
+ + I M+ ++DG K G EA D + E +G
Sbjct: 748 ELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVG 801
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 7/227 (3%)
Query: 414 TLMDAFCKSNHVEEAEGLFVEMKAK--NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
+++ F KSNH+++A F ++++ KP+ +N+L+ + + + + V L +M
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV 139
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
G+ P ++ LI A D A + F +M + G KP ++ L+ Y +G
Sbjct: 140 LCGIAPQTYTFNLLIRALC-DSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT 198
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
+K M+ G+ P+ Y T++ F R G K+ + M E + VTFN
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSR 258
Query: 592 VDGFAKQGQYMEARDVISEF---GKIGL-HPTVMTYNMLMNAYARGG 634
+ K+G+ ++A + S+ +GL P +TYN+++ + + G
Sbjct: 259 ISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVG 305
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 79/180 (43%), Gaps = 2/180 (1%)
Query: 517 SYTALIHAYSVSGWHEKAYVAFENMQRE--GIKPSIETYTTLLDGFRRAGDTQTMMKIWK 574
S +++ ++ S +KA+ F+ ++ KPS+ Y LL+ + + + ++K
Sbjct: 77 SLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYK 136
Query: 575 LMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGG 634
M+ + TFN+L+ AR++ E + G P T+ +L+ Y + G
Sbjct: 137 DMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAG 196
Query: 635 QHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQ 694
K +LL M + + P+ V Y+T++ ++M + G V D+ ++
Sbjct: 197 LTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFN 256
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 192/434 (44%), Gaps = 22/434 (5%)
Query: 237 EVLEVLGKERLLVCCL--YFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNL 294
+ E +GK ++ C L F +R + S + V + GM D + L R
Sbjct: 461 QAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYV------KHGMVDDCLGLLR-- 512
Query: 295 PSSKKFRDV----HIYNAAISGLLCCGRYEDAWKVYE-SMEKDNIRPDHVTCSIMVTVMR 349
KK+RD H+Y+ I G+ DA K+Y ME D H+T S M+ +
Sbjct: 513 --EKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHIT-STMIDIYT 569
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEM-EKKGVFSN 408
+G + +A + + GV +V+ + G + A + M E+K + +
Sbjct: 570 VMGEFS-EAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPD 628
Query: 409 AIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLA 468
++ ++ + K + ++ + L+ ++ + +N +++ +R + +
Sbjct: 629 VYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFE 688
Query: 469 EMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVS 528
EM G P ++ L+ YG+ K + + FL K+ G+ SY +I AY +
Sbjct: 689 EMIRYGFTPNTVTFNVLLDVYGKAK-LFKKVNELFLLAKRHGVVDVI-SYNTIIAAYGKN 746
Query: 529 GWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTF 588
+ A +NMQ +G S+E Y TLLD + + + I K M T+
Sbjct: 747 KDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTY 806
Query: 589 NILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA 648
NI+++ + +QG E DV+ E + GL P + +YN L+ AY GG + L+KEM
Sbjct: 807 NIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRG 866
Query: 649 LNLKPDSVTYSTMI 662
N+ PD VTY+ ++
Sbjct: 867 RNIIPDKVTYTNLV 880
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 151/333 (45%), Gaps = 9/333 (2%)
Query: 274 LFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESM-EKD 332
++ ++G +KL + NL SS D ++ + + G E+A V E M E+
Sbjct: 567 IYTVMGEFSEAEKL---YLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQK 623
Query: 333 NIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSR 392
+I PD M+ + +K K + + ++ + G+ W++E+ ++ CA L
Sbjct: 624 DIVPDVYLFRDMLRIYQKCDLQDK-LQHLYYRIRKSGIHWNQEMYNCVINC-CARALPLD 681
Query: 393 ALI-IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILM 451
L EM + G N + +N L+D + K+ ++ LF+ K V ++N ++
Sbjct: 682 ELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTII 740
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI 511
AY + + + + MQ G + +Y L+ AYG+ K+M + +MKK
Sbjct: 741 AAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRS-ILKRMKKSTS 799
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMK 571
P ++Y +I+ Y GW ++ + ++ G+ P + +Y TL+ + G + +
Sbjct: 800 GPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVG 859
Query: 572 IWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA 604
+ K M + KVT+ LV + +++EA
Sbjct: 860 LVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEA 892
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 151/347 (43%), Gaps = 5/347 (1%)
Query: 254 FFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKF-RDVHIYNAAISG 312
FF WMR + A +++ +LGR D+ L + L +F + ++N I
Sbjct: 160 FFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYA 219
Query: 313 LLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKW 372
G + A K + M + +RP+ T +++ + +K + ++A + F M + G+
Sbjct: 220 CTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQK-NWNVEEAEFAFSHMRKFGIV- 277
Query: 373 SEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLF 432
E +++ + L +A + M++ V + +++A+ + +E AE +
Sbjct: 278 CESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESIL 337
Query: 433 VEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQ 492
V M+A P +N L+ Y + + + + L + +IGL+P SY +I +GR
Sbjct: 338 VSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRA 397
Query: 493 KKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIET 552
+ A + ++K+ G KP S + LI+ + G + A E+M G + S
Sbjct: 398 DNYEE-AKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS-SI 455
Query: 553 YTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
+L + + G + + K + + +F+ LV + K G
Sbjct: 456 LGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHG 502
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 129/290 (44%), Gaps = 13/290 (4%)
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAI-----------VYNTLMDAFCKSNHVE 426
G +V +F A L+ R L + E ++ + V+NT++ A K +V+
Sbjct: 168 GKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVK 227
Query: 427 EAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLI 486
A F M V+P AT +LM Y + + E + M+ G+ ++Y+ +I
Sbjct: 228 LASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI-VCESAYSSMI 286
Query: 487 SAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGI 546
+ Y R + + D A + MK+ ++ ++ +++AYS G E A +M+ G
Sbjct: 287 TIYTRLR-LYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGF 345
Query: 547 KPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARD 606
P+I Y TL+ G+ + + ++ + + +E + ++ +++G+ + Y EA+
Sbjct: 346 SPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKH 405
Query: 607 VISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSV 656
E + G P L+N A+ G + +++M + + S+
Sbjct: 406 YYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSI 455
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 114/257 (44%), Gaps = 3/257 (1%)
Query: 407 SNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA-KNVKPTAATFNILMHAYSRRMQPKIVEN 465
N + Y+ ++ + + AE L E+ + + FN +++A +++ K+
Sbjct: 172 GNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASK 231
Query: 466 LLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAY 525
M + G++P + L+ Y + + + A AF M+K GI S +Y+++I Y
Sbjct: 232 WFHMMLEFGVRPNVATIGMLMGLYQKNWNVEE-AEFAFSHMRKFGIVCES-AYSSMITIY 289
Query: 526 SVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK 585
+ ++KA + M+++ ++ +E + +L+ + + G + I M +
Sbjct: 290 TRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNI 349
Query: 586 VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 645
+ +N L+ G+ K + A+ + IGL P +Y ++ + R + + +E
Sbjct: 350 IAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQE 409
Query: 646 MAALNLKPDSVTYSTMI 662
+ KP+S T+I
Sbjct: 410 LKRCGYKPNSFNLFTLI 426
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 161/337 (47%), Gaps = 18/337 (5%)
Query: 290 LFRNLPSSKKFRD----------------VHIYNAAISGLLCCGRYEDAWKVYESMEKDN 333
LF+ KKFR+ V NA +S LL GR + A + Y M +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK 233
Query: 334 IRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRA 393
I P+ T +++++ + G+ K + M R G + ++ ++ C +GL+S A
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDK-GIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA 453
L +++ M K G+ N + +NTL+ FC++ ++EA +F EMKA NV P T+N L++
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 454 YSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKP 513
YS++ ++ +M G++ +Y LI +Q K + AA ++ K + P
Sbjct: 353 YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK-TRKAAQFVKELDKENLVP 411
Query: 514 TSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIW 573
S +++ALI V ++ + +++M R G P+ +T+ L+ F R D ++
Sbjct: 412 NSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVL 471
Query: 574 KLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE 610
+ M+ + T + + +G QG+ + ++ E
Sbjct: 472 REMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQE 508
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 138/305 (45%), Gaps = 4/305 (1%)
Query: 353 RSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVY 412
R+A D F +M G + E A + S +G V AL EM + + N
Sbjct: 185 RNATDT---FMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTL 241
Query: 413 NTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQD 472
N +M +C+S +++ L +M+ + T ++N L+ + + L M
Sbjct: 242 NMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGK 301
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHE 532
GL+P ++ LI + R K+ + A+ F +MK V + P + +Y LI+ YS G HE
Sbjct: 302 SGLQPNVVTFNTLIHGFCRAMKLQE-ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 533 KAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILV 592
A+ +E+M GI+ I TY L+ G + T+ + K + E + TF+ L+
Sbjct: 361 MAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLK 652
G + ++ + G HP T+NML++A+ R Q+L+EM ++
Sbjct: 421 MGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Query: 653 PDSVT 657
DS T
Sbjct: 481 LDSRT 485
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 124/275 (45%), Gaps = 1/275 (0%)
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM 470
V+++L F A F++MK PT + N M + + + I EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 471 QDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW 530
+ + P + ++S Y R K+ D + M+++G + T SY LI + G
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKL-DKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 531 HEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI 590
A M + G++P++ T+ TL+ GF RA Q K++ M + V VT+N
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 591 LVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN 650
L++G+++QG + A + G+ ++TYN L+ + + K Q +KE+ N
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 651 LKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSG 685
L P+S T+S +I +K MI+SG
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 182/433 (42%), Gaps = 32/433 (7%)
Query: 237 EVLEVLGKERLLVCCLYFFQWMRAQEP-------------SLVTPR----ACTVLFPLLG 279
VL + K+ LL L FF W + + P +L R A ++L +L
Sbjct: 86 NVLLKIQKDYLL--SLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLV 143
Query: 280 RAGMG------DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDN 333
G+ D L+ +R S+ + ++++ ++ +A + M+
Sbjct: 144 NGGVDLPAKVFDALLYSYRECDSTPR-----VFDSLFKTFAHLKKFRNATDTFMQMKDYG 198
Query: 334 IRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRA 393
P +C+ ++ + GR A F+ +M R + + L ++ +C G + +
Sbjct: 199 FLPTVESCNAYMSSLLGQGR-VDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA 453
+ + +ME+ G + + YNTL+ C+ + A L M ++P TFN L+H
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 454 YSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKP 513
+ R M+ + + EM+ + + P +Y LI+ Y +Q +MA + M GI+
Sbjct: 318 FCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD-HEMAFRFYEDMVCNGIQR 376
Query: 514 TSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIW 573
+Y ALI KA + + +E + P+ T++ L+ G + +++
Sbjct: 377 DILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELY 436
Query: 574 KLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARG 633
K M+ + TFN+LV F + + A V+ E + + T + + N
Sbjct: 437 KSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQ 496
Query: 634 GQHSKLPQLLKEM 646
G+ + +LL+EM
Sbjct: 497 GKDQLVKKLLQEM 509
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 118/254 (46%), Gaps = 1/254 (0%)
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADA 502
T F+ L ++ + + + +M+D G PT S +S+ Q ++ D+A
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV-DIALRF 225
Query: 503 FLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR 562
+ +M++ I P ++ ++ Y SG +K ++M+R G + + +Y TL+ G
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 563 AGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMT 622
G + +K+ +M ++ VTFN L+ GF + + EA V E + + P +T
Sbjct: 286 KGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVT 345
Query: 623 YNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMI 682
YN L+N Y++ G H + ++M ++ D +TY+ +I+ + K++
Sbjct: 346 YNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELD 405
Query: 683 KSGQVMDVDSYQKL 696
K V + ++ L
Sbjct: 406 KENLVPNSSTFSAL 419
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 112/236 (47%), Gaps = 3/236 (1%)
Query: 461 KIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTA 520
K+ + LL ++ P + L + KK + A D F++MK G PT S A
Sbjct: 152 KVFDALLYSYRECDSTPRV--FDSLFKTFAHLKKFRN-ATDTFMQMKDYGFLPTVESCNA 208
Query: 521 LIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEK 580
+ + G + A + M+R I P+ T ++ G+ R+G +++ + M
Sbjct: 209 YMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLG 268
Query: 581 VEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLP 640
T V++N L+ G ++G A + + GK GL P V+T+N L++ + R + +
Sbjct: 269 FRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEAS 328
Query: 641 QLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
++ EM A+N+ P++VTY+T+I +++ M+ +G D+ +Y L
Sbjct: 329 KVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNAL 384
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 161/337 (47%), Gaps = 18/337 (5%)
Query: 290 LFRNLPSSKKFRD----------------VHIYNAAISGLLCCGRYEDAWKVYESMEKDN 333
LF+ KKFR+ V NA +S LL GR + A + Y M +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK 233
Query: 334 IRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRA 393
I P+ T +++++ + G+ K + M R G + ++ ++ C +GL+S A
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDK-GIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA 453
L +++ M K G+ N + +NTL+ FC++ ++EA +F EMKA NV P T+N L++
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 454 YSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKP 513
YS++ ++ +M G++ +Y LI +Q K + AA ++ K + P
Sbjct: 353 YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK-TRKAAQFVKELDKENLVP 411
Query: 514 TSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIW 573
S +++ALI V ++ + +++M R G P+ +T+ L+ F R D ++
Sbjct: 412 NSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVL 471
Query: 574 KLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE 610
+ M+ + T + + +G QG+ + ++ E
Sbjct: 472 REMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQE 508
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 138/305 (45%), Gaps = 4/305 (1%)
Query: 353 RSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVY 412
R+A D F +M G + E A + S +G V AL EM + + N
Sbjct: 185 RNATDT---FMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTL 241
Query: 413 NTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQD 472
N +M +C+S +++ L +M+ + T ++N L+ + + L M
Sbjct: 242 NMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGK 301
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHE 532
GL+P ++ LI + R K+ + A+ F +MK V + P + +Y LI+ YS G HE
Sbjct: 302 SGLQPNVVTFNTLIHGFCRAMKLQE-ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 533 KAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILV 592
A+ +E+M GI+ I TY L+ G + T+ + K + E + TF+ L+
Sbjct: 361 MAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLK 652
G + ++ + G HP T+NML++A+ R Q+L+EM ++
Sbjct: 421 MGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Query: 653 PDSVT 657
DS T
Sbjct: 481 LDSRT 485
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 124/275 (45%), Gaps = 1/275 (0%)
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM 470
V+++L F A F++MK PT + N M + + + I EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 471 QDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW 530
+ + P + ++S Y R K+ D + M+++G + T SY LI + G
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKL-DKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 531 HEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI 590
A M + G++P++ T+ TL+ GF RA Q K++ M + V VT+N
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 591 LVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN 650
L++G+++QG + A + G+ ++TYN L+ + + K Q +KE+ N
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 651 LKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSG 685
L P+S T+S +I +K MI+SG
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 182/433 (42%), Gaps = 32/433 (7%)
Query: 237 EVLEVLGKERLLVCCLYFFQWMRAQEP-------------SLVTPR----ACTVLFPLLG 279
VL + K+ LL L FF W + + P +L R A ++L +L
Sbjct: 86 NVLLKIQKDYLL--SLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLV 143
Query: 280 RAGMG------DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDN 333
G+ D L+ +R S+ + ++++ ++ +A + M+
Sbjct: 144 NGGVDLPAKVFDALLYSYRECDSTPR-----VFDSLFKTFAHLKKFRNATDTFMQMKDYG 198
Query: 334 IRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRA 393
P +C+ ++ + GR A F+ +M R + + L ++ +C G + +
Sbjct: 199 FLPTVESCNAYMSSLLGQGR-VDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA 453
+ + +ME+ G + + YNTL+ C+ + A L M ++P TFN L+H
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 454 YSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKP 513
+ R M+ + + EM+ + + P +Y LI+ Y +Q +MA + M GI+
Sbjct: 318 FCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD-HEMAFRFYEDMVCNGIQR 376
Query: 514 TSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIW 573
+Y ALI KA + + +E + P+ T++ L+ G + +++
Sbjct: 377 DILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELY 436
Query: 574 KLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARG 633
K M+ + TFN+LV F + + A V+ E + + T + + N
Sbjct: 437 KSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQ 496
Query: 634 GQHSKLPQLLKEM 646
G+ + +LL+EM
Sbjct: 497 GKDQLVKKLLQEM 509
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 118/254 (46%), Gaps = 1/254 (0%)
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADA 502
T F+ L ++ + + + +M+D G PT S +S+ Q ++ D+A
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV-DIALRF 225
Query: 503 FLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR 562
+ +M++ I P ++ ++ Y SG +K ++M+R G + + +Y TL+ G
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 563 AGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMT 622
G + +K+ +M ++ VTFN L+ GF + + EA V E + + P +T
Sbjct: 286 KGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVT 345
Query: 623 YNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMI 682
YN L+N Y++ G H + ++M ++ D +TY+ +I+ + K++
Sbjct: 346 YNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELD 405
Query: 683 KSGQVMDVDSYQKL 696
K V + ++ L
Sbjct: 406 KENLVPNSSTFSAL 419
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 112/236 (47%), Gaps = 3/236 (1%)
Query: 461 KIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTA 520
K+ + LL ++ P + L + KK + A D F++MK G PT S A
Sbjct: 152 KVFDALLYSYRECDSTPRV--FDSLFKTFAHLKKFRN-ATDTFMQMKDYGFLPTVESCNA 208
Query: 521 LIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEK 580
+ + G + A + M+R I P+ T ++ G+ R+G +++ + M
Sbjct: 209 YMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLG 268
Query: 581 VEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLP 640
T V++N L+ G ++G A + + GK GL P V+T+N L++ + R + +
Sbjct: 269 FRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEAS 328
Query: 641 QLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
++ EM A+N+ P++VTY+T+I +++ M+ +G D+ +Y L
Sbjct: 329 KVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNAL 384
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 181/394 (45%), Gaps = 8/394 (2%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T + G+ + K + NL S + D+ +N+ +S CG YE A ++ +M +
Sbjct: 756 TDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMR 815
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
D P + +I++ + GR ++ + E++ G K S+ + ++ +F G +
Sbjct: 816 DGPSPTVESINILLHALCVDGR-LEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILM 451
I S M+ G +Y +++ CK V +AE + EM+ N K A +N ++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFL---KMKK 508
Y+ K + +++ GL+P +Y LI Y R ++ + +L +M+
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRR----PEEGYLLMQQMRN 990
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
+G+ P +Y +LI A+ E+A FE + +G+K Y T++ R +G
Sbjct: 991 LGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSK 1050
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMN 628
K+ ++M + +E T T ++L+ ++ G EA V+S + T + Y+ +++
Sbjct: 1051 AEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVID 1110
Query: 629 AYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
AY R ++ + L EM L+PD ++ +
Sbjct: 1111 AYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFV 1144
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 177/413 (42%), Gaps = 39/413 (9%)
Query: 252 LYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAIS 311
L F+W+ + R + +LGR + +F + R V +YNA +
Sbjct: 175 LEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDR-VQVYNAMMG 233
Query: 312 GLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVK 371
G++ A ++ ++M + PD ++ + ++ K G
Sbjct: 234 VYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSG------------------- 274
Query: 372 WSEEVLGAIVKSFCAEGLV-SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEG 430
GL + A+ + + G+ +AI YNTL+ A + ++++ A
Sbjct: 275 ----------------GLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVK 318
Query: 431 LFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYG 490
+F +M+A +P T+N ++ Y R E L E++ G P A +Y L+ A+
Sbjct: 319 VFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFA 378
Query: 491 RQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQR-EGIKPS 549
R++ ++ + + +M+K+G +Y +IH Y G + A +++M+ G P
Sbjct: 379 RERN-TEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD 437
Query: 550 IETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVIS 609
TYT L+D +A T + M+ ++ T T++ L+ G+AK G+ EA D S
Sbjct: 438 AITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFS 497
Query: 610 EFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ G P + Y+++++ RG + K L ++M + P Y MI
Sbjct: 498 CMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 164/363 (45%), Gaps = 42/363 (11%)
Query: 259 RAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFR-DVHIYNAAISGLLCCG 317
R P L++ T++ L G+ L V ++ + R D YN +S
Sbjct: 254 RGCVPDLISFN--TLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDS 311
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
+ A KV+E ME +PD T + M++V + G +A+ F E
Sbjct: 312 NLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFME-------------- 357
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
+E KG F +A+ YN+L+ AF + + E+ + ++ +M+
Sbjct: 358 ----------------------LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK 395
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDI-GLKPTANSYTCLISAYGRQKKMS 496
T+N ++H Y ++ Q + L +M+ + G P A +YT LI + G+ +
Sbjct: 396 MGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTV 455
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
+ AA +M VGIKPT +Y+ALI Y+ +G E+A F M R G KP Y+ +
Sbjct: 456 EAAA-LMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVM 514
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKI-G 615
LD R +T+ +++ M+S+ + + +++ G K+ + + + I + ++ G
Sbjct: 515 LDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCG 574
Query: 616 LHP 618
++P
Sbjct: 575 MNP 577
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 131/300 (43%), Gaps = 2/300 (0%)
Query: 398 SEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK-PTAATFNILMHAYSR 456
S++ G ++ V +++ +CK E A + + + K + + ++ AY +
Sbjct: 705 SDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGK 764
Query: 457 RMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSH 516
+ + E+++ ++ G P ++ L+SAY Q + A F M + G PT
Sbjct: 765 QKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYA-QCGCYERARAIFNTMMRDGPSPTVE 823
Query: 517 SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM 576
S L+HA V G E+ YV E +Q G K S + +LD F RAG+ + KI+ M
Sbjct: 824 SINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSM 883
Query: 577 MSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQH 636
+ T + ++++ K + +A ++SE + + +N ++ Y +
Sbjct: 884 KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDY 943
Query: 637 SKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
K Q+ + + L+PD TY+T+I +QM G +D+Y+ L
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW--HEKAYVAFE 539
Y ++ Y R K S A + M++ G P S+ LI+A SG A +
Sbjct: 228 YNAMMGVYSRSGKFSK-AQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
++ G++P TY TLL R + +K+++ M + + + T+N ++ + + G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
EA + E G P +TYN L+ A+AR K+ ++ ++M + D +TY+
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 660 TMIY 663
T+I+
Sbjct: 407 TIIH 410
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 96/222 (43%), Gaps = 4/222 (1%)
Query: 477 PTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYV 536
P A ++ GR + S +A + F + + + Y A++ YS SG KA
Sbjct: 189 PNARMVAAILGVLGRWNQES-LAVEIFTRAEPT-VGDRVQVYNAMMGVYSRSGKFSKAQE 246
Query: 537 AFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMM--SEKVEGTKVTFNILVDG 594
+ M++ G P + ++ TL++ ++G + + L M + + +T+N L+
Sbjct: 247 LVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSA 306
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
++ A V + P + TYN +++ Y R G ++ +L E+ PD
Sbjct: 307 CSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPD 366
Query: 655 SVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+VTY++++Y ++QM K G D +Y +
Sbjct: 367 AVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 178/385 (46%), Gaps = 20/385 (5%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSE-EV 376
RY + +VY+SM K +++ MR+ G W E+M ++ + E E+
Sbjct: 142 RYCHSIEVYKSMVK------------ILSKMRQFGA----VWGLIEEMRKENPQLIEPEL 185
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
+V+ F + +V +A+ + EM K G + V+ L+DA CK V++A LF +M+
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 245
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMS 496
+ F L++ + R + + +L +M + G +P YT L+S Y KM+
Sbjct: 246 MR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA 304
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
D A D M++ G +P ++ YT LI A E+A F M+R + + TYT L
Sbjct: 305 D-AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTAL 363
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
+ GF + G + M+ + + +++T+ ++ K+ + E +++ + +I
Sbjct: 364 VSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEY 423
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXX 676
HP + YN+++ + G+ + +L EM L P T+ MI
Sbjct: 424 HPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASD 483
Query: 677 YHKQMIKSGQVMDVDSYQKLRAILD 701
+ K+M+ G + V Y L+ +L+
Sbjct: 484 HFKEMVTRG-LFSVSQYGTLKLLLN 507
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 2/218 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ Y +SG G+ DA+ + M + P+ ++++ + K+ R ++A
Sbjct: 286 DIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR-MEEAMKV 344
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F +M R + A+V FC G + + I+ +M KKG+ + + Y +M A K
Sbjct: 345 FVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEK 404
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
EE L +M+ P +N+++ + + K L EM++ GL P ++
Sbjct: 405 KESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDT 464
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYT 519
+ +I+ Q + + A+D F +M G+ S T
Sbjct: 465 FVIMINGLASQGCLLE-ASDHFKEMVTRGLFSVSQYGT 501
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 5/264 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
+ + Y I L R E+A KV+ ME+ D VT + +V+ K G+ K +
Sbjct: 321 NANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDK-CYIV 379
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
+ M +KG+ SE I+ + + L + +M + + +YN ++ CK
Sbjct: 380 LDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACK 439
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
V+EA L+ EM+ + P TF I+++ + + + EM GL +
Sbjct: 440 LGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQY 499
Query: 482 YT--CLISAYGRQKKMSDMAADAFLKMKKVG-IKPTSHSYTALIHAYSVSGWHEKAYVAF 538
T L++ + KK+ +MA D + + G + S+T IHA G+ ++A
Sbjct: 500 GTLKLLLNTVLKDKKL-EMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYC 558
Query: 539 ENMQREGIKPSIETYTTLLDGFRR 562
M P +T+ L+ G ++
Sbjct: 559 IEMIEMDFMPQPDTFAKLMKGLKK 582
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 168/371 (45%), Gaps = 3/371 (0%)
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIV 381
A + + M + PD V+ +I++ + + G+ DA + M R GV + A+V
Sbjct: 133 AVQTFFCMVQRGREPDVVSYTILINGLFRAGK-VTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 382 KSFCAEGLVSRAL-IIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV 440
C V A ++ E++ V + +VYN L+ FCK+ +E+AE L M
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC 251
Query: 441 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA 500
+P T+N+L++ Y K E ++AEM G++ A SY L+ + R
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311
Query: 501 DAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
+M+ G SY+ LI + + KAY FE M+++G+ ++ TYT+L+ F
Sbjct: 312 FMVKEMEPRGFCDVV-SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTV 620
R G++ K+ M + ++ + ++D K G +A V ++ + + P
Sbjct: 371 LREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDA 430
Query: 621 MTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQ 680
++YN L++ R G+ ++ +L ++M PD +T+ +I Q
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQ 490
Query: 681 MIKSGQVMDVD 691
M+ G +D D
Sbjct: 491 MMDKGFTLDRD 501
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 165/363 (45%), Gaps = 5/363 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV Y I+GL G+ DA +++ +M + + PD+ C+ +V + R A+
Sbjct: 148 DVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCH-ARKVDLAYEM 206
Query: 362 F-EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
E++ VK S V A++ FC G + +A ++S M K G + + YN L++ +
Sbjct: 207 VAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYY 266
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLA-EMQDIGLKPTA 479
+N ++ AEG+ EM ++ A ++N L+ + R P N + EM+ G
Sbjct: 267 DNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVV 326
Query: 480 NSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
SY+ LI + R + A F +M++ G+ +YT+LI A+ G A +
Sbjct: 327 -SYSTLIETFCRASN-TRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
M G+ P YTT+LD ++G+ ++ M+ ++ +++N L+ G + G
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
+ EA + + P +T+ ++ RG + S ++ +M D
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSD 504
Query: 660 TMI 662
T+I
Sbjct: 505 TLI 507
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 132/296 (44%), Gaps = 9/296 (3%)
Query: 375 EVLGAI-------VKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEE 427
+ LGA+ + + G++ A+ + EM + YN + + + E
Sbjct: 3 QTLGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFEL 62
Query: 428 AEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLIS 487
AE ++ +MK T++ + + + +++ LL++M+ +G P ++ +
Sbjct: 63 AEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLD 122
Query: 488 AYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIK 547
R+ K+ A F M + G +P SYT LI+ +G A + M R G+
Sbjct: 123 LLCRENKVG-FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVS 181
Query: 548 PSIETYTTLLDGFRRAGDTQTMMK-IWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARD 606
P + L+ G A + + + + S +V+ + V +N L+ GF K G+ +A
Sbjct: 182 PDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEA 241
Query: 607 VISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ S KIG P ++TYN+L+N Y + ++ EM ++ D+ +Y+ ++
Sbjct: 242 LKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLL 297
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 7/205 (3%)
Query: 298 KKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKD 357
+ F DV Y+ I A++++E M + + + VT + ++ + G S+
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSV- 378
Query: 358 AWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMD 417
A ++M G+ I+ C G V +A + ++M + + +AI YN+L+
Sbjct: 379 AKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLIS 438
Query: 418 AFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKP 477
C+S V EA LF +MK K P TF ++ R + + +M D G
Sbjct: 439 GLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTL 498
Query: 478 TANSYTCLISAYGRQKKMSDMAADA 502
+ LI K M+ADA
Sbjct: 499 DRDVSDTLI------KASCSMSADA 517
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 184/401 (45%), Gaps = 12/401 (2%)
Query: 303 VHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFF 362
V +YNA I+GL Y+ A+++ M + I P+ ++ S ++ V+ G+ + A+ F
Sbjct: 246 VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQ-IELAFSFL 304
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKK-GVFSNAIVYNTLMDAFCK 421
+M ++G + L ++VK G AL + ++M + G+ N + YNTL+ FC
Sbjct: 305 TQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCS 364
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
++ +A +F M+ P T+ L++ +++R + +M G P
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV 424
Query: 482 YTCLISAYGRQKKMSDMAADAFLK-MKKVGIKPTSHSYTALIHAYSVSG---WHEKAYVA 537
YT ++ A R K + A++ ++ M K P+ ++ A I +G W EK +
Sbjct: 425 YTNMVEALCRHSKFKE--AESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAK 597
E R P+I TY LLDG +A + + + + VE + T+N L+ G
Sbjct: 483 MEQQHR--CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCN 540
Query: 598 QGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLK--PDS 655
G A ++ + G P +T NM++ AY + G+ + Q+L ++ K PD
Sbjct: 541 AGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDV 600
Query: 656 VTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
++Y+ +I+ ++MI +G V + ++ L
Sbjct: 601 ISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVL 641
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 156/349 (44%), Gaps = 32/349 (9%)
Query: 346 TVMRKLGRSAK--DAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKK 403
++RKL + Y ++M +G SE++ +++ + GL RA+ + +++
Sbjct: 81 VMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEF 140
Query: 404 GVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIV 463
G + +YN ++D N ++ ++ +MK +P T+N+L+ A + +
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200
Query: 464 ENLLAEMQDIGLKPTANSYTCLISA---YGRQKKMSDMAA-------------------- 500
+ LL EM + G P A SYT +IS+ G K+ ++A
Sbjct: 201 KKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEH 260
Query: 501 ---DAFLKMKKV---GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYT 554
AF M+++ GI P SY+ LI+ SG E A+ M + G P+I T +
Sbjct: 261 DYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLS 320
Query: 555 TLLDGFRRAGDTQTMMKIWKLMMSE-KVEGTKVTFNILVDGFAKQGQYMEARDVISEFGK 613
+L+ G G T + +W M+ ++ V +N LV GF G ++A V S +
Sbjct: 321 SLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380
Query: 614 IGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
IG P + TY L+N +A+ G + +M P+ V Y+ M+
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMV 429
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 167/385 (43%), Gaps = 9/385 (2%)
Query: 280 RAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHV 339
+ G+ ++ + +F + V IYN + LL R + + VY M++D P+
Sbjct: 123 QVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVF 182
Query: 340 TCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSE 399
T ++++ + K A +M+ KG ++ S C GLV +
Sbjct: 183 TYNVLLKALCK-NNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER 241
Query: 400 MEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQ 459
E V S VYN L++ CK + + A L EM K + P +++ L++ Q
Sbjct: 242 FEP--VVS---VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQ 296
Query: 460 PKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM-KKVGIKPTSHSY 518
++ + L +M G P + + L+ + D A D + +M + G++P +Y
Sbjct: 297 IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD-ALDLWNQMIRGFGLQPNVVAY 355
Query: 519 TALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMS 578
L+ + G KA F +M+ G P+I TY +L++GF + G + IW M++
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 579 EKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSK 638
V + +V+ + ++ EA +I K P+V T+N + G+
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 475
Query: 639 LPQLLKEMAALN-LKPDSVTYSTMI 662
++ ++M + P+ VTY+ ++
Sbjct: 476 AEKVFRQMEQQHRCPPNIVTYNELL 500
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 7/263 (2%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
++ Y + I+G G + A ++ M P+ V + MV + + + K+A
Sbjct: 386 NIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK-FKEAESL 444
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG-VFSNAIVYNTLMDAFC 420
E M+++ S A +K C G + A + +ME++ N + YN L+D
Sbjct: 445 IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLA 504
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
K+N +EEA GL E+ + V+ +++T+N L+H P I L+ +M G P
Sbjct: 505 KANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEI 564
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVG---IKPTSHSYTALIHAYSVSGWHEKAYVA 537
+ +I AY +Q K A L + G +P SYT +I S E +
Sbjct: 565 TMNMIILAYCKQGKAERAA--QMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVIL 622
Query: 538 FENMQREGIKPSIETYTTLLDGF 560
E M GI PSI T++ L++ F
Sbjct: 623 LERMISAGIVPSIATWSVLINCF 645
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 491 RQKKMSDMAADAFLKMKKVGI-KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPS 549
RQ+ +A F + + K T ++ +I ++ G + + M+ +G S
Sbjct: 51 RQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCS 110
Query: 550 IETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVIS 609
+ + +++ +R+ G + ++++ + + + +N ++D + + V
Sbjct: 111 EDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYR 170
Query: 610 EFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ + G P V TYN+L+ A + + +LL EM+ PD+V+Y+T+I
Sbjct: 171 DMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVI 223
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 183/411 (44%), Gaps = 11/411 (2%)
Query: 257 WMRAQEPSLVTPRACT--VLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLL 314
W R E S V P T ++ L + G D + ++ + +++ +D++ Y++ I GL
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 315 CCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGR--SAKDAWYFFEKMNRKGVKW 372
G + A V+ +++ D VT + M+ + G+ + + W E N +
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV- 360
Query: 373 SEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLF 432
S +L +K G + A +I M KG ++ Y + C + +V +A G+
Sbjct: 361 SYNIL---IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 433 VEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQ 492
E+++ + ++ ++ + + NL+ EM G++ ++ LI R
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 493 KKMSDMAADAFLK-MKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIE 551
++ + A FL+ M K G +PT SY LI +G +A + M G KP ++
Sbjct: 478 SRLGE--ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 552 TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF 611
TY+ LL G R +++W + +E + NIL+ G G+ +A V++
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 612 GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
++TYN LM + + G ++ + M + L+PD ++Y+T++
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 175/416 (42%), Gaps = 43/416 (10%)
Query: 251 CLYFFQWMRA--QEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNA 308
CL ++ M+ +E L T + L L AG DK +F L K DV YN
Sbjct: 274 CLKIWERMKQNEREKDLYTYSS---LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNT 330
Query: 309 AISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRK 368
+ G CG+ +++ +++ ME N + V+ +I++ + + G+ +A + M K
Sbjct: 331 MLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGK-IDEATMIWRLMPAK 388
Query: 369 GVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEA 428
G + G + C G V++AL + E+E G + Y +++D CK +EEA
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448
Query: 429 EGLFVEMKAKNV-----------------------------------KPTAATFNILMHA 453
L EM V +PT ++NIL+
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG 508
Query: 454 YSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKP 513
+ + + EM + G KP +Y+ L+ R +K+ D+A + + + + G++
Sbjct: 509 LCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI-DLALELWHQFLQSGLET 567
Query: 514 TSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIW 573
+ LIH G + A NM+ ++ TY TL++GF + GD+ IW
Sbjct: 568 DVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
Query: 574 KLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
M ++ +++N ++ G A + + G+ PTV T+N+L+ A
Sbjct: 628 GYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 134/303 (44%), Gaps = 3/303 (0%)
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
F GV + + ++K C + +A M K+G + Y+T+++
Sbjct: 136 LFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLA 195
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE-MQDIGLKPTA 479
K+ +++A LF EM + V P +NIL+ + + K L ++D + P
Sbjct: 196 KAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNV 255
Query: 480 NSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
++ +IS + ++ D + +MK+ + ++Y++LIH +G +KA F
Sbjct: 256 KTHNIMISGLSKCGRVDD-CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
+ + TY T+L GF R G + +++W++ M K V++NIL+ G + G
Sbjct: 315 ELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRI-MEHKNSVNIVSYNILIKGLLENG 373
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
+ EA + G TY + ++ G +K +++E+ + D Y+
Sbjct: 374 KIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYA 433
Query: 660 TMI 662
++I
Sbjct: 434 SII 436
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 152/372 (40%), Gaps = 38/372 (10%)
Query: 292 RNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKL 351
R L S + +V +N ISGL CGR +D K++E M+++ D T S ++ +
Sbjct: 244 RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 303
Query: 352 GRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIV 411
G K A F +++ + ++ FC G + +L + ME K N +
Sbjct: 304 GNVDK-AESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVS 361
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
YN L+ ++ ++EA ++ M AK T+ I +H ++ E++
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
G +Y +I ++K++ + A++ +M K G++ SH ALI
Sbjct: 422 SSGGHLDVYAYASIIDCLCKKKRLEE-ASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
+A M + G +P++ V++NIL
Sbjct: 481 GEASFFLREMGKNGCRPTV-----------------------------------VSYNIL 505
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
+ G K G++ EA + E + G P + TY++L+ R + +L + L
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Query: 652 KPDSVTYSTMIY 663
+ D + ++ +I+
Sbjct: 566 ETDVMMHNILIH 577
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 125/273 (45%), Gaps = 7/273 (2%)
Query: 395 IIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAY 454
+ S G +A+VY+ ++ ++ V + ++++ K ++ Y
Sbjct: 29 LFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTY 88
Query: 455 SRRMQPKIVENLLAEMQDI-GLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKP 513
+ P ++ M++I G +P SY L++A+ K+ + + F + G+ P
Sbjct: 89 GKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVES-LFAYFETAGVAP 147
Query: 514 TSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIW 573
+Y LI EKA + M +EG KP + +Y+T+++ +AG ++++
Sbjct: 148 NLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELF 207
Query: 574 KLMMSEKVEGTKVTFNILVDGFAKQGQY---MEARDVISEFGKIGLHPTVMTYNMLMNAY 630
M V +NIL+DGF K+ + ME D + E + +P V T+N++++
Sbjct: 208 DEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSV--YPNVKTHNIMISGL 265
Query: 631 ARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
++ G+ ++ + M + D TYS++I+
Sbjct: 266 SKCGRVDDCLKIWERMKQNEREKDLYTYSSLIH 298
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 36/186 (19%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
++L L R D + L+ S DV ++N I GL G+ +DA V +ME
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
N + VT + ++ K+G S +
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDS------------------------------------N 621
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILM 451
RA +I M K G+ + I YNT+M C V A F + + + PT T+NIL+
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Query: 452 HAYSRR 457
A R
Sbjct: 682 RAVVNR 687
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 161/349 (46%), Gaps = 4/349 (1%)
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEV 376
G+ DA KV M++ + P+ + C+ + V + R K A F E+M G+ +
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEK-ALRFLERMQVVGIVPNVVT 314
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM- 435
+++ +C V A+ + +M KG + + Y T+M CK + E L +M
Sbjct: 315 YNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMA 374
Query: 436 KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
K + P T+N L+H ++ L + Q+ G + Y+ ++ A ++ +M
Sbjct: 375 KEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRM 434
Query: 496 SDMAADAFLKMKKVG-IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYT 554
S+ A D +M G P +YTA+++ + G +KA + M G KP+ +YT
Sbjct: 435 SE-AKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYT 493
Query: 555 TLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKI 614
LL+G R G + ++ + +T+++++ G ++G+ EA DV+ E
Sbjct: 494 ALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLK 553
Query: 615 GLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
G P + N+L+ + R G+ + + ++E + V ++T+I+
Sbjct: 554 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIH 602
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 158/343 (46%), Gaps = 9/343 (2%)
Query: 356 KDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
+DA M R GV+ + + + F + +AL M+ G+ N + YN +
Sbjct: 259 RDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCM 318
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM-QDIG 474
+ +C + VEEA L +M +K P ++ +M + + V +L+ +M ++ G
Sbjct: 319 IRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHG 378
Query: 475 LKPTANSYTCLISAYGRQKKMSDMAADA--FLK-MKKVGIKPTSHSYTALIHAYSVSGWH 531
L P +Y LI + D A +A FLK ++ G + Y+A++HA G
Sbjct: 379 LVPDQVTYNTLIHMLTKH----DHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRM 434
Query: 532 EKAYVAFENMQREG-IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI 590
+A M +G P + TYT +++GF R G+ K+ ++M + + V++
Sbjct: 435 SEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 494
Query: 591 LVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN 650
L++G + G+ +EAR++++ + P +TY+++M+ R G+ S+ +++EM
Sbjct: 495 LLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKG 554
Query: 651 LKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSY 693
P V + ++ + ++ + G ++V ++
Sbjct: 555 FFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNF 597
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 168/407 (41%), Gaps = 13/407 (3%)
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
EP+L+ C + RA +K + + +V YN I G R E+
Sbjct: 274 EPNLLI---CNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEE 330
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAK--DAWYFFEKMNRK-GVKWSEEVLG 378
A ++ E M PD V+ T+M L + + + +KM ++ G+ +
Sbjct: 331 AIELLEDMHSKGCLPDKVS---YYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
++ AL + ++KG + + Y+ ++ A CK + EA+ L EM +K
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSK 447
Query: 439 -NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
+ P T+ +++ + R + + LL M G KP SYT L++ R K
Sbjct: 448 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK--S 505
Query: 498 MAADAFLKMKKVGI-KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
+ A + M + P S +Y+ ++H G +A M +G P L
Sbjct: 506 LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLL 565
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
L R G T K + +++ V F ++ GF + + A V+ + I
Sbjct: 566 LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK 625
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
H V TY L++ + G+ ++ +L+K+M + P VTY T+I+
Sbjct: 626 HADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 672
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 156/343 (45%), Gaps = 5/343 (1%)
Query: 309 AISGLLCC-GRYEDAWKVYESMEKDN-IRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMN 366
I G LC R + + + M K++ + PD VT + ++ ++ K A +A +F +
Sbjct: 352 TIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDH-ADEALWFLKDAQ 410
Query: 367 RKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG-VFSNAIVYNTLMDAFCKSNHV 425
KG + + AIV + C EG +S A + +EM KG + + Y +++ FC+ V
Sbjct: 411 EKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEV 470
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
++A+ L M KP ++ L++ R + ++ ++ P + +Y+ +
Sbjct: 471 DKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVI 530
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
+ R+ K+S+ A D +M G P L+ + G +A E +G
Sbjct: 531 MHGLRREGKLSE-ACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
++ +TT++ GF + + + + M T+ LVD K+G+ EA
Sbjct: 590 CAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEAT 649
Query: 606 DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA 648
+++ + G+ PT +TY +++ Y + G+ L +L++M +
Sbjct: 650 ELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 692
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 170/422 (40%), Gaps = 9/422 (2%)
Query: 236 WEVLEVLGKERLLVCCLYFFQWMRAQEPSLVTPRAC-TVLFPLLGRAGMGDKLMVLFRNL 294
+ ++ L KE+ +V + M A+E LV + L +L + D+ + ++
Sbjct: 351 YTIMGYLCKEKRIVEVRDLMKKM-AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKD- 408
Query: 295 PSSKKFR-DVHIYNAAISGLLCCGRYEDAWK-VYESMEKDNIRPDHVTCSIMVTVMRKLG 352
K FR D Y+A + L GR +A + E + K + PD VT + +V +LG
Sbjct: 409 AQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLG 468
Query: 353 RSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVY 412
K A + M+ G K + A++ C G A + + E+ N+I Y
Sbjct: 469 EVDK-AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITY 527
Query: 413 NTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQD 472
+ +M + + EA + EM K P N+L+ + R + + E +
Sbjct: 528 SVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLN 587
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHE 532
G ++T +I + + ++ D A M + +YT L+ G
Sbjct: 588 KGCAINVVNFTTVIHGFCQNDEL-DAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIA 646
Query: 533 KAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILV 592
+A + M +GI P+ TY T++ + + G ++ I + M+S + + +N ++
Sbjct: 647 EATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR--QKCRTIYNQVI 704
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLK 652
+ G+ EA ++ + + T LM Y + G ++ M NL
Sbjct: 705 EKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLI 764
Query: 653 PD 654
PD
Sbjct: 765 PD 766
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 161/382 (42%), Gaps = 5/382 (1%)
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGR-SAKDAWYFFEKMNRKGVKWSEE 375
G E A V++ M + PD + +MV + G+ D W M ++G
Sbjct: 196 GLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRW--LTGMIQRGFIPDNA 253
Query: 376 VLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM 435
I+ + C GLV+RA+ +M G N I + +L+D CK +++A + EM
Sbjct: 254 TCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313
Query: 436 KAKNVKPTAATFNILMHAYSRR-MQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKK 494
KP T L+ +R K L ++ KP ++YT +I Y ++ K
Sbjct: 314 VRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDK 373
Query: 495 MSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYT 554
+ + A F +MK+ G+ P ++YT LI+ + +G +AY M EG P+I TY
Sbjct: 374 L-NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYN 432
Query: 555 TLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKI 614
+D + ++ S +E VT+ IL+ KQ +A K
Sbjct: 433 AAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
Query: 615 GLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXX 674
G + N+L+ A+ R + + +L + + +L L P TY++MI
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLA 552
Query: 675 XXYHKQMIKSGQVMDVDSYQKL 696
Y M + G V D +Y L
Sbjct: 553 LKYFHNMKRHGCVPDSFTYGSL 574
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 163/391 (41%), Gaps = 15/391 (3%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D Y + G G+ ++A + M + PD+ TC++++T + + G + WYF
Sbjct: 216 DSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYF 275
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
KM G K + +++ C +G + +A + EM + G N + L+D CK
Sbjct: 276 -RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 334
Query: 422 SNHVEEAEGLFVEM-KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
E+A LF+++ ++ KP T+ ++ Y + + E L + M++ GL P N
Sbjct: 335 RGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 394
Query: 481 SYTCLIS------AYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKA 534
+YT LI+ ++GR ++ ++ D G P ++Y A I + +A
Sbjct: 395 TYTTLINGHCKAGSFGRAYELMNLMGDE-------GFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 535 YVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDG 594
Y G++ TYT L+ + D + + M E NIL+
Sbjct: 448 YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
F +Q + E+ + +GL PT TY +++ Y + G + M PD
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD 567
Query: 655 SVTYSTMIYXXXXXXXXXXXXXYHKQMIKSG 685
S TY ++I ++ MI G
Sbjct: 568 SFTYGSLISGLCKKSMVDEACKLYEAMIDRG 598
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 157/358 (43%), Gaps = 3/358 (0%)
Query: 329 MEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEG 388
+ N++ H M+ ++GR +A M +G+ S + +++ G
Sbjct: 138 LANGNLQKAHEVMRCMLRNFSEIGR-LNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELG 196
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
L+ A + EM +GV ++ Y ++ + ++EA+ M + P AT
Sbjct: 197 LIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCT 256
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK 508
+++ A +M D+G KP ++T LI ++ + A + +M +
Sbjct: 257 LILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ-AFEMLEEMVR 315
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQR-EGIKPSIETYTTLLDGFRRAGDTQ 567
G KP +++TALI GW EKA+ F + R + KP++ TYT+++ G+ +
Sbjct: 316 NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLN 375
Query: 568 TMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLM 627
++ M + + T+ L++G K G + A ++++ G G P + TYN +
Sbjct: 376 RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAI 435
Query: 628 NAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSG 685
++ + + + +LL + + L+ D VTY+ +I + +M K+G
Sbjct: 436 DSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTG 493
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 162/374 (43%), Gaps = 1/374 (0%)
Query: 271 CTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESME 330
CT++ L G+ ++ + FR + ++ + + I GL G + A+++ E M
Sbjct: 255 CTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMV 314
Query: 331 KDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLV 390
++ +P+ T + ++ + K G + K F + + K + +++ +C E +
Sbjct: 315 RNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKL 374
Query: 391 SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
+RA ++ S M+++G+F N Y TL++ CK+ A L M + P T+N
Sbjct: 375 NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAA 434
Query: 451 MHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVG 510
+ + ++ + LL + GL+ +YT LI +Q ++ A F +M K G
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALA-FFCRMNKTG 493
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
+ LI A+ +++ F+ + G+ P+ ETYT+++ + + GD +
Sbjct: 494 FEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLAL 553
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAY 630
K + M T+ L+ G K+ EA + GL P +T L Y
Sbjct: 554 KYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEY 613
Query: 631 ARGGQHSKLPQLLK 644
+ + LL+
Sbjct: 614 CKRNDSANAMILLE 627
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 171/385 (44%), Gaps = 5/385 (1%)
Query: 279 GRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYE-SMEKDNIRPD 337
G AG + M +F +P R V N ++ L+ R++ +++ S E I P+
Sbjct: 131 GLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPN 190
Query: 338 HVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQ 397
TC+++V + K + A+ +++ G+ + I+ + A G + A +
Sbjct: 191 IFTCNLLVKALCK-KNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVL 249
Query: 398 SEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRR 457
EM +G + +A Y LMD +CK EA + +M+ ++P T+ +++ A +
Sbjct: 250 EEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 309
Query: 458 MQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHS 517
+ N+ EM + P ++ +I A K+ D A + KM K P +
Sbjct: 310 KKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKV-DEACGLWRKMLKNNCMPDNAL 368
Query: 518 YTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMM 577
+ LIH G +A F+ ++ I PS+ TY TL+ G G+ ++W M
Sbjct: 369 LSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMY 427
Query: 578 SEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHS 637
K + T+N+L++G +K G E V+ E +IG P T+ +L + G+
Sbjct: 428 ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEE 487
Query: 638 KLPQLLKEMAALNLKPDSVTYSTMI 662
+++ MA +N K D ++ +
Sbjct: 488 DAMKIVS-MAVMNGKVDKESWELFL 511
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 155/342 (45%), Gaps = 8/342 (2%)
Query: 260 AQEPSLVTPR--ACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCG 317
++E +TP C +L L + + + +PS ++ Y + G + G
Sbjct: 181 SKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARG 240
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
E A +V E M PD T ++++ KLGR + +A + M + ++ +E
Sbjct: 241 DMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFS-EAATVMDDMEKNEIEPNEVTY 299
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
G ++++ C E A + EM ++ ++ + ++DA C+ + V+EA GL+ +M
Sbjct: 300 GVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLK 359
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
N P A + L+H + + L E + G P+ +Y LI+ + ++++
Sbjct: 360 NNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTE 418
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
A + M + KP + +Y LI S +G ++ E M G P+ T+ L
Sbjct: 419 -AGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILF 477
Query: 558 DGFRRAGDTQTMMKIWKL-MMSEKVEGTKVTFNILVDGFAKQ 598
+G ++ G + MKI + +M+ KV+ K ++ + + FA +
Sbjct: 478 EGLQKLGKEEDAMKIVSMAVMNGKVD--KESWELFLKKFAGE 517
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 113/255 (44%), Gaps = 4/255 (1%)
Query: 404 GVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN--VKPTAATFNILMHAYSRRMQPK 461
G N Y++++ ++ + E L +++ +K F L+ Y + +
Sbjct: 78 GFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYE 137
Query: 462 IVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK-VGIKPTSHSYTA 520
+ + D G+K + S L++ + ++ D+ F K+ GI P +
Sbjct: 138 SSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF-DLVHAMFKNSKESFGITPNIFTCNL 196
Query: 521 LIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEK 580
L+ A E AY + + G+ P++ TYTT+L G+ GD ++ ++ + M+
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256
Query: 581 VEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLP 640
T+ +L+DG+ K G++ EA V+ + K + P +TY +++ A + + +
Sbjct: 257 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 316
Query: 641 QLLKEMAALNLKPDS 655
+ EM + PDS
Sbjct: 317 NMFDEMLERSFMPDS 331
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 106/220 (48%), Gaps = 4/220 (1%)
Query: 446 TFNILMHAYSRRMQPKIVENLLAEMQDI--GLKPTANSYTCLISAYGRQKKMSDMAADAF 503
T++ ++ SR VE+L+A++++ +K N + L+ YG + + + F
Sbjct: 85 TYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRY-ESSMRIF 143
Query: 504 LKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE-GIKPSIETYTTLLDGFRR 562
L++ G+K + S L++ + + + F+N + GI P+I T L+ +
Sbjct: 144 LRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCK 203
Query: 563 AGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMT 622
D ++ K+ + S + VT+ ++ G+ +G A+ V+ E G +P T
Sbjct: 204 KNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATT 263
Query: 623 YNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
Y +LM+ Y + G+ S+ ++ +M ++P+ VTY MI
Sbjct: 264 YTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMI 303
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 177/397 (44%), Gaps = 74/397 (18%)
Query: 306 YNAAISGLLCCGRYEDAWKVYE---SMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFF 362
+NA +S C GR D ++ + M++ IRPD VT I++ + K R +A F
Sbjct: 297 FNALLS---CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCK-SRRVDEALEVF 352
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
EKM +G + + G ++K+ ++I +NTL+D CK
Sbjct: 353 EKM--RGKRTDD---GNVIKA------------------------DSIHFNTLIDGLCKV 383
Query: 423 NHVEEAEGLFVEMK-AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
++EAE L V MK + P A T+N L+ Y R + + + +++ M++ +KP +
Sbjct: 384 GRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVT 443
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
++ R + +MA F+ M+K G+K +Y LIHA EKA +E M
Sbjct: 444 VNTIVGGMCRHHGL-NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 542 QREGIKPSIETYTTLLDGF---RRAGDTQTMM---------------------------- 570
G P + Y L+ G RR D ++
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNT 562
Query: 571 -KIWKLMMSEKVEGTK---VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
K+++++ + EG K +T+N L+ F K + ++ + + GL PTV TY +
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 627 MNAYARGGQHSKLPQLLKEMAALN-LKPDSVTYSTMI 662
++AY G+ + +L K+M + + P++V Y+ +I
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILI 659
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 166/359 (46%), Gaps = 4/359 (1%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESME-KDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEK 364
+N I GL GR ++A ++ M+ ++ P+ VT + ++ + G+ + A +
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGK-LETAKEVVSR 431
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
M +K + + IV C ++ A++ +MEK+GV N + Y TL+ A C ++
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
VE+A + +M P A + L+ + + ++ ++++ G +Y
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE 544
LI + K ++ + M+K G KP S +Y LI + E E M+ +
Sbjct: 552 LIGLFC-DKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 545 GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM-MSEKVEGTKVTFNILVDGFAKQGQYME 603
G+ P++ TY ++D + G+ +K++K M + KV V +NIL++ F+K G + +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 604 ARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
A + E + P V TYN L Q L +L+ EM + +P+ +T ++
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 197/450 (43%), Gaps = 51/450 (11%)
Query: 260 AQEPSL-VTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
A+E ++ +T A +L GR GM ++ ++++ L S+ K + + N + LL G
Sbjct: 143 AKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMK--NSQVRNVVVDVLLRNGL 200
Query: 319 YEDAWKVYESM-EKDNI-RPDHVTCSIMVTVMRKLGR--SAKDAWYFFEKMNRKGVKWSE 374
+DA+KV + M +K+++ P+ +T I++ + K GR + + + + GV +
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWK-GRLLTEEKIIALISRFSSHGVSPNS 259
Query: 375 EVLGAIVKSFCAEGLVSRALIIQSE----------------------------------- 399
L + S C + A I S+
Sbjct: 260 VWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLK 319
Query: 400 MEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN------VKPTAATFNILMHA 453
M++ + + + L++ CKS V+EA +F +M+ K +K + FN L+
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 454 YSRRMQPKIVENLLAEMQ-DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIK 512
+ + K E LL M+ + P A +Y CLI Y R K+ + A + +MK+ IK
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKL-ETAKEVVSRMKEDEIK 438
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI 572
P + ++ A V F +M++EG+K ++ TY TL+ + + M
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 573 WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
++ M+ + L+ G + + +A V+ + + G ++ YNML+ +
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 633 GGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
K+ ++L +M KPDS+TY+T+I
Sbjct: 559 KNNTEKVYEMLTDMEKEGKKPDSITYNTLI 588
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 153/337 (45%), Gaps = 40/337 (11%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVM-RKLGRSAKDAWYFFEK 364
YN I G G+ E A +V M++D I+P+ VT + +V M R G + A FF
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM--AVVFFMD 466
Query: 365 MNRKGVK------------------------WSEEVLGA-----------IVKSFCAEGL 389
M ++GVK W E++L A ++ C
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
A+ + ++++ G + + YN L+ FC N+ E+ + +M+ + KP + T+N
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMK-K 508
L+ + + + VE ++ +M++ GL PT +Y +I AY ++ D A F M
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL-DEALKLFKDMGLH 645
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
+ P + Y LI+A+S G +A E M+ + ++P++ETY L +T
Sbjct: 646 SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGET 705
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
++K+ M+ + E ++T IL++ + + ++ R
Sbjct: 706 LLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLR 742
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 169/384 (44%), Gaps = 15/384 (3%)
Query: 324 KVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKS 383
++YE ++ NI V ++++ ++G + +E+++ +K S+ V +V
Sbjct: 138 RLYEIAKEKNIPLTVVATNLLIRWFGRMGM-VNQSVLVYERLD-SNMKNSQ-VRNVVVDV 194
Query: 384 FCAEGLVSRALIIQSEM-EKKGVFS-NAIVYNTLMDAFCKSNHVEEAE--GLFVEMKAKN 439
GLV A + EM +K+ VF N I + ++ K + E + L +
Sbjct: 195 LLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHG 254
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
V P + + + + + ++L+++ A + L+S GR +S M
Sbjct: 255 VSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMN 314
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ----REG--IKPSIETY 553
D LKM +V I+P + LI+ S ++A FE M+ +G IK +
Sbjct: 315 -DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHF 373
Query: 554 TTLLDGFRRAGDTQTMMKIW-KLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFG 612
TL+DG + G + ++ ++ + E+ VT+N L+DG+ + G+ A++V+S
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 613 KIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXX 672
+ + P V+T N ++ R + +M +K + VTY T+I+
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 673 XXXXYHKQMIKSGQVMDVDSYQKL 696
++++M+++G D Y L
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYAL 517
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 28/237 (11%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYE---SMEKDNIRPDHVTCSIMVTVMRKLGRSAKDA 358
D+ YN I GL C + KVYE MEK+ +PD +T + +++ K + +
Sbjct: 545 DLLAYNMLI-GLFC--DKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGK-HKDFESV 600
Query: 359 WYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEME-KKGVFSNAIVYNTLMD 417
E+M G+ + GA++ ++C+ G + AL + +M V N ++YN L++
Sbjct: 601 ERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILIN 660
Query: 418 AFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKP 477
AF K + +A L EMK K V+P T+N L + + Q + + L+ EM + +P
Sbjct: 661 AFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEP 720
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKA 534
+ L+ +++S +D +K++K + YSV+ EKA
Sbjct: 721 NQITMEILM------ERLS--GSDELVKLRK------------FMQGYSVASPTEKA 757
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 179/406 (44%), Gaps = 59/406 (14%)
Query: 306 YNAAISGLLCCGRYEDAWKVYE---SMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFF 362
+NA +S C GR D ++ + M++ IRPD VT I++ + K R +A F
Sbjct: 297 FNALLS---CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCK-SRRVDEALEVF 352
Query: 363 EKMNRKG------VKWSEEVLGAIVKSFCAEGLVSRA--LIIQSEMEKKGVFSNAIVYNT 414
E+M K +K ++ C G + A L+++ ++E++ V NA+ YN
Sbjct: 353 EQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCV-PNAVTYNC 411
Query: 415 LMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIG 474
L+D +C++ +E A+ + MK +KP T N ++ R + +M+ G
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 475 LK-----------------------------------PTANSYTCLISAYGRQKKMSDMA 499
+K P A Y LIS + ++ D A
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD-A 530
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
K+K+ G +Y LI + EK Y +M++EG KP TY TL+
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 560 FRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH-- 617
F + D +++ ++ + M + ++ T T+ ++D + G+ EA + F +GLH
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA---LKLFKDMGLHSK 647
Query: 618 --PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
P + YN+L+NA+++ G + L +EM ++P+ TY+ +
Sbjct: 648 VNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 160/346 (46%), Gaps = 8/346 (2%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESME-KDNIRPDHVTCSIMVTVMRKLGR--SAKDAWYFF 362
+N I GL GR ++A ++ M+ ++ P+ VT + ++ + G+ +AK+
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV---V 429
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
+M +K + + IV C ++ A++ +MEK+GV N + Y TL+ A C
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY 482
++VE+A + +M P A + L+ + + ++ ++++ G +Y
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAY 549
Query: 483 TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ 542
LI + K ++ + M+K G KP S +Y LI + E E M+
Sbjct: 550 NMLIGLFC-DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 543 REGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM-MSEKVEGTKVTFNILVDGFAKQGQY 601
+G+ P++ TY ++D + G+ +K++K M + KV V +NIL++ F+K G +
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF 668
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMA 647
+A + E + P V TYN L Q L +L+ EM
Sbjct: 669 GQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 196/449 (43%), Gaps = 49/449 (10%)
Query: 260 AQEPSL-VTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
A+E ++ +T A +L GR GM ++ ++++ L S+ K + + N + LL G
Sbjct: 143 AKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMK--NSQVRNVVVDVLLRNGL 200
Query: 319 YEDAWKVYESM-EKDNIRP-DHVTCSIMV-TVMRKLGRSAKDAWYFFEKMNRKGVKWSEE 375
+DA+KV + M +K+++ P + +T I++ V ++ + + + + GV +
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 376 VLGAIVKSFCAEGLVSRALIIQSE-----------------------------------M 400
L + S C + A I S+ M
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 401 EKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN------VKPTAATFNILMHAY 454
++ + + + L++ CKS V+EA +F +M+ K +K + FN L+
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 455 SRRMQPKIVENLLAEMQ-DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKP 513
+ + K E LL M+ + P A +Y CLI Y R K+ + A + +MK+ IKP
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKL-ETAKEVVSRMKEDEIKP 439
Query: 514 TSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIW 573
+ ++ A V F +M++EG+K ++ TY TL+ + + M +
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 574 KLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARG 633
+ M+ + L+ G + + +A V+ + + G ++ YNML+ +
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK 559
Query: 634 GQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
K+ ++L +M KPDS+TY+T+I
Sbjct: 560 NNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 141/314 (44%), Gaps = 44/314 (14%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVM-RKLGRSAKDAWYFFEK 364
YN I G G+ E A +V M++D I+P+ VT + +V M R G + A FF
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM--AVVFFMD 466
Query: 365 MNRKGVK------------------------WSEEVLGA-----------IVKSFCAEGL 389
M ++GVK W E++L A ++ C
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
A+ + ++++ G + + YN L+ FC N+ E+ + +M+ + KP + T+N
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMK-K 508
L+ + + + VE ++ +M++ GL PT +Y +I AY ++ D A F M
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL-DEALKLFKDMGLH 645
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
+ P + Y LI+A+S G +A E M+ + ++P++ETY L +T
Sbjct: 646 SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGET 705
Query: 569 MMKIWKLMMSEKVE 582
++K +M E VE
Sbjct: 706 LLK----LMDEMVE 715
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 168/384 (43%), Gaps = 15/384 (3%)
Query: 324 KVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKS 383
++YE ++ NI V +++ ++G + +E+++ +K S+ V +V
Sbjct: 138 RLYEIAKEKNIPLTIVATKLLIRWFGRMG-MVNQSVLVYERLD-SNMKNSQ-VRNVVVDV 194
Query: 384 FCAEGLVSRALIIQSEM-EKKGVFS-NAIVYNTLMDAFCKSNHVEEAE--GLFVEMKAKN 439
GLV A + EM +K+ VF N I + ++ K + E + L +
Sbjct: 195 LLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHG 254
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
V P + + + + + ++L+++ A + L+S GR +S M
Sbjct: 255 VSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMN 314
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ----REG--IKPSIETY 553
D LKM +V I+P + LI+ S ++A FE M+ +G IK +
Sbjct: 315 -DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 554 TTLLDGFRRAGDTQTMMKIW-KLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFG 612
TL+DG + G + ++ ++ + E+ VT+N L+DG+ + G+ A++V+S
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 613 KIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXX 672
+ + P V+T N ++ R + +M +K + VTY T+I+
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 673 XXXXYHKQMIKSGQVMDVDSYQKL 696
++++M+++G D Y L
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYAL 517
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 154/353 (43%), Gaps = 2/353 (0%)
Query: 311 SGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGV 370
+G L R+EDA+ ++ M P V + ++T L R + YF +KM G+
Sbjct: 44 TGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANL-RRYETVIYFSQKMELYGI 102
Query: 371 KWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEG 430
++ FC +S AL + +M K G + + + +L+ FC N + +A
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 431 LFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYG 490
L + M +P +N L+ + + I LL EM+ GL +Y L++
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 491 RQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSI 550
+ SD AA M K I P ++TALI + G ++A ++ M + + P+
Sbjct: 223 YSGRWSD-AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE 610
TY ++++G G K + LM S+ VT+N L+ GF K E +
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 611 FGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
G + + TYN L++ Y + G+ + M + + PD +T+ +++
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 156/361 (43%), Gaps = 2/361 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D++ + I C R A V M K P VT ++ + R DA+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIG-DAFSL 163
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
M + G + + V ++ C G ++ AL + +EMEKKG+ ++ + YNTL+ C
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
S +A + +M +++ P TF L+ + ++ + L EM + P +
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y +I+ ++ D A F M G P +Y LI + ++ F+ M
Sbjct: 284 YNSIINGLCMHGRLYD-AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
EG I TY TL+ G+ + G + + I+ M+S +V +T IL+ G G+
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
A + + + ++ YN++++ + + K +L + +KPD+ TY+ M
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Query: 662 I 662
I
Sbjct: 463 I 463
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 155/358 (43%), Gaps = 11/358 (3%)
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
EPS+VT + F L+ R G L++L + S +V +YN I GL G
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVIL---MVKSGYEPNVVVYNTLIDGLCKNGELNI 194
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIV 381
A ++ MEK + D VT + ++T + GR + DA M ++ + A++
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS-DAARMLRDMMKRSINPDVVTFTALI 253
Query: 382 KSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK 441
F +G + A + EM + V N + YN++++ C + +A+ F M +K
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
P T+N L+ + + L M G +Y LI Y + K+ +A D
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR-VALD 372
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFR 561
F M + P ++ L+H V+G E A V F++M+ I Y ++ G
Sbjct: 373 IFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC 432
Query: 562 RAGDTQTMMKIWKLMMSEKVEGTK---VTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
+A + K W+L VEG K T+ I++ G K G EA ++I + G+
Sbjct: 433 KADKVE---KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 123/248 (49%), Gaps = 1/248 (0%)
Query: 415 LMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIG 474
L F S E+A LF EM P+ F L+ A + + + V +M+ G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 475 LKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKA 534
+ S+T LI + R ++S A KM K+G +P+ ++ +L+H + + A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLS-FALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 535 YVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDG 594
+ M + G +P++ Y TL+DG + G+ +++ M + + VT+N L+ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
G++ +A ++ + K ++P V+T+ L++ + + G + +L KEM ++ P+
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 655 SVTYSTMI 662
+VTY+++I
Sbjct: 281 NVTYNSII 288
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 167/336 (49%), Gaps = 11/336 (3%)
Query: 331 KDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLV 390
K NIR T +++ + K G A FE M GV + +LG +V SF +G +
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLH-DLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 391 --SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVE-MKAKNVKPTAATF 447
+ AL++QS E +G +V N+L++ K + VE+A LF E ++ ++ T TF
Sbjct: 155 HFATALLLQS-FEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTK-TF 209
Query: 448 NILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMK 507
NIL+ + + LL M G +P +Y LI + + +++ A++ F +K
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK-ASEMFKDVK 268
Query: 508 KVGI-KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
+ P +YT++I Y +G +A ++M R GI P+ T+ L+DG+ +AG+
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
T +I M+S VTF L+DG+ + GQ + + E G+ P TY++L
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 627 MNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+NA + K +LL ++A+ ++ P Y+ +I
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 177/419 (42%), Gaps = 37/419 (8%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGR------------ 353
YN L G ++ A +++E M+ D + P++ +V+ + G+
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 354 --------------------SAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRA 393
+DA F++ R + +++ C G +A
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKA 225
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV-KPTAATFNILMH 452
L + M G + + YNTL+ FCKSN + +A +F ++K+ +V P T+ ++
Sbjct: 226 LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMIS 285
Query: 453 AYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIK 512
Y + + + +LL +M +G+ PT ++ L+ Y + +M A + KM G
Sbjct: 286 GYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT-AEEIRGKMISFGCF 344
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI 572
P ++T+LI Y G + + +E M G+ P+ TY+ L++ ++
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 573 WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
+ S+ + +N ++DGF K G+ EA ++ E K P +T+ +L+ +
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 633 GGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYH-KQMIKSGQVMDV 690
G+ + + +M A+ PD +T S+++ YH Q+ + GQ +V
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLL--SCLLKAGMAKEAYHLNQIARKGQSNNV 521
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 164/353 (46%), Gaps = 6/353 (1%)
Query: 305 IYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEK 364
+ N+ ++ L+ R EDA K+++ + D T +I++ + +G++ K A
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK-ALELLGV 231
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFS-NAIVYNTLMDAFCKSN 423
M+ G + +++ FC +++A + +++ V S + + Y +++ +CK+
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 424 HVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYT 483
+ EA L +M + PT TFN+L+ Y++ + E + +M G P ++T
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 484 CLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQR 543
LI Y R ++S + +M G+ P + +Y+ LI+A KA +
Sbjct: 352 SLIDGYCRVGQVSQ-GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 544 EGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYME 603
+ I P Y ++DGF +AG I + M +K + K+TF IL+ G +G+ E
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 604 ARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSK---LPQLLKEMAALNLKP 653
A + + IG P +T + L++ + G + L Q+ ++ + N+ P
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 109/234 (46%), Gaps = 2/234 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV Y + ISG G+ +A + + M + I P +VT +++V K G A
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT-AEEI 334
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
KM G +++ +C G VS+ + EM +G+F NA Y+ L++A C
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
N + +A L ++ +K++ P +N ++ + + + ++ EM+ KP +
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
+T LI + + +M + A F KM +G P + ++L+ +G ++AY
Sbjct: 455 FTILIIGHCMKGRMFE-AVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 167/336 (49%), Gaps = 11/336 (3%)
Query: 331 KDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLV 390
K NIR T +++ + K G A FE M GV + +LG +V SF +G +
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLH-DLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 391 --SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVE-MKAKNVKPTAATF 447
+ AL++QS E +G +V N+L++ K + VE+A LF E ++ ++ T TF
Sbjct: 155 HFATALLLQS-FEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTK-TF 209
Query: 448 NILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMK 507
NIL+ + + LL M G +P +Y LI + + +++ A++ F +K
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK-ASEMFKDVK 268
Query: 508 KVGI-KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
+ P +YT++I Y +G +A ++M R GI P+ T+ L+DG+ +AG+
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
T +I M+S VTF L+DG+ + GQ + + E G+ P TY++L
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 627 MNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+NA + K +LL ++A+ ++ P Y+ +I
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 177/419 (42%), Gaps = 37/419 (8%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGR------------ 353
YN L G ++ A +++E M+ D + P++ +V+ + G+
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 354 --------------------SAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRA 393
+DA F++ R + +++ C G +A
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKA 225
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV-KPTAATFNILMH 452
L + M G + + YNTL+ FCKSN + +A +F ++K+ +V P T+ ++
Sbjct: 226 LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMIS 285
Query: 453 AYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIK 512
Y + + + +LL +M +G+ PT ++ L+ Y + +M A + KM G
Sbjct: 286 GYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT-AEEIRGKMISFGCF 344
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI 572
P ++T+LI Y G + + +E M G+ P+ TY+ L++ ++
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 573 WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
+ S+ + +N ++DGF K G+ EA ++ E K P +T+ +L+ +
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 633 GGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYH-KQMIKSGQVMDV 690
G+ + + +M A+ PD +T S+++ YH Q+ + GQ +V
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLL--SCLLKAGMAKEAYHLNQIARKGQSNNV 521
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 164/353 (46%), Gaps = 6/353 (1%)
Query: 305 IYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEK 364
+ N+ ++ L+ R EDA K+++ + D T +I++ + +G++ K A
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK-ALELLGV 231
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFS-NAIVYNTLMDAFCKSN 423
M+ G + +++ FC +++A + +++ V S + + Y +++ +CK+
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 424 HVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYT 483
+ EA L +M + PT TFN+L+ Y++ + E + +M G P ++T
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 484 CLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQR 543
LI Y R ++S + +M G+ P + +Y+ LI+A KA +
Sbjct: 352 SLIDGYCRVGQVSQ-GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 544 EGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYME 603
+ I P Y ++DGF +AG I + M +K + K+TF IL+ G +G+ E
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 604 ARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSK---LPQLLKEMAALNLKP 653
A + + IG P +T + L++ + G + L Q+ ++ + N+ P
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 109/234 (46%), Gaps = 2/234 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV Y + ISG G+ +A + + M + I P +VT +++V K G A
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT-AEEI 334
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
KM G +++ +C G VS+ + EM +G+F NA Y+ L++A C
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
N + +A L ++ +K++ P +N ++ + + + ++ EM+ KP +
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
+T LI + + +M + A F KM +G P + ++L+ +G ++AY
Sbjct: 455 FTILIIGHCMKGRMFE-AVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 175/392 (44%), Gaps = 37/392 (9%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ YN + L + E A +V+E M+K + R D T +IM+ M ++G+ +A
Sbjct: 237 DIFAYNMLLDAL---AKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGK-CDEAVGL 292
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMD---- 417
F +M +G+ + +++ +V +A+ + S M + G N Y+ L++
Sbjct: 293 FNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVA 352
Query: 418 ----------------------------AFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
K HV EA LF +M + VK ++
Sbjct: 353 EGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMS 412
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
++ + + +L+++ + G+ Y + SA G+ K++S + D F KMKK
Sbjct: 413 MLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIH-DLFEKMKKD 471
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
G P +Y LI ++ G ++A FE ++R KP I +Y +L++ + GD
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
+K M + + VT++ L++ F K + A + E G P ++TYN+L++
Sbjct: 532 HVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDC 591
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
+ G+ ++ L +M L PDS+TY+ +
Sbjct: 592 LEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 153/352 (43%), Gaps = 34/352 (9%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T++ +GR G D+ + LF + + +V YN + L + A +V+ M +
Sbjct: 274 TIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVE 333
Query: 332 DNIRPDHVTCSI--------------------------------MVTVMRKLGRSAKDAW 359
RP+ T S+ +V + KLG +A
Sbjct: 334 TGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGH-VSEAH 392
Query: 360 YFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAF 419
F M VK + ++++S C G A+ + S++ +KGV ++ ++YNT+ A
Sbjct: 393 RLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSAL 452
Query: 420 CKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTA 479
K + LF +MK P T+NIL+ ++ R + N+ E++ KP
Sbjct: 453 GKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDI 512
Query: 480 NSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
SY LI+ G+ + D A F +M++ G+ P +Y+ L+ + + E AY FE
Sbjct: 513 ISYNSLINCLGKNGDV-DEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFE 571
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
M +G +P+I TY LLD + G T + ++ M + + +T+ +L
Sbjct: 572 EMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 168/411 (40%), Gaps = 40/411 (9%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
R++ + +SM K N+ + T +I++ + +D + + +K +
Sbjct: 151 RFDRVRSILDSMVKSNVHGNISTVNILIGFFG----NTEDLQMCLRLVKKWDLKMNSFTY 206
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
+++++ S+A + E+ + G + YN L+DA K E+A +F +MK
Sbjct: 207 KCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKK 263
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
++ + T+ I++ R + L EM GL Y L+ + KM D
Sbjct: 264 RHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAK-GKMVD 322
Query: 498 MAADAFLKMKKVGIKPTSHSYTAL---------------------------IHAYSVS-- 528
A F +M + G +P ++Y+ L I++Y V
Sbjct: 323 KAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTL 382
Query: 529 ---GWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK 585
G +A+ F +M +K ++Y ++L+ AG T +++ + + V
Sbjct: 383 SKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDT 442
Query: 586 VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 645
+ +N + K Q D+ + K G P + TYN+L+ ++ R G+ + + +E
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEE 502
Query: 646 MAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+ + KPD ++Y+++I K+M + G DV +Y L
Sbjct: 503 LERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 111/235 (47%), Gaps = 4/235 (1%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
Y + + L G+ +A ++ + + + D + + + + + KL + FEKM
Sbjct: 410 YMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKL-KQISHIHDLFEKM 468
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
+ G ++ SF G V A+ I E+E+ + I YN+L++ K+ V
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
+EA F EM+ K + P T++ LM + + + ++ +L EM G +P +Y L
Sbjct: 529 DEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNIL 588
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
+ + + ++ A D + KMK+ G+ P S +YT L SVS H K+ + +N
Sbjct: 589 LDCLEKNGRTAE-AVDLYSKMKQQGLTPDSITYTVLERLQSVS--HGKSRIRRKN 640
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 41/215 (19%)
Query: 238 VLEVLGKERLLVCCLYFFQWMRAQEPSLVTPRACT--VLFPLLGRAGMGDKLMVLFRNLP 295
V LGK + + F+ M+ PS P T +L GR G D+ + +F L
Sbjct: 448 VFSALGKLKQISHIHDLFEKMKKDGPS---PDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 296 SSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSA 355
S D+ YN+ I+ L G ++A ++ M++ + PD VT S T+M G++
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYS---TLMECFGKTE 561
Query: 356 KDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
+ V A + EM KG N + YN L
Sbjct: 562 R---------------------------------VEMAYSLFEEMLVKGCQPNIVTYNIL 588
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
+D K+ EA L+ +MK + + P + T+ +L
Sbjct: 589 LDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 12/166 (7%)
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI---WKLMMSEKVEGTKVTFNILVDG 594
++M + + +I T L+ F D Q +++ W L M+ T+ L+
Sbjct: 159 LDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNS------FTYKCLLQA 212
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
+ + Y +A DV E + G + YNML++A A+ K Q+ ++M + + D
Sbjct: 213 YLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK---DEKACQVFEDMKKRHCRRD 269
Query: 655 SVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKLRAIL 700
TY+ MI +MI G ++V Y L +L
Sbjct: 270 EYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVL 315
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 177/397 (44%), Gaps = 74/397 (18%)
Query: 306 YNAAISGLLCCGRYEDAWKVYE---SMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFF 362
+NA +S C GR D ++ + M++ IRPD VT I++ + K R +A F
Sbjct: 297 FNALLS---CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCK-SRRVDEALEVF 352
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
E+M +G + + G ++K+ ++I +NTL+D CK
Sbjct: 353 EQM--RGKRTDD---GNVIKA------------------------DSIHFNTLIDGLCKV 383
Query: 423 NHVEEAEGLFVEMK-AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
++EAE L V MK + P A T+N L+ Y R + + + +++ M++ +KP +
Sbjct: 384 GRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVT 443
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
++ R + +MA F+ M+K G+K +Y LIHA EKA +E M
Sbjct: 444 VNTIVGGMCRHHGL-NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 542 QREGIKPSIETYTTLLDGF---RRAGDTQTMM---------------------------- 570
G P + Y L+ G RR D ++
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNA 562
Query: 571 -KIWKLMMSEKVEGTK---VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
K+++++ + EG K +T+N L+ F K + ++ + + GL PTV TY +
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 627 MNAYARGGQHSKLPQLLKEMAALN-LKPDSVTYSTMI 662
++AY G+ + +L K+M + + P++V Y+ +I
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILI 659
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 166/359 (46%), Gaps = 4/359 (1%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESME-KDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEK 364
+N I GL GR ++A ++ M+ ++ P+ VT + ++ + G+ + A +
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGK-LETAKEVVSR 431
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
M +K + + IV C ++ A++ +MEK+GV N + Y TL+ A C ++
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
VE+A + +M P A + L+ + + ++ ++++ G +Y
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE 544
LI + K ++ + M+K G KP S +Y LI + E E M+ +
Sbjct: 552 LIGLFC-DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 545 GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM-MSEKVEGTKVTFNILVDGFAKQGQYME 603
G+ P++ TY ++D + G+ +K++K M + KV V +NIL++ F+K G + +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 604 ARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
A + E + P V TYN L Q L +L+ EM + +P+ +T ++
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 196/449 (43%), Gaps = 49/449 (10%)
Query: 260 AQEPSL-VTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
A+E ++ +T A +L GR GM ++ ++++ L S+ K + + N + LL G
Sbjct: 143 AKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMK--NSQVRNVVVDVLLRNGL 200
Query: 319 YEDAWKVYESM-EKDNI-RPDHVTCSIMV-TVMRKLGRSAKDAWYFFEKMNRKGVKWSEE 375
+DA+KV + M +K+++ P+ +T I++ V ++ + + + + GV +
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 376 VLGAIVKSFCAEGLVSRALIIQSE-----------------------------------M 400
L + S C + A I S+ M
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 401 EKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN------VKPTAATFNILMHAY 454
++ + + + L++ CKS V+EA +F +M+ K +K + FN L+
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 455 SRRMQPKIVENLLAEMQ-DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKP 513
+ + K E LL M+ + P A +Y CLI Y R K+ + A + +MK+ IKP
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKL-ETAKEVVSRMKEDEIKP 439
Query: 514 TSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIW 573
+ ++ A V F +M++EG+K ++ TY TL+ + + M +
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 574 KLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARG 633
+ M+ + L+ G + + +A V+ + + G ++ YNML+ +
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK 559
Query: 634 GQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
K+ ++L +M KPDS+TY+T+I
Sbjct: 560 NNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 153/337 (45%), Gaps = 40/337 (11%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVM-RKLGRSAKDAWYFFEK 364
YN I G G+ E A +V M++D I+P+ VT + +V M R G + A FF
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM--AVVFFMD 466
Query: 365 MNRKGVK------------------------WSEEVLGA-----------IVKSFCAEGL 389
M ++GVK W E++L A ++ C
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
A+ + ++++ G + + YN L+ FC N+ E+ + +M+ + KP + T+N
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMK-K 508
L+ + + + VE ++ +M++ GL PT +Y +I AY ++ D A F M
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL-DEALKLFKDMGLH 645
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
+ P + Y LI+A+S G +A E M+ + ++P++ETY L +T
Sbjct: 646 SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGET 705
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
++K+ M+ + E ++T IL++ + + ++ R
Sbjct: 706 LLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLR 742
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 168/384 (43%), Gaps = 15/384 (3%)
Query: 324 KVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKS 383
++YE ++ NI V +++ ++G + +E+++ +K S+ V +V
Sbjct: 138 RLYEIAKEKNIPLTIVATKLLIRWFGRMGM-VNQSVLVYERLD-SNMKNSQ-VRNVVVDV 194
Query: 384 FCAEGLVSRALIIQSEM-EKKGVFS-NAIVYNTLMDAFCKSNHVEEAE--GLFVEMKAKN 439
GLV A + EM +K+ VF N I + ++ K + E + L +
Sbjct: 195 LLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHG 254
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
V P + + + + + ++L+++ A + L+S GR +S M
Sbjct: 255 VSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMN 314
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ----REG--IKPSIETY 553
D LKM +V I+P + LI+ S ++A FE M+ +G IK +
Sbjct: 315 -DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 554 TTLLDGFRRAGDTQTMMKIW-KLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFG 612
TL+DG + G + ++ ++ + E+ VT+N L+DG+ + G+ A++V+S
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 613 KIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXX 672
+ + P V+T N ++ R + +M +K + VTY T+I+
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 673 XXXXYHKQMIKSGQVMDVDSYQKL 696
++++M+++G D Y L
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYAL 517
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 28/237 (11%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYE---SMEKDNIRPDHVTCSIMVTVMRKLGRSAKDA 358
D+ YN I GL C +A KVYE MEK+ +PD +T + +++ K + +
Sbjct: 545 DLLAYNMLI-GLFC--DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK-HKDFESV 600
Query: 359 WYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEME-KKGVFSNAIVYNTLMD 417
E+M G+ + GA++ ++C+ G + AL + +M V N ++YN L++
Sbjct: 601 ERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILIN 660
Query: 418 AFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKP 477
AF K + +A L EMK K V+P T+N L + + Q + + L+ EM + +P
Sbjct: 661 AFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEP 720
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKA 534
+ L+ +++S +D +K++K + YSV+ EKA
Sbjct: 721 NQITMEILM------ERLS--GSDELVKLRK------------FMQGYSVASPTEKA 757
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 157/318 (49%), Gaps = 6/318 (1%)
Query: 329 MEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEG 388
M + RPD VT + ++ + GR + A ++M +G + G I+ C G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQ-ALALVDRMVEEG----HQPYGTIINGLCKMG 55
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
AL + S+ME+ + ++ ++YN ++D CK H A+ LF EM K + P T++
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK 508
++ ++ R + E LL +M + + P +++ LI+A ++ K+S+ A + + M +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSE-AEEIYGDMLR 174
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
GI PT+ +Y ++I + A ++M + P + T++TL++G+ +A
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMN 628
M+I+ M + VT+ L+ GF + G A+D+++ G+ P +T+ ++
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Query: 629 AYARGGQHSKLPQLLKEM 646
+ + K +L+++
Sbjct: 295 SLCSKKELRKAFAILEDL 312
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 144/312 (46%), Gaps = 6/312 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV + ++GL C GR A + + M ++ +P ++ + K+G + + A
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDT-ESALNL 63
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
KM +K + AI+ C +G A + +EM KG+F + I Y+ ++D+FC+
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
S +AE L +M + + P TF+ L++A + + E + +M G+ PT +
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y +I + +Q +++D A M P +++ LI+ Y + + F M
Sbjct: 184 YNSMIDGFCKQDRLND-AKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
R GI + TYTTL+ GF + GD + +M+S V +TF ++ + +
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Query: 602 MEARDVISEFGK 613
+A ++ + K
Sbjct: 303 RKAFAILEDLQK 314
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 132/301 (43%), Gaps = 5/301 (1%)
Query: 400 MEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQ 459
M + G + + + TLM+ C V +A L M + +P + +++ +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 460 PKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYT 519
+ NLL++M++ +K Y +I + A + F +M GI P +Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIH-AQNLFTEMHDKGIFPDVITYS 115
Query: 520 ALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE 579
+I ++ SG A +M I P + T++ L++ + G +I+ M+
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 580 KVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKL 639
+ T +T+N ++DGF KQ + +A+ ++ P V+T++ L+N Y + +
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 640 PQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKLRAI 699
++ EM + ++VTY+T+I+ MI SG + ++Q + A
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Query: 700 L 700
L
Sbjct: 296 L 296
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 107/254 (42%), Gaps = 37/254 (14%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
LF + F DV Y+ I GR+ DA ++ M + I PD VT S ++ +
Sbjct: 98 LFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALV 157
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
K G+ V +EE+ G +M ++G+F
Sbjct: 158 KEGK----------------VSEAEEIYG--------------------DMLRRGIFPTT 181
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
I YN+++D FCK + + +A+ + M +K+ P TF+ L++ Y + + + E
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241
Query: 470 MQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG 529
M G+ +YT LI + + + D A D M G+ P ++ +++ +
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDL-DAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300
Query: 530 WHEKAYVAFENMQR 543
KA+ E++Q+
Sbjct: 301 ELRKAFAILEDLQK 314
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 170/347 (48%), Gaps = 3/347 (0%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
R+E A +V+E + + +V + + VM + + A F++M +G + EV
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKK-GVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
A+V ++ G A + M+ + Y+ L+ +F + ++ + L +M+
Sbjct: 189 TALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR 248
Query: 437 AKNVKPTAATFNILMHAYSR-RMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
+ ++P T+N L+ AY + +M ++ L+ + + KP + + + A+G ++
Sbjct: 249 RQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQI 308
Query: 496 SDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTT 555
+M + + K + GI+P ++ L+ +Y SG ++K E MQ+ +I TY
Sbjct: 309 -EMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNV 367
Query: 556 LLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIG 615
++D F RAGD + M +++LM SE++ + VT LV + + + + V+
Sbjct: 368 VIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSD 427
Query: 616 LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ ++ +N L++AY R + +++ +L+ M KPD +TY TM+
Sbjct: 428 IRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMV 474
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 162/371 (43%), Gaps = 39/371 (10%)
Query: 274 LFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKD- 332
L +LG+ +K LF+ + + + +Y A +S GR++ A+ + E M+
Sbjct: 156 LIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSH 215
Query: 333 NIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSR 392
N +PD T SI++ KSF +
Sbjct: 216 NCQPDVHTYSILI------------------------------------KSFLQVFAFDK 239
Query: 393 ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN-VKPTAATFNILM 451
+ S+M ++G+ N I YNTL+DA+ K+ E E ++M ++ KP + T N +
Sbjct: 240 VQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTL 299
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI 511
A+ Q +++EN + Q G++P ++ L+ +YG+ M+A M+K
Sbjct: 300 RAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSA-VMEYMQKYHY 358
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMK 571
T +Y +I A+ +G ++ F MQ E I PS T +L+ + RA +
Sbjct: 359 SWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGG 418
Query: 572 IWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYA 631
+ + + + + V FN LVD + + ++ E + V+ K G P +TY ++ AY
Sbjct: 419 VLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYR 478
Query: 632 RGGQHSKLPQL 642
G + + +L
Sbjct: 479 ISGMTTHVKEL 489
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 164/350 (46%), Gaps = 10/350 (2%)
Query: 319 YEDAWKVYESMEKDNIRPDHVTCSIMVTV---MRKLGRSAKDAWYFFEKMNRKGVKWSEE 375
+E A+ Y M + + + V+ S ++ MRK G A+ M ++G ++
Sbjct: 88 HELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGF----AFGVLALMLKRGFAFNVY 143
Query: 376 VLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM 435
++K C +A+ + EM + + + YNT++ FC+ +E+A L EM
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203
Query: 436 KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
K + T+ IL+ A+ + + L EM+ +GL+ YT LI + ++
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263
Query: 496 SDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTT 555
D F ++ + G P + +Y LI + G ++A FE M G++P++ TYT
Sbjct: 264 -DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 556 LLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIG 615
L+DG G T+ +++ LM+ + E VT+NI+++ K G +A +++ K
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 616 LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN--LKPDSVTYSTMIY 663
P +TYN+L+ G + +LL M + PD ++Y+ +I+
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 186/449 (41%), Gaps = 41/449 (9%)
Query: 286 KLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR-YEDAWKVYESMEKDNIRPDHVTCSIM 344
K + L R + + DV YN I G C G+ E A ++ M+ VT I+
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGF-CEGKELEKALELANEMKGSGCSWSLVTWGIL 218
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ K G+ +A F ++M G++ V ++++ FC G + R + E+ ++G
Sbjct: 219 IDAFCKAGK-MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
AI YNTL+ FCK ++EA +F M + V+P T+ L+ + K
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
LL M + +P A +Y +I+ + ++D A + MKK +P + +Y L+
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD-AVEIVELMKKRRTRPDNITYNILLGG 396
Query: 525 YSVSGWHEKAYVAFENMQREG--IKPSIETYTTLLDGF---------------------- 560
G ++A M ++ P + +Y L+ G
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 561 -------------RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDV 607
+AGD M++WK + K+ T+ ++DGF K G A+ +
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516
Query: 608 ISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXX 667
+ + L P+V YN L+++ + G + +L +EM N PD V+++ MI
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576
Query: 668 XXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
M ++G D+ +Y KL
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 179/416 (43%), Gaps = 6/416 (1%)
Query: 273 VLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKD 332
+L +AG D+ M + + D+ +Y + I G CG + +++ + +
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 333 NIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSR 392
P +T + ++ KLG+ K+A FE M +GV+ + ++ C G
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQ-LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 393 ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMH 452
AL + + M +K NA+ YN +++ CK V +A + MK + +P T+NIL+
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395
Query: 453 AYSRRMQPKIVENLLAEM-QDIG-LKPTANSYTCLISAYGRQKKMSDMAADAF-LKMKKV 509
+ LL M +D P SY LI ++ ++ A D + L ++K+
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH-QALDIYDLLVEKL 454
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
G + L+++ +G KA ++ + I + +TYT ++DGF + G
Sbjct: 455 GAGDRVTT-NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
+ M +++ + +N L+ K+G +A + E + P V+++N++++
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSG 685
+ G LL M+ L PD TYS +I + +M+ SG
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 155/355 (43%), Gaps = 10/355 (2%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
YN I G G+ ++A +++E M + +RP+ T + ++ + +G++ K+A M
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT-KEALQLLNLM 343
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
K + + I+ C +GLV+ A+ I M+K+ + I YN L+ C +
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 426 EEAEGLFVEM--KAKNVKPTAATFNILMHAY---SRRMQPKIVENLLAEMQDIGLKPTAN 480
+EA L M + P ++N L+H +R Q + +LL E G + T N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
G K A + + ++ I S +YTA+I + +G A
Sbjct: 464 ILLNSTLKAGDVNK----AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
M+ ++PS+ Y LL + G ++++ M + V+FNI++DG K G
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDS 655
A ++ + GL P + TY+ L+N + + G + +M +PD+
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 148/320 (46%), Gaps = 5/320 (1%)
Query: 346 TVMRKLGRSAKD--AWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKK 403
+M KL RS A+ F+ KM + L +++ + A + + M K+
Sbjct: 77 NLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKR 136
Query: 404 GVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIV 463
G N +N L+ C++ +A L EM+ ++ P ++N ++ + + +
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 464 ENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLK-MKKVGIKPTSHSYTALI 522
L EM+ G + ++ LI A+ + KM + A FLK MK +G++ YT+LI
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE--AMGFLKEMKFMGLEADLVVYTSLI 254
Query: 523 HAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVE 582
+ G ++ F+ + G P TY TL+ GF + G + +I++ M+ V
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 583 GTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQL 642
T+ L+DG G+ EA +++ + P +TYN+++N + G + ++
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 643 LKEMAALNLKPDSVTYSTMI 662
++ M +PD++TY+ ++
Sbjct: 375 VELMKKRRTRPDNITYNILL 394
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 170/379 (44%), Gaps = 15/379 (3%)
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEV 376
G D+ V+E + ++P C++++ + K R W F+KM + GV + V
Sbjct: 147 GMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVK-QRLTDTVWKIFKKMVKLGVVANIHV 205
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
+V + G +A + SEME+KGVF + YNTL+ +CK + EA + M+
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRME 265
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN--SYTCLISAYGRQKK 494
V P T+N +H +SR + + L E++D TAN +YT LI Y R
Sbjct: 266 RSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD---DVTANHVTYTTLIDGYCR--- 319
Query: 495 MSDMAADAFLKMKKV----GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSI 550
M+D+ D L++++V G P +Y +++ G +A M + I+P
Sbjct: 320 MNDI--DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDN 377
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE 610
T TL++ + + D + +K+ K M+ ++ ++ L+ GF K + A++ +
Sbjct: 378 ITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFS 437
Query: 611 FGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXX 670
+ G P TY+ L++ + + ++ +LL+E L D Y +I
Sbjct: 438 MIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQ 497
Query: 671 XXXXXXYHKQMIKSGQVMD 689
+ M K G V D
Sbjct: 498 VDYAKVLFESMEKKGLVGD 516
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 167/397 (42%), Gaps = 42/397 (10%)
Query: 269 RACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYES 328
+ACTVL L + + D + +F+ + ++H+YN + G E A K+
Sbjct: 169 QACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSE 228
Query: 329 MEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEG 388
ME+ + PD T + +++V K +A ++M R GV + + + F EG
Sbjct: 229 MEEKGVFPDIFTYNTLISVYCKKSMHF-EALSVQDRMERSGVAPNIVTYNSFIHGFSREG 287
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
+ A + E+ K V +N + Y TL+D +C+ N ++EA L M+++ P T+N
Sbjct: 288 RMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYN 346
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK 508
++ + + LL EM ++P + LI+AY K+ DM + +K K
Sbjct: 347 SILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYC---KIEDMVSAVKVKKKM 403
Query: 509 V--GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
+ G+K +SY ALIH + E A +M +G P TY+
Sbjct: 404 IESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYS------------ 451
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
W LVDGF Q + E ++ EF K GL V Y L
Sbjct: 452 ------W-----------------LVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGL 488
Query: 627 MNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
+ + Q L + M L DSV ++TM Y
Sbjct: 489 IRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAY 525
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 137/286 (47%), Gaps = 2/286 (0%)
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM 470
V++ LM + K+ + ++ +F ++++ +KP +L+++ ++ V + +M
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 471 QDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW 530
+G+ + Y L+ A + + A +M++ G+ P +Y LI Y
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGD-PEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 531 HEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI 590
H +A + M+R G+ P+I TY + + GF R G + ++++ + + V VT+
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFR-EIKDDVTANHVTYTT 312
Query: 591 LVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN 650
L+DG+ + EA + G P V+TYN ++ G+ + +LL EM+
Sbjct: 313 LIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKK 372
Query: 651 LKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
++PD++T +T+I K+MI+SG +D+ SY+ L
Sbjct: 373 IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKAL 418
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 79/152 (51%)
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMK 571
+ SH ++ L+ Y+ +G + V FE ++ G+KP ++ T LL+ + T T+ K
Sbjct: 130 EDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWK 189
Query: 572 IWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYA 631
I+K M+ V +N+LV +K G +A ++SE + G+ P + TYN L++ Y
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC 249
Query: 632 RGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
+ H + + M + P+ VTY++ I+
Sbjct: 250 KKSMHFEALSVQDRMERSGVAPNIVTYNSFIH 281
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 170/393 (43%), Gaps = 39/393 (9%)
Query: 307 NAAISGLLC---C--GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
NAA+ L C G ++ W++ M+ IRPD V ++ + + K G K+A
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG-FLKEATSV 328
Query: 362 FEKMNRKGVKWS-----------------EE---------------VLGAIVKSFCAEGL 389
K+ G+ EE V + + + C+ G
Sbjct: 329 LFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGD 388
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
+ RA I E+ + G+ + + Y T++D +C ++A F + P+ T I
Sbjct: 389 MLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTI 448
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
L+ A SR E++ M+ GLK +Y L+ YG+ +++ + + +M+
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF-ELIDEMRSA 507
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
GI P +Y LIH+ V G+ ++A + R G PS +T ++ GF + GD Q
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
+W M +++ VT + L+ G+ K + +A + ++ GL P V+ YN L++
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
Y G K +L+ M + P+ T+ ++
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/505 (23%), Positives = 206/505 (40%), Gaps = 70/505 (13%)
Query: 252 LYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMG----DKLMVLFRNLPSSKK-------- 299
LYFF+W + R+ + + +L M D L+ L + ++
Sbjct: 130 LYFFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKD 189
Query: 300 -FR---DVHIYNAAISGLL-CCGRYED---AWKVYESMEKDNIRPDHVTC-SIMVTVMRK 350
F D + S L+ CC R A K+ +++ I P C S++ ++R
Sbjct: 190 LFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRV 249
Query: 351 LGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAI 410
G A F E M +G + VL ++ +C++G + + M+ G+ + +
Sbjct: 250 HGLEL--AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIV 307
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMK------------------AKNVKPTAATFNILMH 452
+ +D CK+ ++EA + ++K K KP A L+H
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI--KLIH 365
Query: 453 AYSRRMQPKI------------------VENLLAEMQDIGLKPTANSYTCLISAYGRQKK 494
++ R++P I + E+ ++GL P YT +I Y +
Sbjct: 366 SF--RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGR 423
Query: 495 MSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYT 554
+D A F + K G P+ + T LI A S G A F NM+ EG+K + TY
Sbjct: 424 -TDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYN 482
Query: 555 TLLDGFRRAGDTQTMMKIWKL---MMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF 611
L+ G+ G T + K+++L M S + T+NIL+ +G EA ++ISE
Sbjct: 483 NLMHGY---GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 612 GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXX 671
+ G P+ + + ++ +++ G + L MA L +KPD VT S +++
Sbjct: 540 IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRM 599
Query: 672 XXXXXYHKQMIKSGQVMDVDSYQKL 696
+++ +G DV Y L
Sbjct: 600 EKAIVLFNKLLDAGLKPDVVLYNTL 624
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 152/320 (47%), Gaps = 8/320 (2%)
Query: 275 FPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNI 334
F +G+ KL+ FR P ++ +Y++ +S + G A +++ + + +
Sbjct: 351 FCKVGKPEEAIKLIHSFRLRP------NIFVYSSFLSNICSTGDMLRASTIFQEIFELGL 404
Query: 335 RPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRAL 394
PD V + M+ LGR+ K A+ +F + + G S ++ + G +S A
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDK-AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAE 463
Query: 395 IIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAY 454
+ M+ +G+ + + YN LM + K++ + + L EM++ + P AT+NIL+H+
Sbjct: 464 SVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Query: 455 SRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPT 514
R +++E+ G P+ ++T +I + ++ + A + M + +KP
Sbjct: 524 VVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQE-AFILWFYMADLRMKPD 582
Query: 515 SHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK 574
+ +AL+H Y + EKA V F + G+KP + Y TL+ G+ GD + ++
Sbjct: 583 VVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIG 642
Query: 575 LMMSEKVEGTKVTFNILVDG 594
LM+ + + T + LV G
Sbjct: 643 LMVQRGMLPNESTHHALVLG 662
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 170/393 (43%), Gaps = 39/393 (9%)
Query: 307 NAAISGLLC---C--GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
NAA+ L C G ++ W++ M+ IRPD V ++ + + K G K+A
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG-FLKEATSV 328
Query: 362 FEKMNRKGVKWS-----------------EE---------------VLGAIVKSFCAEGL 389
K+ G+ EE V + + + C+ G
Sbjct: 329 LFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGD 388
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
+ RA I E+ + G+ + + Y T++D +C ++A F + P+ T I
Sbjct: 389 MLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTI 448
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
L+ A SR E++ M+ GLK +Y L+ YG+ +++ + + +M+
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF-ELIDEMRSA 507
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
GI P +Y LIH+ V G+ ++A + R G PS +T ++ GF + GD Q
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
+W M +++ VT + L+ G+ K + +A + ++ GL P V+ YN L++
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
Y G K +L+ M + P+ T+ ++
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/505 (23%), Positives = 206/505 (40%), Gaps = 70/505 (13%)
Query: 252 LYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMG----DKLMVLFRNLPSSKK-------- 299
LYFF+W + R+ + + +L M D L+ L + ++
Sbjct: 130 LYFFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKD 189
Query: 300 -FR---DVHIYNAAISGLL-CCGRYED---AWKVYESMEKDNIRPDHVTC-SIMVTVMRK 350
F D + S L+ CC R A K+ +++ I P C S++ ++R
Sbjct: 190 LFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRV 249
Query: 351 LGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAI 410
G A F E M +G + VL ++ +C++G + + M+ G+ + +
Sbjct: 250 HGLEL--AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIV 307
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMK------------------AKNVKPTAATFNILMH 452
+ +D CK+ ++EA + ++K K KP A L+H
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI--KLIH 365
Query: 453 AYSRRMQPKI------------------VENLLAEMQDIGLKPTANSYTCLISAYGRQKK 494
++ R++P I + E+ ++GL P YT +I Y +
Sbjct: 366 SF--RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGR 423
Query: 495 MSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYT 554
+D A F + K G P+ + T LI A S G A F NM+ EG+K + TY
Sbjct: 424 -TDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYN 482
Query: 555 TLLDGFRRAGDTQTMMKIWKL---MMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF 611
L+ G+ G T + K+++L M S + T+NIL+ +G EA ++ISE
Sbjct: 483 NLMHGY---GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 612 GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXX 671
+ G P+ + + ++ +++ G + L MA L +KPD VT S +++
Sbjct: 540 IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRM 599
Query: 672 XXXXXYHKQMIKSGQVMDVDSYQKL 696
+++ +G DV Y L
Sbjct: 600 EKAIVLFNKLLDAGLKPDVVLYNTL 624
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 152/320 (47%), Gaps = 8/320 (2%)
Query: 275 FPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNI 334
F +G+ KL+ FR P ++ +Y++ +S + G A +++ + + +
Sbjct: 351 FCKVGKPEEAIKLIHSFRLRP------NIFVYSSFLSNICSTGDMLRASTIFQEIFELGL 404
Query: 335 RPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRAL 394
PD V + M+ LGR+ K A+ +F + + G S ++ + G +S A
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDK-AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAE 463
Query: 395 IIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAY 454
+ M+ +G+ + + YN LM + K++ + + L EM++ + P AT+NIL+H+
Sbjct: 464 SVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Query: 455 SRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPT 514
R +++E+ G P+ ++T +I + ++ + A + M + +KP
Sbjct: 524 VVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQE-AFILWFYMADLRMKPD 582
Query: 515 SHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK 574
+ +AL+H Y + EKA V F + G+KP + Y TL+ G+ GD + ++
Sbjct: 583 VVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIG 642
Query: 575 LMMSEKVEGTKVTFNILVDG 594
LM+ + + T + LV G
Sbjct: 643 LMVQRGMLPNESTHHALVLG 662
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 142/271 (52%), Gaps = 6/271 (2%)
Query: 396 IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYS 455
I SE+E+ G ++I +N +++AF +S ++E+A ++MK + PT +T+N L+ Y
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYG 161
Query: 456 RRMQPKIVENLLA---EMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIK 512
+P+ LL E ++ + P ++ L+ A+ ++KK+ + A + KM++ G++
Sbjct: 162 IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEE-AWEVVKKMEECGVR 220
Query: 513 PTSHSYTALIHAYSVSGWHEKAY--VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
P + +Y + Y G +A V + + +E KP+ T ++ G+ R G + +
Sbjct: 221 PDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL 280
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAY 630
+ + M +VE V FN L++GF + +V++ + + V+TY+ +MNA+
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAW 340
Query: 631 ARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
+ G K Q+ KEM +KPD+ YS +
Sbjct: 341 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSIL 371
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 146/309 (47%), Gaps = 3/309 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
++ +N + + E+AW+V + ME+ +RPD VT + + T + G + +
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 362 FEKM-NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
EKM ++ K + G +V +C EG V L M++ V +N +V+N+L++ F
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
+ + + + MK NVK T++ +M+A+S + + EM G+KP A+
Sbjct: 307 EVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 366
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
+Y+ L Y R K+ A+ L+ V +P +T +I + +G + A F
Sbjct: 367 AYSILAKGYVRAKEPKK--AEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNK 424
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
M + G+ P+I+T+ TL+ G+ ++ ++M V+ TF +L + + G
Sbjct: 425 MCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGL 484
Query: 601 YMEARDVIS 609
E+ I+
Sbjct: 485 TDESNKAIN 493
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 167/364 (45%), Gaps = 12/364 (3%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVT---VMRKLGRSAKDA 358
D +NA I+ G EDA + M++ + P T + ++ + K RS++
Sbjct: 114 DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELL 173
Query: 359 WYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDA 418
E+ N V + +V+++C + V A + +ME+ GV + + YNT+
Sbjct: 174 DLMLEEGNVD-VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATC 232
Query: 419 FCKSNHVEEAEGLFVE---MKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGL 475
+ + AE VE MK K KP T I++ Y R + + + M+++ +
Sbjct: 233 YVQKGETVRAESEVVEKMVMKEK-AKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291
Query: 476 KPTANSYTCLISAYGRQKKMSDMAADAFLK-MKKVGIKPTSHSYTALIHAYSVSGWHEKA 534
+ + LI+ + + M D L MK+ +K +Y+ +++A+S +G+ EKA
Sbjct: 292 EANLVVFNSLINGF--VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKA 349
Query: 535 YVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDG 594
F+ M + G+KP Y+ L G+ RA + + ++ + ++ E V F ++ G
Sbjct: 350 AQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNV-VIFTTVISG 408
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
+ G +A V ++ K G+ P + T+ LM Y Q K ++L+ M +KP+
Sbjct: 409 WCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPE 468
Query: 655 SVTY 658
+ T+
Sbjct: 469 NSTF 472
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 150/334 (44%), Gaps = 8/334 (2%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESM-EKDNIR--PDHVTCSIMVTVMRKLGRSAKDAWYFF 362
YN I G G+ E + ++ + M E+ N+ P+ T +++V K + ++AW
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK-KKKVEEAWEVV 211
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRAL--IIQSEMEKKGVFSNAIVYNTLMDAFC 420
+KM GV+ I + +G RA +++ + K+ N ++ +C
Sbjct: 212 KKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYC 271
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
+ V + MK V+ FN L++ + M ++ +L M++ +K
Sbjct: 272 REGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVI 331
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
+Y+ +++A+ M + AA F +M K G+KP +H+Y+ L Y + +KA E
Sbjct: 332 TYSTVMNAWSSAGYM-EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLET 390
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
+ E +P++ +TT++ G+ G M+++ M V TF L+ G+ + Q
Sbjct: 391 LIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQ 449
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGG 634
+A +V+ G+ P T+ +L A+ G
Sbjct: 450 PWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAG 483
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 168/387 (43%), Gaps = 39/387 (10%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRK--------------L 351
Y++ I G CG + +YE M K PD V ++V + K L
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 352 GRSAK----------DAWY----------FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
G+S + D W F M G+K +++ EG +
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLE 548
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGL--FVEMKAKNVKPTAATFNI 449
AL + M K G+ +A+ Y TL+DAFCK H++ GL F M+ + A N+
Sbjct: 549 EALFLFFRMFKMGLEPDALAYCTLIDAFCK--HMKPTIGLQLFDLMQRNKISADIAVCNV 606
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
++H + + + + + ++P +Y +I Y +++ D A F +K
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL-DEAERIFELLKVT 665
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
P + + T LIH + + A F M +G KP+ TY L+D F ++ D +
Sbjct: 666 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 725
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
K+++ M + + + V+++I++DG K+G+ EA ++ + L P V+ Y +L+
Sbjct: 726 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 785
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSV 656
Y + G+ + L + M +KPD +
Sbjct: 786 YCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 131/283 (46%), Gaps = 1/283 (0%)
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
++ FC G + RA + ME++G+ + I Y+TL+D + K+ + LF + K
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
VK F+ + Y + + M G+ P +YT LI + ++ + A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE-A 410
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
+ ++ K G++P+ +Y++LI + G + +E+M + G P + Y L+DG
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 560 FRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPT 619
+ G M+ M+ + + V FN L+DG+ + ++ EA V G G+ P
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 620 VMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
V T+ +M G+ + L M + L+PD++ Y T+I
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 184/423 (43%), Gaps = 45/423 (10%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
+V Y I GL GR +A+ +Y + K + P VT S ++ K G + + +
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG-NLRSGFAL 448
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
+E M + G + G +V +GL+ A+ +M + + N +V+N+L+D +C+
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLA--EMQDIGLKPTA 479
N +EA +F M +KP ATF +M M+ ++ E L M +GL+P A
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRV--SIMEGRLEEALFLFFRMFKMGLEPDA 566
Query: 480 NSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
+Y LI A+ + K + + F M++ I +IH E A F
Sbjct: 567 LAYCTLIDAFCKHMKPT-IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 625
Query: 540 NMQREGIKPSIETYTTLLDGF---RRAGDTQTMMKIWKL--------------------- 575
N+ ++P I TY T++ G+ RR + + + ++ K+
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 685
Query: 576 ----------MMSEKVEGTK---VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMT 622
+M+EK G+K VT+ L+D F+K + + E + G+ P++++
Sbjct: 686 DMDGAIRMFSIMAEK--GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 743
Query: 623 YNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMI 682
Y+++++ + G+ + + + L PD V Y+ +I ++ M+
Sbjct: 744 YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHML 803
Query: 683 KSG 685
++G
Sbjct: 804 RNG 806
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 188/448 (41%), Gaps = 6/448 (1%)
Query: 217 LTLEEALAQYGERVSEKECWEVLEVLGKERLLVCC-LYFFQWMRAQEPSLVTPRACTVLF 275
L + + G RV C +VL+ L +++ V L P++VT CT++
Sbjct: 237 LDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVT--FCTLIN 294
Query: 276 PLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIR 335
R M D+ LF+ + D+ Y+ I G G K++ ++
Sbjct: 295 GFCKRGEM-DRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVK 353
Query: 336 PDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALI 395
D V S + V K G A A +++M +G+ + ++K C +G + A
Sbjct: 354 LDVVVFSSTIDVYVKSGDLAT-ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 396 IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYS 455
+ ++ K+G+ + + Y++L+D FCK ++ L+ +M P + +L+ S
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 456 RRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTS 515
++ +M ++ + LI + R + D A F M GIKP
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF-DEALKVFRLMGIYGIKPDV 531
Query: 516 HSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKL 575
++T ++ + G E+A F M + G++P Y TL+D F + ++++ L
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDL 591
Query: 576 MMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQ 635
M K+ N+++ K + +A + + + P ++TYN ++ Y +
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651
Query: 636 HSKLPQLLKEMAALNLKPDSVTYSTMIY 663
+ ++ + + P++VT + +I+
Sbjct: 652 LDEAERIFELLKVTPFGPNTVTLTILIH 679
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 130/268 (48%), Gaps = 6/268 (2%)
Query: 395 IIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAY 454
+ + +E GV ++ V + L FCK V +A + + + + N ++
Sbjct: 207 LCRGGIEPSGVSAHGFVLDAL---FCKG-EVTKALDFHRLVMERGFRVGIVSCNKVLKGL 262
Query: 455 SRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPT 514
S Q ++ LL+ + D G P ++ LI+ + ++ +M D A D F M++ GI+P
Sbjct: 263 SVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEM-DRAFDLFKVMEQRGIEPD 320
Query: 515 SHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK 574
+Y+ LI Y +G + F +G+K + +++ +D + ++GD T ++K
Sbjct: 321 LIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK 380
Query: 575 LMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGG 634
M+ + + VT+ IL+ G + G+ EA + + K G+ P+++TY+ L++ + + G
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 635 QHSKLPQLLKEMAALNLKPDSVTYSTMI 662
L ++M + PD V Y ++
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLV 468
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 206/457 (45%), Gaps = 13/457 (2%)
Query: 203 VGEIVQLARNLPE------NLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQ 256
V ++ +A+N+ + L L+ AL Q G RVS++ +VL LL FFQ
Sbjct: 65 VRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLT--YRFFQ 122
Query: 257 WMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCC 316
W Q + RA ++ + KLM N KK +V + +
Sbjct: 123 WSEKQRHYEHSVRAYHMMIESTAKIRQY-KLMWDLINAMRKKKMLNVETFCIVMRKYARA 181
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEV 376
+ ++A + MEK ++ P+ V + +++ + K ++ + A FE M R +
Sbjct: 182 QKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCK-SKNVRKAQEVFENM-RDRFTPDSKT 239
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
+++ + E + +A + EM G + + Y+ ++D CK+ V+EA G+ M
Sbjct: 240 YSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMD 299
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMS 496
KPT +++L+H Y + + + EM+ G+K + LI A+ + +M
Sbjct: 300 PSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMK 359
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
++ +MK G+ P S S ++ G ++A+ F M + +P +TYT +
Sbjct: 360 NVYR-VLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMV 417
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
+ F + +T K+WK M + V + TF++L++G ++ +A ++ E ++G+
Sbjct: 418 IKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 477
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKP 653
P+ +T+ L + + L L ++M L +P
Sbjct: 478 RPSGVTFGRLRQLLIKEEREDVLKFLNEKMNVLVNEP 514
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 150/332 (45%), Gaps = 11/332 (3%)
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAI-VYNTLMDAFCKSN 423
+++ G++ S+EV+ ++ F GL++ SE ++ + +++ Y+ ++++ K
Sbjct: 91 LDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRH--YEHSVRAYHMMIESTAKIR 148
Query: 424 HVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLA--EMQDIGLKPTANS 481
+ L M+ K + TF I+M Y+R K+ E + A M+ L P +
Sbjct: 149 QYKLMWDLINAMRKKKM-LNVETFCIVMRKYAR--AQKVDEAIYAFNVMEKYDLPPNLVA 205
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
+ L+SA + K + A + F M+ P S +Y+ L+ + KA F M
Sbjct: 206 FNGLLSALCKSKNVRK-AQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREM 263
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
G P I TY+ ++D +AG + I + M + T +++LV + + +
Sbjct: 264 IDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRL 323
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
EA D E + G+ V +N L+ A+ + + + ++LKEM + + P+S + + +
Sbjct: 324 EEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNII 383
Query: 662 IYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSY 693
+ ++MIK + D D+Y
Sbjct: 384 LRHLIERGEKDEAFDVFRKMIKVCEP-DADTY 414
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 172/369 (46%), Gaps = 19/369 (5%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRK---LGRSAKDA 358
DV YN I G ++A+ V M + I PD T + +++ K L R +
Sbjct: 47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQ-- 104
Query: 359 WYFFEKMNRKGVK---WSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
F++M G+ WS L + G + I+ ++ G+ YN L
Sbjct: 105 --LFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK--ILHEDIHLAGLVPGIDTYNIL 160
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGL 475
+DA CKS H + A LF +K++ VKP T+NIL++ + + V+ ++ E++ G
Sbjct: 161 LDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGY 219
Query: 476 KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
P A +YT ++ Y + K++ + FLKMKK G + A++ A +G E+AY
Sbjct: 220 TPNAVTYTTMLKMYFKTKRI-EKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAY 278
Query: 536 VAFENMQREGIKP-SIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDG 594
+ R G + I +Y TLL+ + + G+ + + + + + ++ T I+V+G
Sbjct: 279 ECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNG 338
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
G A ++ G++G+ P+V+T N L++ + G + +L M D
Sbjct: 339 LLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEV----RD 394
Query: 655 SVTYSTMIY 663
TY+++++
Sbjct: 395 EFTYTSVVH 403
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 143/332 (43%), Gaps = 49/332 (14%)
Query: 373 SEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLF 432
S ++L V S C + RA + + + GV + I YNTL+ + + ++EA +
Sbjct: 12 STKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVT 71
Query: 433 VEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQ 492
M+ ++P T+N L+ ++ + V L EM GL P SY L+S Y +
Sbjct: 72 RRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKL 131
Query: 493 KKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIET 552
+ + + G+ P +Y L+ A SG + A F++++ +KP + T
Sbjct: 132 GRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMT 190
Query: 553 YTTLLDGF---RRAGDTQ-------------------TMMKIW----------KLMMSEK 580
Y L++G RR G TM+K++ +L + K
Sbjct: 191 YNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMK 250
Query: 581 VEGTKVTFNILVDGFA---------KQGQYMEARDVISEFGKIGLHP-TVMTYNMLMNAY 630
EG TF DGFA K G+ EA + + E + G +++YN L+N Y
Sbjct: 251 KEG--YTF----DGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLY 304
Query: 631 ARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ G + LL+E+ LKPD T++ ++
Sbjct: 305 FKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIV 336
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 143/318 (44%), Gaps = 12/318 (3%)
Query: 283 MGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKV-YESMEKDNIRPDHVTC 341
M ++++ LF + S D+ YN +S GR+ +A+K+ +E + + P T
Sbjct: 98 MLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTY 157
Query: 342 SIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEME 401
+I++ + K G + +A F+ + + VK ++ C V + E++
Sbjct: 158 NILLDALCKSGHT-DNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELK 215
Query: 402 KKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPK 461
K G NA+ Y T++ + K+ +E+ LF++MK + ++ A + + +
Sbjct: 216 KSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAE 275
Query: 462 IVENLLAEMQDIGLKP-TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTA 520
+ E+ G + SY L++ Y + + D D +++ G+KP +++T
Sbjct: 276 EAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNL-DAVDDLLEEIEMKGLKPDDYTHTI 334
Query: 521 LIHAY---SVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM- 576
+++ +G EK M G++PS+ T L+DG +AG M+++ M
Sbjct: 335 IVNGLLNIGNTGGAEKHLACIGEM---GMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME 391
Query: 577 MSEKVEGTKVTFNILVDG 594
+ ++ T V N+ DG
Sbjct: 392 VRDEFTYTSVVHNLCKDG 409
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 145/296 (48%), Gaps = 38/296 (12%)
Query: 369 GVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGV-FSNAIVYNTLMDAFCKSNHVEE 427
G++ + + +VK C G ++ A ++ EM++ G+ + N+I Y+TLMD + +E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 428 AEGLFVEMKAK-NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLI 486
A LF +M +K + P TFN++++ + R + +
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVE------------------------- 285
Query: 487 SAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGI 546
R KK+ D MKK G P ++Y+AL++ + G ++A F+ +++ G+
Sbjct: 286 ----RAKKILDF-------MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGL 334
Query: 547 KPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARD 606
K YTTL++ F R G+T MK+ M + + +T+N+++ G + +G+ EA
Sbjct: 335 KLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQ 394
Query: 607 VISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
++ ++G G+H +Y +++NA G+ K + L M+ + P T++ ++
Sbjct: 395 MLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 131/307 (42%), Gaps = 40/307 (13%)
Query: 395 IIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAY 454
I ++KG N Y+ L+D + + + +MK + + + F LM +
Sbjct: 75 IFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHF 134
Query: 455 SRR-MQPKIVE----------------------NLLAE--------------MQDIGLKP 477
SR + K++E NLL + ++GL+P
Sbjct: 135 SRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQP 194
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIK-PTSHSYTALIHAYSVSGWHEKAYV 536
+ L+ + + + + A +MK+ GI P S +Y+ L+ ++A
Sbjct: 195 NTCIFNILVKHHCKNGDI-NFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVE 253
Query: 537 AFENM-QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGF 595
FE+M +EGI P T+ +++GF RAG+ + KI M ++ L++GF
Sbjct: 254 LFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGF 313
Query: 596 AKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDS 655
K G+ EA+ E K GL + Y LMN + R G+ + +LL EM A + D+
Sbjct: 314 CKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADT 373
Query: 656 VTYSTMI 662
+TY+ ++
Sbjct: 374 LTYNVIL 380
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 134/313 (42%), Gaps = 6/313 (1%)
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
+PSL C L G + KL++ ++ + + I+N + G
Sbjct: 157 KPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQP--NTCIFNILVKHHCKNGDINF 214
Query: 322 AWKVYESMEKDNIR-PDHVTCSIMVTVMRKLGRSAKDAWYFFEKM-NRKGVKWSEEVLGA 379
A+ V E M++ I P+ +T S ++ + RS K+A FE M +++G+
Sbjct: 215 AFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRS-KEAVELFEDMISKEGISPDPVTFNV 273
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
++ FC G V RA I M+K G N Y+ LM+ FCK ++EA+ F E+K
Sbjct: 274 MINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTG 333
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
+K + LM+ + R + LL EM+ + +Y ++ + + S+ A
Sbjct: 334 LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGR-SEEA 392
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
+ G+ SY +++A +G EKA M GI P T+ L+
Sbjct: 393 LQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVR 452
Query: 560 FRRAGDTQTMMKI 572
+G T+ +++
Sbjct: 453 LCESGYTEIGVRV 465
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 105/242 (43%), Gaps = 1/242 (0%)
Query: 254 FFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGL 313
F+ M ++E P V+ RAG ++ + + + +V+ Y+A ++G
Sbjct: 254 LFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGF 313
Query: 314 LCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWS 373
G+ ++A + ++ ++K ++ D V + ++ + G + +A +M +
Sbjct: 314 CKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGET-DEAMKLLGEMKASRCRAD 372
Query: 374 EEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFV 433
I++ +EG AL + + +GV N Y +++A C + +E+A
Sbjct: 373 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLS 432
Query: 434 EMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQK 493
M + + P AT+N L+ +I +L IGL P S+ ++ + +++
Sbjct: 433 VMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKER 492
Query: 494 KM 495
K+
Sbjct: 493 KL 494
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 204/488 (41%), Gaps = 47/488 (9%)
Query: 213 LPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFF-----QWMRA------- 260
L N+ ++E LA + +EKE + +L +L + + W R+
Sbjct: 86 LDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWV 145
Query: 261 QEPSLVTPR--ACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
E + TP A V+ + RA D LF + D + Y+ I+ G
Sbjct: 146 HEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGM 205
Query: 319 YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLG 378
++ A + ME+D + D V S ++ + R+L +K A F ++ R G+
Sbjct: 206 FDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSK-AISIFSRLKRSGITPDLVAYN 264
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
+++ + L A ++ EM + GV N + Y+TL+ + +++ EA +F EMK
Sbjct: 265 SMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEV 324
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
N T NI++ Y + K + L ++ + ++P SY ++ YG + +
Sbjct: 325 NCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGE- 383
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
A F M++ I+ +Y +I Y + HEKA + MQ GI+P+ TY+T++
Sbjct: 384 AIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIIS 443
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGF----------------------- 595
+ +AG +++ + S VE +V + ++ +
Sbjct: 444 IWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIP 503
Query: 596 --------AKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMA 647
AK G+ EA V + + G + + ++N Y+R ++ + ++ ++M
Sbjct: 504 RETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMR 563
Query: 648 ALNLKPDS 655
PDS
Sbjct: 564 TAGYFPDS 571
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 76/150 (50%)
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI 572
P+ +Y ++ + + A+ F+ M++ + P TY+TL+ F + G + +
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 573 WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
+ M ++V G V ++ L++ + Y +A + S + G+ P ++ YN ++N Y +
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 633 GGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ L+KEM + P++V+YST++
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 129/293 (44%), Gaps = 37/293 (12%)
Query: 320 EDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSA--KDAWYFFEKMNRKGVKWSEEVL 377
++A +++ S+ K +I P+ V+ + T++R G + +A + F M RK ++ +
Sbjct: 347 KEADRLFWSLRKMDIEPNVVSYN---TILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 403
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
++K + +A + EM+ +G+ NAI Y+T++ + K+ ++ A LF ++++
Sbjct: 404 NTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRS 463
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ-------------------------- 471
V+ + ++ AY R + LL E++
Sbjct: 464 SGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWV 523
Query: 472 -----DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYS 526
+ G + + C+I+ Y R ++ ++ + F KM+ G P S+ +++AY
Sbjct: 524 FRQAFESGEVKDISVFGCMINLYSRNQRYVNVI-EVFEKMRTAGYFPDSNVIAMVLNAYG 582
Query: 527 VSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE 579
EKA + MQ EG E + +L + D + + +++ + S+
Sbjct: 583 KQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESD 635
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 132/302 (43%), Gaps = 9/302 (2%)
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
EP++V+ + + G A + + + LFR + ++V YN I +E
Sbjct: 362 EPNVVS---YNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEK 418
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIV 381
A + + M+ I P+ +T S ++++ K G+ + A F+K+ GV+ + + ++
Sbjct: 419 ATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAA-TLFQKLRSSGVEIDQVLYQTMI 477
Query: 382 KSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK 441
++ GL+ A + E++ + I T + K+ EEA +F +
Sbjct: 478 VAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEV 533
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
+ F +++ YSR + V + +M+ G P +N +++AYG+Q++ + A
Sbjct: 534 KDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREF-EKADT 592
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFR 561
+ +M++ G + ++ YS E F+ ++ + S E + + +
Sbjct: 593 VYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYE 652
Query: 562 RA 563
RA
Sbjct: 653 RA 654
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 146/335 (43%), Gaps = 37/335 (11%)
Query: 329 MEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEG 388
M K I PD VT S +V L S KDA Y +M + G+K V ++ + C
Sbjct: 4 MMKLGIEPDIVTASSLVNGF-CLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
LV AL + M+ +G+ N + Y++L+ CKS + +AE EM +K + P TF+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK 508
L+ AY++R + V+ S Y K M M+ D
Sbjct: 123 ALIDAYAKRGKLSKVD----------------------SVY---KMMIQMSID------- 150
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
P +Y++LI+ + ++A + M +G P++ TY+TL +GF ++
Sbjct: 151 ----PNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDD 206
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMN 628
+K+ M V V+ N L+ G+ + G+ A V GL P + +YN+++
Sbjct: 207 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Query: 629 AYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
G+ K + M D +TY+ MI+
Sbjct: 267 GLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIH 301
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 142/314 (45%), Gaps = 9/314 (2%)
Query: 301 RDVHIYNAAISGLLCCGR-YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAW 359
RDV + + + LC R A +V + M+ I P+ VT S ++T + K GR A DA
Sbjct: 46 RDV-VVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLA-DAE 103
Query: 360 YFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAF 419
+M+ K + + A++ ++ G +S+ + M + + N Y++L+
Sbjct: 104 RRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGL 163
Query: 420 CKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAY--SRRMQPKIVENLLAEMQDIGLKP 477
C N V+EA + M +K P T++ L + + S R+ I LL +M G+
Sbjct: 164 CMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI--KLLDDMPQRGVAA 221
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
S LI Y + K+ D+A F M G+ P SY ++ +G EKA
Sbjct: 222 NTVSCNTLIKGYFQAGKI-DLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSR 280
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAK 597
FE+MQ+ I TYT ++ G +A + ++ + ++VE + I++ +
Sbjct: 281 FEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNR 340
Query: 598 QGQYMEARDVISEF 611
G EA D ++ F
Sbjct: 341 AGMRTEA-DALNRF 353
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%)
Query: 504 LKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRA 563
LKM K+GI+P + ++L++ + +S + A M++ GIK + T L+D +
Sbjct: 2 LKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKN 61
Query: 564 GDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTY 623
+++ K M + VT++ L+ G K G+ +A + E ++P V+T+
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 624 NMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIK 683
+ L++AYA+ G+ SK+ + K M +++ P+ TYS++IY MI
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 684 SGQVMDVDSYQKL 696
G +V +Y L
Sbjct: 182 KGCTPNVVTYSTL 194
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 170/401 (42%), Gaps = 18/401 (4%)
Query: 278 LGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPD 337
L AG +K + R + D Y+ ++ L + E A+ ++E M++ + D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 338 HVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQ 397
T +IMV K G + A +F +M G + A++ ++ VS A +
Sbjct: 518 VYTYTIMVDSFCKAGL-IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 398 SEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM-KAKNV---------------K 441
M +G N + Y+ L+D CK+ VE+A +F M +K+V +
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
P T+ L+ + + + + LL M G +P Y LI + K+ D A +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL-DEAQE 695
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFR 561
+M + G T ++Y++LI Y + A M P++ YT ++DG
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 562 RAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVM 621
+ G T K+ ++M + + VT+ ++DGF G+ +++ G G+ P +
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815
Query: 622 TYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
TY +L++ + G LL+EM + + Y +I
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 188/460 (40%), Gaps = 56/460 (12%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T++ +AG+ ++ F + +V Y A I L + A +++E+M
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
+ P+ VT S ++ K G+ K A FE+M C V
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEK-ACQIFERM-------------------CGSKDVP 621
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILM 451
+ + + N + Y L+D FCKS+ VEEA L M + +P ++ L+
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI 511
+ + + + EM + G T +Y+ LI Y + K+ D+A+ KM +
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR-QDLASKVLSKMLENSC 740
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMK 571
P YT +I G ++AY + M+ +G +P++ TYT ++DGF G +T ++
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 572 IWKLMMSEKVEGTKVTFNILVDGFAKQG-------------------------------- 599
+ + M S+ V VT+ +L+D K G
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN 860
Query: 600 -QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN--LKPDSV 656
+++E+ ++ E G+ P + Y +L++ + + +LL+E+A + L S
Sbjct: 861 KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 920
Query: 657 TYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
TY+++I +M K G + ++ S+ L
Sbjct: 921 TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 960
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 119/515 (23%), Positives = 194/515 (37%), Gaps = 51/515 (9%)
Query: 223 LAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQEPSLVTPRACTVLFPLLGRAG 282
L Q+ E++SE EVL ++ + ++ FF W Q T L L+ R
Sbjct: 123 LRQFREKLSESLVIEVLRLIARPSAVIS---FFVWAGRQIGYKHTAPVYNALVDLIVRDD 179
Query: 283 -------------------MGDKLMVLFR-------------NLPSSKKFR---DVHIYN 307
G+ L VL R L K FR YN
Sbjct: 180 DEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN 239
Query: 308 AAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNR 367
I L R + A ++ M N+R D T + K+G+ ++A E N
Sbjct: 240 CLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGK-WREALTLVETENF 298
Query: 368 --KGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
V +++ ++ C L A+ + M N + Y+TL+ +
Sbjct: 299 VPDTVFYTK-----LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
+ + M + P+ FN L+HAY LL +M G P Y L
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Query: 486 ISAYGRQKK-----MSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
I + K + D+A A+ +M G+ + ++ +G +EKA+
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
M +G P TY+ +L+ A + +++ M + T+ I+VD F K G
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
+AR +E ++G P V+TY L++AY + + S +L + M + P+ VTYS
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 661 MIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQK 695
+I ++M S V DVD Y K
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 171/421 (40%), Gaps = 65/421 (15%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVM---RKLGRSAKDA 358
D Y ISGL +E+A M + P+ VT S ++ ++LGR +
Sbjct: 301 DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKR-- 358
Query: 359 WYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDA 418
M +G S ++ ++V ++C G S A + +M K G +VYN L+ +
Sbjct: 359 --VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416
Query: 419 -----------------------------------------FCKSNHVEEAEGLFVEMKA 437
C + E+A + EM
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
+ P +T++ +++ + ++ L EM+ GL +YT ++ ++ + + +
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA-GLIE 535
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
A F +M++VG P +YTALIHAY + A FE M EG P+I TY+ L+
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 558 DGFRRAGDTQTMMKIWKLMMSEK----------------VEGTKVTFNILVDGFAKQGQY 601
DG +AG + +I++ M K VT+ L+DGF K +
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRV 655
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
EAR ++ G P + Y+ L++ + G+ + ++ EM+ TYS++
Sbjct: 656 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSL 715
Query: 662 I 662
I
Sbjct: 716 I 716
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 176/435 (40%), Gaps = 74/435 (17%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
L + + K D+ IYN GL G ++A++ + ME ++P +VT ++++ +
Sbjct: 453 LMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLI 512
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGL-------------------- 389
G K A F+E + K S E ++VK FCA G
Sbjct: 513 DAGELDK-AEAFYESLEHK----SRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVY 567
Query: 390 -------------VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
+S+A + M K GV +Y L+ A+C+ N+V +A F +
Sbjct: 568 FTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILV 627
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMS 496
K + P T+ I+++ Y R +PK L +M+ +KP +Y+ L++ S
Sbjct: 628 TKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN--------S 679
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGI---------- 546
D D +M+ + P YT +I+ Y +K Y F++M+R I
Sbjct: 680 DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL 739
Query: 547 ------------------KPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTF 588
KP + YT L+D + GD +I+ M+ V+ +
Sbjct: 740 LKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPY 799
Query: 589 NILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA 648
L+ K G EA+ + + G+ P V+ Y L+ R G K +L+KEM
Sbjct: 800 TALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLE 859
Query: 649 LNLKPDSVTYSTMIY 663
+KP + S + Y
Sbjct: 860 KGIKPTKASLSAVHY 874
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 141/339 (41%), Gaps = 22/339 (6%)
Query: 336 PDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFC-------AEG 388
PD + +++ M GRS +F+E + R G+ +V++ E
Sbjct: 180 PDIKALNFLISRMIASGRSDMVVGFFWE-IERLGLDADAHTYVLVVQALWRNDDKEELEK 238
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
L+SR LI SE VF Y ++ C + + A L ++ N+ +
Sbjct: 239 LLSRLLI--SETRNPCVF-----YLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLG 291
Query: 449 ILMHAYSR----RMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMS-DMAADAF 503
I R M+ + E+++ +M+ G+ P Y+ +I G +K M+ A D F
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIE--GHRKNMNIPKAVDVF 349
Query: 504 LKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRA 563
KM K + ++++ Y G +AY F+ + I Y D +
Sbjct: 350 NKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKL 409
Query: 564 GDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTY 623
G + +++++ M + + + + L+ G QG+ +A D++ E G P ++ Y
Sbjct: 410 GKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIY 469
Query: 624 NMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
N+L A G + + LK M +KP VT++ +I
Sbjct: 470 NVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVI 508
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 5/251 (1%)
Query: 358 AWYFFEKMNRKGVKWSEEVLGA----IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYN 413
A++ + + + + LG +V+ C E + A + +MEK G+ + VY+
Sbjct: 271 AYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYS 330
Query: 414 TLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDI 473
+++ K+ ++ +A +F +M K + + ++ Y + +L E ++
Sbjct: 331 AIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRET 390
Query: 474 GLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEK 533
+ Y A G+ K+ + A + F +M GI P +YT LI + G
Sbjct: 391 NISLDRVCYNVAFDALGKLGKVEE-AIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSD 449
Query: 534 AYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVD 593
A+ M G P I Y L G G Q + K+M + V+ T VT N++++
Sbjct: 450 AFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIE 509
Query: 594 GFAKQGQYMEA 604
G G+ +A
Sbjct: 510 GLIDAGELDKA 520
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 188/431 (43%), Gaps = 15/431 (3%)
Query: 238 VLEVLGKERLLVCCLYFFQWMRAQ--EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLP 295
V++ L K L FQ MR+ +P T +L + + G+ D+ + L + +
Sbjct: 186 VIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTY---NILIHGVCKKGVVDEAIRLVKQME 242
Query: 296 SSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMV-TVMRKL--G 352
+V Y I G L GR ++A K E M + P+ T V + R L
Sbjct: 243 QEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPC 302
Query: 353 RSAKDAWYFFEK-MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIV 411
++ + F EK N + V + A++ + ++ ++G ++
Sbjct: 303 KAFEVLVGFMEKDSNLQRVGYD-----AVLYCLSNNSMAKETGQFLRKIGERGYIPDSST 357
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
+N M K + + E +F ++ VKP + +L+ A + + L +M
Sbjct: 358 FNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMG 417
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
GL + SY +I + +++ + AA +M+ GI P ++ + YSV G
Sbjct: 418 VDGLLSSVYSYNAVIDCLCKARRIEN-AAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDV 476
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
+K + E + G KP + T++ +++ RA + + +K M+ +E ++T+NIL
Sbjct: 477 KKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNIL 536
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
+ G + + ++ + GL P + YN + ++ + + K +LLK M + L
Sbjct: 537 IRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596
Query: 652 KPDSVTYSTMI 662
KPD+ TYST+I
Sbjct: 597 KPDNFTYSTLI 607
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/427 (19%), Positives = 159/427 (37%), Gaps = 76/427 (17%)
Query: 273 VLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKD 332
VL GR G+ +F + +YNA I L+ + A+ ++ M D
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 333 NIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSR 392
+PD T +I++ GV C +G+V
Sbjct: 210 GCKPDRFTYNILI----------------------HGV--------------CKKGVVDE 233
Query: 393 ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMH 452
A+ + +ME++G N Y L+D F + V+EA M+ + + P AT +H
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVH 293
Query: 453 AYSRRMQP-KIVENLLAEMQ----------------------------------DIGLKP 477
R + P K E L+ M+ + G P
Sbjct: 294 GIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIP 353
Query: 478 TANSYTCLISAYGRQKKMSDMAA--DAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
++++ +S + + + D F+ G+KP + Y L+ A + +
Sbjct: 354 DSSTFNAAMSCLLKGHDLVETCRIFDGFVSR---GVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 536 VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGF 595
+ M +G+ S+ +Y ++D +A + M + VTFN + G+
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 596 AKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDS 655
+ +G + V+ + G P V+T+++++N R + KEM ++P+
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
Query: 656 VTYSTMI 662
+TY+ +I
Sbjct: 531 ITYNILI 537
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 41/307 (13%)
Query: 431 LFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYG 490
L E++ + + +L+ ++ R K ++ A++ +G+KP+ Y +I A
Sbjct: 132 LLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALV 191
Query: 491 RQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSI 550
+ + D+A F +M+ G KP +Y LIH G ++A + M++EG +P++
Sbjct: 192 KSNSL-DLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNV 250
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVT-----------------FNILVD 593
TYT L+DGF AG +K ++M K+ + T F +LV
Sbjct: 251 FTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLV- 309
Query: 594 GFAKQGQYM-------------------EARDVISEFGKIGLHPTVMTYNMLMNAYARGG 634
GF ++ + E + + G+ G P T+N M+ +G
Sbjct: 310 GFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGH 369
Query: 635 QHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQ 694
+ ++ + +KP Y ++ Y KQM G + V SY
Sbjct: 370 DLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYN 429
Query: 695 KLRAILD 701
A++D
Sbjct: 430 ---AVID 433
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 1/247 (0%)
Query: 448 NILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMK 507
++L +A R+ + LL E++D G + + LI ++GR ++ D F ++
Sbjct: 114 SVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLG-LAKYCNDVFAQIS 172
Query: 508 KVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQ 567
+G+KP++ Y A+I A S + AY+ F+ M+ +G KP TY L+ G + G
Sbjct: 173 FLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVD 232
Query: 568 TMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLM 627
+++ K M E T+ IL+DGF G+ EA + L+P T +
Sbjct: 233 EAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFV 292
Query: 628 NAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQV 687
+ R K ++L + V Y ++Y + +++ + G +
Sbjct: 293 HGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYI 352
Query: 688 MDVDSYQ 694
D ++
Sbjct: 353 PDSSTFN 359
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 137/344 (39%), Gaps = 50/344 (14%)
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
+++ G + S+E++ ++ S+ GL + +++ G+ + +YN ++DA
Sbjct: 132 LLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALV 191
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
KSN ++ A F +M++ KP T+NIL+H ++ L+ +M+ G +P
Sbjct: 192 KSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVF 251
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIH----------AYSV-SG 529
+YT LI + ++ D A M+ + P + +H A+ V G
Sbjct: 252 TYTILIDGFLIAGRV-DEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVG 310
Query: 530 WHEKAYVAFENMQR----------------------------EGIKPSIETYTTLLDGFR 561
+ EK N+QR G P T+ +
Sbjct: 311 FMEKD----SNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLL 366
Query: 562 RAGDTQTMMKIWKLMMSEKVEGTKVTFN---ILVDGFAKQGQYMEARDVISEFGKIGLHP 618
+ D +I+ +S G K FN +LV ++ E + + G GL
Sbjct: 367 KGHDLVETCRIFDGFVS---RGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLS 423
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+V +YN +++ + + L EM + P+ VT++T +
Sbjct: 424 SVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 89/178 (50%), Gaps = 3/178 (1%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
+N +SG G + V E + +PD +T S+++ + + + KDA+ F++M
Sbjct: 463 FNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCR-AKEIKDAFDCFKEM 521
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
G++ +E +++S C+ G R++ + ++M++ G+ + YN + +FCK V
Sbjct: 522 LEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKV 581
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYT 483
++AE L M +KP T++ L+ A S + + + ++ G P +SYT
Sbjct: 582 KKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVP--DSYT 637
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 156/360 (43%), Gaps = 27/360 (7%)
Query: 343 IMVTVMRKL-----GRSAKDAWYFFEKMNRKGVKWS--EEVLGAIVKSF---------CA 386
++V ++R L R AK A+ FF WS +E V S+ C
Sbjct: 112 VLVGILRNLSYDNKARCAKLAYRFF--------LWSGEQECFRHTVNSYHLLMKIFAECG 163
Query: 387 EGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAAT 446
E L+ EM + G + A +N L+ + ++ ++A F++ K N +P +
Sbjct: 164 EYKAMWRLV--DEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHS 221
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
+N ++++ Q K++E + +M + G P +Y L+ R KM D F +M
Sbjct: 222 YNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM-DRFDRLFDEM 280
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
+ G P S++Y L+H A +M+ GI PS+ YTTL+DG RAG+
Sbjct: 281 ARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNL 340
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
+ M+ V + +++ G+ G+ +A+++ E G P V TYN +
Sbjct: 341 EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSM 400
Query: 627 MNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQ 686
+ G+ + LLKEM + P+ V YST++ ++M+K G
Sbjct: 401 IRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGH 460
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 141/315 (44%), Gaps = 12/315 (3%)
Query: 316 CGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEE 375
CG Y+ W++ + M +D T ++++ + G AK A F K + +
Sbjct: 162 CGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGL-AKQAVVQFMKSKTFNYRPFKH 220
Query: 376 VLGAIVKSFCAEGLVSRALI--IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFV 433
AI+ S G+ LI + +M + G + + YN L+ + ++ + LF
Sbjct: 221 SYNAILNSLL--GVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFD 278
Query: 434 EMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQK 493
EM P + T+NIL+H + +P L M+++G+ P+ YT LI R
Sbjct: 279 EMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAG 338
Query: 494 KMSDMAADAFL-KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIET 552
+ A FL +M K G +P YT +I Y VSG +KA F M +G P++ T
Sbjct: 339 NLE--ACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFT 396
Query: 553 YTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFG 612
Y +++ G AG+ + + K M S V ++ LV K G+ EAR VI E
Sbjct: 397 YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMV 456
Query: 613 KIG----LHPTVMTY 623
K G L P +M Y
Sbjct: 457 KKGHYVHLVPKMMKY 471
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 126/318 (39%), Gaps = 37/318 (11%)
Query: 260 AQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRY 319
Q+ T R +L G AG+ + +V F + H YNA ++ LL +Y
Sbjct: 176 VQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQY 235
Query: 320 EDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGA 379
+ VY+ M +D PD +T +I++ +LG+ ++ +R
Sbjct: 236 KLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGK--------MDRFDR------------ 275
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
+ EM + G ++ YN L+ K N A MK
Sbjct: 276 ----------------LFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVG 319
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
+ P+ + L+ SR + + L EM G +P YT +I+ Y ++ D A
Sbjct: 320 IDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGEL-DKA 378
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
+ F +M G P +Y ++I ++G +A + M+ G P+ Y+TL+
Sbjct: 379 KEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSY 438
Query: 560 FRRAGDTQTMMKIWKLMM 577
R+AG K+ + M+
Sbjct: 439 LRKAGKLSEARKVIREMV 456
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 147/339 (43%), Gaps = 38/339 (11%)
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
F + +G ++V C G V A I M + G + I YN+L+D C
Sbjct: 43 FLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHC 102
Query: 421 KSNHVEEAEGLFVEMKAKN---VKPTAATFNILMHAYSRR----------------MQPK 461
++ + A + ++A + KP +FN L + +S+ P
Sbjct: 103 RNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPN 162
Query: 462 IV-------------ENLLA-----EMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAF 503
+V E LA M+ L P ++TCLI Y + + ++A +
Sbjct: 163 VVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDL-EVAVSLY 221
Query: 504 LKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRA 563
+M++V + +YTALI + G ++A + M + ++P+ YTT++DGF +
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 564 GDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTY 623
GD+ MK M+++ + + +++ G G+ EA +++ + K L P ++ +
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341
Query: 624 NMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+MNAY + G+ + ++ +PD V STMI
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 150/353 (42%), Gaps = 13/353 (3%)
Query: 336 PDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALI 395
P+ VT S + K G + A F M R + + ++ +C G + A+
Sbjct: 161 PNVVTYSTWIDTFCKSGE-LQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 396 IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYS 455
+ EM + + N + Y L+D FCK ++ AE ++ M V+P + + ++ +
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 456 RRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY---GRQKKMSDMAADAFLKMKKVGIK 512
+R LA+M + G++ +Y +IS G+ K+ +++ D M+K +
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVED----MEKSDLV 335
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI 572
P +T +++AY SG + A + + G +P + +T++DG + G +
Sbjct: 336 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVY 395
Query: 573 WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
+ + EK V + +L+D K+G ++E + S+ + GL P Y + +
Sbjct: 396 FCI---EK--ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCK 450
Query: 633 GGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSG 685
G +L M L D + Y+T+IY +M+ SG
Sbjct: 451 QGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSG 503
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 161/363 (44%), Gaps = 14/363 (3%)
Query: 260 AQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRY 319
A P++VT T L +AG + + L++ + + +V Y A I G G
Sbjct: 193 ALSPNVVTF---TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEM 249
Query: 320 EDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGA 379
+ A ++Y M +D + P+ + + ++ + G S +A F KM +G++ G
Sbjct: 250 QRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDS-DNAMKFLAKMLNQGMRLDITAYGV 308
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
I+ C G + A I +MEK + + +++ T+M+A+ KS ++ A ++ ++ +
Sbjct: 309 IISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368
Query: 440 VKPTAATFNILMHAYSR--RMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
+P + ++ ++ ++ IV + + D+ YT LI A ++ +
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV-------MYTVLIDALCKEGDFIE 421
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
+ F K+ + G+ P YT+ I G A+ M +EG+ + YTTL+
Sbjct: 422 VER-LFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
G G +++ M++ + F++L+ + K+G A D++ + + GL
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Query: 618 PTV 620
V
Sbjct: 541 TAV 543
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 165/409 (40%), Gaps = 61/409 (14%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCC-----------------GRYEDAWKVYESMEKD 332
LF K +V +Y + L CC G + A K + SM++D
Sbjct: 135 LFNGFSKMKMLDEVFVYMGVM--LKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRD 192
Query: 333 NIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSR 392
+ P+ VT + ++ K G + A +++M R + + A++ FC +G + R
Sbjct: 193 ALSPNVVTFTCLIDGYCKAG-DLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQR 251
Query: 393 ALIIQSEMEKKGVFSNAIVYNTLMDAF--------------------------------- 419
A + S M + V N++VY T++D F
Sbjct: 252 AEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIIS 311
Query: 420 --CKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKP 477
C + ++EA + +M+ ++ P F +M+AY + + K N+ ++ + G +P
Sbjct: 312 GLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP 371
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
+ + +I + ++ + A + ++K YT LI A G +
Sbjct: 372 DVVALSTMIDGIAKNGQLHE--AIVYFCIEK----ANDVMYTVLIDALCKEGDFIEVERL 425
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAK 597
F + G+ P YT+ + G + G+ K+ M+ E + + + L+ G A
Sbjct: 426 FSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLAS 485
Query: 598 QGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
+G +EAR V E G+ P +++L+ AY + G + LL +M
Sbjct: 486 KGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 134/307 (43%), Gaps = 3/307 (0%)
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
+V AL S + K + N + SN + + ++ P ++FN
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM--SDMAADAFLKM 506
++ + Q K E+++ M G +P SY LI + R + + + ++
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
KP S+ +L + +S ++ +V + + + P++ TY+T +D F ++G+
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFV-YMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
Q +K + M + + VTF L+DG+ K G A + E ++ + V+TY L
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 627 MNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQ 686
++ + + G+ + ++ M ++P+S+ Y+T+I + +M+ G
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Query: 687 VMDVDSY 693
+D+ +Y
Sbjct: 300 RLDITAY 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 85/212 (40%), Gaps = 29/212 (13%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGR-------- 353
D+ I+ ++ GR + A +Y + + PD V S M+ + K G+
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Query: 354 ---SAKDAWY------------------FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSR 392
A D Y F K++ G+ + + + + C +G +
Sbjct: 397 CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456
Query: 393 ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMH 452
A +++ M ++G+ + + Y TL+ + EA +F EM + P +A F++L+
Sbjct: 457 AFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516
Query: 453 AYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
AY + +LL +MQ GL + C
Sbjct: 517 AYEKEGNMAAASDLLLDMQRRGLVTAVSDADC 548
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 1/249 (0%)
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
M + +K + AIV C +G A + +EM +KG+F N + YN ++D+FC S
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
+A+ L M K + P TF+ L++A+ + + E + EM + PT +Y
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE 544
+I + +Q ++ D A M G P +++ LI+ Y + + F M R
Sbjct: 121 MIDGFCKQDRVDD-AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 545 GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA 604
GI + TYTTL+ GF + GD + M+S V +TF+ ++ G + + +A
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Query: 605 RDVISEFGK 613
++ + K
Sbjct: 240 FAILEDLQK 248
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 2/242 (0%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV I A + L G + +A ++ M + I P+ +T + M+ GR + DA
Sbjct: 9 DVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS-DADQL 67
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
M K + A++ +F E VS A I EM + +F I YN+++D FCK
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ V++A+ + M +K P TF+ L++ Y + + + EM G+ +
Sbjct: 128 QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT 187
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
YT LI + + + D A D +M G+ P ++ ++ KA+ E++
Sbjct: 188 YTTLIHGFCQVGDL-DAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Query: 542 QR 543
Q+
Sbjct: 247 QK 248
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%)
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
A + F +M + GI P +Y +I ++ SG A +M + I P I T++ L++
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP 618
F + +I+K M+ + T +T+N ++DGF KQ + +A+ ++ G P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYH 678
V+T++ L+N Y + + ++ EM + ++VTY+T+I+
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 679 KQMIKSGQVMDVDSYQKLRAIL 700
+MI G D ++ + A L
Sbjct: 209 NEMISCGVAPDYITFHCMLAGL 230
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 1/224 (0%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T + L + G LF + F +V YN I GR+ DA ++ M +
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
I PD VT S ++ K R +A +++M R + + +++ FC + V
Sbjct: 74 KQINPDIVTFSALINAFVK-ERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVD 132
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILM 451
A + M KG + + ++TL++ +CK+ V+ +F EM + + T+ L+
Sbjct: 133 DAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 192
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
H + + ++LL EM G+ P ++ C+++ +K++
Sbjct: 193 HGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 236
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 80/157 (50%)
Query: 506 MKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGD 565
M + IK TA++ G H A F M +GI P++ TY ++D F +G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 566 TQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNM 625
++ + M+ +++ VTF+ L++ F K+ + EA ++ E + + PT +TYN
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 626 LMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+++ + + + ++L MA+ PD VT+ST+I
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLI 157
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%)
Query: 576 MMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQ 635
M ++ V +VD K G ++ A+++ +E + G+ P V+TYN +++++ G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 636 HSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIK 683
S QLL+ M + PD VT+S +I +K+M++
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLR 108
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 195/448 (43%), Gaps = 20/448 (4%)
Query: 202 VVGEIVQLARNLPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQ 261
V+ E+ L RN+ E L + +S EVLE R FF W +
Sbjct: 137 VIDELFALDRNM------EAVLDEMKLDLSHDLIVEVLERFRHARKPA--FRFFCWAAER 188
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
+ R + +L + + ++ + + +K + + A+ +
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKK 247
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRS--AKDAWYFFEKMNRKGVKWSEEVLGA 379
A ++E M+K + + + ++ LGR+ K+A F+K+ + +
Sbjct: 248 AVGIFELMKKYKFK---IGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP-NMMTYTV 303
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
++ +C + A I ++M +G+ + + +N +++ +S +A LF MK+K
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKG 363
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
P ++ I++ + ++ + +M D GL+P A YTCLI+ +G QKK+ D
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL-DTV 422
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
+ +M++ G P +Y ALI + E A + M + I+PSI T+ ++
Sbjct: 423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKS 482
Query: 560 FRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPT 619
+ A + + +W+ M+ + + ++ +L+ G +G+ EA + E G+
Sbjct: 483 YFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTP 542
Query: 620 VMTYNMLMNAYARGGQHSKLPQLLKEMA 647
++ YN + RGGQ P++ +E+A
Sbjct: 543 LIDYNKFAADFHRGGQ----PEIFEELA 566
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 158/369 (42%), Gaps = 4/369 (1%)
Query: 330 EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGL 389
E+ D T + M++++ K R + E+M KG+ + E +K+F A
Sbjct: 187 ERQGFAHDSRTYNSMMSILAKT-RQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKE 244
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
+A+ I M+K N L+D+ ++ +EA+ LF ++K + P T+ +
Sbjct: 245 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTV 303
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
L++ + R + +M D GLKP ++ ++ R +K SD A F MK
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSD-AIKLFHVMKSK 362
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
G P SYT +I + E A F++M G++P YT L+ GF T+
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 422
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
++ K M + T+N L+ A Q A + ++ + + P++ T+NM+M +
Sbjct: 423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKS 482
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMD 689
Y + + +EM + PD +Y+ +I Y ++M+ G
Sbjct: 483 YFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTP 542
Query: 690 VDSYQKLRA 698
+ Y K A
Sbjct: 543 LIDYNKFAA 551
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 137/305 (44%), Gaps = 2/305 (0%)
Query: 358 AWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMD 417
AW+ + M + V+ S E +++ + GL S A+ + ME G + I ++ ++
Sbjct: 170 AWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVIS 229
Query: 418 AFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKP 477
+ EA+ F +K + +P + L+ + R + E + EM+ G++P
Sbjct: 230 NLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP 288
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
+Y+ +I A R ++S A D F M G P + ++ L+ + +G EK
Sbjct: 289 NVYTYSIVIDALCRCGQIS-RAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQV 347
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAK 597
+ M++ G +P TY L++ R + + +K+ M+ +K E TFN + K
Sbjct: 348 YNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEK 407
Query: 598 QGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
+ A + S+ + P +TYN+LM + + ++ KEM ++P+ T
Sbjct: 408 KRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNT 467
Query: 658 YSTMI 662
Y ++
Sbjct: 468 YRLLV 472
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 170/397 (42%), Gaps = 5/397 (1%)
Query: 252 LYFFQWMRAQEP-SLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAI 310
L FF W +++ +P + L G+ D L + S + + I
Sbjct: 134 LAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILI 193
Query: 311 SGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGV 370
+ G +A + ME PD + SI+++ + + R A +A FF+ + +
Sbjct: 194 RRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSR-KRRASEAQSFFDSLKDR-F 251
Query: 371 KWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEG 430
+ V +V+ +C G +S A + EM+ G+ N Y+ ++DA C+ + A
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHD 311
Query: 431 LFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYG 490
+F +M P A TFN LM + + + + V + +M+ +G +P +Y LI A+
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Query: 491 RQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSI 550
R + + + A M K + + ++ + A+ + M +P+
Sbjct: 372 RDENLEN-AVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNT 430
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE 610
TY L+ F + T ++K+ K M ++VE T+ +LV F G + A + E
Sbjct: 431 VTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKE 490
Query: 611 F-GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
+ L P++ Y M++ R GQ K +L+++M
Sbjct: 491 MVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 168/393 (42%), Gaps = 14/393 (3%)
Query: 262 EPSLVTPRACTVLFPLLG--RAGMGDKLMVLFRNLPSSKKFRD---VHIYNAAISGLLCC 316
E S V+P + G R G+ + F N +S+ D H YN I
Sbjct: 105 ETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKV 164
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEV 376
+++ AW + + M+ N+ T +I++ + G A +A + F +M G +
Sbjct: 165 RQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGL-ASEAVHCFNRMEDYGCVPDKIA 223
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
++ + + S A + K + IVY L+ +C++ + EAE +F EMK
Sbjct: 224 FSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMK 282
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY---GRQK 493
++P T++I++ A R Q ++ A+M D G P A ++ L+ + GR +
Sbjct: 283 LAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTE 342
Query: 494 KMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETY 553
K+ + +MKK+G +P + +Y LI A+ E A M ++ + + T+
Sbjct: 343 KV----LQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTF 398
Query: 554 TTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGK 613
T+ + D +++ MM K E VT+NIL+ F + E
Sbjct: 399 NTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDD 458
Query: 614 IGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
+ P V TY +L+ + G + +L KEM
Sbjct: 459 KEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEM 491
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 117/250 (46%), Gaps = 2/250 (0%)
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
YN ++D K + A L MK++NV+ + TF IL+ Y R + M+
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
D G P +++ +IS R+++ S+ A +F K +P YT L+ + +G
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASE--AQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEI 271
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
+A F+ M+ GI+P++ TY+ ++D R G ++ M+ +TFN L
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
+ K G+ + V ++ K+G P +TYN L+ A+ R ++L M
Sbjct: 332 MRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC 391
Query: 652 KPDSVTYSTM 661
+ ++ T++T+
Sbjct: 392 EVNASTFNTI 401
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 109/216 (50%), Gaps = 2/216 (0%)
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
+N ++ + Q + +L+ M+ ++ + ++T LI Y R S+ A F +M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASE-AVHCFNRM 212
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
+ G P +++ +I S +A F+++ ++ +P + YT L+ G+ RAG+
Sbjct: 213 EDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEI 271
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
K++K M +E T++I++D + GQ A DV ++ G P +T+N L
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 627 MNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
M + + G+ K+ Q+ +M L +PD++TY+ +I
Sbjct: 332 MRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLI 367
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 156/343 (45%), Gaps = 12/343 (3%)
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAK--DAWYFFEKMNRKGVKWSE 374
G + A +V + K P+ ++ + +M GR K +A F +M G + S
Sbjct: 160 GNFNGAERVLSVLSKMGSTPNVISYT---ALMESYGRGGKCNNAEAIFRRMQSSGPEPSA 216
Query: 375 EVLGAIVKSFCAEGLVSRALIIQSEM--EKKGVFS-NAIVYNTLMDAFCKSNHVEEAEGL 431
I+K+F A + + EKK + +Y+ ++ + K+ + E+A +
Sbjct: 217 ITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKV 276
Query: 432 FVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGR 491
F M K V + T+N LM S K V + +MQ ++P SY LI AYGR
Sbjct: 277 FSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGR 333
Query: 492 QKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIE 551
++ + A F +M G++PT +Y L+ A+++SG E+A F++M+R+ I P +
Sbjct: 334 ARREEE-ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 392
Query: 552 TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF 611
+YTT+L + A D + K +K + + E VT+ L+ G+AK + +V +
Sbjct: 393 SYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 452
Query: 612 GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
G+ +M+A R KEM + + PD
Sbjct: 453 RLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 495
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 161/360 (44%), Gaps = 43/360 (11%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESM-- 329
T L GR G + +FR + SS Y + + ++++A +V+E++
Sbjct: 185 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 244
Query: 330 -EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEG 388
+K ++PD +M+ + +K G +EK +
Sbjct: 245 EKKSPLKPDQKMYHMMIYMYKKAGN--------YEKARK--------------------- 275
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
+ S M KGV + + YN+LM +F S +E ++ +M+ +++P ++
Sbjct: 276 -------VFSSMVGKGVPQSTVTYNSLM-SFETS--YKEVSKIYDQMQRSDIQPDVVSYA 325
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK 508
+L+ AY R + + ++ EM D G++PT +Y L+ A+ M + A F M++
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA-ISGMVEQAKTVFKSMRR 384
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
I P SYT ++ AY + E A F+ ++ +G +P+I TY TL+ G+ +A D +
Sbjct: 385 DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEK 444
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMN 628
MM++++ M ++ + ++D + + A E G+ P N+L++
Sbjct: 445 MMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLS 504
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 117/282 (41%), Gaps = 34/282 (12%)
Query: 415 LMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIG 474
L+ A+ K + AE + + P ++ LM +Y R + E + MQ G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 475 LKPTANSYTCLISAY--GRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHE 532
+P+A +Y ++ + G + K ++ + L KK +KP Y +I+ Y +G +E
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 533 KAYVAF--------------------------------ENMQREGIKPSIETYTTLLDGF 560
KA F + MQR I+P + +Y L+ +
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAY 331
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTV 620
RA + + +++ M+ V T +NIL+D FA G +A+ V + + P +
Sbjct: 332 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL 391
Query: 621 MTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+Y +++AY + K + +P+ VTY T+I
Sbjct: 392 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI 433
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 110/219 (50%), Gaps = 7/219 (3%)
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
F +L+ AY + E +L+ + +G P SYT L+ +YGR K ++ A F +M
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEA-IFRRM 207
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM---QREGIKPSIETYTTLLDGFRRA 563
+ G +P++ +Y ++ + ++A FE + ++ +KP + Y ++ +++A
Sbjct: 208 QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKA 267
Query: 564 GDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTY 623
G+ + K++ M+ + V + VT+N L+ + + Y E + + + + P V++Y
Sbjct: 268 GNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSY 324
Query: 624 NMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+L+ AY R + + + +EM ++P Y+ ++
Sbjct: 325 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 363
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%)
Query: 584 TKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLL 643
+++ F +L+ + K G + A V+S K+G P V++Y LM +Y RGG+ + +
Sbjct: 145 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 204
Query: 644 KEMAALNLKPDSVTYSTMI 662
+ M + +P ++TY ++
Sbjct: 205 RRMQSSGPEPSAITYQIIL 223
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 156/343 (45%), Gaps = 12/343 (3%)
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAK--DAWYFFEKMNRKGVKWSE 374
G + A +V + K P+ ++ + +M GR K +A F +M G + S
Sbjct: 153 GNFNGAERVLSVLSKMGSTPNVISYT---ALMESYGRGGKCNNAEAIFRRMQSSGPEPSA 209
Query: 375 EVLGAIVKSFCAEGLVSRALIIQSEM--EKKGVFS-NAIVYNTLMDAFCKSNHVEEAEGL 431
I+K+F A + + EKK + +Y+ ++ + K+ + E+A +
Sbjct: 210 ITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKV 269
Query: 432 FVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGR 491
F M K V + T+N LM S K V + +MQ ++P SY LI AYGR
Sbjct: 270 FSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGR 326
Query: 492 QKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIE 551
++ + A F +M G++PT +Y L+ A+++SG E+A F++M+R+ I P +
Sbjct: 327 ARREEE-ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 385
Query: 552 TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF 611
+YTT+L + A D + K +K + + E VT+ L+ G+AK + +V +
Sbjct: 386 SYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 445
Query: 612 GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
G+ +M+A R KEM + + PD
Sbjct: 446 RLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 488
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 161/360 (44%), Gaps = 43/360 (11%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESM-- 329
T L GR G + +FR + SS Y + + ++++A +V+E++
Sbjct: 178 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 237
Query: 330 -EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEG 388
+K ++PD +M+ + +K G +EK +
Sbjct: 238 EKKSPLKPDQKMYHMMIYMYKKAGN--------YEKARK--------------------- 268
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
+ S M KGV + + YN+LM +F S +E ++ +M+ +++P ++
Sbjct: 269 -------VFSSMVGKGVPQSTVTYNSLM-SFETS--YKEVSKIYDQMQRSDIQPDVVSYA 318
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK 508
+L+ AY R + + ++ EM D G++PT +Y L+ A+ M + A F M++
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA-ISGMVEQAKTVFKSMRR 377
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
I P SYT ++ AY + E A F+ ++ +G +P+I TY TL+ G+ +A D +
Sbjct: 378 DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEK 437
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMN 628
MM++++ M ++ + ++D + + A E G+ P N+L++
Sbjct: 438 MMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLS 497
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 117/282 (41%), Gaps = 34/282 (12%)
Query: 415 LMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIG 474
L+ A+ K + AE + + P ++ LM +Y R + E + MQ G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 475 LKPTANSYTCLISAY--GRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHE 532
+P+A +Y ++ + G + K ++ + L KK +KP Y +I+ Y +G +E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 533 KAYVAF--------------------------------ENMQREGIKPSIETYTTLLDGF 560
KA F + MQR I+P + +Y L+ +
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAY 324
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTV 620
RA + + +++ M+ V T +NIL+D FA G +A+ V + + P +
Sbjct: 325 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL 384
Query: 621 MTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+Y +++AY + K + +P+ VTY T+I
Sbjct: 385 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI 426
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 110/219 (50%), Gaps = 7/219 (3%)
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
F +L+ AY + E +L+ + +G P SYT L+ +YGR K ++ A F +M
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEA-IFRRM 200
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM---QREGIKPSIETYTTLLDGFRRA 563
+ G +P++ +Y ++ + ++A FE + ++ +KP + Y ++ +++A
Sbjct: 201 QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKA 260
Query: 564 GDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTY 623
G+ + K++ M+ + V + VT+N L+ + + Y E + + + + P V++Y
Sbjct: 261 GNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSY 317
Query: 624 NMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+L+ AY R + + + +EM ++P Y+ ++
Sbjct: 318 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 356
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%)
Query: 584 TKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLL 643
+++ F +L+ + K G + A V+S K+G P V++Y LM +Y RGG+ + +
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 644 KEMAALNLKPDSVTYSTMI 662
+ M + +P ++TY ++
Sbjct: 198 RRMQSSGPEPSAITYQIIL 216
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 154/306 (50%), Gaps = 16/306 (5%)
Query: 396 IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYS 455
I SE+E+ G ++I +N +++AF +S ++E+A ++MK + PT +T+N L+ Y
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYG 161
Query: 456 RRMQPKIVENLLA---EMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIK 512
+P+ LL E ++ + P ++ L+ A+ ++KK+ + A + KM++ G++
Sbjct: 162 IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEE-AWEVVKKMEECGVR 220
Query: 513 PTSHSYTALIHAYSVSGWHEKA--YVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
P + +Y + Y G +A V + + +E KP+ T ++ G+ R G + +
Sbjct: 221 PDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL 280
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAY 630
+ + M +VE V FN L++GF + M+ RD I E + L +M++N +
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFV---EVMD-RDGIDE---VTLTLLLMSFNEEVELV 333
Query: 631 ARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDV 690
G Q K+ Q+L M N+K D +TYST++ K+M+K+G D
Sbjct: 334 --GNQKMKV-QVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDA 390
Query: 691 DSYQKL 696
+Y L
Sbjct: 391 HAYSIL 396
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 156/358 (43%), Gaps = 48/358 (13%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
++ +N + + E+AW+V + ME+ +RPD VT + + T + G + +
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 362 FEKM-NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
EKM ++ K + G +V +C EG V L M++ V +N +V+N+L++ F
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
V + +G+ T +L+ +++
Sbjct: 307 ---EVMDRDGI-----------DEVTLTLLLMSFNEE----------------------- 329
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
+ G QK M MK+ +K +Y+ +++A+S +G+ EKA F+
Sbjct: 330 -----VELVGNQK----MKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKE 380
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
M + G+KP Y+ L G+ RA + + ++ + ++ E V F ++ G+ G
Sbjct: 381 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNV-VIFTTVISGWCSNGS 439
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
+A V ++ K G+ P + T+ LM Y Q K ++L+ M +KP++ T+
Sbjct: 440 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 497
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 148/324 (45%), Gaps = 7/324 (2%)
Query: 336 PDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRAL- 394
PD+ S +++VM K G++ W F E M G + V A++ + ++AL
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSE-MKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 395 IIQSEMEK-KGVFS---NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
++ ++K KG+ N + YN L+ AF +S V++ LF ++ V P TFN +
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 451 MHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVG 510
M AY + K +E +L M+ KP ++ LI +YG++++ M F + +
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKM-EQTFKSLMRSK 308
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
KPT ++ ++I Y + +KA F+ M PS TY ++ + G
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAY 630
+I++ + T N +++ + + G Y+EA + +HP TY L AY
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY 428
Query: 631 ARGGQHSKLPQLLKEMAALNLKPD 654
+ ++ L+K+M + P+
Sbjct: 429 TKADMKEQVQILMKKMEKDGIVPN 452
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 109/225 (48%), Gaps = 4/225 (1%)
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY--GRQKKMSDMA 499
P ++ L+ ++ Q ++ L +EM++ G +P A+ Y LI+A+ R K +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 500 ADAFL-KMKKVG-IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
+L KMK + +P +Y L+ A++ SG ++ F+++ + P + T+ ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
D + + G + M + M S + + +TFN+L+D + K+ ++ + +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
PT+ T+N ++ Y + K + K+M +N P +TY MI
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 37/263 (14%)
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
+P++VT +L ++G D++ LF++L S DV+ +N + G ++
Sbjct: 205 QPNVVT---YNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKE 261
Query: 322 AWKVYESMEKDNIRPDHVTCSIMV-----------------TVMRKL------------- 351
V M + +PD +T ++++ ++MR
Sbjct: 262 MEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII 321
Query: 352 ----GRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFS 407
R A + F+KMN S ++ + G VSRA I E+ +
Sbjct: 322 NYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVL 381
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
A N +++ +C++ EA+ LF A V P A+T+ L AY++ + V+ L+
Sbjct: 382 KASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILM 441
Query: 468 AEMQDIGLKPTANSYTCLISAYG 490
+M+ G+ P + + +G
Sbjct: 442 KKMEKDGIVPNKRFFLEALEVFG 464
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 192/448 (42%), Gaps = 20/448 (4%)
Query: 202 VVGEIVQLARNLPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQ 261
V+ E+ L RN+ E L + +S EVLE R FF W +
Sbjct: 136 VIDELFALDRNM------EAVLDEMKLDLSHDLIVEVLERFRHARKPA--FRFFCWAAER 187
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
+ R + +L + + ++ + + +K + + A+ +
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKK 246
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRS--AKDAWYFFEKMNRKGVKWSEEVLGA 379
A ++E M+K + + + ++ LGR+ K+A F+K+ + +
Sbjct: 247 AVGIFELMKKYKFK---IGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP-NMMTYTV 302
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
++ +C + A I ++M G+ + + +N +++ +S +A LF MK+K
Sbjct: 303 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 362
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
P ++ I++ + ++ + +M D GL+P A YTCLI+ +G QKK+ D
Sbjct: 363 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL-DTV 421
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
+ +M++ G P +Y ALI + E + M + I+PSI T+ ++
Sbjct: 422 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 481
Query: 560 FRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPT 619
+ A + + +W M+ + + ++ +L+ G +G+ EA + E G+
Sbjct: 482 YFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 541
Query: 620 VMTYNMLMNAYARGGQHSKLPQLLKEMA 647
++ YN + RGGQ P++ +E+A
Sbjct: 542 LIDYNKFAADFHRGGQ----PEIFEELA 565
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 155/369 (42%), Gaps = 4/369 (1%)
Query: 330 EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGL 389
E+ D T + M++++ K R + E+M KG+ + E +K+F A
Sbjct: 186 ERQGFAHDSRTYNSMMSILAKT-RQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKE 243
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
+A+ I M+K N L+D+ ++ +EA+ LF ++K + P T+ +
Sbjct: 244 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTV 302
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
L++ + R + +M D GLKP ++ ++ R K SD A F MK
Sbjct: 303 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD-AIKLFHVMKSK 361
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
G P SYT +I + E A F++M G++P YT L+ GF T+
Sbjct: 362 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 421
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
++ K M + T+N L+ A Q + ++ + + P++ T+NM+M +
Sbjct: 422 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 481
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMD 689
Y + + EM + PD +Y+ +I Y ++M+ G
Sbjct: 482 YFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 541
Query: 690 VDSYQKLRA 698
+ Y K A
Sbjct: 542 LIDYNKFAA 550
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 192/448 (42%), Gaps = 20/448 (4%)
Query: 202 VVGEIVQLARNLPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQ 261
V+ E+ L RN+ E L + +S EVLE R FF W +
Sbjct: 137 VIDELFALDRNM------EAVLDEMKLDLSHDLIVEVLERFRHARKPA--FRFFCWAAER 188
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
+ R + +L + + ++ + + +K + + A+ +
Sbjct: 189 QGFAHASRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKK 247
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRS--AKDAWYFFEKMNRKGVKWSEEVLGA 379
A ++E M+K + + + ++ LGR+ K+A F+K+ + +
Sbjct: 248 AVGIFELMKKYKFK---IGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP-NMMTYTV 303
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
++ +C + A I ++M G+ + + +N +++ +S +A LF MK+K
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 363
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
P ++ I++ + ++ + +M D GL+P A YTCLI+ +G QKK+ D
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL-DTV 422
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
+ +M++ G P +Y ALI + E + M + I+PSI T+ ++
Sbjct: 423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 482
Query: 560 FRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPT 619
+ A + + +W M+ + + ++ +L+ G +G+ EA + E G+
Sbjct: 483 YFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 542
Query: 620 VMTYNMLMNAYARGGQHSKLPQLLKEMA 647
++ YN + RGGQ P++ +E+A
Sbjct: 543 LIDYNKFAADFHRGGQ----PEIFEELA 566
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 142/337 (42%), Gaps = 3/337 (0%)
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
E+M KG+ + E +K+F A +A+ I M+K N L+D+ +
Sbjct: 218 LEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGR 276
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ +EA+ LF ++K + P T+ +L++ + R + +M D GLKP +
Sbjct: 277 AKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVA 335
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
+ ++ R K SD A F MK G P SYT +I + E A F++M
Sbjct: 336 HNVMLEGLLRSMKKSD-AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
G++P YT L+ GF T+ ++ K M + T+N L+ A Q
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
+ ++ + + P++ T+NM+M +Y + + EM + PD +Y+ +
Sbjct: 455 EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 514
Query: 662 IYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKLRA 698
I Y ++M+ G + Y K A
Sbjct: 515 IRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAA 551
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 148/324 (45%), Gaps = 7/324 (2%)
Query: 336 PDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRAL- 394
PD+ S +++VM K G++ W F E M G + V A++ + ++AL
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSE-MKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 395 IIQSEMEK-KGVFS---NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
++ ++K KG+ N + YN L+ AF +S V++ LF ++ V P TFN +
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 451 MHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVG 510
M AY + K +E +L M+ KP ++ LI +YG++++ M F + +
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ-TFKSLMRSK 308
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
KPT ++ ++I Y + +KA F+ M PS TY ++ + G
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAY 630
+I++ + T N +++ + + G Y+EA + +HP TY L AY
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY 428
Query: 631 ARGGQHSKLPQLLKEMAALNLKPD 654
+ ++ L+K+M + P+
Sbjct: 429 TKADMKEQVQILMKKMEKDGIVPN 452
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 109/225 (48%), Gaps = 4/225 (1%)
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY--GRQKKMSDMA 499
P ++ L+ ++ Q ++ L +EM++ G +P A+ Y LI+A+ R K +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 500 ADAFL-KMKKVG-IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
+L KMK + +P +Y L+ A++ SG ++ F+++ + P + T+ ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
D + + G + M + M S + + +TFN+L+D + K+ ++ + +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
PT+ T+N ++ Y + K + K+M +N P +TY MI
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 37/263 (14%)
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
+P++VT +L ++G D++ LF++L S DV+ +N + G ++
Sbjct: 205 QPNVVT---YNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKE 261
Query: 322 AWKVYESMEKDNIRPDHVTCSIMV-----------------TVMRKL------------- 351
V M + +PD +T ++++ ++MR
Sbjct: 262 MEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII 321
Query: 352 ----GRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFS 407
R A + F+KMN S ++ + G VSRA I E+ +
Sbjct: 322 NYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVL 381
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
A N +++ +C++ EA+ LF A V P A+T+ L AY++ + V+ L+
Sbjct: 382 KASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILM 441
Query: 468 AEMQDIGLKPTANSYTCLISAYG 490
+M+ G+ P + + +G
Sbjct: 442 KKMEKDGIVPNKRFFLEALEVFG 464
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 117/251 (46%), Gaps = 2/251 (0%)
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
YN L+ + + VEE + L+ EM V P TFN L++ Y + + + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
G P +YT I+ + R+K++ D A F +M + G SYT LI+ +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEV-DAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
++A M+ + P++ TYT L+D +G M ++K M ++ + +L
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
+ F EA ++ + GL P V+TYN L+ + + H + LL +M NL
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAM-GLLSKMLEQNL 360
Query: 652 KPDSVTYSTMI 662
PD +TY+T+I
Sbjct: 361 VPDLITYNTLI 371
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 117/271 (43%), Gaps = 3/271 (1%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
YN +S L G E+ ++Y M +D + PD T + +V KLG +A + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVV-EAKQYVTWL 181
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
+ G + + C V A + EM + G N + Y L+ ++ +
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
+EA L V+MK N P T+ +L+ A Q NL +M + G+KP YT L
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
I ++ + D A+ M + G+ P +Y ALI + H KA M +
Sbjct: 302 IQSFCSGDTL-DEASGLLEHMLENGLMPNVITYNALIKGFCKKNVH-KAMGLLSKMLEQN 359
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLM 576
+ P + TY TL+ G +G+ + ++ LM
Sbjct: 360 LVPDLITYNTLIAGQCSSGNLDSAYRLLSLM 390
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 5/227 (2%)
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW- 530
+I K T Y L+S+ R + +M + +M + + P +++ L++ Y G+
Sbjct: 113 EIKYKLTPKCYNNLLSSLARFGLVEEMKR-LYTEMLEDLVSPDIYTFNTLVNGYCKLGYV 171
Query: 531 -HEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFN 589
K YV + + + G P TYT+ + G R + K++K M +V++
Sbjct: 172 VEAKQYVTW--LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYT 229
Query: 590 ILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAAL 649
L+ G + + EA ++ + P V TY +L++A GQ S+ L K+M+
Sbjct: 230 QLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSES 289
Query: 650 NLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+KPD Y+ +I + M+++G + +V +Y L
Sbjct: 290 GIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNAL 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D+ + L + +V Y I L G+ +A +++ M + I+PD +++
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG 404
+ G + +A E M G+ + A++K FC + V +A+ + S+M ++
Sbjct: 302 IQSFCS-GDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQN 359
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAAT 446
+ + I YNTL+ C S +++ A L M+ + P T
Sbjct: 360 LVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 169/396 (42%), Gaps = 8/396 (2%)
Query: 270 ACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESM 329
+C+ L L R DK M + R + S D YN I L G A + E M
Sbjct: 141 SCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM 200
Query: 330 EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVK---WSEEVLGAIVKSFCA 386
PD +T + ++ M G +A+ A F++ + G + VL +V +C
Sbjct: 201 SLSGSPPDVITYNTVIRCMFDYG-NAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG 259
Query: 387 EGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAAT 446
+RA+ + +M +G + + + YN+L++ C+ ++EE + + + ++ T
Sbjct: 260 S---ARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVT 316
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
+N L+H+ VE +L M PT +Y LI+ + + +S A D F +M
Sbjct: 317 YNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLS-RAIDFFYQM 375
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
+ P +Y ++ A S G + A ++ P + TY +++DG + G
Sbjct: 376 LEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLM 435
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
+ ++++ M+ + +T L+ GF + EA V+ E G TY ++
Sbjct: 436 KKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLV 495
Query: 627 MNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ + + ++++ M KPD Y+ ++
Sbjct: 496 IQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 154/363 (42%), Gaps = 2/363 (0%)
Query: 301 RDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY 360
D N + L G+ DA K+ E M + N P +CS +V + ++ + K A
Sbjct: 102 NDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDK-AMC 160
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
M G I+ + C +G + AL++ +M G + I YNT++
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
+ E+A + + P T+ +L+ R +L +M G P
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
+Y L++ R+ + ++A+ + G++ + +Y L+H+ + ++
Sbjct: 281 TYNSLVNYNCRRGNLEEVAS-VIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNI 339
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
M + P++ TY L++G +A + + M+ +K VT+N ++ +K+G
Sbjct: 340 MYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGM 399
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
+A +++ P ++TYN +++ A+ G K +L +M + PD +T +
Sbjct: 400 VDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRS 459
Query: 661 MIY 663
+IY
Sbjct: 460 LIY 462
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 131/334 (39%), Gaps = 13/334 (3%)
Query: 388 GLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATF 447
GL S I +++ E +N I++N C + + +A L M N P +
Sbjct: 92 GLSSDGPITENDEET----NNEILHN-----LCSNGKLTDACKLVEVMARHNQVPHFPSC 142
Query: 448 NILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMK 507
+ L+ +R Q +L M G P +Y +I ++ + A M
Sbjct: 143 SNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIR-TALVLLEDMS 201
Query: 508 KVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQ 567
G P +Y +I G E+A +++ + G P + TYT L++ R +
Sbjct: 202 LSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSA 261
Query: 568 TMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLM 627
+++ + M E VT+N LV+ ++G E VI GL +TYN L+
Sbjct: 262 RAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL 321
Query: 628 NAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQV 687
++ ++ ++L M + P +TY+ +I + QM++ +
Sbjct: 322 HSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL 381
Query: 688 MDVDSYQKLRAILDVXXXXXXXXXXXXLLGIVKS 721
D+ +Y +L LLG++K+
Sbjct: 382 PDIVTYN---TVLGAMSKEGMVDDAIELLGLLKN 412
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 73/185 (39%), Gaps = 1/185 (0%)
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
++ C L+SRA+ +M ++ + + YNT++ A K V++A L +K
Sbjct: 355 LINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTC 414
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
P T+N ++ +++ K L +M D G+ P + LI + R + + A
Sbjct: 415 CPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEE-A 473
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
+ G +Y +I E A E M G KP YT ++ G
Sbjct: 474 GQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKG 533
Query: 560 FRRAG 564
G
Sbjct: 534 VEEMG 538
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 102/232 (43%), Gaps = 8/232 (3%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
YN + L +++ ++ M + + P +T +I++ + K ++ +F++ +
Sbjct: 317 YNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 376
Query: 366 NRK---GVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
+K + VLGA+ K EG+V A+ + ++ I YN+++D K
Sbjct: 377 EQKCLPDIVTYNTVLGAMSK----EGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKK 432
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY 482
+++A L+ +M + P T L++ + R + +L E + G ++Y
Sbjct: 433 GLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTY 492
Query: 483 TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKA 534
+I ++K++ +MA + M G KP YTA++ G +A
Sbjct: 493 RLVIQGLCKKKEI-EMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 187/404 (46%), Gaps = 34/404 (8%)
Query: 277 LLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAW-------KVYESM 329
++GR G D +F+ L S + + V++ + + LL R+ D W K ES
Sbjct: 57 IVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLL--HRFRDDWRSALGILKWAESC 114
Query: 330 EKDNIRPDHVTCSIMVTVMRKLGRSAKDAW----YFFEKMNRKGVKW-SEEVLGAIVKSF 384
+ D ++ + LG++ K W F E+M +G K + + I++ F
Sbjct: 115 KGHKHSSDAYDMAVDI-----LGKAKK--WDRMKEFVERM--RGDKLVTLNTVAKIMRRF 165
Query: 385 CAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTA 444
G A+ I + + G+ N N L+D CK VE+A + +++K+ ++ P A
Sbjct: 166 AGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNA 224
Query: 445 ATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQ---KKMSDMAAD 501
TFNI +H + + + + + EM+ G +P SYT +I Y +Q K+ +M ++
Sbjct: 225 HTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSE 284
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFR 561
M+ G P S +YT ++ + + E+A M+R G KP Y L+
Sbjct: 285 ----MEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLA 340
Query: 562 RAGDTQTMMKIWKLMMSE-KVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL-HPT 619
RAG + +++++ M E V T+N ++ + + +A +++ E L +P
Sbjct: 341 RAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPD 400
Query: 620 VMTYNMLMNAYARGGQHSKLPQLLKEMAAL-NLKPDSVTYSTMI 662
V TY L+ + + G ++ +LLKEM +L D TY+ +I
Sbjct: 401 VHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLI 444
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 187/404 (46%), Gaps = 34/404 (8%)
Query: 277 LLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAW-------KVYESM 329
++GR G D +F+ L S + + V++ + + LL R+ D W K ES
Sbjct: 57 IVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLL--HRFRDDWRSALGILKWAESC 114
Query: 330 EKDNIRPDHVTCSIMVTVMRKLGRSAKDAW----YFFEKMNRKGVKW-SEEVLGAIVKSF 384
+ D ++ + LG++ K W F E+M +G K + + I++ F
Sbjct: 115 KGHKHSSDAYDMAVDI-----LGKAKK--WDRMKEFVERM--RGDKLVTLNTVAKIMRRF 165
Query: 385 CAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTA 444
G A+ I + + G+ N N L+D CK VE+A + +++K+ ++ P A
Sbjct: 166 AGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNA 224
Query: 445 ATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQ---KKMSDMAAD 501
TFNI +H + + + + + EM+ G +P SYT +I Y +Q K+ +M ++
Sbjct: 225 HTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSE 284
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFR 561
M+ G P S +YT ++ + + E+A M+R G KP Y L+
Sbjct: 285 ----MEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLA 340
Query: 562 RAGDTQTMMKIWKLMMSE-KVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL-HPT 619
RAG + +++++ M E V T+N ++ + + +A +++ E L +P
Sbjct: 341 RAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPD 400
Query: 620 VMTYNMLMNAYARGGQHSKLPQLLKEMAAL-NLKPDSVTYSTMI 662
V TY L+ + + G ++ +LLKEM +L D TY+ +I
Sbjct: 401 VHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLI 444
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 12/292 (4%)
Query: 304 HIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAK-----DA 358
H YNA + L C ++ W++ M K N VT M VMR+L +S K DA
Sbjct: 167 HTYNAMVDVLGKCRNFDLMWELVNEMNK-NEESKLVTLDTMSKVMRRLAKSGKYNKAVDA 225
Query: 359 WYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDA 418
F E GVK + +++ + E + A + ++ + +A +N L+
Sbjct: 226 --FLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHG 282
Query: 419 FCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPT 478
FCK+ ++A + MK P T+ + AY + + V +L EM++ G P
Sbjct: 283 FCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPN 342
Query: 479 ANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF 538
+YT ++ + G+ K++++ A + KMK+ G P + Y++LIH S +G + A F
Sbjct: 343 VVTYTIVMHSLGKSKQVAE-ALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIF 401
Query: 539 ENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI 590
E+M +G++ + Y T++ + +++ K M E EG + N+
Sbjct: 402 EDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDE--EGESCSPNV 451
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 158/383 (41%), Gaps = 45/383 (11%)
Query: 238 VLEVLGKERLLVCCLYFFQWMRAQEPS-LVTPRACTVLFPLLGRAGMGDKLMVLFRNLPS 296
+++VLGK R M E S LVT + + L ++G +K + F +
Sbjct: 172 MVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEK 231
Query: 297 SKKFR-DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSA 355
S + D N+ + L+ E A +V+ + D I+PD T +I++ K R
Sbjct: 232 SYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHGFCK-ARKF 289
Query: 356 KDAWYFFEKMNRKGVKWSEEVLG--AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYN 413
DA + M K +++ +V+ + V+++C EG R + EM + G N + Y
Sbjct: 290 DDARAMMDLM--KVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYT 347
Query: 414 TLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDI 473
+M + KS V EA G++ +MK P A ++ L+H S+ + K + +M +
Sbjct: 348 IVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQ 407
Query: 474 GLKPTANSYTCLISA---YGRQ-------KKMSDMAADA--------------------- 502
G++ Y +ISA + R K+M D ++
Sbjct: 408 GVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKM 467
Query: 503 ------FLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
M K + +Y LI +SG E+A + FE R+G+ P T L
Sbjct: 468 KLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKML 527
Query: 557 LDGFRRAGDTQTMMKIWKLMMSE 579
+D + + +KI L+ S+
Sbjct: 528 VDELEKKNMAEAKLKIQSLVQSK 550
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 115/263 (43%), Gaps = 7/263 (2%)
Query: 404 GVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQP--- 460
G + YN ++D K + + L EM KN + T + + R +
Sbjct: 161 GYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMN-KNEESKLVTLDTMSKVMRRLAKSGKY 219
Query: 461 -KIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYT 519
K V+ L + G+K + L+ A ++ + + A + FLK+ IKP + ++
Sbjct: 220 NKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSI-EHAHEVFLKLFDT-IKPDARTFN 277
Query: 520 ALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE 579
LIH + + + A + M+ P + TYT+ ++ + + GD + + ++ + M
Sbjct: 278 ILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMREN 337
Query: 580 KVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKL 639
VT+ I++ K Q EA V + + G P Y+ L++ ++ G+
Sbjct: 338 GCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDA 397
Query: 640 PQLLKEMAALNLKPDSVTYSTMI 662
++ ++M ++ D + Y+TMI
Sbjct: 398 AEIFEDMTNQGVRRDVLVYNTMI 420
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 499 AADAFLKMKK-VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
A DAFL+M+K G+K + + +L+ A E A+ F + + IKP T+ L+
Sbjct: 222 AVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILI 280
Query: 558 DGF---RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKI 614
GF R+ D + MM + K+ + VT+ V+ + K+G + +++ E +
Sbjct: 281 HGFCKARKFDDARAMMDLMKVT---EFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMREN 337
Query: 615 GLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXX 674
G +P V+TY ++M++ + Q ++ + ++M PD+ YS++I+
Sbjct: 338 GCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDA 397
Query: 675 XXYHKQMIKSGQVMDVDSYQKL 696
+ M G DV Y +
Sbjct: 398 AEIFEDMTNQGVRRDVLVYNTM 419
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 528 SGWHEKAYVAFENMQRE-GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKV 586
SG + KA AF M++ G+K +L+D + + +++ L + + ++
Sbjct: 216 SGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF-LKLFDTIKPDAR 274
Query: 587 TFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
TFNIL+ GF K ++ +AR ++ P V+TY + AY + G ++ ++L+EM
Sbjct: 275 TFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEM 334
Query: 647 AALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKLRAIL 700
P+ VTY+ +++ +++M + G V D Y L IL
Sbjct: 335 RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 201/489 (41%), Gaps = 42/489 (8%)
Query: 210 ARNLPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQ--EPSLVT 267
AR + +++ + ++++G + S K +L+VL KE + + +F + M A + T
Sbjct: 125 ARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYT 184
Query: 268 PRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYE 327
L R G G KL+ + + +S + +YN + L G+ A +
Sbjct: 185 YGILMKGLSLTNRIGDGFKLLQIMK---TSGVAPNAVVYNTLLHALCKNGKVGRARSLMS 241
Query: 328 SMEKDN-------------------------------IRPDHVTCSIMVTVMRKLGRSAK 356
M++ N PD VT + ++ V+ GR
Sbjct: 242 EMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGR-VS 300
Query: 357 DAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLM 416
+A E++ KG K +VK +CA G + A EME+KG N YN L+
Sbjct: 301 EALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLI 360
Query: 417 DAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLK 476
+C ++ A F +MK ++ ATFN L+ S + +L MQD
Sbjct: 361 AGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTV 420
Query: 477 PTA--NSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKA 534
A + Y C+I + ++ + D A + LKM+K+ + S+ + + G +
Sbjct: 421 HGARIDPYNCVIYGFYKENRWED-ALEFLLKMEKLFPRAVDRSFKLI--SLCEKGGMDDL 477
Query: 535 YVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDG 594
A++ M EG PSI L+ + + G + +++ M++ TFN ++ G
Sbjct: 478 KTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIG 537
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
F KQ + M + + + G P +YN L+ G K L M ++ PD
Sbjct: 538 FCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPD 597
Query: 655 SVTYSTMIY 663
+S++++
Sbjct: 598 PSMWSSLMF 606
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 144/344 (41%), Gaps = 11/344 (3%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESM-EKDNIRPDHVTCSIMVTVMRKLGRS--AKDAWYFF 362
Y A L R++ +++ + M + + PD +I VT++R GR+ K
Sbjct: 79 YRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDD---AIFVTIIRGFGRARLIKRVISVV 135
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
+ +++ G+K S +V +I+ E + +M G+ + Y LM +
Sbjct: 136 DLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLT 195
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY 482
N + + L MK V P A +N L+HA + + +L++EM++ P ++
Sbjct: 196 NRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTF 251
Query: 483 TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ 542
LISAY ++K+ K +G P + T ++ G +A E ++
Sbjct: 252 NILISAYCNEQKLIQSMV-LLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVE 310
Query: 543 REGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYM 602
+G K + TL+ G+ G + + + M + T+N+L+ G+ G
Sbjct: 311 SKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLD 370
Query: 603 EARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
A D ++ + T+N L+ + GG+ ++L+ M
Sbjct: 371 SALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM 414
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 148/338 (43%), Gaps = 37/338 (10%)
Query: 279 GRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDH 338
G+AG DK + +F + S R + N I+ L+ G E A ++ + +RP+
Sbjct: 127 GKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNS 186
Query: 339 VTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQS 398
V+ +I++ F +K + W A K F
Sbjct: 187 VSFNILIK-------------GFLDKCD-----WE-----AACKVF-------------D 210
Query: 399 EMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRM 458
EM + V + + YN+L+ C+++ + +A+ L +M K ++P A TF +LM +
Sbjct: 211 EMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKG 270
Query: 459 QPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSY 518
+ + L+ +M+ G KP +Y L+S G++ ++ D A +MKK IKP Y
Sbjct: 271 EYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRI-DEAKLLLGEMKKRRIKPDVVIY 329
Query: 519 TALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMS 578
L++ +AY MQ +G KP+ TY ++DGF R D + + + M++
Sbjct: 330 NILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLA 389
Query: 579 EKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
+ T TF +V G K G A V+ GK L
Sbjct: 390 SRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 143/343 (41%), Gaps = 2/343 (0%)
Query: 320 EDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGA 379
E+A ++ ++ R D+ + S ++ + K R+ + + V+ E +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAK-SRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
+++ + G V +A+ + ++ NTL++ + +E+A+ F K
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
++P + +FNIL+ + + + + EM ++ ++P+ +Y LI R M A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGK-A 240
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
M K I+P + ++ L+ G + +A +M+ G KP + Y L+
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 560 FRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPT 619
+ G + M +++ V +NILV+ + + EA V++E G P
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPN 360
Query: 620 VMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
TY M+++ + R +L M A P T+ M+
Sbjct: 361 AATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMV 403
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 2/252 (0%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
+N I G L +E A KV++ M + ++P VT + ++ + + K A E M
Sbjct: 189 FNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGK-AKSLLEDM 247
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
+K ++ + G ++K C +G + A + +ME +G + Y LM K +
Sbjct: 248 IKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRI 307
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
+EA+ L EMK + +KP +NIL++ + +L EMQ G KP A +Y +
Sbjct: 308 DEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMM 367
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
I + R + D + M PT ++ ++ G + A E M ++
Sbjct: 368 IDGFCRIEDF-DSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKN 426
Query: 546 IKPSIETYTTLL 557
+ + LL
Sbjct: 427 LSFGSGAWQNLL 438
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 123/254 (48%), Gaps = 6/254 (2%)
Query: 414 TLMDAFCKSNHVEEAEGLFVEMKA----KNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
L+DA CK HV EA +++E N P+ FNIL++ + R + K E L E
Sbjct: 217 VLLDALCKEGHVREA-SMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEE 275
Query: 470 MQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG 529
M+ + +KPT +Y LI Y R +++ +A + +MK ++ + +I +G
Sbjct: 276 MKAMNVKPTVVTYGTLIEGYCRMRRVQ-IAMEVLEEMKMAEMEINFMVFNPIIDGLGEAG 334
Query: 530 WHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFN 589
+A E P+I TY +L+ F +AGD KI K+MM+ V+ T T+N
Sbjct: 335 RLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Query: 590 ILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAAL 649
F+K + E ++ + + G P +TY++++ G+ S Q+ KEM
Sbjct: 395 HFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNR 454
Query: 650 NLKPDSVTYSTMIY 663
+ PD +T + +I+
Sbjct: 455 GIDPDLLTTTMLIH 468
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 146/333 (43%), Gaps = 14/333 (4%)
Query: 255 FQWMRAQEP---SLVTPRACTVLFPLLGRAG-MGDKLMVLFR--NLPSSKKFRDVHIYNA 308
F++ R+ EP S R VL L + G + + M L R S V I+N
Sbjct: 196 FEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNI 255
Query: 309 AISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRK 368
++G + + A K++E M+ N++P VT ++ ++ R + A E+M
Sbjct: 256 LLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRM-RRVQIAMEVLEEMKMA 314
Query: 369 GVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA---IVYNTLMDAFCKSNHV 425
++ + V I+ G +S AL + ME+ V + + YN+L+ FCK+ +
Sbjct: 315 EMEINFMVFNPIIDGLGEAGRLSEALGM---MERFFVCESGPTIVTYNSLVKNFCKAGDL 371
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
A + M + V PT T+N +S+ + + NL ++ + G P +Y +
Sbjct: 372 PGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLI 431
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
+ K+S +A +MK GI P + T LIH E+A+ F+N R G
Sbjct: 432 LKMLCEDGKLS-LAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRG 490
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMS 578
I P T+ + +G R G + ++ LM S
Sbjct: 491 IIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSS 523
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 161/354 (45%), Gaps = 28/354 (7%)
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
++ G++ S E++ A+ + ++ ++ +EM K G + ++++++++ CK+
Sbjct: 92 LDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEM-KPGFTLSPSLFDSVVNSLCKARE 150
Query: 425 VEEAEGLFVEM----KAKNVKPTAATFNILMHAYSRR--MQPKIVENLLAEMQDIGLKPT 478
E A L + + N+ +A TF +L+ Y+R +Q I A +P
Sbjct: 151 FEIAWSLVFDRVRSDEGSNLV-SADTFIVLIRRYARAGMVQQAIRAFEFAR----SYEPV 205
Query: 479 ANSYT------CLISAYGRQKKMSDMAADAFLKMKKVGIK------PTSHSYTALIHAYS 526
S T L+ A ++ + + A + ++++G P+ + L++ +
Sbjct: 206 CKSATELRLLEVLLDALCKEGHVRE----ASMYLERIGGTMDSNWVPSVRIFNILLNGWF 261
Query: 527 VSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKV 586
S ++A +E M+ +KP++ TY TL++G+ R Q M++ + M ++E +
Sbjct: 262 RSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFM 321
Query: 587 TFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
FN ++DG + G+ EA ++ F PT++TYN L+ + + G ++LK M
Sbjct: 322 VFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMM 381
Query: 647 AALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKLRAIL 700
+ P + TY+ + ++I++G D +Y + +L
Sbjct: 382 MTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKML 435
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 156/354 (44%), Gaps = 15/354 (4%)
Query: 343 IMVTVMRKLG-----RSAKDAWYFFEKMN-RKGVKWSEEVLGAIVKSFCAEGLVSRALII 396
++V ++R L R AK A+ FF ++ + + ++K F G +
Sbjct: 115 VLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRL 174
Query: 397 QSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR 456
EM K G + A +N L+ ++ + F++ K N +P ++N ++H+
Sbjct: 175 IDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLG 234
Query: 457 RMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSH 516
Q K+++ + +M + G P +Y ++ A R K +D +M K G P +
Sbjct: 235 VKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGK-TDRLYRLLDEMVKDGFSPDLY 293
Query: 517 SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM 576
+Y L+H + A +M+ G++P + +TTL+DG RAG ++ K
Sbjct: 294 TYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGK----LEACKYF 349
Query: 577 MSEKVE-GTK---VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
M E V+ G V + +++ G+ G+ +A ++ E + G P V TYN ++ +
Sbjct: 350 MDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCM 409
Query: 633 GGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQ 686
G+ + LLKEM + P+ V YST++ K M++ G
Sbjct: 410 AGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGH 463
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 132/298 (44%), Gaps = 8/298 (2%)
Query: 316 CGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEE 375
CG Y+ ++ + M KD T ++++ + G A+D F K + +
Sbjct: 165 CGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGL-ARDVVEQFIKSKTFNYRPYKH 223
Query: 376 VLGAIVKSFCAEGLVSRALI--IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFV 433
AI+ S G+ LI + +M + G + + YN +M A + + L
Sbjct: 224 SYNAILHSLL--GVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLD 281
Query: 434 EMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQK 493
EM P T+NIL+H + +P NLL M+++G++P +T LI R
Sbjct: 282 EMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAG 341
Query: 494 KMSDMAADAFL-KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIET 552
K+ A F+ + KVG P YT +I Y G EKA F+ M +G P++ T
Sbjct: 342 KLE--ACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFT 399
Query: 553 YTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE 610
Y +++ GF AG + + K M S V ++ LV+ G+ +EA +V+ +
Sbjct: 400 YNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKD 457
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 124/312 (39%), Gaps = 39/312 (12%)
Query: 270 ACT--VLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYE 327
ACT +L G AG+ ++ F + H YNA + LL +Y+ VYE
Sbjct: 187 ACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYE 246
Query: 328 SMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAE 387
M +D PD +T +I++ +LG++
Sbjct: 247 QMLEDGFTPDVLTYNIVMFANFRLGKT--------------------------------- 273
Query: 388 GLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATF 447
R + EM K G + YN L+ N A L M+ V+P F
Sbjct: 274 ---DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHF 330
Query: 448 NILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMK 507
L+ SR + + + + E +G P YT +I+ Y ++ + A + F +M
Sbjct: 331 TTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGEL-EKAEEMFKEMT 389
Query: 508 KVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQ 567
+ G P +Y ++I + ++G ++A + M+ G P+ Y+TL++ + AG
Sbjct: 390 EKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVL 449
Query: 568 TMMKIWKLMMSE 579
++ K M+ +
Sbjct: 450 EAHEVVKDMVEK 461
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 203/479 (42%), Gaps = 45/479 (9%)
Query: 219 LEEALAQYGERVSEKECWEVL-EVLGKERLLVCCLYFFQWMRAQEPSLVTPRACTVLFPL 277
+E+AL+ + ER+S KE +L E + ER + F+W +++ + ++ +
Sbjct: 141 VEDALSPWAERLSNKERTIILKEQIHWER----AVEIFEWFKSKGCYELNVIHYNIMLRI 196
Query: 278 LGRAGMGDKLMVLFRNLPSSKKFRDVH-IYNAAISGLLCCGRYEDAWKVYESMEKDNIRP 336
LG+A + L+ + K + ++ Y I G A M K ++P
Sbjct: 197 LGKACKWRYVQSLWDEMI-RKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQP 255
Query: 337 DHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALII 396
D VT I++ + +K R + A FF+ KWS C E + +
Sbjct: 256 DEVTTGIVLQMYKK-AREFQKAEEFFK-------KWS-----------CDENKADSHVCL 296
Query: 397 QSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR 456
S YNT++D + KS ++EA F M + + PT TFN ++H Y
Sbjct: 297 SS-----------YTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN 345
Query: 457 RMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSH 516
Q V +L+ M+ + P +Y LIS + + + + A F +MK G+KP
Sbjct: 346 NGQLGEVTSLMKTMK-LHCAPDTRTYNILISLHTKNNDI-ERAGAYFKEMKDDGLKPDPV 403
Query: 517 SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM 576
SY L++A+S+ E+A M + ++ T + L R + + + K W
Sbjct: 404 SYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALT---RMYVEAEMLEKSWSWF 460
Query: 577 MSEKVEGTKVT--FNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGG 634
V G + ++ +D + ++G EA V ++ TV+ YN+++ AY
Sbjct: 461 KRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISK 519
Query: 635 QHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSY 693
K +L + M + + PD TY+T++ Y ++M ++G V D Y
Sbjct: 520 SCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPY 578
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 165/382 (43%), Gaps = 47/382 (12%)
Query: 320 EDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGA 379
E+A + M+ DN+ D T S + T M + +W +F++ + G S E A
Sbjct: 419 EEAEGLIAEMDDDNVEIDEYTQSAL-TRMYVEAEMLEKSWSWFKRFHVAG-NMSSEGYSA 476
Query: 380 IVKSFCAEGLVS---RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
+ ++ G +S R I E+ K+ V I YN ++ A+ S E+A LF M
Sbjct: 477 NIDAYGERGYLSEAERVFICCQEVNKRTV----IEYNVMIKAYGISKSCEKACELFESMM 532
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMS 496
+ V P T+N L+ + P L +M++ G Y +IS++ + ++
Sbjct: 533 SYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQL- 591
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
+MA + + +M + I+P Y LI+A++ +G ++A E M+ GI + Y +L
Sbjct: 592 NMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSL 651
Query: 557 LDGFRRAGDTQTMMKIWKLM-------------------------------------MSE 579
+ + + G I++ + M +
Sbjct: 652 IKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQ 711
Query: 580 KVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKL 639
+ E + TF +++ + K G++ EA + + ++ + ++YN ++ +A G+ +
Sbjct: 712 RGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEA 771
Query: 640 PQLLKEMAALNLKPDSVTYSTM 661
+ KEM + ++PD T+ ++
Sbjct: 772 VETFKEMVSSGIQPDDSTFKSL 793
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 128/301 (42%), Gaps = 53/301 (17%)
Query: 266 VTPRACT--VLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAW 323
VTP CT L +L A M K + + D Y A IS + G+ A
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595
Query: 324 KVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKS 383
+VY+ M + NI PD V V G ++ +
Sbjct: 596 EVYKEMVEYNIEPDVV------------------------------------VYGVLINA 619
Query: 384 FCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLF---VEMKAKNV 440
F G V +A+ M++ G+ N+++YN+L+ + K +++EAE ++ ++ K
Sbjct: 620 FADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQ 679
Query: 441 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYT-----CLISAYGRQKKM 495
P T N +++ YS R + E + M+ G AN +T C+ GR ++
Sbjct: 680 YPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG---EANEFTFAMMLCMYKKNGRFEEA 736
Query: 496 SDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTT 555
+ +A +M+++ I SY +++ +++ G ++A F+ M GI+P T+ +
Sbjct: 737 TQIAK----QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKS 792
Query: 556 L 556
L
Sbjct: 793 L 793
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 505 KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAG 564
+M + GIKP + +Y LI YS G A M + G++P T +L +++A
Sbjct: 212 EMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAR 271
Query: 565 DTQTMMKIWKLMMSEKVEG------TKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP 618
+ Q + +K ++ + + T+N ++D + K GQ EA + + G+ P
Sbjct: 272 EFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVP 331
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYH 678
T +T+N +++ Y GQ ++ L+K M L+ PD+ TY+ +I Y
Sbjct: 332 TTVTFNTMIHIYGNNGQLGEVTSLMKTMK-LHCAPDTRTYNILISLHTKNNDIERAGAYF 390
Query: 679 KQMIKSGQVMDVDSYQKL 696
K+M G D SY+ L
Sbjct: 391 KEMKDDGLKPDPVSYRTL 408
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 177/380 (46%), Gaps = 13/380 (3%)
Query: 271 CTVLFPLLGRAGMGDKLMVLFRNLPSSKKFR---DVHIYNAAISGLLCCGRYEDAWKVYE 327
C++++ + + M + + VL + ++K D + +A ISG G+ E A +E
Sbjct: 138 CSLIYRFVEKGEMDNAIEVL--EMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFE 195
Query: 328 S-MEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCA 386
S ++ + P+ VT + +V+ + +LG+ + ++ +G ++ + +
Sbjct: 196 SAVDSGVLVPNLVTYTTLVSALCQLGK-VDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFK 254
Query: 387 EGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAAT 446
G + AL+ EM +KG+ + + Y+ L+D K +VEEA GL +M + V+P T
Sbjct: 255 GGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLIT 314
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
+ ++ + + + L + +G++ Y LI R+ + + A M
Sbjct: 315 YTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNL-NRAFSMLGDM 373
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
++ GI+P+ +Y +I+ ++G +A + +G+ + TY+TLLD + + +
Sbjct: 374 EQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNI 428
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
+++I + + K+ V NIL+ F G Y EA + ++ L P TY +
Sbjct: 429 DAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATM 488
Query: 627 MNAYARGGQHSKLPQLLKEM 646
+ Y + GQ + ++ E+
Sbjct: 489 IKGYCKTGQIEEALEMFNEL 508
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 161/366 (43%), Gaps = 15/366 (4%)
Query: 304 HIYNAAISGLLCCGRYEDAWKVYE-SMEKDNIRP-DHVTCSIMVTVMRKLGRSAKDAWYF 361
IY+ L RYEDA K + K +I P H+ S++ +K
Sbjct: 62 RIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLIL 121
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGV---FSNAIVYNTLMDA 418
+ + G S +++ F +G + A+ + M K V F N V + ++
Sbjct: 122 RDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDN-FVCSAVISG 180
Query: 419 FCKSNHVEEAEGLFVEMKAKNV-KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKP 477
FCK E A G F V P T+ L+ A + + V +L+ ++D G +
Sbjct: 181 FCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEF 240
Query: 478 TANSYTCLISAYGRQKKMSD-MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYV 536
Y+ I Y + + D + D +M + G+ SY+ LI S G E+A
Sbjct: 241 DCVFYSNWIHGYFKGGALVDALMQDR--EMVEKGMNRDVVSYSILIDGLSKEGNVEEALG 298
Query: 537 AFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFA 596
M +EG++P++ TYT ++ G + G + ++ ++S +E + + L+DG
Sbjct: 299 LLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGIC 358
Query: 597 KQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSV 656
++G A ++ + + G+ P+++TYN ++N G+ S+ ++ K + D +
Sbjct: 359 RKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG-----DVI 413
Query: 657 TYSTMI 662
TYST++
Sbjct: 414 TYSTLL 419
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/438 (20%), Positives = 180/438 (41%), Gaps = 45/438 (10%)
Query: 259 RAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
R +PS++T + GR D++ S DV Y+ + +
Sbjct: 376 RGIQPSILTYNTVINGLCMAGRVSEADEV--------SKGVVGDVITYSTLLDSYIKVQN 427
Query: 319 YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAK-DAWYFFEKMNRKGVKWSEEVL 377
+ ++ + I D V C+I++ +G + DA Y M +
Sbjct: 428 IDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALY--RAMPEMDLTPDTATY 485
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
++K +C G + AL + +E+ K V S A+ YN ++DA CK ++ A + +E+
Sbjct: 486 ATMIKGYCKTGQIEEALEMFNELRKSSV-SAAVCYNRIIDALCKKGMLDTATEVLIELWE 544
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDI------GLKPTA-------NSYTC 484
K + T L+H+ K + L+ ++ + G+ A S+
Sbjct: 545 KGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEA 604
Query: 485 LISAYG--RQKKMSDM--------------AADAFLKMKKVGIKPTSH----SYTALIHA 524
I Y R+K ++ + DA+L + G S YT +I+
Sbjct: 605 AIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIING 664
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
G+ KA + G+ + TY +L++G + G ++++ + + + +
Sbjct: 665 LCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPS 724
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
+VT+ IL+D K+G +++A ++ GL P ++ YN +++ Y + GQ +++
Sbjct: 725 EVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVS 784
Query: 645 EMAALNLKPDSVTYSTMI 662
+ PD+ T S+MI
Sbjct: 785 RKMMGRVTPDAFTVSSMI 802
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/431 (19%), Positives = 167/431 (38%), Gaps = 72/431 (16%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D ++ + R +K D+ + N + L G Y +A +Y +M + ++ PD T + M
Sbjct: 429 DAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATM 488
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLV-------------- 390
+ K G+ ++A F ++ + V + I+ + C +G++
Sbjct: 489 IKGYCKTGQ-IEEALEMFNELRKSSVS-AAVCYNRIIDALCKKGMLDTATEVLIELWEKG 546
Query: 391 -------SRALI--IQSEMEKKGVF---------SNAIVYNTLMDA---FCKSNHVEEAE 429
SR L+ I + KG+ ++ + L DA CK E A
Sbjct: 547 LYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAI 606
Query: 430 GLFVEMKAKNVKPT----------------------------------AATFNILMHAYS 455
+++ M+ K + T + I+++
Sbjct: 607 EVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLC 666
Query: 456 RRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTS 515
+ NL + + G+ +Y LI+ +Q + + A F ++ +G+ P+
Sbjct: 667 KEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVE-ALRLFDSLENIGLVPSE 725
Query: 516 HSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKL 575
+Y LI G A ++M +G+ P+I Y +++DG+ + G T+ M++
Sbjct: 726 VTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSR 785
Query: 576 MMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQ 635
M +V T + ++ G+ K+G EA V +EF + + L+ + G+
Sbjct: 786 KMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGR 845
Query: 636 HSKLPQLLKEM 646
+ LL+EM
Sbjct: 846 MEEARGLLREM 856
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 5/198 (2%)
Query: 504 LKMKKVGIKPTSHSYTALIHAYSVS--GWHEKAYVAFENMQREGIKPSIETYTTLLDGFR 561
+ + K I P +H +LIH +S++ + + + ++ G PS T+ +L+ F
Sbjct: 86 IHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFV 145
Query: 562 RAGDTQTMMKIWKLMMSEKVEGTKVTF--NILVDGFAKQGQYMEARDVISEFGKIG-LHP 618
G+ +++ ++M ++ V F + ++ GF K G+ A G L P
Sbjct: 146 EKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVP 205
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYH 678
++TY L++A + G+ ++ L++ + + D V YS I+
Sbjct: 206 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD 265
Query: 679 KQMIKSGQVMDVDSYQKL 696
++M++ G DV SY L
Sbjct: 266 REMVEKGMNRDVVSYSIL 283
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 165/369 (44%), Gaps = 13/369 (3%)
Query: 298 KKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKD 357
+ F + + A + + G +++A V ++ + D C+ ++ M + G+
Sbjct: 141 RSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGM- 199
Query: 358 AWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMD 417
F+++ + G+ +E +VK+ C +G + A ++ +E + VF Y T ++
Sbjct: 200 LMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL--IENESVFG----YKTFIN 253
Query: 418 AFCKSNHVEEAEGLFVEMKAKNV---KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIG 474
C + E+A L +E+ + A +++ + M+ K E+++ EM++IG
Sbjct: 254 GLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIG 313
Query: 475 LKPTANSYTCLISAYGRQKKMSDMAADAFL-KMKKVGIKPTSHSYTALIHAYSVSGWHEK 533
+ Y CL K M+ A FL KM G+K + ++ Y +
Sbjct: 314 F--GLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLE 371
Query: 534 AYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVD 593
A F+ + I Y D + G + ++ + M + + + L+D
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLID 431
Query: 594 GFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKP 653
G+ QG+ ++A D+I E G+ P ++TYN+L++ AR G ++ ++ + M A KP
Sbjct: 432 GYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKP 491
Query: 654 DSVTYSTMI 662
++VT S +I
Sbjct: 492 NAVTNSVII 500
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 132/312 (42%), Gaps = 59/312 (18%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ YN +SGL G E+ ++YE M+ + +P+ VT S+++ + R K+A F
Sbjct: 457 DLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGL-CFARKVKEAEDF 515
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRA----------------------LIIQSE 399
F + +K E + VK +C GL +A L I+
Sbjct: 516 FSSLEQK----CPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGY 571
Query: 400 MEKK-GVFSNAIVYNT---------LMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
+EK V Y ++ AFCK N+V EA+ LF M + + P T+ I
Sbjct: 572 LEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTI 631
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY-----------------GRQ 492
++H Y R + + E+L +M+ G+KP +YT L+ Y G++
Sbjct: 632 MIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKR 691
Query: 493 KKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIET 552
K A++ + GI YT LI E+A F+ M G++P +
Sbjct: 692 K-----ASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVA 746
Query: 553 YTTLLDGFRRAG 564
YTTL+ + R G
Sbjct: 747 YTTLISSYFRKG 758
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 176/422 (41%), Gaps = 55/422 (13%)
Query: 293 NLPSSKKFRDVHI-----YNAAISGLL--CCGRYE---DAWKVYESMEKDNIRPDHVTCS 342
NLP + F D + N I L+ C + + +A + ++ NI D V +
Sbjct: 333 NLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYN 392
Query: 343 IMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEK 402
+ + KLGR ++A+ ++M +G+ ++ +C +G V AL + EM
Sbjct: 393 VAFDALSKLGR-VEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIG 451
Query: 403 KGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKI 462
G+ + I YN L+ ++ H EE ++ MKA+ KP A T ++++ + K
Sbjct: 452 NGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKE 511
Query: 463 VENLLAEMQ---------------DIGLKPTANSYTCLIS-AYGRQKKMS---------- 496
E+ + ++ + GL A Y + Y +K +
Sbjct: 512 AEDFFSSLEQKCPENKASFVKGYCEAGLSKKA--YKAFVRLEYPLRKSVYIKLFFSLCIE 569
Query: 497 ---DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETY 553
+ A D KM ++P +I A+ +A V F+ M G+ P + TY
Sbjct: 570 GYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTY 629
Query: 554 TTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAK-----------QGQY- 601
T ++ + R + Q +++ M ++ VT+ +L+D + K QG+
Sbjct: 630 TIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVG 689
Query: 602 -MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
+A +V+ EF G+ V+ Y +L++ + + +L M L+PD V Y+T
Sbjct: 690 KRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTT 749
Query: 661 MI 662
+I
Sbjct: 750 LI 751
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 176/414 (42%), Gaps = 18/414 (4%)
Query: 206 IVQLARNLPENLTLEEALAQYGERVSEKE-CWEVLEVLGKERLLVCCLYFFQ------WM 258
+V+L +N T+ + + GE+ EK+ + ++ V G L F +
Sbjct: 112 LVELIKNEERGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQ 171
Query: 259 RAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
+ +V +AC L + G LM LF+ L + + Y + L G
Sbjct: 172 SKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGN 231
Query: 319 YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSE--EV 376
E+A + +E +++ + + G + K E ++RK + + V
Sbjct: 232 LEEAAMLL--IENESV----FGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAV 285
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
LG +V+ FC E + A + EME+ G + ++D +CK+ ++ EA G +M
Sbjct: 286 LGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKML 345
Query: 437 AKNVKPTAATFNILMHAYSR-RMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
K +K ++++ Y + M + +E E +D+ + Y A + ++
Sbjct: 346 GKGLKVNCVIVSLILQCYCKMDMCLEALEKF-KEFRDMNIFLDRVCYNVAFDALSKLGRV 404
Query: 496 SDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTT 555
+ A + +MK GI P +YT LI Y + G A + M G+ P + TY
Sbjct: 405 EE-AFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNV 463
Query: 556 LLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVIS 609
L+ G R G + +++I++ M +E + VT +++++G + EA D S
Sbjct: 464 LVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFS 517
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 176/391 (45%), Gaps = 17/391 (4%)
Query: 303 VHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFF 362
V IY++ I L GR +A + + M + I+PD + IM+ + GR +A
Sbjct: 582 VAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGR-IDEANELV 640
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
E++ + ++ S ++ F G++ + +M + G+ N ++Y L+ F K
Sbjct: 641 EEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKK 700
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE-------MQDIGL 475
+ + LF M ++K + L+ R M K ++ E + I
Sbjct: 701 GDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRT 760
Query: 476 KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
KP + + L YG + A + K+KK I P + + +I Y +G ++AY
Sbjct: 761 KPLVSIPSSL-GNYGSKS----FAMEVIGKVKK-SIIPNLYLHNTIITGYCAAGRLDEAY 814
Query: 536 VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGF 595
E+MQ+EGI P++ TYT L+ AGD ++ + +++ E +V ++ L+ G
Sbjct: 815 NHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGL 871
Query: 596 AKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDS 655
+ ++A ++ E K G++P +Y L+ + +++K+MAAL++ P S
Sbjct: 872 CDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRS 931
Query: 656 VTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQ 686
+ ++ +IY M++SG+
Sbjct: 932 INHTWLIYILCEEKKLREARALFAIMVQSGR 962
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 164/395 (41%), Gaps = 30/395 (7%)
Query: 280 RAGMGDKLMVLFRNLPSSKKF-RDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDH 338
+ G D + LF N S+ R+VH Y I G G + A + M + I PDH
Sbjct: 354 KEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDH 413
Query: 339 VT----------------------------CSIMVTVMRKLGRSAKDAWYFFEKMNRKGV 370
+T C I V+ LG ++ RK
Sbjct: 414 ITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDA 473
Query: 371 KWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEG 430
+ L + + C++ AL +M G YN+++ + N +E+
Sbjct: 474 NLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLAS 533
Query: 431 LFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYG 490
L ++ + P T+ I+++ ++ ++ M+++GL+PT Y+ +I + G
Sbjct: 534 LVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLG 593
Query: 491 RQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSI 550
+Q ++ + A + F KM + GI+P +Y +I+ Y+ +G ++A E + + ++PS
Sbjct: 594 KQGRVVE-AEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSS 652
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE 610
TYT L+ GF + G + + M+ + + V + L+ F K+G + + +
Sbjct: 653 FTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGL 712
Query: 611 FGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 645
G+ + + Y L++ R K Q++ E
Sbjct: 713 MGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVE 747
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/390 (17%), Positives = 162/390 (41%), Gaps = 30/390 (7%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D I+N I G + G + ++ M K ++ + T IM+ K G F
Sbjct: 306 DPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF 365
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVY--------- 412
+ + + ++ F +G + +A+ + M G+ + I Y
Sbjct: 366 VNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPK 425
Query: 413 -----------NTLMDAFCKSN--------HVE-EAEGLFVEMKAKNVKPTAATFNILMH 452
+++D C N ++E + E L E+ K+ A ++
Sbjct: 426 CHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTT 485
Query: 453 AYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIK 512
A + + + +M ++G P SY +I ++ + D+A+ + ++++
Sbjct: 486 ALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI-IQELDFV 544
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI 572
P +Y +++ + A+ + M+ G++P++ Y++++ + G +
Sbjct: 545 PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEET 604
Query: 573 WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
+ M+ ++ ++ + I+++ +A+ G+ EA +++ E K L P+ TY +L++ + +
Sbjct: 605 FAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVK 664
Query: 633 GGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
G K Q L +M L P+ V Y+ +I
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 117/309 (37%), Gaps = 31/309 (10%)
Query: 384 FCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPT 443
FC G + A + ME G + + ++Y LM +CK N++ A L++ M ++ +
Sbjct: 247 FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELD 306
Query: 444 AATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAF 503
FN L+H + + + ++M G++ +Y +I +Y ++ + D A F
Sbjct: 307 PCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNV-DYALRLF 365
Query: 504 L-KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR 562
+ I H YT LI + G +KA M GI P TY LL +
Sbjct: 366 VNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPK 425
Query: 563 AGDTQTMMKIWKLMMSE-----------------KVEG------------TKVTFNILVD 593
+ + M I + ++ KVE V ++
Sbjct: 426 CHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTT 485
Query: 594 GFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKP 653
Q Y+ A I + +G P +YN ++ + L L+ + L+ P
Sbjct: 486 ALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVP 545
Query: 654 DSVTYSTMI 662
D TY ++
Sbjct: 546 DVDTYLIVV 554
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 132/330 (40%), Gaps = 43/330 (13%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D + ++ + L+ R+++A + + P + S++V + R +A++
Sbjct: 130 DSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFL-EAFHC 188
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSE---MEKKGVFSNAIVYNTLMDA 418
FE++ +G + K C G ++ A+ + M + + N +Y +L
Sbjct: 189 FEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVN--LYKSLFYC 246
Query: 419 FCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPT 478
FCK EAE LF M+ G
Sbjct: 247 FCKRGCAAEAEALFDHMEVD-----------------------------------GYYVD 271
Query: 479 ANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF 538
YTCL+ Y + M+ MA +L+M + + + LIH + G +K V F
Sbjct: 272 KVMYTCLMKEYCKDNNMT-MAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMF 330
Query: 539 ENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIW-KLMMSEKVEGTKVTFNILVDGFAK 597
M ++G++ ++ TY ++ + + G+ ++++ SE + + L+ GF K
Sbjct: 331 SQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYK 390
Query: 598 QGQYMEARDVISEFGKIGLHPTVMTYNMLM 627
+G +A D++ G+ P +TY +L+
Sbjct: 391 KGGMDKAVDLLMRMLDNGIVPDHITYFVLL 420
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%)
Query: 518 YTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMM 577
Y +L + + G +A F++M+ +G YT L+ + + + M+++ M+
Sbjct: 240 YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV 299
Query: 578 SEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQ 635
E FN L+ GF K G + R + S+ K G+ V TY++++ +Y + G
Sbjct: 300 ERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGN 357
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
+++++N I+G GR ++A+ ESM+K+ I P+ VT +I++ + G + A
Sbjct: 793 NLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAG-DIESAIDL 851
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
FE N + + + ++K C AL + EM+K G+ N Y L+ C
Sbjct: 852 FEGTN---CEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCY 908
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIG 474
S EA + +M A ++ P + L++ + + L A M G
Sbjct: 909 SRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 166/375 (44%), Gaps = 18/375 (4%)
Query: 334 IRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRA 393
IR D T M+ ++ ++ + A M KGV W E++ +++S+ G+V +
Sbjct: 146 IRHDRDTHMKMIKMLGEVSK-LNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQES 204
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA 453
+ I +M+ GV YN+L + A+ F +M ++ V+PT T+N+++
Sbjct: 205 VKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWG 264
Query: 454 YSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKP 513
+ ++ + +M+ G+ P ++ +I+ + R KKM D A F++MK I P
Sbjct: 265 FFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKM-DEAEKLFVEMKGNKIGP 323
Query: 514 TSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIW 573
+ SYT +I Y + FE M+ GI+P+ TY+TLL G AG I
Sbjct: 324 SVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNIL 383
Query: 574 KLMMSEKV--EGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYA 631
K MM++ + + + +LV +K G A +V+ + + Y +L+
Sbjct: 384 KNMMAKHIAPKDNSIFLKLLVSQ-SKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQC 442
Query: 632 RGGQHSKLPQL----------LKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQM 681
+ +++ +L L+ L ++P + Y+ +I +Q+
Sbjct: 443 KASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSA--YNPIIEYLCNNGQTAKAEVLFRQL 500
Query: 682 IKSGQVMDVDSYQKL 696
+K G V D D+ L
Sbjct: 501 MKRG-VQDQDALNNL 514
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/402 (20%), Positives = 164/402 (40%), Gaps = 18/402 (4%)
Query: 273 VLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKD 332
VL G+AG+ + + +F+ + R + YN+ +L GRY A + + M +
Sbjct: 190 VLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSE 249
Query: 333 NIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSR 392
+ P T ++M+ L + A FFE M +G+ + ++ FC +
Sbjct: 250 GVEPTRHTYNLMLWGFF-LSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDE 308
Query: 393 ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMH 452
A + EM+ + + + Y T++ + + V++ +F EM++ ++P A T++ L+
Sbjct: 309 AEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLP 368
Query: 453 AYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA--DAFLKMKKVG 510
+ +N+L M + P NS + Q K DMAA + M +
Sbjct: 369 GLCDAGKMVEAKNILKNMMAKHIAPKDNS--IFLKLLVSQSKAGDMAAATEVLKAMATLN 426
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGI----------KPSIETYTTLLDGF 560
+ + Y LI + + +A + + + I +PS Y +++
Sbjct: 427 VPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS--AYNPIIEYL 484
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTV 620
G T +++ +M V+ N L+ G AK+G + +++ + G+
Sbjct: 485 CNNGQTAKAEVLFRQLMKRGVQDQDA-LNNLIRGHAKEGNPDSSYEILKIMSRRGVPRES 543
Query: 621 MTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
Y +L+ +Y G+ L M PDS + ++I
Sbjct: 544 NAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVI 585
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 171/376 (45%), Gaps = 15/376 (3%)
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLG--RSAKDAWYFFEKMNRKGVKWSE 374
R++ A K++ + K + C + + LG + A FE M +G+K +
Sbjct: 122 NRWQSALKIFNLLRKQHWYEPR--CKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTI 179
Query: 375 EVLGAIVKSFCAEGLVSRALIIQSEME-----KKGVFSNAIVYNTLMDAFCKSNHVEEAE 429
+V +++ + L+ +A M+ K VF+ + L+ CK + +
Sbjct: 180 DVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFT----FTVLISCCCKLGRFDLVK 235
Query: 430 GLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM-QDIGLKPTANSYTCLISA 488
+ +EM V + T+N ++ Y + + +E++LA+M +D P + +I +
Sbjct: 236 SIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGS 295
Query: 489 YGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKP 548
YG + M M + + + + +G++P ++ LI ++ +G ++K + M++
Sbjct: 296 YGNGRNMRKMES-WYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSL 354
Query: 549 SIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVI 608
+ TY +++ F +AG + M +++ M + V+ +T+ LV+ ++K G ++ V+
Sbjct: 355 TTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVL 414
Query: 609 SEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXX 668
+ + +N ++NAY + G + + +L +M KPD +T++TMI
Sbjct: 415 RQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAH 474
Query: 669 XXXXXXXXYHKQMIKS 684
KQMI S
Sbjct: 475 GIFDAVQELEKQMISS 490
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 171/391 (43%), Gaps = 15/391 (3%)
Query: 233 KECWEVLEVLGKERLLVCCLYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFR 292
K E L+ KE L F +R Q + T LF +LG D+ +LF
Sbjct: 109 KAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFE 168
Query: 293 NLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK----DNIRPDHVTCSIMVTVM 348
+ S + +Y + IS G+ E K + ++E + +PD T +++++
Sbjct: 169 VMLSEGLKPTIDVYTSLISVY---GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCC 225
Query: 349 RKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG-VFS 407
KLGR E M+ GV S I+ + G+ + ++M + G
Sbjct: 226 CKLGRFDLVKSIVLE-MSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLP 284
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
+ N+++ ++ ++ + E + + V+P TFNIL+ ++ + K + +++
Sbjct: 285 DVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVM 344
Query: 468 AEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSV 527
M+ T +Y +I +G+ ++ M D F KMK G+KP S +Y +L++AYS
Sbjct: 345 DFMEKRFFSLTTVTYNIVIETFGKAGRIEKM-DDVFRKMKYQGVKPNSITYCSLVNAYSK 403
Query: 528 SGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVT 587
+G K + + + +++ + +AGD TM +++ M K + K+T
Sbjct: 404 AGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKIT 463
Query: 588 FNILVDGFAKQG-----QYMEARDVISEFGK 613
F ++ + G Q +E + + S+ GK
Sbjct: 464 FATMIKTYTAHGIFDAVQELEKQMISSDIGK 494
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 173/391 (44%), Gaps = 16/391 (4%)
Query: 254 FFQWMRAQ--EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAIS 311
FQ M+ PS++T + + GR GM L R D + +N I+
Sbjct: 160 LFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTP--DSYTFNTLIN 217
Query: 312 GLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVK 371
G ++A+++++ ME + PD VT + ++ + + G+ K A M +K
Sbjct: 218 GFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGK-VKIAHNVLSGMLKKATD 276
Query: 372 WSEEVLG--AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAE 429
V+ +V+ +C + + A+++ +M +G+ NA+ YNTL+ +++ +E +
Sbjct: 277 VHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIK 336
Query: 430 GLFV--EMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYT---- 483
+ + P A TFNIL+ A+ + EM ++ L P + SY+
Sbjct: 337 DILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIR 396
Query: 484 --CLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
C+ + + R + + + + + + K KP + +Y + +G ++A F +
Sbjct: 397 TLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQL 456
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
+ G++ +Y TL+ G R G + ++ LM+ + T+ +L+DG K G+
Sbjct: 457 MKRGVQDP-PSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEA 515
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
+ A D + + P T++ ++ A+
Sbjct: 516 LLAHDTLQRMLRSSYLPVATTFHSVLAELAK 546
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 190/433 (43%), Gaps = 33/433 (7%)
Query: 252 LYFFQWMRAQEPSLVTPRACTVLFPLLGRAG----MGDKLMVLFRNLPSSKKFRDVHIYN 307
L FF W+ + S ++ ++ LGRA + L + R K +D + +N
Sbjct: 85 LRFFDWVSNKGFS-HKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRY-FN 142
Query: 308 AAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNR 367
+ I G ++++ K++++M++ I P +T + +++++ K GR+ A F++M R
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGM-AHDLFDEMRR 201
Query: 368 K-GVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVE 426
GV ++ FC +V A I +ME + + YNT++D C++ V+
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVK 261
Query: 427 EAEGLFVEM--KAKNVKPTAATFNILMHAYSRRMQPKIVENLLA--EMQDIGLKPTANSY 482
A + M KA +V P ++ L+ Y M+ +I E +L +M GLKP A +Y
Sbjct: 262 IAHNVLSGMLKKATDVHPNVVSYTTLVRGYC--MKQEIDEAVLVFHDMLSRGLKPNAVTY 319
Query: 483 TCLI---SAYGRQKKMSDM---AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYV 536
LI S R ++ D+ DAF P + ++ LI A+ +G + A
Sbjct: 320 NTLIKGLSEAHRYDEIKDILIGGNDAF-----TTFAPDACTFNILIKAHCDAGHLDAAMK 374
Query: 537 AFENMQREGIKPSIETYTTLL------DGFRRAGDT-QTMMKIWKLMMSEKVEGTKVTFN 589
F+ M + P +Y+ L+ + F RA + + L+ ++ + +N
Sbjct: 375 VFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYN 434
Query: 590 ILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAAL 649
+ + G+ +A V + K G+ +Y L+ + R G+ +LL M
Sbjct: 435 PMFEYLCANGKTKQAEKVFRQLMKRGVQDPP-SYKTLITGHCREGKFKPAYELLVLMLRR 493
Query: 650 NLKPDSVTYSTMI 662
PD TY +I
Sbjct: 494 EFVPDLETYELLI 506
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 146/360 (40%), Gaps = 13/360 (3%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVM---RKLGRSAKDA 358
D +N I G + A KV++ M + PD + S+++ + + R+
Sbjct: 352 DACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLF 411
Query: 359 WYFFEK---MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
FEK + + K + + CA G +A + ++ K+GV + Y TL
Sbjct: 412 NELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTL 470
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGL 475
+ C+ + A L V M + P T+ +L+ + + + + L M
Sbjct: 471 ITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSY 530
Query: 476 KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
P A ++ +++ ++K ++ L ++K I+ T ++ S EKA+
Sbjct: 531 LPVATTFHSVLAELAKRKFANESFCLVTLMLEK-RIRQNIDLSTQVVRLLFSSAQKEKAF 589
Query: 536 VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKV-TFNILVDG 594
+ + G +E L R+ D T++ L EK + + T N +++G
Sbjct: 590 LIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLV----LFCLEKSQMVDIDTCNTVIEG 645
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
K ++ EA + +E ++G H + + +L NA G+ +L + K MA L D
Sbjct: 646 LCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFVSKRMATLRESDD 705
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA 453
L++ + +E I+YN M F KS +E++E LF EM + +KP ATF ++
Sbjct: 160 LVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISC 219
Query: 454 YSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKP 513
+ PK +M G +P + +I AYGR + DMA + + + +
Sbjct: 220 ARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNV-DMALSLYDRARTEKWRI 278
Query: 514 TSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIW 573
+ +++ LI Y VSG ++ +E M+ G+KP++ Y L+D RA I+
Sbjct: 279 DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIY 338
Query: 574 KLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARG 633
K +++ T+ LV + + +A + E + GL TV+ YN L++ A
Sbjct: 339 KDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADN 398
Query: 634 GQHSKLPQLLKEMAAL-NLKPDSVTYSTMI 662
+ ++ ++M PDS T+S++I
Sbjct: 399 RYVDEAFEIFQDMKNCETCDPDSWTFSSLI 428
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 159/367 (43%), Gaps = 36/367 (9%)
Query: 288 MVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTV 347
+VL L + K R+V +YN + E + K+++ M + I+PD+ T + +++
Sbjct: 160 LVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISC 219
Query: 348 MRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFS 407
R+ G K A +FEKM+ G + + A++ ++ G V AL + +
Sbjct: 220 ARQNG-VPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRI 278
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
+A+ ++TL+ + S + + ++ EMKA VKP +N L+ + R +P + +
Sbjct: 279 DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIY 338
Query: 468 AEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSV 527
++ G P ++Y L+ AYGR + D A + +MK+ G+ T Y L+ +
Sbjct: 339 KDLITNGFTPNWSTYAALVRAYGRARYGDDALA-IYREMKEKGLSLTVILYNTLLSMCAD 397
Query: 528 SGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVT 587
+ + ++A+ F++M+ E + T
Sbjct: 398 NRYVDEAFEIFQDMKN----------------------------------CETCDPDSWT 423
Query: 588 FNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMA 647
F+ L+ +A G+ EA + + + G PT+ ++ Y + Q + + ++
Sbjct: 424 FSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVL 483
Query: 648 ALNLKPD 654
L + PD
Sbjct: 484 ELGITPD 490
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 12/266 (4%)
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
EP VT A + GRAG D + L+ + K D ++ I G Y+
Sbjct: 242 EPDNVTMAA---MIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDG 298
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAW---YFFEKMNRKGVKWSEEVLG 378
+YE M+ ++P+ V I ++ +GR AK W ++ + G +
Sbjct: 299 CLNIYEEMKALGVKPNLV---IYNRLIDSMGR-AKRPWQAKIIYKDLITNGFTPNWSTYA 354
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK-A 437
A+V+++ AL I EM++KG+ I+YNTL+ + +V+EA +F +MK
Sbjct: 355 ALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNC 414
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
+ P + TF+ L+ Y+ + E L +M++ G +PT T +I YG+ K++ D
Sbjct: 415 ETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDD 474
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIH 523
+ F ++ ++GI P L++
Sbjct: 475 VVR-TFDQVLELGITPDDRFCGCLLN 499
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 106/239 (44%), Gaps = 8/239 (3%)
Query: 460 PKIVENLLAEMQDIGLKPTANS--YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHS 517
P ++ NLL M KP+ Y + + + K + + + F +M + GIKP + +
Sbjct: 159 PLVLNNLLETM-----KPSREVILYNVTMKVFRKSKDL-EKSEKLFDEMLERGIKPDNAT 212
Query: 518 YTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMM 577
+T +I +G ++A FE M G +P T ++D + RAG+ + ++
Sbjct: 213 FTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRAR 272
Query: 578 SEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHS 637
+EK VTF+ L+ + G Y ++ E +G+ P ++ YN L+++ R +
Sbjct: 273 TEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPW 332
Query: 638 KLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+ + K++ P+ TY+ ++ +++M + G + V Y L
Sbjct: 333 QAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTL 391
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 120/252 (47%), Gaps = 1/252 (0%)
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM 470
Y T++ ++ L EM +P T+N L+H+Y R N+ +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 471 QDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW 530
Q+ G KP +Y LI + + + D+A D + +M+ G+ P + +Y+ +I+ +G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFL-DIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 531 HEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI 590
A+ F M +G P++ TY ++D +A + Q +K+++ M + E KVT++I
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 591 LVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN 650
+++ G EA V +E + P Y +L++ + + G K Q + M
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 651 LKPDSVTYSTMI 662
L+P+ T ++++
Sbjct: 605 LRPNVPTCNSLL 616
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 121/275 (44%), Gaps = 2/275 (0%)
Query: 423 NHVEEAEGLFVEMKAK-NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
N A G F +K + K T+ ++ R Q + LL EM G +P +
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT 401
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LI +YGR +++ A + F +M++ G KP +Y LI ++ +G+ + A ++ M
Sbjct: 402 YNRLIHSYGRANYLNE-AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM 460
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
Q G+ P TY+ +++ +AG K++ M+ + VT+NI++D AK Y
Sbjct: 461 QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNY 520
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
A + + G P +TY+++M G + + EM N PD Y +
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 662 IYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+ +++ M+ +G +V + L
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSL 615
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 135/291 (46%), Gaps = 3/291 (1%)
Query: 345 VTVMRKLGRSAKDAWY--FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEK 402
T++ LGR+ + ++M R G + + ++ S+ ++ A+ + ++M++
Sbjct: 368 TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 403 KGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKI 462
G + + Y TL+D K+ ++ A ++ M+A + P T++++++ +
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 463 VENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALI 522
L EM D G P +Y ++ + + + + A + M+ G +P +Y+ ++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN-ALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 523 HAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVE 582
G+ E+A F MQ++ P Y L+D + +AG+ + + ++ M+ +
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 583 GTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARG 633
T N L+ F + + EA +++ +GL P++ TY +L++ G
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 143/356 (40%), Gaps = 5/356 (1%)
Query: 202 VVGEIVQLARNLPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQ 261
+V + + R EEAL G R+ + ++ +VL + L FF W++ Q
Sbjct: 301 IVENVSSVLRRFRWGPAAEEALQNLGLRI---DAYQANQVLKQMNDYGNALGFFYWLKRQ 357
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
T + LGRA + L + + YN I +
Sbjct: 358 PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIV 381
A V+ M++ +PD VT ++ + K G A +++M G+ I+
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG-FLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 382 KSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK 441
G + A + EM +G N + YN +MD K+ + + A L+ +M+ +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
P T++I+M + E + EMQ P Y L+ +G+ + + A
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV-EKAWQ 595
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
+ M G++P + +L+ + +AY +NM G++PS++TYT LL
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 2/229 (0%)
Query: 271 CTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESME 330
CT L + +AG D M +++ + + D Y+ I+ L G A K++ M
Sbjct: 438 CT-LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 331 KDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLV 390
P+ VT +IM+ + K R+ ++A + M G + + +++ G +
Sbjct: 497 DQGCTPNLVTYNIMMDLHAK-ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 391 SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
A + +EM++K + VY L+D + K+ +VE+A + M ++P T N L
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSL 615
Query: 451 MHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
+ + R + LL M +GL+P+ +YT L+S + DM
Sbjct: 616 LSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMG 664
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 120/252 (47%), Gaps = 1/252 (0%)
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM 470
Y T++ ++ L EM +P T+N L+H+Y R N+ +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 471 QDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW 530
Q+ G KP +Y LI + + + D+A D + +M+ G+ P + +Y+ +I+ +G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFL-DIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 531 HEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI 590
A+ F M +G P++ TY ++D +A + Q +K+++ M + E KVT++I
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 591 LVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN 650
+++ G EA V +E + P Y +L++ + + G K Q + M
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 651 LKPDSVTYSTMI 662
L+P+ T ++++
Sbjct: 605 LRPNVPTCNSLL 616
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 2/264 (0%)
Query: 423 NHVEEAEGLFVEMKAK-NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
N A G F +K + K T+ ++ R Q + LL EM G +P +
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT 401
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LI +YGR +++ A + F +M++ G KP +Y LI ++ +G+ + A ++ M
Sbjct: 402 YNRLIHSYGRANYLNE-AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM 460
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
Q G+ P TY+ +++ +AG K++ M+ + VT+NI++D AK Y
Sbjct: 461 QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNY 520
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
A + + G P +TY+++M G + + EM N PD Y +
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 662 IYXXXXXXXXXXXXXYHKQMIKSG 685
+ +++ M+ +G
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAG 604
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 135/291 (46%), Gaps = 3/291 (1%)
Query: 345 VTVMRKLGRSAKDAWY--FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEK 402
T++ LGR+ + ++M R G + + ++ S+ ++ A+ + ++M++
Sbjct: 368 TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 403 KGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKI 462
G + + Y TL+D K+ ++ A ++ M+A + P T++++++ +
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 463 VENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALI 522
L EM D G P +Y ++ + + + + A + M+ G +P +Y+ ++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN-ALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 523 HAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVE 582
G+ E+A F MQ++ P Y L+D + +AG+ + + ++ M+ +
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 583 GTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARG 633
T N L+ F + + EA +++ +GL P++ TY +L++ G
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 143/356 (40%), Gaps = 5/356 (1%)
Query: 202 VVGEIVQLARNLPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQ 261
+V + + R EEAL G R+ + ++ +VL + L FF W++ Q
Sbjct: 301 IVENVSSVLRRFRWGPAAEEALQNLGLRI---DAYQANQVLKQMNDYGNALGFFYWLKRQ 357
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
T + LGRA + L + + YN I +
Sbjct: 358 PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIV 381
A V+ M++ +PD VT ++ + K G A +++M G+ I+
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG-FLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 382 KSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK 441
G + A + EM +G N + YN +MD K+ + + A L+ +M+ +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
P T++I+M + E + EMQ P Y L+ +G+ + + A
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV-EKAWQ 595
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
+ M G++P + +L+ + +AY +NM G++PS++TYT LL
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 2/229 (0%)
Query: 271 CTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESME 330
CT L + +AG D M +++ + + D Y+ I+ L G A K++ M
Sbjct: 438 CT-LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 331 KDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLV 390
P+ VT +IM+ + K R+ ++A + M G + + +++ G +
Sbjct: 497 DQGCTPNLVTYNIMMDLHAK-ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 391 SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
A + +EM++K + VY L+D + K+ +VE+A + M ++P T N L
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSL 615
Query: 451 MHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
+ + R + LL M +GL+P+ +YT L+S + DM
Sbjct: 616 LSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMG 664
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 120/252 (47%), Gaps = 1/252 (0%)
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM 470
Y T++ ++ L EM +P T+N L+H+Y R N+ +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 471 QDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW 530
Q+ G KP +Y LI + + + D+A D + +M+ G+ P + +Y+ +I+ +G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFL-DIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 531 HEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI 590
A+ F M +G P++ TY ++D +A + Q +K+++ M + E KVT++I
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 591 LVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN 650
+++ G EA V +E + P Y +L++ + + G K Q + M
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 651 LKPDSVTYSTMI 662
L+P+ T ++++
Sbjct: 605 LRPNVPTCNSLL 616
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 2/264 (0%)
Query: 423 NHVEEAEGLFVEMKAK-NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
N A G F +K + K T+ ++ R Q + LL EM G +P +
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT 401
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LI +YGR +++ A + F +M++ G KP +Y LI ++ +G+ + A ++ M
Sbjct: 402 YNRLIHSYGRANYLNE-AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM 460
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
Q G+ P TY+ +++ +AG K++ M+ + VT+NI++D AK Y
Sbjct: 461 QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNY 520
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
A + + G P +TY+++M G + + EM N PD Y +
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 662 IYXXXXXXXXXXXXXYHKQMIKSG 685
+ +++ M+ +G
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAG 604
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 135/291 (46%), Gaps = 3/291 (1%)
Query: 345 VTVMRKLGRSAKDAWY--FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEK 402
T++ LGR+ + ++M R G + + ++ S+ ++ A+ + ++M++
Sbjct: 368 TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 403 KGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKI 462
G + + Y TL+D K+ ++ A ++ M+A + P T++++++ +
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 463 VENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALI 522
L EM D G P +Y ++ + + + + A + M+ G +P +Y+ ++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN-ALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 523 HAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVE 582
G+ E+A F MQ++ P Y L+D + +AG+ + + ++ M+ +
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 583 GTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARG 633
T N L+ F + + EA +++ +GL P++ TY +L++ G
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 143/356 (40%), Gaps = 5/356 (1%)
Query: 202 VVGEIVQLARNLPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQ 261
+V + + R EEAL G R+ + ++ +VL + L FF W++ Q
Sbjct: 301 IVENVSSVLRRFRWGPAAEEALQNLGLRI---DAYQANQVLKQMNDYGNALGFFYWLKRQ 357
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
T + LGRA + L + + YN I +
Sbjct: 358 PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIV 381
A V+ M++ +PD VT ++ + K G A +++M G+ I+
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG-FLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 382 KSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK 441
G + A + EM +G N + YN +MD K+ + + A L+ +M+ +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
P T++I+M + E + EMQ P Y L+ +G+ + + A
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV-EKAWQ 595
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
+ M G++P + +L+ + +AY +NM G++PS++TYT LL
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 2/229 (0%)
Query: 271 CTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESME 330
CT L + +AG D M +++ + + D Y+ I+ L G A K++ M
Sbjct: 438 CT-LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 331 KDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLV 390
P+ VT +IM+ + K R+ ++A + M G + + +++ G +
Sbjct: 497 DQGCTPNLVTYNIMMDLHAK-ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 391 SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
A + +EM++K + VY L+D + K+ +VE+A + M ++P T N L
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSL 615
Query: 451 MHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
+ + R + LL M +GL+P+ +YT L+S + DM
Sbjct: 616 LSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMG 664
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 145/305 (47%), Gaps = 3/305 (0%)
Query: 325 VYESMEKDNIRPDHVTCSIMVTVMRKLGRSAK--DAWYFFEKMNRKGVKWSEEVLGAIVK 382
++E M +D+ ++ + V++ L ++ K A+ F+K G K + ++
Sbjct: 227 LFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMM 286
Query: 383 SFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKP 442
F +GL +A I MEK + Y ++ + KS ++ A LF +MK + ++P
Sbjct: 287 LFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRP 346
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADA 502
+ + F+ L+ + + + + EMQ G +P+A + LI +Y + K+ D A
Sbjct: 347 SFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKL-DTALRL 405
Query: 503 FLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR 562
+ +MKK G +P YT +I +++ SG E A F++M++ G P+ TY+ LL+
Sbjct: 406 WDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAG 465
Query: 563 AGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMT 622
+G + MKI+ M + + ++ L+ A + A ++ E +G V
Sbjct: 466 SGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCA 525
Query: 623 YNMLM 627
++LM
Sbjct: 526 SDVLM 530
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 156/351 (44%), Gaps = 11/351 (3%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D YN + L G A+++YESMEK + D T +++ + K GR A+
Sbjct: 277 DTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGR-LDAAFKL 335
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F++M + ++ S V ++V S G + ++ + EM+ G +A ++ +L+D++ K
Sbjct: 336 FQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAK 395
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ ++ A L+ EMK +P + +++ ++++ + ++ + +M+ G PT ++
Sbjct: 396 AGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPST 455
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y+CL+ + ++ D A + M G++P SY +L+ + + A M
Sbjct: 456 YSCLLEMHAGSGQV-DSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
+ G + L+ + A +K + M S ++ L + K G Y
Sbjct: 515 KAMGYSVDVCASDVLMIYIKDA-SVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLY 573
Query: 602 MEARDVISEF----GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA 648
AR ++ GK+ L + Y ++ R K QL+ ++A
Sbjct: 574 DSARPLLETLVHSAGKVDL----VLYTSILAHLVRCQDEDKERQLMSILSA 620
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 1/251 (0%)
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
YN ++ K+ +E A F + + K T+N LM + + P + M+
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
++Y +I + + ++ D A F +MK+ ++P+ +++L+ + +G
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRL-DAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
+ + + MQ G +PS + +L+D + +AG T +++W M + ++
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
++ AK G+ A V + K G PT TY+ L+ +A GQ ++ M L
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 652 KPDSVTYSTMI 662
+P +Y +++
Sbjct: 485 RPGLSSYISLL 495
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 103/247 (41%), Gaps = 37/247 (14%)
Query: 264 SLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAW 323
SL+ ++ P L ++G D LF+ + K ++++ + + GR + +
Sbjct: 309 SLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSM 368
Query: 324 KVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKS 383
KVY M+ RP S + +++ S
Sbjct: 369 KVYMEMQGFGHRP------------------------------------SATMFVSLIDS 392
Query: 384 FCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPT 443
+ G + AL + EM+K G N +Y ++++ KS +E A +F +M+ PT
Sbjct: 393 YAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPT 452
Query: 444 AATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAF 503
+T++ L+ ++ Q + M + GL+P +SY L++ K++ D+A
Sbjct: 453 PSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLA-NKRLVDVAGKIL 511
Query: 504 LKMKKVG 510
L+MK +G
Sbjct: 512 LEMKAMG 518
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 147/340 (43%), Gaps = 20/340 (5%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D YN I G G ++DA K+++ M K ++P VT ++ + K R +
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
+ + GV+ + + +++K+ C G +S A ++ E + + +A +Y+TL+ + K
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ E + EM K KP T+N+L++ + + +L EM + GLKP S
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS 330
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y ++ + R KK + A F M + G P + SY + E+A V + M
Sbjct: 331 YNMILGVFFRIKKWEE-ATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
+G KP + L +G + + K+ + + G +++++ K+
Sbjct: 390 LFKGYKPRRDRLEGFLQKLCESGKLEILSKVIS-SLHRGIAGDADVWSVMIPTMCKE--- 445
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQ 641
VIS+ + ++L+N G S +PQ
Sbjct: 446 ----PVISD-----------SIDLLLNTVKEDGPLSAMPQ 470
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%)
Query: 441 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA 500
KP A T+NIL+H S+ L EM +KPT ++ LI + ++ +
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 501 DAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
+K G++PT H Y +LI A G A+ + IK Y+TL+
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTV 620
+AG + + I + M + + VT+N+L++GF + A V+ E + GL P V
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 621 MTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
++YNM++ + R + + L ++M PD+++Y
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSY 366
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 120/250 (48%), Gaps = 8/250 (3%)
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
+A YN L+ +S ++A LF EM K VKPT TF L+H + + K +
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 468 AEMQDI-GLKPTANSYTCLISAYGRQKKMS---DMAADAFLKMKKVGIKPTSHSYTALIH 523
+M + G++PT + Y LI A + ++S + +A+ + IK + Y+ LI
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAY----EGKIKVDAAIYSTLIS 266
Query: 524 AYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEG 583
+ +G + + E M +G KP TY L++GF D+++ ++ M+ + ++
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKP 326
Query: 584 TKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLL 643
+++N+++ F + ++ EA + + + G P ++Y ++ + G Q + +L
Sbjct: 327 DVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVIL 386
Query: 644 KEMAALNLKP 653
EM KP
Sbjct: 387 DEMLFKGYKP 396
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 116/259 (44%), Gaps = 3/259 (1%)
Query: 405 VFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
+ I++ +++ F + A +F EM + T + N L+ A + + + ++
Sbjct: 79 IVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMK 138
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
L+ + + G KP A +Y LI Q D A F +M K +KPT ++ LIH
Sbjct: 139 ERLSSIDEFG-KPDACTYNILIHGCS-QSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHG 196
Query: 525 YSVSGWHEKAYVAFENMQR-EGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEG 583
++A +M + G++P++ Y +L+ + G+ K+ K++
Sbjct: 197 LCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKV 256
Query: 584 TKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLL 643
++ L+ K G+ E ++ E + G P +TYN+L+N + ++L
Sbjct: 257 DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 644 KEMAALNLKPDSVTYSTMI 662
EM LKPD ++Y+ ++
Sbjct: 317 DEMVEKGLKPDVISYNMIL 335
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 129/287 (44%), Gaps = 1/287 (0%)
Query: 376 VLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM 435
V +V + G + +AL M K+ + +N L++ +C+S+ + A LF EM
Sbjct: 195 VYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREM 254
Query: 436 KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
K K +P +FN L+ + + + + EM ++G + + + L+ R+ ++
Sbjct: 255 KEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRV 314
Query: 496 SDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTT 555
D A L + + P+ Y +L+ +A E + ++G P TT
Sbjct: 315 DD-ACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTT 373
Query: 556 LLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIG 615
L++G R++G T+ + MM+ + VTFN+L+ +A + G
Sbjct: 374 LVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG 433
Query: 616 LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
P TY++L++ + + G+ + L+ EM ++ PD TY+ ++
Sbjct: 434 YEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 140/337 (41%), Gaps = 37/337 (10%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
+V +YN ++G + G + A + Y+ M K+ +PD T +I+
Sbjct: 192 NVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNIL----------------- 234
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
+ +C AL + EM++KG N + +NTL+ F
Sbjct: 235 -------------------INGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLS 275
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
S +EE + EM + + AT IL+ R + L+ ++ + + P+
Sbjct: 276 SGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFD 335
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y L+ + K + A + ++ K G P + T L+ SG EKA E M
Sbjct: 336 YGSLVEKLCGENK-AVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKM 394
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
GI P T+ LL + + ++ L S+ E + T+++LV GF K+G+
Sbjct: 395 MNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRR 454
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSK 638
E +++E + P + TYN LM+ + G+ S+
Sbjct: 455 KEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 5/263 (1%)
Query: 404 GVFSNA---IVYNTLMDAFCKSNHVEEAEGLFVEMKAK-NVKPTAATFNILMHAYSRRMQ 459
G+FS ++ + +DA+C++ ++ A F MK + KP +N +++ Y +
Sbjct: 149 GIFSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGD 208
Query: 460 PKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYT 519
M KP ++ LI+ Y R K D+A D F +MK+ G +P S+
Sbjct: 209 MDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKF-DLALDLFREMKEKGCEPNVVSFN 267
Query: 520 ALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE 579
LI + SG E+ M G + S T L+DG R G + ++++
Sbjct: 268 TLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK 327
Query: 580 KVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKL 639
+V ++ + LV+ + + + A +++ E K G P + L+ + G+ K
Sbjct: 328 RVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
Query: 640 PQLLKEMAALNLKPDSVTYSTMI 662
+++M + PDSVT++ ++
Sbjct: 388 SGFMEKMMNAGILPDSVTFNLLL 410
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 100/224 (44%), Gaps = 1/224 (0%)
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHE 532
I KP Y +++ Y + M D A + +M K KP ++ LI+ Y S +
Sbjct: 187 IDGKPNVGVYNTVVNGYVKSGDM-DKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFD 245
Query: 533 KAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILV 592
A F M+ +G +P++ ++ TL+ GF +G + +K+ M+ ++ T ILV
Sbjct: 246 LALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILV 305
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLK 652
DG ++G+ +A ++ + + P+ Y L+ + + ++++E+
Sbjct: 306 DGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQT 365
Query: 653 PDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
P + +T++ + ++M+ +G + D ++ L
Sbjct: 366 PCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLL 409
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 1/186 (0%)
Query: 270 ACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESM 329
C +L L R G D L +L + + Y + + L + A ++ E +
Sbjct: 300 TCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEEL 359
Query: 330 EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGL 389
K P + C+ +V +RK GR+ K A F EKM G+ +++ C+
Sbjct: 360 WKKGQTPCFIACTTLVEGLRKSGRTEK-ASGFMEKMMNAGILPDSVTFNLLLRDLCSSDH 418
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
+ A ++ KG + Y+ L+ F K +E E L EM K++ P T+N
Sbjct: 419 STDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNR 478
Query: 450 LMHAYS 455
LM S
Sbjct: 479 LMDGLS 484
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 145/333 (43%), Gaps = 6/333 (1%)
Query: 371 KWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEG 430
W V +VK + GLV + E+ G + + N L++ K + +E+
Sbjct: 163 NWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQ 222
Query: 431 LFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYG 490
++ M + P TFNIL + + + V++ L +M++ G +P +Y L+S+Y
Sbjct: 223 VYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYC 282
Query: 491 RQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSI 550
R+ ++ + A + M + + P +YT+LI G +A+ F M GIKP
Sbjct: 283 RRGRLKE-AFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE 610
+Y TL+ + + G Q K+ M+ V + T ++V+GF ++G+ + A + + E
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVE 401
Query: 611 FGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK---EMAALNLKPDSVTYSTMIYXXXX 667
++ + + L+ + + G+ LL E KP+ TY+ +I
Sbjct: 402 LRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLIESLSR 459
Query: 668 XXXXXXXXXYHKQMIKSGQVMDVDSYQKLRAIL 700
++ QV+D +Y+ L L
Sbjct: 460 CDAIEEALVLKGKLKNQNQVLDAKTYRALIGCL 492
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 151/350 (43%), Gaps = 15/350 (4%)
Query: 320 EDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGA 379
ED W+VY M + I P+ T +I+ V + ++ F EKM +G +
Sbjct: 218 EDCWQVYSVMCRVGIHPNTYTFNILTNVFCN-DSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
+V S+C G + A + M ++ V + + Y +L+ CK V EA F M +
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC--LISAYGRQKKMSD 497
+KP ++N L++AY + + + LL EM +G + +TC ++ + R+ ++
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLHEM--LGNSVVPDRFTCKVIVEGFVREGRLLS 394
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQR----EGIKPSIETY 553
A + ++++++ + LI + G K + A + R EG + ETY
Sbjct: 395 -AVNFVVELRRLKVDIPFEVCDFLIVSLCQEG---KPFAAKHLLDRIIEEEGHEAKPETY 450
Query: 554 TTLLDGFRRAGDTQTMMKI-WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFG 612
L++ R + + + KL +V K T+ L+ + G+ EA +++E
Sbjct: 451 NNLIESLSRCDAIEEALVLKGKLKNQNQVLDAK-TYRALIGCLCRIGRNREAESLMAEMF 509
Query: 613 KIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ P L+ Y + K +LL A D +Y++++
Sbjct: 510 DSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLV 559
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 171/446 (38%), Gaps = 55/446 (12%)
Query: 254 FFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGL 313
FF+W++ F L R +G+ ++L L SSKKF + + L
Sbjct: 99 FFKWVK---------------FDLGKRPNVGNYCLLL-HILVSSKKFPLAMQFLCELIEL 142
Query: 314 LCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWS 373
D ++V S D D V ++V KLG ++ + F ++ G S
Sbjct: 143 TSKKEEVDVFRVLVSA-TDECNWDPVVFDMLVKGYLKLGL-VEEGFRVFREVLDSGFSVS 200
Query: 374 EEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFV 433
++ L+ + S M + G+ N +N L + FC ++ E +
Sbjct: 201 VVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLE 260
Query: 434 EMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQK 493
+M+ + +P T+N L+ +Y RR + K L M + P +YT LI +
Sbjct: 261 KMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDG 320
Query: 494 KMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETY 553
++ + A F +M GIKP SY LI+AY G +++ M + P T
Sbjct: 321 RVRE-AHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTC 379
Query: 554 TTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR-------- 605
+++GF R G + + + KV+ + L+ ++G+ A+
Sbjct: 380 KVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIE 439
Query: 606 ---------------------DVISEF----GKIGLHPTVM---TYNMLMNAYARGGQHS 637
D I E GK+ V+ TY L+ R G++
Sbjct: 440 EEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNR 499
Query: 638 KLPQLLKEMAALNLKPDSVTYSTMIY 663
+ L+ EM +KPDS ++Y
Sbjct: 500 EAESLMAEMFDSEVKPDSFICGALVY 525
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 111/255 (43%)
Query: 431 LFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYG 490
+F +MK + P+ + ++ Q + M++IGL PT S LI A
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALC 167
Query: 491 RQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSI 550
R D FL+M K G P S++Y LI G ++A F M + P++
Sbjct: 168 RNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV 227
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE 610
TYT+L++G + + M+ + M S+ +E T++ L+DG K G+ ++A ++
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287
Query: 611 FGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXX 670
G P ++TY L+ + + + +LL M LKPD+ Y +I
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK 347
Query: 671 XXXXXXYHKQMIKSG 685
+ +MI G
Sbjct: 348 FREAANFLDEMILGG 362
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 140/293 (47%), Gaps = 12/293 (4%)
Query: 373 SEEVLGAIVKSFCAEGLVSR---ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAE 429
SE++L +I + + G V R +L + +M+ + Y T++ + N + A
Sbjct: 85 SEDILLSICRGY---GRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAF 141
Query: 430 GLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE---NLLAEMQDIGLKPTANSYTCLI 486
+ M+ + PT A+ N+L+ A R V+ + EM G P + +Y LI
Sbjct: 142 KFYKNMREIGLPPTVASLNVLIKALCR--NDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 487 SAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGI 546
S R ++ D A F +M + PT +YT+LI+ S ++A E M+ +GI
Sbjct: 200 SGLCRFGRI-DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGI 258
Query: 547 KPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARD 606
+P++ TY++L+DG + G + M+++++MM+ VT+ L+ G K+ + EA +
Sbjct: 259 EPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVE 318
Query: 607 VISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
++ GL P Y +++ + + + L EM + P+ +T++
Sbjct: 319 LLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWN 371
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 135/299 (45%), Gaps = 10/299 (3%)
Query: 371 KWSEEVL-GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNT-----LMDAFCKSNH 424
KWS+ + ++K AE V +++ + + ++N V++ ++ +N
Sbjct: 9 KWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAE--YANGYVHDQSSFGYMVLRLVSANK 66
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
+ AE L V MK +N + + Y R +P + +M+D P+ +Y
Sbjct: 67 FKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVT 126
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVS-GWHEKAYVAFENMQR 543
+++ + ++ ++A + M+++G+ PT S LI A + G + F M +
Sbjct: 127 VLAILVEENQL-NLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPK 185
Query: 544 EGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYME 603
G P TY TL+ G R G K++ M+ + T VT+ L++G E
Sbjct: 186 RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDE 245
Query: 604 ARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
A + E G+ P V TY+ LM+ + G+ + +L + M A +P+ VTY+T+I
Sbjct: 246 AMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 137/312 (43%), Gaps = 7/312 (2%)
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIV 381
A+K Y++M + + P + ++++ + + + F +M ++G G ++
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 382 KSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK 441
C G + A + +EM +K + Y +L++ C S +V+EA EMK+K ++
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE 259
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
P T++ LM + + L M G +P +YT LI+ +++K+ + A +
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQE-AVE 318
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL---D 558
+M G+KP + Y +I + +A + M GI P+ T+ + +
Sbjct: 319 LLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSN 378
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTKV---TFNILVDGFAKQGQYMEARDVISEFGKIG 615
R + + L +S + G V T LV K+G++ +A ++ E G
Sbjct: 379 EVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDG 438
Query: 616 LHPTVMTYNMLM 627
P+ T+ +L+
Sbjct: 439 CIPSKGTWKLLI 450
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 130/300 (43%), Gaps = 12/300 (4%)
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEV 376
G + K++ M K PD T +++ + + GR +A F +M K +
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGR-IDEAKKLFTEMVEKDCAPTVVT 229
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
+++ C V A+ EM+ KG+ N Y++LMD CK +A LF M
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMS 496
A+ +P T+ L+ + + + LL M GLKP A Y +IS + K
Sbjct: 290 ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFR 349
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYS--------VSGWHEKAYVAFENMQREGIKP 548
+ AA+ +M GI P ++ IH + + + +A+ + +M+ GI
Sbjct: 350 E-AANFLDEMILGGITPNRLTWN--IHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISV 406
Query: 549 SIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVI 608
+ET +L+ + G+ Q +++ ++++ +K T+ +L+ + EA D +
Sbjct: 407 EVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTL 466
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 109/284 (38%), Gaps = 31/284 (10%)
Query: 274 LFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDN 333
L L R G D+ LF + V Y + I+GL ++A + E M+
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKG 257
Query: 334 IRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRA 393
I P+ T S ++ + K GRS + A FE M +G + + ++ C E + A
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQ-AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA 453
+ + M +G+ +A +Y ++ FC + EA EM + P T+NI H
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNI--HV 374
Query: 454 YSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKP 513
+ ++V L A P+ A +L M+ GI
Sbjct: 375 ---KTSNEVVRGLCANY------PSR-------------------AFTLYLSMRSRGISV 406
Query: 514 TSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
+ +L+ G +KA + + +G PS T+ L+
Sbjct: 407 EVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 167/363 (46%), Gaps = 5/363 (1%)
Query: 303 VHIYNAAISGLLCCGRYEDAWKVYESM-EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
V+ +S L+ ++ A +V++ + E+ +P T ++ ++ K G+ + A
Sbjct: 88 VNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNR-AQKL 146
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEK-KGVFSNAIVYNTLMDAFC 420
F++M +G++ + E+ A++ ++ L+ A I +M+ + Y+TL+ A
Sbjct: 147 FDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACV 206
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM-QDIGLKPTA 479
++ + + L+ EM + + P T NI++ Y R + +E +L++M KP
Sbjct: 207 DASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDV 266
Query: 480 NSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
+ ++S +G K+ DM + K + GI+P + ++ LI +Y ++K E
Sbjct: 267 WTMNIILSVFGNMGKI-DMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVME 325
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
M++ + TY +++ F GD + M + M SE ++ TF L++G+A G
Sbjct: 326 YMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAG 385
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
+ + + K + YN +++A A+ ++ ++ M DS T+
Sbjct: 386 LFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFE 445
Query: 660 TMI 662
M+
Sbjct: 446 IMV 448
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/390 (18%), Positives = 158/390 (40%), Gaps = 83/390 (21%)
Query: 256 QWMRA-------QEPSLVTPRACTV--LFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIY 306
QW++A +E + P+ T L LLG++G ++ LF + V +Y
Sbjct: 103 QWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELY 162
Query: 307 NAAISGLLCCGRYEDAWKVYESMEK-DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
A ++ +DA+ + + M+ +PD T S ++ ++ DA F
Sbjct: 163 TALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLL-------KACVDASQF---- 211
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
+++ ++ K EM+++ + N + N ++ + +
Sbjct: 212 ---------DLVDSLYK----------------EMDERLITPNTVTQNIVLSGYGRVGRF 246
Query: 426 EEAEGLFVEMKAKNV-KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
++ E + +M KP T NI++ + + ++E+ + ++ G++P ++
Sbjct: 247 DQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNI 306
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE 544
LI +YG+ K+M D + M+K+ T+ +Y +I A++ G + + F+ M+ E
Sbjct: 307 LIGSYGK-KRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSE 365
Query: 545 GIKPSIETYTTLLDGFRRAG-----------------------------------DTQTM 569
G+K +T+ L++G+ AG D M
Sbjct: 366 GMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEM 425
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
+++ M + TF I+V+ + K+G
Sbjct: 426 ERVYIRMKERQCVCDSRTFEIMVEAYEKEG 455
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 307 NAAISGLLCCGRYEDAWKVYESM-EKDNIRPDHVTCSIMVTVMRKLGR-SAKDAWYFFEK 364
N +SG GR++ KV M +PD T +I+++V +G+ ++WY EK
Sbjct: 234 NIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWY--EK 291
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
G++ ++ S+ + + + + M K YN +++AF
Sbjct: 292 FRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGD 351
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ---DIGLKPTANS 481
+ E F +M+++ +K TF L++ Y+ + +++ +Q +
Sbjct: 352 AKNMELTFDQMRSEGMKADTKTFCCLINGYA---NAGLFHKVISSVQLAAKFEIPENTAF 408
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y +ISA + + +M +++MK+ S ++ ++ AY G ++K Y +
Sbjct: 409 YNAVISACAKADDLIEMER-VYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQER 467
Query: 542 QR 543
Q+
Sbjct: 468 QK 469
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 180/420 (42%), Gaps = 30/420 (7%)
Query: 252 LYFFQW-MRAQEPSLVTPR---ACTVLFPLLGRAGMGDKLMVLFRNLPS--SKKFRDVHI 305
L F+ W +R+ + R +C ++ L+G D L ++ NL S +K +H+
Sbjct: 75 LEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIM-ANLMSVEGEKLSPLHV 133
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
+ I CG D V++S+ + C+ A+ A+ E+
Sbjct: 134 LSGLIRSYQACGSSPD---VFDSLVR--------ACT--------QNGDAQGAYEVIEQT 174
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
+G S L + + R + EM+ G N +N ++ +FCK + +
Sbjct: 175 RAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKL 234
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIG---LKPTANSY 482
EA +F M V P +FN+++ + + LL +M + + P A +Y
Sbjct: 235 FEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTY 294
Query: 483 TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ 542
+I+ + + ++ D+A M K G+ +Y AL+ AY +G ++A + M
Sbjct: 295 NSVINGFCKAGRL-DLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMT 353
Query: 543 REGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYM 602
+G+ + Y +++ GD + M + + M S+ ++ + T I+V G + G
Sbjct: 354 SKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVK 413
Query: 603 EARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
EA + + + L ++ +N LM+ + R + + Q+L M L D++++ T+I
Sbjct: 414 EAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLI 473
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 165/365 (45%), Gaps = 20/365 (5%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
YN+ I+G GR + A ++ M K + + T +V + G S+ +A ++M
Sbjct: 294 YNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAG-SSDEALRLCDEM 352
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGV----FSNAIVYNTLMDAFCK 421
KG+ + + +IV EG + A+ + +M K + F+ AIV L C+
Sbjct: 353 TSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGL----CR 408
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ +V+EA ++ K + N LMH + R + + +L M GL A S
Sbjct: 409 NGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAIS 468
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
+ LI Y ++ K+ + A + + M K+ Y ++++ S G A M
Sbjct: 469 FGTLIDGYLKEGKL-ERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAM 527
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK----VTFNILVDGFAK 597
+ IK I TY TLL+ + G+ + I M +K +G K VTFNI+++ K
Sbjct: 528 E---IK-DIVTYNTLLNESLKTGNVEEADDILSKM--QKQDGEKSVSLVTFNIMINHLCK 581
Query: 598 QGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
G Y +A++V+ + G+ P +TY L+ ++++ K+ +L + + P
Sbjct: 582 FGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHI 641
Query: 658 YSTMI 662
Y +++
Sbjct: 642 YLSIV 646
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 133/302 (44%), Gaps = 16/302 (5%)
Query: 267 TPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVY 326
R L GRAG D+ + L + S + IYN+ + L G E A V
Sbjct: 325 NERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL 384
Query: 327 ESMEKDNIRPDHVTCSIMVTVMRKLGRSA--KDAWYFFEKMNRKGVKWSEEVL--GAIVK 382
M N++ D T +I V+R L R+ K+A F +++ K K E+++ ++
Sbjct: 385 RDMNSKNMQIDRFTQAI---VVRGLCRNGYVKEAVEFQRQISEK--KLVEDIVCHNTLMH 439
Query: 383 SFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKP 442
F + ++ A I M +G+ +AI + TL+D + K +E A ++ M N
Sbjct: 440 HFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTS 499
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADA 502
+N +++ S+R E ++ M+ +K +Y L++ + + + A D
Sbjct: 500 NLVIYNSIVNGLSKRGMAGAAEAVVNAME---IKDIV-TYNTLLNESLKTGNVEE-ADDI 554
Query: 503 FLKMKKV-GIKPTSH-SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
KM+K G K S ++ +I+ G +EKA + M G+ P TY TL+ F
Sbjct: 555 LSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSF 614
Query: 561 RR 562
+
Sbjct: 615 SK 616
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 142/316 (44%), Gaps = 1/316 (0%)
Query: 347 VMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVF 406
V++++ A +F+ + G K +V + + EM + G
Sbjct: 332 VLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCK 391
Query: 407 SNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENL 466
N + YN L+ ++ ++N+++EA +F +M+ +P T+ L+ +++ I ++
Sbjct: 392 PNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDM 451
Query: 467 LAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYS 526
MQ+ GL P +Y+ +I+ G+ + A F +M G P ++ +I ++
Sbjct: 452 YQRMQEAGLSPDTFTYSVIINCLGKAGHLP-AAHRLFCEMVGQGCTPNLVTFNIMIALHA 510
Query: 527 VSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKV 586
+ +E A + +MQ G +P TY+ +++ G + ++ M + +
Sbjct: 511 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEP 570
Query: 587 TFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
+ +LVD + K G +A + GL P V T N L++ + R + S+ LL+ M
Sbjct: 571 VYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Query: 647 AALNLKPDSVTYSTMI 662
AL L P TY+ ++
Sbjct: 631 LALGLHPSLQTYTLLL 646
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 165/432 (38%), Gaps = 79/432 (18%)
Query: 199 PEGVVGEIVQLARNLPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWM 258
P VV + + R EEAL +G R+ + ++ +VL + L FF W+
Sbjct: 293 PGYVVENVSSILRRFKWGHAAEEALHNFGFRM---DAYQANQVLKQMDNYANALGFFYWL 349
Query: 259 RAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR 318
+ Q P K D H Y + L +
Sbjct: 350 KRQ---------------------------------PGFK--HDGHTYTTMVGNLGRAKQ 374
Query: 319 YEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSA--KDAWYFFEKMNRKGVKWSEEV 376
+ + K+ + M +D +P+ VT + ++ GR+ K+A F +M G +
Sbjct: 375 FGEINKLLDEMVRDGCKPNTVTYNRLI---HSYGRANYLKEAMNVFNQMQEAGCEPDRVT 431
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
++ G + A+ + M++ G+ + Y+ +++ K+ H+ A LF EM
Sbjct: 432 YCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMV 491
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMS 496
+ P TFNI+ I L A +Y + Y
Sbjct: 492 GQGCTPNLVTFNIM----------------------IALHAKARNYETALKLY------- 522
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
M+ G +P +Y+ ++ G+ E+A F MQR+ P Y L
Sbjct: 523 -------RDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLL 575
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
+D + +AG+ + ++ M+ + T N L+ F + + EA +++ +GL
Sbjct: 576 VDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGL 635
Query: 617 HPTVMTYNMLMN 628
HP++ TY +L++
Sbjct: 636 HPSLQTYTLLLS 647
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 10/278 (3%)
Query: 416 MDAFCKSNHV-------EEAEGLFVEMKAK-NVKPTAATFNILMHAYSRRMQPKIVENLL 467
MDA+ ++N V A G F +K + K T+ ++ R Q + LL
Sbjct: 324 MDAY-QANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLL 382
Query: 468 AEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSV 527
EM G KP +Y LI +YGR + + A + F +M++ G +P +Y LI ++
Sbjct: 383 DEMVRDGCKPNTVTYNRLIHSYGRANYLKE-AMNVFNQMQEAGCEPDRVTYCTLIDIHAK 441
Query: 528 SGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVT 587
+G+ + A ++ MQ G+ P TY+ +++ +AG +++ M+ + VT
Sbjct: 442 AGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVT 501
Query: 588 FNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMA 647
FNI++ AK Y A + + G P +TY+++M G + + EM
Sbjct: 502 FNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQ 561
Query: 648 ALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSG 685
N PD Y ++ +++ M+++G
Sbjct: 562 RKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG 599
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 15/226 (6%)
Query: 451 MHAYSRRMQPKIVENLLAEMQDI--------------GLKPTANSYTCLISAYGRQKKMS 496
+H + RM +L +M + G K ++YT ++ GR K+
Sbjct: 317 LHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFG 376
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
++ +M + G KP + +Y LIH+Y + + ++A F MQ G +P TY TL
Sbjct: 377 EIN-KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTL 435
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
+D +AG M +++ M + T++++++ K G A + E G
Sbjct: 436 IDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGC 495
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
P ++T+N+++ +A+ + +L ++M +PD VTYS ++
Sbjct: 496 TPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVM 541
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 115/264 (43%), Gaps = 6/264 (2%)
Query: 238 VLEVLGKERLLVCCLYFFQWMRAQ--EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLP 295
++ G+ L + F M+ EP VT CT L + +AG D M +++ +
Sbjct: 400 LIHSYGRANYLKEAMNVFNQMQEAGCEPDRVT--YCT-LIDIHAKAGFLDIAMDMYQRMQ 456
Query: 296 SSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSA 355
+ D Y+ I+ L G A +++ M P+ VT +IM+ + K R+
Sbjct: 457 EAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK-ARNY 515
Query: 356 KDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
+ A + M G + + +++ G + A + +EM++K + VY L
Sbjct: 516 ETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLL 575
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGL 475
+D + K+ +V++A + M ++P T N L+ + R + NLL M +GL
Sbjct: 576 VDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGL 635
Query: 476 KPTANSYTCLISAYGRQKKMSDMA 499
P+ +YT L+S + DM
Sbjct: 636 HPSLQTYTLLLSCCTDARSNFDMG 659
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 146/318 (45%), Gaps = 5/318 (1%)
Query: 341 CSIMVTVMRKLGRSAK-DAWY-FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQS 398
C + T++ +S K DA + F +M+ GV+ + GA++ G V++A
Sbjct: 502 CKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYG 561
Query: 399 EMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN--VKPTAATFNILMHAYSR 456
+ K V + +V+N L+ A +S V+ A + EMKA+ + P + LM A
Sbjct: 562 ILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCN 621
Query: 457 RMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSH 516
Q + + + + G++ T YT +++ + D A + MK+ + P
Sbjct: 622 AGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDW-DFACSIYKDMKEKDVTPDEV 680
Query: 517 SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM 576
++ALI + ++A+ ++ + +GI+ +Y++L+ A D + +++++ +
Sbjct: 681 FFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKI 740
Query: 577 MSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQH 636
S K+ T T N L+ + Q +A + + E +GL P +TY+MLM A R
Sbjct: 741 KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDF 800
Query: 637 SKLPQLLKEMAALNLKPD 654
+LL + + P+
Sbjct: 801 EVSFKLLSQAKGDGVSPN 818
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 138/288 (47%), Gaps = 9/288 (3%)
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
++ S G V + +M GV +N + L+D ++ V +A G + +++KN
Sbjct: 508 LISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKN 567
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEM--QDIGLKPTANSYTCLISAYGRQKKMSD 497
VKP FN L+ A + ++LAEM + + P S L+ A ++ +
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQV-E 626
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
A + + + K GI+ T YT +++ S SG + A +++M+ + + P ++ L+
Sbjct: 627 RAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI 686
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTK---VTFNILVDGFAKQGQYMEARDVISEFGKI 614
D AG + + + + ++ K +G + ++++ L+ + +A ++ + I
Sbjct: 687 D---VAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSI 743
Query: 615 GLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
L PT+ T N L+ A G Q K + L E+ L LKP+++TYS ++
Sbjct: 744 KLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 145/326 (44%), Gaps = 15/326 (4%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T L ++G D + +F + +S ++H + A I G G+ A+ Y +
Sbjct: 506 TTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRS 565
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKG--VKWSEEVLGAIVKSFCAEGL 389
N++PD V + +++ + G + A+ +M + + +GA++K+ C G
Sbjct: 566 KNVKPDRVVFNALISACGQSG-AVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQ 624
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
V RA + + K G+ VY +++ KS + A ++ +MK K+V P F+
Sbjct: 625 VERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSA 684
Query: 450 LMHAYSRRMQPKIVENLLAEMQDI---GLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
L+ K+++ +QD G++ SY+ L+ A K A + + K+
Sbjct: 685 LIDVAG---HAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKK-ALELYEKI 740
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
K + ++PT + ALI A KA + ++ G+KP+ TY+ L+ R D
Sbjct: 741 KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDF 800
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILV 592
+ K+ + +G V+ N+++
Sbjct: 801 EVSFKLLS-----QAKGDGVSPNLIM 821
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 96/212 (45%), Gaps = 3/212 (1%)
Query: 453 AYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIK 512
AY+R ++ +++ ++ ++D+ + + +++ + K +AF + K+ +
Sbjct: 406 AYNRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAF-RFTKLILN 464
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI 572
PT ++ L+ + S E A +Q G+ + YTTL+ ++G M ++
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 573 WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
+ M + VE TF L+DG A+ GQ +A + P + +N L++A +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 633 GGQHSKLPQLLKEMAALN--LKPDSVTYSTMI 662
G + +L EM A + PD ++ ++
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALM 616
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/317 (18%), Positives = 129/317 (40%), Gaps = 18/317 (5%)
Query: 305 IYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEK 364
+Y A++ G ++ A +Y+ M++ ++ PD V S ++ V + +A+ +
Sbjct: 646 VYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGH-AKMLDEAFGILQD 704
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
+G++ +++ + C +AL + +++ + N L+ A C+ N
Sbjct: 705 AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
+ +A E+K +KP T+++LM A R+ ++ LL++ + G+ P C
Sbjct: 765 LPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRC 824
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE 544
+ S R+ + + + + K +P + W A + +
Sbjct: 825 ITSLCKRRFEKACAGGEPVVSFKSG--RPQIENK-----------WTSMALMVYRETISG 871
Query: 545 GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYM-E 603
G P+ E + +L + D ++ + + LVDGF G+Y
Sbjct: 872 GTVPTTEVVSQVLGCLQLPHDAALRDRLISTLGINISSQKQHNIFPLVDGF---GEYDPR 928
Query: 604 ARDVISEFGKIGLHPTV 620
A ++ E +G+ P+V
Sbjct: 929 AFSLLEEATSLGVLPSV 945
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 129/252 (51%), Gaps = 11/252 (4%)
Query: 302 DVHIYNAAISGLL-CCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY 360
D +N ++G G +A +V+ M ++ D V+ S M++ K G S
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSK-GGSLNKVLK 323
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEK-KGVFSNAIVYNTLMDAF 419
F++M ++ ++ +V A+V + VS A + ME+ KG+ N + YN+L+
Sbjct: 324 LFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPL 383
Query: 420 CKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR--RMQPKIVENLLAEMQDIGLKP 477
CK+ EEA+ +F EM K + PT T+ HA+ R R ++ E LLA+M+ +G +P
Sbjct: 384 CKARKTEEAKQVFDEMLEKGLFPTIRTY----HAFMRILRTGEEVFE-LLAKMRKMGCEP 438
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
T +Y LI R + ++ + +MK+ + P SY +IH ++G E+AY
Sbjct: 439 TVETYIMLIRKLCRWRDFDNVLL-LWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGY 497
Query: 538 FENMQREGIKPS 549
++ M+ +G++P+
Sbjct: 498 YKEMKDKGMRPN 509
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 165/345 (47%), Gaps = 9/345 (2%)
Query: 344 MVTVMRKLGRSAKDAWYFFEKMNRKGVKW-SEEVLGAIVKSFCAEGLVSRALIIQSEMEK 402
M++++ K+ R AW ++M + + + L +++ +CA V +A+ ++
Sbjct: 167 MISILGKM-RKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKR 225
Query: 403 KGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRM-QPK 461
+ + +L+ A C+ +V +A L K K A +FNI+++ + + P+
Sbjct: 226 FKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDK-YPFDAKSFNIVLNGWCNVIGSPR 284
Query: 462 IVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAL 521
E + EM ++G+K SY+ +IS Y + ++ + F +MKK I+P Y A+
Sbjct: 285 EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLK-LFDRMKKECIEPDRKVYNAV 343
Query: 522 IHAYSVSGWHEKAYVAFENMQRE-GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEK 580
+HA + + + +A + M+ E GI+P++ TY +L+ +A T+ +++ M+ +
Sbjct: 344 VHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKG 403
Query: 581 VEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLP 640
+ T T++ + + G+ E +++++ K+G PTV TY ML+ R +
Sbjct: 404 LFPTIRTYHAFMR-ILRTGE--EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVL 460
Query: 641 QLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSG 685
L EM + PD +Y MI+ Y+K+M G
Sbjct: 461 LLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKG 505
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 113/241 (46%), Gaps = 6/241 (2%)
Query: 399 EMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRM 458
EM GV + + Y++++ + K + + LF MK + ++P +N ++HA ++
Sbjct: 292 EMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKAS 351
Query: 459 QPKIVENLLAEMQD-IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHS 517
NL+ M++ G++P +Y LI + +K ++ A F +M + G+ PT +
Sbjct: 352 FVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARK-TEEAKQVFDEMLEKGLFPTIRT 410
Query: 518 YTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMM 577
Y A + E+ + M++ G +P++ETY L+ R D ++ +W M
Sbjct: 411 YHAFMRILRTG---EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMK 467
Query: 578 SEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHS 637
+ V ++ +++ G G+ EA E G+ P +M+ + ++ G Q++
Sbjct: 468 EKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFS-GKQYA 526
Query: 638 K 638
+
Sbjct: 527 E 527
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 474 GLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPT-SHSYTALIHAYSVSGWHE 532
G + Y +IS G+ +K D A +M+K P+ +S T LI H+
Sbjct: 156 GYVRSVREYHSMISILGKMRKF-DTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAVHD 212
Query: 533 --KAYVAFENMQREGIKPSIETYTTLLDG---FRRAGDTQTMMKIWKLMMSEKVEGTKVT 587
KA F +R ++ I+ + +LL ++ D ++ +K +
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI----FCNKDKYPFDAKS 268
Query: 588 FNILVDGFAKQ-GQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
FNI+++G+ G EA V E G +G+ V++Y+ +++ Y++GG +K+ +L M
Sbjct: 269 FNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRM 328
Query: 647 AALNLKPDSVTYSTMIY 663
++PD Y+ +++
Sbjct: 329 KKECIEPDRKVYNAVVH 345
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 181/428 (42%), Gaps = 52/428 (12%)
Query: 240 EVLGKERLLVCCLYFFQWMRAQEPSLVTPRACTVLFPLL--GRAGMGDKLMVLFRNLPSS 297
E+L + ++ L+FF+W+ + P + +LF L G+A K +
Sbjct: 85 ELLKSQNNVLFSLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPE 144
Query: 298 KKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTC-SIMVTVM--RKLGRS 354
+ ++ + GL+ E+A +VY ++ I VTC S+++ + RKL R
Sbjct: 145 PTLLEQYVKCLSEEGLV-----EEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDR- 198
Query: 355 AKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNT 414
W ++M ++ E + ++++ C G VS + + K+G+ VY
Sbjct: 199 ---FWELHKEMVES--EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAK 253
Query: 415 LMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIG 474
L+ FC+ + + M A N P+ M+ Y KI++ L
Sbjct: 254 LISGFCEIGNYACMSEVLHTMIAWNHFPS-------MYIYQ-----KIIKGL-------- 293
Query: 475 LKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKA 534
C+ +K++ A F +K G P YT +I + GW A
Sbjct: 294 ---------CM-----NKKQLE--AYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSA 337
Query: 535 YVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDG 594
+ M ++G++P+ Y ++ G + G+ + + M+ GT ++ N ++ G
Sbjct: 338 RKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKG 397
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
F G+ EA ++ + G+ P +TYN L+ + + + K +L KE+ AL LKP
Sbjct: 398 FCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPS 457
Query: 655 SVTYSTMI 662
+ Y+ ++
Sbjct: 458 GMAYAALV 465
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 1/193 (0%)
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
I+K C A I ++ KG + +VY T++ FC+ + A L+ EM K
Sbjct: 289 IIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKG 348
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
++P +N+++H + +R + +VE EM G T S +I + K SD A
Sbjct: 349 MRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGK-SDEA 407
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
+ F M + G+ P + +Y ALI + EK ++ ++ G+KPS Y L+
Sbjct: 408 FEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRN 467
Query: 560 FRRAGDTQTMMKI 572
+ + T + +
Sbjct: 468 LKMSDSVATSLNL 480
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 15/218 (6%)
Query: 288 MVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTV 347
M+ + + PS ++IY I GL + +A+ ++++++ PD V + M+
Sbjct: 274 MIAWNHFPS------MYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRG 327
Query: 348 MRKLG--RSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGV 405
+ G SA+ W+ +M +KG++ +E ++ G +S +EM + G
Sbjct: 328 FCEKGWLGSARKLWF---EMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGY 384
Query: 406 FSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVEN 465
+ NT++ FC +EA +F M V P A T+N L+ + + + +
Sbjct: 385 GGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLK 444
Query: 466 LLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAF 503
L E++ +GLKP+ +Y L+ R KMSD A +
Sbjct: 445 LYKELKALGLKPSGMAYAALV----RNLKMSDSVATSL 478
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 175/381 (45%), Gaps = 28/381 (7%)
Query: 289 VLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVM 348
VL +L +S R I ++ + CG+ DA KV++ M K +I C +M+
Sbjct: 37 VLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISG----CVVMI--- 89
Query: 349 RKLGRSAKDAWY-----FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRAL--IIQSEME 401
G A++ +Y FF +M + G+K ++ +++K+ + L+ R +I +
Sbjct: 90 ---GACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKA--SRNLLDREFGKMIHCLVL 144
Query: 402 KKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPK 461
K S+A + ++L+D + K V A +F ++ +++ FN ++ Y+ Q
Sbjct: 145 KFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDL----VVFNAMISGYANNSQAD 200
Query: 462 IVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAL 521
NL+ +M+ +G+KP ++ LIS + + + ++ M G KP S+T++
Sbjct: 201 EALNLVKDMKLLGIKPDVITWNALISGFSHMRN-EEKVSEILELMCLDGYKPDVVSWTSI 259
Query: 522 IHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKV 581
I + +EKA+ AF+ M G+ P+ T TLL + +I + +
Sbjct: 260 ISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGL 319
Query: 582 EGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQ 641
E + L+D + K G EA + + K T +T+N ++ YA G K +
Sbjct: 320 EDHGFVRSALLDMYGKCGFISEAMILFRKTPK----KTTVTFNSMIFCYANHGLADKAVE 375
Query: 642 LLKEMAALNLKPDSVTYSTMI 662
L +M A K D +T++ ++
Sbjct: 376 LFDQMEATGEKLDHLTFTAIL 396
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 554 TTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGK 613
++L+D + + G+ K++ S+ E V FN ++ G+A Q EA +++ +
Sbjct: 156 SSLIDMYSKFGEVGNARKVF----SDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKL 211
Query: 614 IGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXX 673
+G+ P V+T+N L++ ++ K+ ++L+ M KPD V+++++I
Sbjct: 212 LGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEK 271
Query: 674 XXXYHKQMIKSG 685
KQM+ G
Sbjct: 272 AFDAFKQMLTHG 283
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 143/345 (41%), Gaps = 45/345 (13%)
Query: 292 RNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKL 351
R + S +D+ ++NA ISG + ++A + + M+ I+PD +T + +++
Sbjct: 172 RKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISG---- 227
Query: 352 GRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIV 411
F M +EE + I++ C +G K V S
Sbjct: 228 ----------FSHMR------NEEKVSEILELMCLDGY------------KPDVVS---- 255
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
+ +++ + E+A F +M + P +AT L+ A + K + +
Sbjct: 256 WTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSV 315
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
GL+ + L+ YG+ +S+ A + +K K T+ ++ ++I Y+ G
Sbjct: 316 VTGLEDHGFVRSALLDMYGKCGFISE----AMILFRKTP-KKTTVTFNSMIFCYANHGLA 370
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE-KVEGTKVTFNI 590
+KA F+ M+ G K T+T +L AG T ++ LM ++ ++ +
Sbjct: 371 DKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYAC 430
Query: 591 LVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQ 635
+VD + G+ +EA ++I + + P + + L+ A G
Sbjct: 431 MVDLLGRAGKLVEAYEMIK---AMRMEPDLFVWGALLAACRNHGN 472
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 181/432 (41%), Gaps = 54/432 (12%)
Query: 269 RACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYES 328
R + + + G D FR + + RDV +N+ + G++E+A ++ +
Sbjct: 217 RVSNSILAVYAKCGELDFATKFFRRM----RERDVIAWNSVLLAYCQNGKHEEAVELVKE 272
Query: 329 MEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGV-----KWSEEVLGAI--- 380
MEK+ I P VT +I++ +LG+ A +KM G+ W+ + G I
Sbjct: 273 MEKEGISPGLVTWNILIGGYNQLGK-CDAAMDLMQKMETFGITADVFTWTAMISGLIHNG 331
Query: 381 ---------VKSFCAEGLVSRALIIQSEME-------------------KKGVFSNAIVY 412
K F A G+V A+ I S + K G + +V
Sbjct: 332 MRYQALDMFRKMFLA-GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVG 390
Query: 413 NTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQD 472
N+L+D + K +E+A +F +K K+V T+N ++ Y + L MQD
Sbjct: 391 NSLVDMYSKCGKLEDARKVFDSVKNKDV----YTWNSMITGYCQAGYCGKAYELFTRMQD 446
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVG-IKPTSHSYTALIHAYSVSGWH 531
L+P ++ +IS Y + + A D F +M+K G ++ + ++ +I Y +G
Sbjct: 447 ANLRPNIITWNTMISGYIKNGDEGE-AMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKK 505
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
++A F MQ P+ T +LL + + +I ++ ++ N L
Sbjct: 506 DEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNAL 565
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHP-TVMTYNMLMNAYARGGQHSKLPQLLKEMAALN 650
D +AK G +R + +G+ ++T+N L+ Y G + L +M
Sbjct: 566 TDTYAKSGDIEYSRTIF-----LGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQG 620
Query: 651 LKPDSVTYSTMI 662
+ P+ T S++I
Sbjct: 621 ITPNRGTLSSII 632
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 164/386 (42%), Gaps = 14/386 (3%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV + +S CG DA KV++SM + N+ T S M+ + R ++
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNL----FTWSAMIGAYSRENR-WREVAKL 168
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F M + GV + + I++ G V +I S + K G+ S V N+++ + K
Sbjct: 169 FRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAK 228
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
++ A F M+ ++V +N ++ AY + + + L+ EM+ G+ P +
Sbjct: 229 CGELDFATKFFRRMRERDV----IAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVT 284
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
+ LI Y + K D A D KM+ GI ++TA+I +G +A F M
Sbjct: 285 WNILIGGYNQLGK-CDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
G+ P+ T + + ++ + + + N LVD ++K G+
Sbjct: 344 FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
+AR V + V T+N ++ Y + G K +L M NL+P+ +T++TM
Sbjct: 404 EDARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTM 459
Query: 662 IYXXXXXXXXXXXXXYHKQMIKSGQV 687
I ++M K G+V
Sbjct: 460 ISGYIKNGDEGEAMDLFQRMEKDGKV 485
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 171/407 (42%), Gaps = 46/407 (11%)
Query: 292 RNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKL 351
R + S + R++ ++A I R+ + K++ M KD + PD ++
Sbjct: 135 RKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANC 194
Query: 352 GRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIV 411
G + + + G+ V +I+ + G + A M ++ V I
Sbjct: 195 G-DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDV----IA 249
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
+N+++ A+C++ EEA L EM+ + + P T+NIL+ Y++ + +L+ +M+
Sbjct: 250 WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME 309
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTS---------------- 515
G+ ++T +IS M A D F KM G+ P +
Sbjct: 310 TFGITADVFTWTAMISGL-IHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVI 368
Query: 516 ------HSY-------------TALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
HS +L+ YS G E A F++++ + + T+ ++
Sbjct: 369 NQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSM 424
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIG- 615
+ G+ +AG +++ M + +T+N ++ G+ K G EA D+ K G
Sbjct: 425 ITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGK 484
Query: 616 LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ T+N+++ Y + G+ + +L ++M P+SVT +++
Sbjct: 485 VQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 122/291 (41%), Gaps = 15/291 (5%)
Query: 404 GVFS--NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPK 461
G+F+ + V L+ + K + +A +F M+ +N+ T++ ++ AYSR + +
Sbjct: 108 GLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL----FTWSAMIGAYSRENRWR 163
Query: 462 IVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLK--MKKVGIKPTSHSYT 519
V L M G+ P + ++ D+ A + + K+G+
Sbjct: 164 EVAKLFRLMMKDGVLPDDFLFPKILQGCA---NCGDVEAGKVIHSVVIKLGMSSCLRVSN 220
Query: 520 ALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE 579
+++ Y+ G + A F M+ + + ++L + + G + +++ K M E
Sbjct: 221 SILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKE 276
Query: 580 KVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKL 639
+ VT+NIL+ G+ + G+ A D++ + G+ V T+ +++ G +
Sbjct: 277 GISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQA 336
Query: 640 PQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDV 690
+ ++M + P++VT + + H +K G + DV
Sbjct: 337 LDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDV 387
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 169/391 (43%), Gaps = 4/391 (1%)
Query: 273 VLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKD 332
+L L +AG ++++ + + + + DV Y A I L+ G + + +V++ M +D
Sbjct: 268 ILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRD 327
Query: 333 NIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSR 392
I+PD + +V + K GR + + F +M K + E+ +++ F A+G V
Sbjct: 328 EIKPDVMAYGTLVVGLCKDGRVER-GYELFMEMKGKQILIDREIYRVLIEGFVADGKVRS 386
Query: 393 ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMH 452
A + ++ G ++ +YN ++ C N V++A LF + ++P T + +M
Sbjct: 387 ACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMV 446
Query: 453 AYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIK 512
AY + N+L + ++G P ++ T ++ + MA D F +K G
Sbjct: 447 AYVVMNRLSDFSNVLERIGELGY-PVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHG 505
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI 572
S Y L+ A G +K+ F M++ G +P +Y+ + F GD +
Sbjct: 506 SVS-VYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSF 564
Query: 573 WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE-FGKIGLHPTVMTYNMLMNAYA 631
+ ++ + + L G + G+ ++ E G + P Y + +
Sbjct: 565 HEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVC 624
Query: 632 RGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+G K+ +++ EM + + V Y +I
Sbjct: 625 KGSNAEKVMKVVDEMNQEGVFINEVIYCAII 655
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 159/398 (39%), Gaps = 46/398 (11%)
Query: 303 VHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFF 362
V +YN + L+ G ++ A VYE ++D + + T I+V + K GR ++
Sbjct: 228 VFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGR-IEEMLEIL 286
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
++M K A++K+ +EG + +L + EM + + + + Y TL+ CK
Sbjct: 287 QRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKD 346
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY 482
VE LF+EMK K + + +L+ + + + NL ++ D G
Sbjct: 347 GRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGY------- 399
Query: 483 TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ 542
+ +GI Y A+I +KAY F+
Sbjct: 400 -----------------------IADIGI------YNAVIKGLCSVNQVDKAYKLFQVAI 430
Query: 543 REGIKPSIETYTTLLDGF----RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQ 598
E ++P ET + ++ + R + + + +I +L T+ F +L K
Sbjct: 431 EEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQF-FKLLCADEEKN 489
Query: 599 GQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
++ ++ G H +V YN+LM A + G K L EM L +PDS +Y
Sbjct: 490 AMALDVFYILKTKG----HGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSY 545
Query: 659 STMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
S I +H+++I+ V + +Y L
Sbjct: 546 SIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSL 583
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 1/259 (0%)
Query: 436 KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
K K K A +N + +R + + L M G P+ + LI + ++
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRG 209
Query: 496 SDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTT 555
+ + KMKK G KP Y ++ A +G+ + A +E+ + +G+ T+
Sbjct: 210 LRVYY-VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMI 268
Query: 556 LLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIG 615
L+ G +AG + M++I + M + + ++ +G + V E +
Sbjct: 269 LVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDE 328
Query: 616 LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXX 675
+ P VM Y L+ + G+ + +L EM + D Y +I
Sbjct: 329 IKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSAC 388
Query: 676 XYHKQMIKSGQVMDVDSYQ 694
+ ++ SG + D+ Y
Sbjct: 389 NLWEDLVDSGYIADIGIYN 407
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 137/330 (41%), Gaps = 13/330 (3%)
Query: 339 VTCSIMVTVMRKLGRSAKDAWYFFEKMNR-KGVKWSEEVLGAIVKSFCAEGLVSRALIIQ 397
VT SI+ V+ KLG A A FF + KG K A G A +
Sbjct: 123 VTPSIVAEVL-KLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLP 181
Query: 398 SEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFV-----EMKAKNVKPTAATFNILMH 452
M+ +G + + L+ H + GL V +MK KP +N +M
Sbjct: 182 ELMDSQGRPPSEKQFEILIRM-----HADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMD 236
Query: 453 AYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIK 512
A + + + + ++ GL + ++ L+ + ++ +M + +M++ K
Sbjct: 237 ALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEML-EILQRMRENLCK 295
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI 572
P +YTA+I G + + ++ M+R+ IKP + Y TL+ G + G + ++
Sbjct: 296 PDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYEL 355
Query: 573 WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
+ M +++ + + +L++GF G+ A ++ + G + YN ++
Sbjct: 356 FMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCS 415
Query: 633 GGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
Q K +L + L+PD T S ++
Sbjct: 416 VNQVDKAYKLFQVAIEEELEPDFETLSPIM 445
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 128/302 (42%), Gaps = 2/302 (0%)
Query: 400 MEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQ 459
M G+ + + + + + C++ V+EA+ L E+ K+ P T+N L+ +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 460 PKIVENLLAEMQD-IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSY 518
+V + EM+D +KP S+T LI K + + A K+ G KP Y
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLRE-AMYLVSKLGNAGFKPDCFLY 268
Query: 519 TALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMS 578
++ + +A ++ M+ EG++P TY TL+ G +AG + K M+
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 579 EKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSK 638
E T+ L++G ++G+ + A ++ E G P TYN L++ + K
Sbjct: 329 AGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDK 388
Query: 639 LPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKLRA 698
+L + M + +K +S Y+T++ + S + D +Y L
Sbjct: 389 GMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLET 448
Query: 699 IL 700
L
Sbjct: 449 TL 450
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 278 LGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKD-NIRP 336
L G D+ L + L D + YN + L C ++ + M D +++P
Sbjct: 169 LCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKP 228
Query: 337 DHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALII 396
D V+ +I++ + ++ ++A Y K+ G K + I+K FC S A+ +
Sbjct: 229 DLVSFTILIDNVCN-SKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 397 QSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR 456
+M+++GV + I YNTL+ K+ VEEA M +P AT+ LM+ R
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 457 RMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSH 516
+ + +LL EM+ G P +Y L+ + + M D + + MK G+K S+
Sbjct: 348 KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLM-DKGMELYEMMKSSGVKLESN 406
Query: 517 SYTALIHAYSVSGWHEKAYVAFE 539
Y L+ + SG +AY F+
Sbjct: 407 GYATLVRSLVKSGKVAEAYEVFD 429
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 157/377 (41%), Gaps = 6/377 (1%)
Query: 290 LFRNLPSSKKFR-DVHIYNAAISGLLCCGRYEDAWKVYESMEKD--NIRPDHVTCSIMVT 346
LF ++ ++ + D+ +N+ + D K+++ + K N RP T I+++
Sbjct: 71 LFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLS 130
Query: 347 -VMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGV 405
R S + M G++ + V+S C G V A + E+ +K
Sbjct: 131 HACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS 190
Query: 406 FSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK-NVKPTAATFNILMHAYSRRMQPKIVE 464
+ YN L+ CK + EM+ +VKP +F IL+ +
Sbjct: 191 PPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
L++++ + G KP Y ++ + K S+ A + KMK+ G++P +Y LI
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE-AVGVYKKMKEEGVEPDQITYNTLIFG 309
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
S +G E+A + + M G +P TYT+L++G R G++ + + + M +
Sbjct: 310 LSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPN 369
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
T+N L+ G K + ++ G+ Y L+ + + G+ ++ ++
Sbjct: 370 DCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
Query: 645 EMAALNLKPDSVTYSTM 661
D+ YST+
Sbjct: 430 YAVDSKSLSDASAYSTL 446
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/506 (21%), Positives = 206/506 (40%), Gaps = 33/506 (6%)
Query: 204 GEIVQLARNLPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQEP 263
G I + R+L + +E LA +S KE +L+ + ++ FFQ ++ P
Sbjct: 84 GVIPSILRSLDSSTDIETTLASLCLNLSPKEQTVLLKEQTRWERVLRVFRFFQSHQSYVP 143
Query: 264 SLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAW 323
+++ ++ LGRAG D+L + + + + + Y + G ++A
Sbjct: 144 NVIH---YNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEAL 200
Query: 324 KVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKS 383
+ M + PD VT + +V V + G + A FF+ V + + K+
Sbjct: 201 LWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDR-ADRFFKGWCAGKVDLDLDSIDDFPKN 259
Query: 384 FCAEGLVSRALIIQSEMEKKGVFSNAI---------------------VYNTLMDAFCKS 422
A+ V+ + E+ K G N I +NTL+D + K+
Sbjct: 260 GSAQSPVNLKQFLSMELFKVGA-RNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKA 318
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY 482
+ +A LF EM V TFN ++H E+LL +M++ G+ P +Y
Sbjct: 319 GRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTY 378
Query: 483 TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ 542
L+S + + + A + + K++KVG+ P + ++ A++H + M
Sbjct: 379 NILLSLHADAGDI-EAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMD 437
Query: 543 REGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYM 602
R I+ + ++ + G +++ + V + T ++D +A++G ++
Sbjct: 438 RNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVL-SSTTLAAVIDVYAEKGLWV 496
Query: 603 EARDVISEFGK---IGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
EA V +GK G V+ YN+++ AY + H K L K M PD TY+
Sbjct: 497 EAETVF--YGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYN 554
Query: 660 TMIYXXXXXXXXXXXXXYHKQMIKSG 685
++ +M+ SG
Sbjct: 555 SLFQMLAGVDLVDEAQRILAEMLDSG 580
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 173/402 (43%), Gaps = 13/402 (3%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVM--RKLGRSAKDAW 359
D YN +S G E A + Y + K + PD VT ++ ++ RK+ +
Sbjct: 374 DTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM---VAEVE 430
Query: 360 YFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAF 419
+M+R ++ E + I++ + EGLV +A + + V S+ + ++D +
Sbjct: 431 AVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTL-AAVIDVY 489
Query: 420 CKSNHVEEAEGLFV-EMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPT 478
+ EAE +F + + +N+++ AY + + +L M++ G P
Sbjct: 490 AEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPD 549
Query: 479 ANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF 538
+Y L + D A +M G KP +Y A+I +Y G A +
Sbjct: 550 ECTYNSLFQMLA-GVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLY 608
Query: 539 ENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQ 598
E M++ G+KP+ Y +L++GF +G + ++ +++M V+ + L+ ++K
Sbjct: 609 EAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKV 668
Query: 599 GQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKP--DSV 656
G EAR V + P V N +++ A G S+ + AL K D +
Sbjct: 669 GCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFN---ALREKGTCDVI 725
Query: 657 TYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKLRA 698
+++TM+Y ++M +SG + D S+ ++ A
Sbjct: 726 SFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMA 767
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 164/401 (40%), Gaps = 24/401 (5%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
V+ G+A + +K + LF+ + + + D YN+ L ++A ++ M
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD 578
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
+P T + M+ +LG + DA +E M + GVK +E V G+++ F G+V
Sbjct: 579 SGCKPGCKTYAAMIASYVRLGLLS-DAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVE 637
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILM 451
A+ ME+ GV SN IV +L+ A+ K +EEA ++ +MK P A N ++
Sbjct: 638 EAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML 697
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI 511
+ E++ +++ G S+ ++ Y + M D A + +M++ G+
Sbjct: 698 SLCADLGIVSEAESIFNALREKGTCDVI-SFATMMYLY-KGMGMLDEAIEVAEEMRESGL 755
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE-GIKPSIETYTTLLDGFRRAGDTQTMM 570
S+ ++ Y+ G + F M E + T+ TL ++ G
Sbjct: 756 LSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGG------ 809
Query: 571 KIWKLMMSEKVEGTKVTFN---------ILVDGFAKQGQYMEARDVISEFGKIGLHPTVM 621
+ SE V + +N I F+ G Y A + E +
Sbjct: 810 -----VPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHF 864
Query: 622 TYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
YN ++ Y+ G + M L+PD VT + ++
Sbjct: 865 AYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLV 905
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 136/341 (39%), Gaps = 36/341 (10%)
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
++ + G ++ A + SEM K GV + + +NT++ H+ EAE L +M+ K
Sbjct: 311 LIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKG 370
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
+ P T+NIL+ ++ + +++ +GL P ++ ++ ++K ++++
Sbjct: 371 ISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVE 430
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE--------------- 544
A +M + I+ HS ++ Y G +A FE Q +
Sbjct: 431 A-VIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVY 489
Query: 545 --------------------GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
G + + Y ++ + +A + + ++K M ++
Sbjct: 490 AEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPD 549
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
+ T+N L A EA+ +++E G P TY ++ +Y R G S L +
Sbjct: 550 ECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYE 609
Query: 645 EMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSG 685
M +KP+ V Y ++I Y + M + G
Sbjct: 610 AMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHG 650
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/475 (21%), Positives = 184/475 (38%), Gaps = 48/475 (10%)
Query: 215 ENLTLEEALAQYGERVSEKECWEVLE------VLGKERLLVCCLYFFQWMRAQEPSLVTP 268
+ L +E YG+R + +VLE GK +L L F+ M+ Q P
Sbjct: 492 KGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG---TWP 548
Query: 269 RACTV--LFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVY 326
CT LF +L + D+ + + S Y A I+ + G DA +Y
Sbjct: 549 DECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLY 608
Query: 327 ESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCA 386
E+MEK ++P+ V ++ + G ++A +F M GV+ + VL +++K++
Sbjct: 609 EAMEKTGVKPNEVVYGSLINGFAESGM-VEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSK 667
Query: 387 EGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAAT 446
G + A + +M+ + N+++ V EAE +F ++ K +
Sbjct: 668 VGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVIS 726
Query: 447 FNILMHAY-SRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA----- 500
F +M+ Y M + +E + EM++ GL S+ +++ Y ++S+
Sbjct: 727 FATMMYLYKGMGMLDEAIE-VAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEM 785
Query: 501 --------------DAFLKMKKVGI--KPTSHSYTALIHA------------YSVSGWHE 532
F +KK G+ + S TA A +S G +
Sbjct: 786 LVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYA 845
Query: 533 KAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILV 592
A + + + I Y ++ + +GD +K + M + +E VT LV
Sbjct: 846 YALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLV 905
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMA 647
+ K G + V S L P+ + + +AY + + KEM+
Sbjct: 906 GIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQDLADVVKKEMS 960
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 123/286 (43%), Gaps = 35/286 (12%)
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
P +NI++ A R + + EM G+ PT N+Y L+ YG+ + + +
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGK----AGLVKE 198
Query: 502 AFLKMKKVGIK---PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
A L +K +G + P + ++ + SG ++A F+ + +++ +D
Sbjct: 199 ALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDS----ID 254
Query: 559 GFRRAGDTQT--------MMKIWKLMMSEKVEGT----------------KVTFNILVDG 594
F + G Q+ M+++K+ +E + TFN L+D
Sbjct: 255 DFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDL 314
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
+ K G+ +A ++ SE K G+ +T+N +++ G S+ LLK+M + PD
Sbjct: 315 YGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPD 374
Query: 655 SVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKLRAIL 700
+ TY+ ++ Y++++ K G D +++ + IL
Sbjct: 375 TKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHIL 420
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 14/220 (6%)
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM-K 507
+L++ YS + L EM ++ + T S+ L+SAY KK+ D A F ++ +
Sbjct: 129 MLLYGYSGMAEH--AHKLFDEMPELNCERTVKSFNALLSAYVNSKKL-DEAMKTFKELPE 185
Query: 508 KVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR----- 562
K+GI P +Y +I A G + FE +++ G +P + ++ TLL+ F R
Sbjct: 186 KLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFV 245
Query: 563 AGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMT 622
GD +IW LM S+ + ++N V G + ++ +A ++I G+ P V T
Sbjct: 246 EGD-----RIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHT 300
Query: 623 YNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
YN L+ AY ++ + EM L PD+VTY +I
Sbjct: 301 YNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLI 340
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 109/247 (44%), Gaps = 38/247 (15%)
Query: 277 LLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESM-EKDNIR 335
L G +GM + LF +P R V +NA +S + + ++A K ++ + EK I
Sbjct: 131 LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGIT 190
Query: 336 PDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALI 395
PD VT + M+ K+ C +G + L
Sbjct: 191 PDLVTYNTMI------------------------------------KALCRKGSMDDILS 214
Query: 396 IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYS 455
I E+EK G + I +NTL++ F + E + ++ MK+KN+ P ++N + +
Sbjct: 215 IFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLT 274
Query: 456 RRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTS 515
R + NL+ M+ G+ P ++Y LI+AY + ++ + +MK+ G+ P +
Sbjct: 275 RNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMK-CYNEMKEKGLTPDT 333
Query: 516 HSYTALI 522
+Y LI
Sbjct: 334 VTYCMLI 340
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 146/357 (40%), Gaps = 41/357 (11%)
Query: 291 FRNLPSSKKFRDVH-IYNAAISGLLCCGRYEDAWKVYESMEK-DNIRPDHVTCSIMVTVM 348
F+ S+ FR VH +Y+A I L ++ +V + +K D+I+ + IM+ +
Sbjct: 74 FKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIML--L 131
Query: 349 RKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEM-EKKGVFS 407
A+ A F++M + + + A++ ++ + A+ E+ EK G+
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
+ + YNT++ A C+ +++ +F E++ +P +FN L+ + RR + +
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW 251
Query: 468 AEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSV 527
M+ L P SY + R KK +T ++ V
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKK-----------------------FTDALNLIDV 288
Query: 528 SGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVT 587
M+ EGI P + TY L+ +R + + +MK + M + + VT
Sbjct: 289 -------------MKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVT 335
Query: 588 FNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
+ +L+ K+G A +V E K L Y ++ G+ + QL+K
Sbjct: 336 YCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 2/225 (0%)
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM-QDIGLKPTAN 480
S E A LF EM N + T +FN L+ AY + E+ + +G+ P
Sbjct: 135 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
+Y +I A R+ M D+ + F +++K G +P S+ L+ + + ++
Sbjct: 195 TYNTMIKALCRKGSMDDILS-IFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDL 253
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
M+ + + P+I +Y + + G R + + +M +E + T+N L+ +
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 645
E +E + GL P +TY ML+ + G + ++ +E
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 120/291 (41%), Gaps = 5/291 (1%)
Query: 375 EVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVE 434
+VL I++ +C L + + + +N L+DA CK V+E E L
Sbjct: 200 DVLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRR 259
Query: 435 MKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKK 494
M+ + VKP A TFN+L + R PK LL EM + G KP +Y I + Q
Sbjct: 260 MRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFC-QAG 317
Query: 495 MSDMAADAFLKMKKVGIK---PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIE 551
M D AAD F M G PT+ ++ +I A + + E+ + M G P +
Sbjct: 318 MVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVS 377
Query: 552 TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF 611
TY +++G A K M ++ VT+N + + + EA +
Sbjct: 378 TYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRM 437
Query: 612 GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ P+V TYNML++ + EM + D TY MI
Sbjct: 438 VESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMI 488
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 134/285 (47%), Gaps = 3/285 (1%)
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVM-RKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAI 380
A + ++ M+ + P T ++TV+ K GR+ ++A F +M R G E++
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 381 VKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV 440
+ C G A + K G F + Y+ + A C+ +EEA + +
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIG-FPVTVAYSIYIRALCRIGKLEEALSELASFEGERS 850
Query: 441 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA 500
T+ ++H +R + + + M++IG KP + YT LI + ++K++ +
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQL-EKVL 909
Query: 501 DAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
+ KM+ +P+ +YTA+I Y G E+A+ AF NM+ G P +TY+ ++
Sbjct: 910 ETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCL 969
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
+A ++ +K+ M+ + + + + F + G ++G++ AR
Sbjct: 970 CQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLAR 1014
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 134/316 (42%), Gaps = 8/316 (2%)
Query: 352 GRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIV 411
G+ K F +M R+G +++ ++ + GL + A+ EM+ G+ ++
Sbjct: 691 GKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSST 750
Query: 412 YNTLMDAFC--KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
+ L+ C K +VEEA F EM P + K ++ L
Sbjct: 751 FKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDS 810
Query: 470 MQDIGLKPTANSYTCLISAYGRQKKMSDMAAD--AFLKMKKVGIKPTSHSYTALIHAYSV 527
+ IG P +Y+ I A R K+ + ++ +F + + ++Y +++H
Sbjct: 811 LGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSL---LDQYTYGSIVHGLLQ 866
Query: 528 SGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVT 587
G +KA +M+ G KP + YT+L+ F + + +++ + M E E + VT
Sbjct: 867 RGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVT 926
Query: 588 FNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMA 647
+ ++ G+ G+ EA + + G P TY+ +N + + +LL EM
Sbjct: 927 YTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEML 986
Query: 648 ALNLKPDSVTYSTMIY 663
+ P ++ + T+ Y
Sbjct: 987 DKGIAPSTINFRTVFY 1002
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 148/332 (44%), Gaps = 3/332 (0%)
Query: 269 RACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYES 328
R T+L + G+A K +++F + S D YN I L GR + A + Y+
Sbjct: 225 RTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKE 284
Query: 329 MEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEG 388
M + I T +++ + K + M R + G ++KSFC G
Sbjct: 285 MMEKGITFGLRTYKMLLDCIAK-SEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSG 343
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
+ AL + E++ K + +A + L+ C++N + +A + MK + + + +
Sbjct: 344 KIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSN-VYG 402
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK 508
I++ Y R+ ++ G P ++YT ++ + K+ + + F +M +
Sbjct: 403 IIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQF-EKGCNLFNEMIE 461
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
GI+P S + TA++ + +A+ F +M+ +GIKP+ ++Y+ + R+
Sbjct: 462 NGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDE 521
Query: 569 MMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
++KI+ M + K+ F+ ++ K G+
Sbjct: 522 IIKIFNQMHASKIVIRDDIFSWVISSMEKNGE 553
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 120/297 (40%), Gaps = 2/297 (0%)
Query: 401 EKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQP 460
++ G N+ YN + ++ LF EM+ + T T+ I++ Y R
Sbjct: 670 KRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLT 729
Query: 461 KIVENLLAEMQDIGLKPTANSYTCLISAYGRQK-KMSDMAADAFLKMKKVGIKPTSHSYT 519
I EM+D+GL P+++++ CLI+ +K + + A F +M + G P
Sbjct: 730 NIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQ 789
Query: 520 ALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE 579
+ G + A +++ + G P Y+ + R G + + E
Sbjct: 790 DYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGE 848
Query: 580 KVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKL 639
+ + T+ +V G ++G +A D ++ +IG P V Y L+ + + Q K+
Sbjct: 849 RSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKV 908
Query: 640 PQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+ ++M + +P VTY+ MI + M + G D +Y K
Sbjct: 909 LETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKF 965
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 188/451 (41%), Gaps = 18/451 (3%)
Query: 202 VVGEIVQLARNLPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQ 261
VV EI + R +++E+ L + R + VL+ K L + FF W++ +
Sbjct: 125 VVHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLA--MRFFNWVKQK 182
Query: 262 EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED 321
+ + + G A D + L + + +D+ + IS +
Sbjct: 183 DGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGK 242
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIV 381
V+E M K D +IM+ + GR A F+++M KG+ + ++
Sbjct: 243 GLLVFEKMRKSGFELDATAYNIMIRSLCIAGR-GDLALEFYKEMMEKGITFGLRTYKMLL 301
Query: 382 KSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK 441
V I +M + S + L+ +FC S ++EA L E+K K +
Sbjct: 302 DCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMC 361
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLK---PTANSYTCLISAYGRQKKMSDM 498
A F IL+ R ++V+ L E+ DI + +N Y +IS Y RQ +S
Sbjct: 362 LDAKYFEILVKGLCR--ANRMVDAL--EIVDIMKRRKLDDSNVYGIIISGYLRQNDVSK- 416
Query: 499 AADAFLKMKKVGIKPTSHSYTALI-HAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
A + F +KK G P +YT ++ H + + + EK F M GI+P T ++
Sbjct: 417 ALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQF-EKGCNLFNEMIENGIEPDSVAITAVV 475
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF--GKIG 615
G K++ M + ++ T +++I V + +Y E + ++ KI
Sbjct: 476 AGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIV 535
Query: 616 LHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
+ + ++ ++++ + G+ K+ L+KE+
Sbjct: 536 IRDDIFSW--VISSMEKNGEKEKI-HLIKEI 563
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 115/265 (43%), Gaps = 2/265 (0%)
Query: 398 SEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRR 457
SEMEK G + + L+ + K+ + + +F +M+ + A +NI++ +
Sbjct: 213 SEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIA 272
Query: 458 MQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHS 517
+ + EM + G+ +Y L+ + +K+ D+ M ++ +
Sbjct: 273 GRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKV-DVVQSIADDMVRICEISEHDA 331
Query: 518 YTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMM 577
+ L+ ++ VSG ++A ++ + + + + L+ G RA ++I +M
Sbjct: 332 FGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMK 391
Query: 578 SEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHS 637
K++ + V + I++ G+ +Q +A + K G P V TY +M + Q
Sbjct: 392 RRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFE 450
Query: 638 KLPQLLKEMAALNLKPDSVTYSTMI 662
K L EM ++PDSV + ++
Sbjct: 451 KGCNLFNEMIENGIEPDSVAITAVV 475
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/381 (19%), Positives = 134/381 (35%), Gaps = 73/381 (19%)
Query: 303 VHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFF 362
V IYN +S + ++ MEK+ D T +I+++V K + K F
Sbjct: 189 VGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGK-GLLVF 247
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
EKM + G + +++S C G AL EM +KG+ Y L+D KS
Sbjct: 248 EKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKS 307
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY 482
V+ + + +M F L+ ++ + K L+ E+++ + A +
Sbjct: 308 EKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYF 367
Query: 483 TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ 542
L+ R +M D A + M+
Sbjct: 368 EILVKGLCRANRMVD------------------------------------ALEIVDIMK 391
Query: 543 REGIKPSIETYTTLLDGFRRAGD-----------------------TQTMMKIWKL---- 575
R + S Y ++ G+ R D T+ M ++KL
Sbjct: 392 RRKLDDS-NVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFE 450
Query: 576 --------MMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLM 627
M+ +E V +V G Q + EA V S + G+ PT +Y++ +
Sbjct: 451 KGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFV 510
Query: 628 NAYARGGQHSKLPQLLKEMAA 648
R ++ ++ ++ +M A
Sbjct: 511 KELCRSSRYDEIIKIFNQMHA 531
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 92/227 (40%), Gaps = 16/227 (7%)
Query: 451 MHAYSRRMQPKIVENLLAEM---------------QDIGLKPTANSYTCLISAYGRQKKM 495
+ S R +P+IVEN+L Q G Y ++S G + +
Sbjct: 146 LEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNL 205
Query: 496 SDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTT 555
DM + +M+K G ++T LI Y + K + FE M++ G + Y
Sbjct: 206 -DMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNI 264
Query: 556 LLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIG 615
++ AG ++ +K MM + + T+ +L+D AK + + + + +I
Sbjct: 265 MIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRIC 324
Query: 616 LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ L+ ++ G+ + +L++E+ + D+ + ++
Sbjct: 325 EISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILV 371
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 108/519 (20%), Positives = 193/519 (37%), Gaps = 81/519 (15%)
Query: 235 CWEVLEVLGKERLLVCCLYFFQWMRAQEP---SLVTPRACTV--LFPLLGRAGMGDKLMV 289
CW L+ L F+ M+ + S P CT L +L G ++
Sbjct: 260 CWGDLDA---------ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALI 310
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRY--EDAWKVYESMEKDNIRPDHVTCSIMVTV 347
++ L S D Y I G CC Y +DA ++Y M+ + PD + + ++
Sbjct: 311 VWDELKVSGHEPDNSTYRILIQG--CCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDG 368
Query: 348 MRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFS 407
K R +A FEKM ++GV+ S ++ G + +++KKG F
Sbjct: 369 TLK-ARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFV 427
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
+AI ++ + C+ +E A L EM+ + T + L+ + ++ + E L+
Sbjct: 428 DAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLM 487
Query: 468 AEMQDIGLK----------------------------PTANSYTCLISAYGRQ------K 493
+++ L P+ S+ ++S G + +
Sbjct: 488 KHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAE 547
Query: 494 KMSDMAAD----------------------AFLKMKKVGIKPTSHSY---TALIHAYSVS 528
++S M D + ++V KP S + Y
Sbjct: 548 EVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSK 607
Query: 529 GWHEKAYVAFENMQREGIKPSIETYT--TLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKV 586
G A FE G+ + +YT +++ F + G QT + M
Sbjct: 608 GDLSLACKLFEIFNGMGV-TDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIA 666
Query: 587 TFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
T+N+++ G K G+ A V+ K G + ++ YN L+NA + + + QL M
Sbjct: 667 TYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHM 726
Query: 647 AALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSG 685
+ + PD V+Y+TMI Y K M+ +G
Sbjct: 727 KSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAG 765
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 122/274 (44%), Gaps = 12/274 (4%)
Query: 270 ACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFR-DVHIYNAAISGLLCCGRYEDAWKVYES 328
A L L RA M + +F L K+F+ D YN I G C G + A +++
Sbjct: 214 AVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKE 273
Query: 329 MEK------DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVK 382
M++ + PD T + ++ V+ G+ AKDA ++++ G + +++
Sbjct: 274 MKERSSVYGSSFGPDICTYNSLIHVLCLFGK-AKDALIVWDELKVSGHEPDNSTYRILIQ 332
Query: 383 SFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKP 442
C + A+ I EM+ G + IVYN L+D K+ V EA LF +M + V+
Sbjct: 333 GCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRA 392
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADA 502
+ T+NIL+ R + + L +++ G A +++ + R+ K+ + A
Sbjct: 393 SCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKL-EGAVKL 451
Query: 503 FLKMKKVGIKPTSHSYTALIHAYSVSG---WHEK 533
+M+ G + ++L+ + G W EK
Sbjct: 452 VEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEK 485
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 170/421 (40%), Gaps = 34/421 (8%)
Query: 252 LYFFQWMRAQEPSLV-TPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAI 310
L FF+W + P + A + +F + R G+ ++ L ++ D + +
Sbjct: 75 LDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILL 134
Query: 311 SGLLCCGRYEDAWKVYESMEK--DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRK 368
L+ G++E A V + ME+ D + P V S+++ +++K + A K+
Sbjct: 135 DSLIRSGKFESALGVLDYMEELGDCLNP-SVYDSVLIALVKK--HELRLALSILFKLLEA 191
Query: 369 GVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEA 428
S++ G R +I+ + N L+ +++ E
Sbjct: 192 SDNHSDDDTG-------------RVIIVS-------YLPGTVAVNELLVGLRRADMRSEF 231
Query: 429 EGLFVEMKA-KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQD------IGLKPTANS 481
+ +F ++K K K ++NI +H + +L EM++ P +
Sbjct: 232 KRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICT 291
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y LI K D A + ++K G +P + +Y LI S + A + M
Sbjct: 292 YNSLIHVLCLFGKAKD-ALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEM 350
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
Q G P Y LLDG +A ++++ M+ E V + T+NIL+DG + G+
Sbjct: 351 QYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRA 410
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
+ + K G +T++++ R G+ +L++EM D VT S++
Sbjct: 411 EAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSL 470
Query: 662 I 662
+
Sbjct: 471 L 471
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 133/350 (38%), Gaps = 25/350 (7%)
Query: 367 RKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVE 426
R G K S I ++ C GL+ + M++ GV + + L+D+ +S E
Sbjct: 85 RPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFE 144
Query: 427 EAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM---------QDIG--- 474
A G+ M+ + ++ ++ A ++ + ++ ++L ++ D G
Sbjct: 145 SALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVI 204
Query: 475 ----LKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVG-IKPTSHSYTALIHAYSVSG 529
L T L+ R+ M F K+K + K + SY IH + G
Sbjct: 205 IVSYLPGTVAVNELLVGL--RRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWG 262
Query: 530 WHEKAYVAFENMQRE------GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEG 583
+ A F+ M+ P I TY +L+ G + + +W + E
Sbjct: 263 DLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEP 322
Query: 584 TKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLL 643
T+ IL+ G K + +A + E G P + YN L++ + + ++ QL
Sbjct: 323 DNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLF 382
Query: 644 KEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSY 693
++M ++ TY+ +I + K GQ +D ++
Sbjct: 383 EKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITF 432
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
YN++M +F K + + A G+ +M AT+N+++ + + + +L +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
G Y LI+A G+ ++ D A F MK GI P SY +I S +G
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRL-DEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 532 EKAYVAFENMQREGIKPSIETYTTL 556
++AY + M G P+ T T L
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 15/125 (12%)
Query: 376 VLGAIVKSFCAEGLVSRALIIQS---------------EMEKKGVFSNAIVYNTLMDAFC 420
VL + ++FCA + + +IIQ + K+G + + ++YNTL++A
Sbjct: 652 VLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALG 711
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
K+ ++EA LF MK+ + P ++N ++ S+ + K L M D G P
Sbjct: 712 KATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHV 771
Query: 481 SYTCL 485
+ T L
Sbjct: 772 TDTIL 776
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 115/241 (47%), Gaps = 6/241 (2%)
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMK---AKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
+Y TLM + K+ V + + M+ +N P T+ ++ A+ +L
Sbjct: 416 IYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVL 475
Query: 468 AEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM-KKVGIKPTSHSYTALIHAYS 526
AEM +G+ +Y L+ Y +Q ++ D A D +M + GI+P SY +I
Sbjct: 476 AEMARMGVPANRITYNVLLKGYCKQLQI-DRAEDLLREMTEDAGIEPDVVSYNIIIDGCI 534
Query: 527 VSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE-KVEGTK 585
+ A F M+ GI P+ +YTTL+ F +G + +++ MM++ +V+
Sbjct: 535 LIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDL 594
Query: 586 VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 645
+ +N+LV+G+ + G +A+ V+S + G +P V TY L N ++ + L KE
Sbjct: 595 IAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKE 654
Query: 646 M 646
+
Sbjct: 655 I 655
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 110/245 (44%), Gaps = 9/245 (3%)
Query: 336 PDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWS---EEVLGAIVKSFCAEGLVSR 392
PD + ++ K GR A D E M R+ + S E +V +F GL+ R
Sbjct: 412 PDSRIYTTLMKGYMKNGRVA-DTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 393 ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM-KAKNVKPTAATFNILM 451
A + +EM + GV +N I YN L+ +CK ++ AE L EM + ++P ++NI++
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGR--QKKMSDMAADAFLKMKKV 509
EM+ G+ PT SYT L+ A+ Q K+++ D + +V
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
+ ++ L+ Y G E A M+ G P++ TY +L +G +A
Sbjct: 591 KVDLI--AWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDA 648
Query: 570 MKIWK 574
+ +WK
Sbjct: 649 LLLWK 653
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 164/405 (40%), Gaps = 49/405 (12%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D +NA ++ G + WK++E M + + PD +T ++M+ + ++GR K+ F
Sbjct: 235 DTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGR--KELIVF 292
Query: 362 -FEKMNRKGVKWSEEVLGAIVKSFCAEG-LVSRALIIQSEMEKKGVFSNAI--------- 410
E++ KG+K + ++V ++ G L + I+Q+ EK+ +
Sbjct: 293 VLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLK 352
Query: 411 -------------VYNTLMDAFCKSNHVEEAEG---LFVEMKAKNVKPT----------- 443
+ + + V E EG +F ++ +V P+
Sbjct: 353 EKEEEEAEDDEDAFEDDEDSGYSARDEVSE-EGVVDVFKKLLPNSVDPSGEPPLLPKVFA 411
Query: 444 --AATFNILMHAYSRRMQPKIVENLLAEMQ---DIGLKPTANSYTCLISAYGRQKKMSDM 498
+ + LM Y + + +L M+ D P +YT ++SA+ M D
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLM-DR 470
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE-GIKPSIETYTTLL 557
A +M ++G+ +Y L+ Y ++A M + GI+P + +Y ++
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE-FGKIGL 616
DG D+ + + M + + TK+++ L+ FA GQ A V E +
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
++ +NML+ Y R G +++ M P+ TY ++
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSL 635
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 123/296 (41%), Gaps = 41/296 (13%)
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
+ +N +++A ++ LF EM + +P T+N+++ +R + +++ +L
Sbjct: 235 DTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFVL 294
Query: 468 AEMQDIGLKPTANSYTCLISAY-----------------GRQKKMSDMAADAFLKMKKVG 510
+ D G+K + L++AY +++ + + + + K
Sbjct: 295 ERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKEK 354
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVA-------FENMQREGIKPSIE------------ 551
+ + SG+ + V+ F+ + + PS E
Sbjct: 355 EEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDS 414
Query: 552 -TYTTLLDGFRRAG---DTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDV 607
YTTL+ G+ + G DT M++ + +VT+ +V F G AR V
Sbjct: 415 RIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQV 474
Query: 608 ISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA-LNLKPDSVTYSTMI 662
++E ++G+ +TYN+L+ Y + Q + LL+EM ++PD V+Y+ +I
Sbjct: 475 LAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 143/319 (44%), Gaps = 4/319 (1%)
Query: 346 TVMRKLGRSAKDAWYF--FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKK 403
++R LGR ++ + M +GV E L + SF V RA+ + E E
Sbjct: 156 VILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESF 215
Query: 404 GVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIV 463
GV + +N L+ C+ +HV A+ +F K N+ + ++NI++ +S+ + + +
Sbjct: 216 GVKCSTESFNALLRCLCERSHVSAAKSVF-NAKKGNIPFDSCSYNIMISGWSKLGEVEEM 274
Query: 464 ENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIH 523
E +L EM + G P SY+ LI GR +++D + + F +K G P ++ Y A+I
Sbjct: 275 EKVLKEMVESGFGPDCLSYSHLIEGLGRTGRIND-SVEIFDNIKHKGNVPDANVYNAMIC 333
Query: 524 AYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEG 583
+ + +++ + M E +P++ETY+ L+ G + ++I++ M+S V
Sbjct: 334 NFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLP 393
Query: 584 TKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLL 643
T + G A + + K G + Y +L+ +R G+ L +
Sbjct: 394 TTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVW 453
Query: 644 KEMAALNLKPDSVTYSTMI 662
EM D Y ++
Sbjct: 454 DEMQESGYPSDVEVYEYIV 472
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 5/283 (1%)
Query: 339 VTCSIMVTVMRKLGRSAKDAWYFFEKMNRK-GVKWSEEVLGAIVKSFCAEGLVSRALIIQ 397
++ I+ V+ + S + FF+ R+ GV I+++ L S + +
Sbjct: 115 LSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVL 174
Query: 398 SEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRR 457
M +GV + MD+F + ++V A LF E ++ VK + +FN L+ R
Sbjct: 175 KGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCER 234
Query: 458 MQPKIVENLL-AEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSH 516
+++ A+ +I SY +IS + + ++ +M +M + G P
Sbjct: 235 SHVSAAKSVFNAKKGNIPFDSC--SYNIMISGWSKLGEVEEMEK-VLKEMVESGFGPDCL 291
Query: 517 SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM 576
SY+ LI +G + F+N++ +G P Y ++ F A D M+ ++ M
Sbjct: 292 SYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRM 351
Query: 577 MSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPT 619
+ E+ E T++ LV G K + +A ++ E G+ PT
Sbjct: 352 LDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPT 394
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 151/394 (38%), Gaps = 46/394 (11%)
Query: 273 VLFPLLGRAGMGDKLMVLFRNLPSSKK--FRDVHIYNAAISGLLCCGR---YEDAWKVYE 327
++ +L R + + MV F + + +DV Y+ + L GR + V +
Sbjct: 119 IVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRAL---GRRKLFSFMMDVLK 175
Query: 328 SMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAE 387
M + + PD +I + ++ + A FE+ GVK S E A+++ C
Sbjct: 176 GMVCEGVNPDLECLTIAMDSFVRV-HYVRRAIELFEESESFGVKCSTESFNALLRCLCER 234
Query: 388 GLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATF 447
VS A + + +K + ++ YN ++ + K VEE E + EM P ++
Sbjct: 235 SHVSAAKSVFN-AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSY 293
Query: 448 NILMHAYSR--RMQPKI---------------------VENLLA------------EMQD 472
+ L+ R R+ + + N ++ M D
Sbjct: 294 SHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLD 353
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHE 532
+P +Y+ L+S + +K+SD A + F +M G+ PT+ T+ + G
Sbjct: 354 EECEPNLETYSKLVSGLIKGRKVSD-ALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPH 412
Query: 533 KAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILV 592
A V ++ ++ G + S Y LL R G ++ +W M + +V
Sbjct: 413 AAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIV 472
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
DG G A V+ E + G P Y+ L
Sbjct: 473 DGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRL 506
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 93/223 (41%), Gaps = 2/223 (0%)
Query: 474 GLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEK 533
G+ SY+ ++ A GR+K S M D M G+ P T + ++ + +
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMM-DVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRR 204
Query: 534 AYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVD 593
A FE + G+K S E++ LL ++ + ++NI++
Sbjct: 205 AIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKG-NIPFDSCSYNIMIS 263
Query: 594 GFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKP 653
G++K G+ E V+ E + G P ++Y+ L+ R G+ + ++ + P
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 654 DSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
D+ Y+ MI Y+++M+ ++++Y KL
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKL 366
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 133/313 (42%), Gaps = 36/313 (11%)
Query: 305 IYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEK 364
YN + L +++ ++ M KD + D++T S ++T ++ K A +FE+
Sbjct: 188 FYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNK-AIEWFER 246
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
M + G+ E AI+ + G V L + G +AI ++ L F ++
Sbjct: 247 MYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGD 306
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
+ + EMK+ +VKP +N L+ A R +P + +L EM + GL P + T
Sbjct: 307 YDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTA 366
Query: 485 LISAYGRQKKMSD-------------------------MAADA---------FLKMKK-V 509
L+ YG+ + D M AD F MK+ V
Sbjct: 367 LVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESV 426
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
+P + SYTA+++ Y G EKA FE M + G++ ++ T L+ +A +
Sbjct: 427 QCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDV 486
Query: 570 MKIWKLMMSEKVE 582
+ ++ L + V+
Sbjct: 487 VYVFDLSIKRGVK 499
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 2/233 (0%)
Query: 431 LFVEMKAKNVKPTAATF-NILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY 489
F +K+K++ P F N+ M + Q +++E + EM G++ +Y+ +I+
Sbjct: 172 FFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITC- 230
Query: 490 GRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPS 549
++ + + A + F +M K G+ P +Y+A++ YS SG E+ +E G KP
Sbjct: 231 AKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPD 290
Query: 550 IETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVIS 609
++ L F AGD + + + M S V+ V +N L++ + G+ AR + +
Sbjct: 291 AIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFN 350
Query: 610 EFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
E + GL P T L+ Y + QL +EM A D + Y+T++
Sbjct: 351 EMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLL 403
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 113/249 (45%), Gaps = 2/249 (0%)
Query: 399 EMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRM 458
EM K GV + I Y+T++ + N +A F M + P T++ ++ YS+
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 459 QPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSY 518
+ + V +L G KP A +++ L +G D +MK + +KP Y
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDY-DGIRYVLQEMKSMDVKPNVVVY 329
Query: 519 TALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMS 578
L+ A +G A F M G+ P+ +T T L+ + +A + +++W+ M +
Sbjct: 330 NTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKA 389
Query: 579 EKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGK-IGLHPTVMTYNMLMNAYARGGQHS 637
+K + +N L++ A G EA + ++ + + P +Y ++N Y GG+
Sbjct: 390 KKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAE 449
Query: 638 KLPQLLKEM 646
K +L +EM
Sbjct: 450 KAMELFEEM 458
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 172/411 (41%), Gaps = 46/411 (11%)
Query: 280 RAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHV 339
R + +K + F + + D Y+A + G+ E+ +YE +PD +
Sbjct: 233 RCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAI 292
Query: 340 TCSIM--------------------------------VTVMRKLGRSAKD--AWYFFEKM 365
S++ T++ +GR+ K A F +M
Sbjct: 293 AFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM 352
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
G+ +E+ L A+VK + AL + EM+ K + I+YNTL++
Sbjct: 353 LEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLE 412
Query: 426 EEAEGLFVEMK-AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
EEAE LF +MK + +P ++ +++ Y + + L EM G++ TC
Sbjct: 413 EEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTC 472
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE 544
L+ G+ K++ D+ L +K+ G+KP L+ ++ E A ++R
Sbjct: 473 LVQCLGKAKRIDDVVYVFDLSIKR-GVKPDDRLCGCLLSVMALCESSEDAEKVMACLERA 531
Query: 545 GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMM-SEKVEGTKVTFNILVDGFAKQGQYME 603
K + T+ L+ + +T+ + +KL++ + +VE + N L+D ++
Sbjct: 532 NKK--LVTFVNLI--VDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHER 587
Query: 604 ARDVISEFGKIGLHP-----TVMTYNMLMNAYARGGQHSKLPQLLKEMAAL 649
A +++ GL+P T+ +++ + + + G + L + ++ +A +
Sbjct: 588 AHELLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANI 638
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 151/330 (45%), Gaps = 14/330 (4%)
Query: 342 SIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEM- 400
++++ V+ ++ RS A F++MN +G + ++K FC EG + A + M
Sbjct: 156 NLLMKVLCQVNRSDL-ASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMF 214
Query: 401 ---EKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRR 457
+KG + +VY L+DA C + V++A + ++ K +K ++ + +
Sbjct: 215 WRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWES 274
Query: 458 MQPKI--VENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTS 515
I V+ LL E G P +SY+ + + + K+ + + L M+ G +PT
Sbjct: 275 SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVE-GEEVLLAMRSKGFEPTP 333
Query: 516 HSYTALIHAYSVSG-WHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK 574
Y A + A +G E V + M + P++ Y L+ G D ++M +
Sbjct: 334 FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGL--CDDGKSMEAVGY 391
Query: 575 LM-MSEKVE--GTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYA 631
L MS++V + T+ LVDG + GQ++EA V+ E P V TY+M++
Sbjct: 392 LKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC 451
Query: 632 RGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
+ + L+EM + ++ P+S + +
Sbjct: 452 DMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 151/330 (45%), Gaps = 14/330 (4%)
Query: 342 SIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEM- 400
++++ V+ ++ RS A F++MN +G + ++K FC EG + A + M
Sbjct: 156 NLLMKVLCQVNRSDL-ASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMF 214
Query: 401 ---EKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRR 457
+KG + +VY L+DA C + V++A + ++ K +K ++ + +
Sbjct: 215 WRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWES 274
Query: 458 MQPKI--VENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTS 515
I V+ LL E G P +SY+ + + + K+ + + L M+ G +PT
Sbjct: 275 SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVE-GEEVLLAMRSKGFEPTP 333
Query: 516 HSYTALIHAYSVSG-WHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK 574
Y A + A +G E V + M + P++ Y L+ G D ++M +
Sbjct: 334 FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGL--CDDGKSMEAVGY 391
Query: 575 LM-MSEKVE--GTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYA 631
L MS++V + T+ LVDG + GQ++EA V+ E P V TY+M++
Sbjct: 392 LKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC 451
Query: 632 RGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
+ + L+EM + ++ P+S + +
Sbjct: 452 DMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 139/305 (45%), Gaps = 19/305 (6%)
Query: 376 VLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM 435
V ++KS + A+++ ++ +G+ + N L+ + ++ E+
Sbjct: 164 VFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREV 223
Query: 436 ---------KAKN----VKPTAATFNILMHAYSRRMQPKIVENLLAEMQD-IGLKPTANS 481
+AK +KP A TFN +M ++ R + ++VE + EM++ +G P S
Sbjct: 224 FGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYS 283
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y L+ AY + MS+ A + +MK G+ +Y +I + KA F +M
Sbjct: 284 YNVLMEAYCARGLMSE-AEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFA--KQG 599
+GI+ + TY L++G+ +AGD + + +++ M + E +T LV+G + G
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDG 402
Query: 600 Q-YMEARDVISEFGKIGL-HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
Q +EA D++ + + + +P+ Y +L+ G+ + + EM KP T
Sbjct: 403 QRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQET 462
Query: 658 YSTMI 662
Y I
Sbjct: 463 YRAFI 467
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
+++++CA GL+S A + EM+ +GV + + YNT++ C + V +A+ LF +M K
Sbjct: 287 LMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKG 346
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY------GRQK 493
++ T T+ L++ Y + + EM+ G + + L+ R
Sbjct: 347 IECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVV 406
Query: 494 KMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETY 553
+ +D+ DA +++ P+ + Y L+ G ++A M +G KPS ETY
Sbjct: 407 EAADIVKDA---VREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETY 463
Query: 554 TTLLDGFRRAGDTQT 568
+DG+ GD +T
Sbjct: 464 RAFIDGYGIVGDEET 478
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 112/258 (43%), Gaps = 26/258 (10%)
Query: 407 SNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENL 466
S V++ L+ + S ++ A + +++++ + +T N L+ SRR
Sbjct: 160 SAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRR--------- 210
Query: 467 LAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVG-IKPTSHSYTALIHAY 525
+ +N Y +G + D++ D KM +G IKP + ++ +++ ++
Sbjct: 211 ---------RGASNGYKMYREVFG----LDDVSVDEAKKM--IGKIKPNATTFNSMMVSF 255
Query: 526 SVSGWHEKAYVAFENMQRE-GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
G E + M+ E G P++ +Y L++ + G K+W+ M V
Sbjct: 256 YREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYD 315
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
V +N ++ G + ++A+++ + G G+ T +TY L+N Y + G + +
Sbjct: 316 IVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYR 375
Query: 645 EMAALNLKPDSVTYSTMI 662
EM + D +T ++
Sbjct: 376 EMKRKGFEADGLTIEALV 393
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 123/291 (42%), Gaps = 1/291 (0%)
Query: 373 SEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLF 432
S +V + +++ L S A + M + G+ + L+ + C HV A+ F
Sbjct: 137 SSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFF 196
Query: 433 VEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQ 492
+ K + P+A T++IL+ ++R + EM + +Y L+ A +
Sbjct: 197 GKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKS 256
Query: 493 KKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIET 552
+ D F +M +G+KP ++S+ IHAY +G AY + M+R + P++ T
Sbjct: 257 GDV-DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYT 315
Query: 553 YTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFG 612
+ ++ + + M+ + T+N ++ + A ++S
Sbjct: 316 FNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMD 375
Query: 613 KIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
+ P TYNM++ R G+ + ++ + M+ P TY+ MI+
Sbjct: 376 RTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIH 426
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 119/290 (41%), Gaps = 8/290 (2%)
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
FF K G+ S + +V+ + S A + EM ++ + + YN L+DA C
Sbjct: 195 FFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALC 254
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
KS V+ +F EM +KP A +F I +HAY +L M+ L P
Sbjct: 255 KSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVY 314
Query: 481 SYTCLISAYGRQKKMSDMAADAFL---KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
++ +I + +K+ DA+L +M + G P + +Y +++ + +A
Sbjct: 315 TFNHIIKTLCKNEKVD----DAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKL 370
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFA- 596
M R P TY +L R G +IW+ M K T T+ +++ G
Sbjct: 371 LSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVR 430
Query: 597 KQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
K+G+ EA G+ P T ML N GQ + L +M
Sbjct: 431 KKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 106/254 (41%), Gaps = 2/254 (0%)
Query: 446 TFNILMHAYSRRMQPKIVENLLAEMQDIG-LKPTANSYTCLISAYGRQKKMSDMAADAFL 504
+++IL+ Q ++ + L E ++ + ++ + + AY R S+ A AF
Sbjct: 104 SYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSE-ACRAFN 162
Query: 505 KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAG 564
+M + GIKP L+H+ A F + GI PS +TY+ L+ G+ R
Sbjct: 163 RMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIR 222
Query: 565 DTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYN 624
D K++ M+ + +N L+D K G + E G +GL P ++
Sbjct: 223 DASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFA 282
Query: 625 MLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKS 684
+ ++AY G ++L M +L P+ T++ +I +MI+
Sbjct: 283 IFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQK 342
Query: 685 GQVMDVDSYQKLRA 698
G D +Y + A
Sbjct: 343 GANPDTWTYNSIMA 356
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 115/277 (41%), Gaps = 4/277 (1%)
Query: 334 IRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRA 393
I P T SI+V ++ R A A F++M + A++ + C G V
Sbjct: 204 IVPSAKTYSILVRGWARI-RDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA 453
+ EM G+ +A + + A+C + V A + MK ++ P TFN ++
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
Query: 454 YSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKP 513
+ + LL EM G P +Y ++ AY + A +M + P
Sbjct: 323 LCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIM-AYHCDHCEVNRATKLLSRMDRTKCLP 381
Query: 514 TSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF-RRAGDTQTMMKI 572
H+Y ++ G ++A +E M P++ TYT ++ G R+ G + +
Sbjct: 382 DRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRY 441
Query: 573 WKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVIS 609
+++M+ E + T +L + GQ M+ DV++
Sbjct: 442 FEMMIDEGIPPYSTTVEMLRNRLVGWGQ-MDVVDVLA 477
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 3/229 (1%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ YNA + L G + +K+++ M ++PD + +I + G A+
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAG-DVHSAYKV 300
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
++M R + + I+K+ C V A ++ EM +KG + YN++M C
Sbjct: 301 LDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCD 360
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
V A L M P T+N+++ R + + M + PT +
Sbjct: 361 HCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVAT 420
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW 530
YT +I R+K + A F M GI P S + L + + GW
Sbjct: 421 YTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRN--RLVGW 467
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 80/188 (42%), Gaps = 1/188 (0%)
Query: 270 ACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESM 329
A L L ++G D +F+ + + D + + I G A+KV + M
Sbjct: 245 AYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRM 304
Query: 330 EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGL 389
++ ++ P+ T + ++ + K DA+ ++M +KG +I+ C
Sbjct: 305 KRYDLVPNVYTFNHIIKTLCK-NEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCE 363
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
V+RA + S M++ + YN ++ + + A ++ M + PT AT+ +
Sbjct: 364 VNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTV 423
Query: 450 LMHAYSRR 457
++H R+
Sbjct: 424 MIHGLVRK 431
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 153/356 (42%), Gaps = 6/356 (1%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
YNA I L +++ W + + M+ + I R R K+A F KM
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYAR--ARKVKEAIGAFHKM 188
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
G K ++ + V A + +M+KK + Y L++ + + ++
Sbjct: 189 EEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL 248
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
+ + EMK + +P + I+++A+ + + + EM+ KP+ + + L
Sbjct: 249 LRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSL 308
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
I+ G +KK++D A + F + K G + +Y AL+ AY S E AY + M+ +G
Sbjct: 309 INGLGSEKKLND-ALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKG 367
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
+ P+ TY +L R ++ ++++ M E T T+ I+V F + + A
Sbjct: 368 VGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAI 424
Query: 606 DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
+ E G+ P + ++ L+ A + + + EM + ++P +S +
Sbjct: 425 KIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRL 480
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 166/407 (40%), Gaps = 18/407 (4%)
Query: 249 VCCLYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNA 308
V L F+W Q+ T L LG+ + L ++ + K +
Sbjct: 109 VLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLL-------S 161
Query: 309 AISGLLCCGRYEDAWKVYES------MEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFF 362
+ L RY A KV E+ ME+ + + + M+ + K R+ DA F
Sbjct: 162 KETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSK-SRNVGDAQKVF 220
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKS 422
+KM +K + + +++ + E + R + EM+ +G + + Y +++A CK+
Sbjct: 221 DKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKA 280
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY 482
EEA F EM+ +N KP+ F L++ + + G A +Y
Sbjct: 281 KKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTY 340
Query: 483 TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ 542
L+ AY ++M D A +M+ G+ P + +Y ++H ++AY ++ M
Sbjct: 341 NALVGAYCWSQRMED-AYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS 399
Query: 543 REGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYM 602
E P++ TY ++ F +KIW M + V F+ L+ + +
Sbjct: 400 CE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLD 456
Query: 603 EARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAAL 649
EA + +E +G+ P ++ L G+ K+ L+ +M L
Sbjct: 457 EACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRL 503
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 126/262 (48%), Gaps = 9/262 (3%)
Query: 324 KVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKS 383
+V M+ + PD V I++ K + ++A FF +M ++ K S + +++
Sbjct: 253 EVNREMKDEGFEPDVVAYGIIINAHCK-AKKYEEAIRFFNEMEQRNCKPSPHIFCSLING 311
Query: 384 FCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPT 443
+E ++ AL + G A YN L+ A+C S +E+A EM+ K V P
Sbjct: 312 LGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPN 371
Query: 444 AATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAF 503
A T++I++H R + K + Q + +PT ++Y ++ + ++++ DMA +
Sbjct: 372 ARTYDIILHHLIRMQRSKEAYEVY---QTMSCEPTVSTYEIMVRMFCNKERL-DMAIKIW 427
Query: 504 LKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYT----TLLDG 559
+MK G+ P H +++LI A ++A F M GI+P ++ TLLD
Sbjct: 428 DEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDE 487
Query: 560 FRRAGDTQTMMKIWKLMMSEKV 581
R+ T ++K+ +L ++ V
Sbjct: 488 GRKDKVTDLVVKMDRLRKTQLV 509
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/279 (18%), Positives = 116/279 (41%), Gaps = 31/279 (11%)
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGL---------------KPTANSYTC 484
K T + L++ S ++ P ++E +L ++ + G+ K T ++Y
Sbjct: 74 TKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNA 133
Query: 485 LISAYGRQKK-------MSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
LI + G+ K+ + DM A L + ++ + Y+ + ++A A
Sbjct: 134 LIESLGKIKQFKLIWSLVDDMKAKKLL---------SKETFALISRRYARARKVKEAIGA 184
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAK 597
F M+ G K + +LD ++ + K++ M ++ E ++ IL++G+ +
Sbjct: 185 FHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQ 244
Query: 598 QGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
+ + +V E G P V+ Y +++NA+ + ++ + + EM N KP
Sbjct: 245 ELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHI 304
Query: 658 YSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+ ++I + ++ SG ++ +Y L
Sbjct: 305 FCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNAL 343
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 153/324 (47%), Gaps = 12/324 (3%)
Query: 291 FRNLPSSKKFR-DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
F+ S++FR ++ +Y+ + L+ R ++ E +K + ++++
Sbjct: 61 FKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYG 120
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEM--EKKGVFS 407
K G ++A FE+M + K S A++ ++ +S+ + E+ E G S
Sbjct: 121 KAG-MFENAQKVFEEMPNRDCKRSVLSFNALLSAY----RLSKKFDVVEELFNELPGKLS 175
Query: 408 ---NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
+ + YNTL+ A C+ + + EA L E++ K +KP TFN L+ + + Q ++ E
Sbjct: 176 IKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGE 235
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
+ A+M + + +Y + + K ++ + F ++K G+KP S+ A+I
Sbjct: 236 EIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELV-NLFGELKASGLKPDVFSFNAMIRG 294
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
G ++A ++ + + G +P T+ LL +AGD ++ ++++K S++
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVG 354
Query: 585 KVTFNILVDGFAKQGQYMEARDVI 608
+ T LVD K + EA +++
Sbjct: 355 QTTLQQLVDELVKGSKREEAEEIV 378
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 2/200 (1%)
Query: 464 ENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM-KKVGIKPTSHSYTALI 522
+ + EM + K + S+ L+SAY KK D+ + F ++ K+ IKP SY LI
Sbjct: 129 QKVFEEMPNRDCKRSVLSFNALLSAYRLSKKF-DVVEELFNELPGKLSIKPDIVSYNTLI 187
Query: 523 HAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVE 582
A +A + ++ +G+KP I T+ TLL G + +IW M+ + V
Sbjct: 188 KALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVA 247
Query: 583 GTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQL 642
T+N + G A + + E ++ E GL P V ++N ++ G+ +
Sbjct: 248 IDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAW 307
Query: 643 LKEMAALNLKPDSVTYSTMI 662
KE+ +PD T++ ++
Sbjct: 308 YKEIVKHGYRPDKATFALLL 327
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 2/232 (0%)
Query: 415 LMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM-QDI 473
++ + K+ E A+ +F EM ++ K + +FN L+ AY + +VE L E+ +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 474 GLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEK 533
+KP SY LI A + + + A +++ G+KP ++ L+ + + G E
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVA-LLDEIENKGLKPDIVTFNTLLLSSYLKGQFEL 233
Query: 534 AYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVD 593
+ M + + I TY L G ++ ++ ++ + + ++ +FN ++
Sbjct: 234 GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIR 293
Query: 594 GFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 645
G +G+ EA E K G P T+ +L+ A + G +L KE
Sbjct: 294 GSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKE 345
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 125/250 (50%), Gaps = 3/250 (1%)
Query: 415 LMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIG 474
L+ CK+N +++A + M + + P A+ + L++ +R L+ +M+D G
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 171
Query: 475 LKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKA 534
+Y L+ + + + ++ + G+ P + +Y+ L+ A ++A
Sbjct: 172 YPSNTVTYNALVRGLCMLGSL-NQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEA 230
Query: 535 YVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDG 594
+ + +G +P++ +Y LL GF + G T M +++ + ++ + V++NIL+
Sbjct: 231 VKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRC 290
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN--LK 652
G++ EA +++E P+V+TYN+L+N+ A G+ + Q+LKEM+ N +
Sbjct: 291 LCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFR 350
Query: 653 PDSVTYSTMI 662
+ +Y+ +I
Sbjct: 351 VTATSYNPVI 360
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 151/370 (40%), Gaps = 5/370 (1%)
Query: 296 SSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSA 355
SS D Y ++ L G A ++ E ME + VT + +V + LG S
Sbjct: 134 SSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLG-SL 192
Query: 356 KDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
+ F E++ +KG+ + ++++ E A+ + E+ KG N + YN L
Sbjct: 193 NQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVL 252
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGL 475
+ FCK ++A LF E+ AK K ++NIL+ + + +LLAEM
Sbjct: 253 LTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDR 312
Query: 476 KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVG--IKPTSHSYTALIHAYSVSGWHEK 533
P+ +Y LI++ + ++ A +M K + T+ SY +I G +
Sbjct: 313 APSVVTYNILINSLAFHGR-TEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDL 371
Query: 534 AYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVD 593
+ M KP+ TY + Q I + + +++ T + ++
Sbjct: 372 VVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVIT 431
Query: 594 GFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM-AALNLK 652
++G A ++ E + G P TY+ L+ G + ++L M + N K
Sbjct: 432 SLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCK 491
Query: 653 PDSVTYSTMI 662
P ++ MI
Sbjct: 492 PTVDNFNAMI 501
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
Query: 441 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA 500
KP A L++ + + K ++ M G+ P A++YT L++ ++ + A
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVG-YAM 161
Query: 501 DAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
KM+ G + +Y AL+ + G ++ E + ++G+ P+ TY+ LL+
Sbjct: 162 QLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAA 221
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTV 620
+ T +K+ ++ + E V++N+L+ GF K+G+ +A + E G V
Sbjct: 222 YKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANV 281
Query: 621 MTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
++YN+L+ G+ + LL EM + P VTY+ +I
Sbjct: 282 VSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILI 323
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 140/338 (41%), Gaps = 8/338 (2%)
Query: 258 MRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCG 317
++ EP+LV+ VL + G D M LFR LP+ +V YN + L C G
Sbjct: 239 VKGGEPNLVSY---NVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDG 295
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKW--SEE 375
R+E+A + M+ + P VT +I++ + GR+ + A ++M++ ++ +
Sbjct: 296 RWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQ-ALQVLKEMSKGNHQFRVTAT 354
Query: 376 VLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH-VEEAEGLFVE 434
++ C EG V + EM + N YN + + C+ N V+EA +
Sbjct: 355 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI-GSLCEHNSKVQEAFYIIQS 413
Query: 435 MKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKK 494
+ K T + ++ + R+ LL EM G P A++Y+ LI +
Sbjct: 414 LSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGM 473
Query: 495 MSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYT 554
+ + + KPT ++ A+I + A FE M + P+ TY
Sbjct: 474 FTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYA 533
Query: 555 TLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILV 592
L++G + + ++ + KV G I++
Sbjct: 534 ILVEGIAHEDELELAKEVLDELRLRKVIGQNAVDRIVM 571
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 131/312 (41%), Gaps = 13/312 (4%)
Query: 357 DAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLM 416
D++ E + G K + ++ C + +A+ + M G+ +A Y L+
Sbjct: 89 DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLV 148
Query: 417 DAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAY----SRRMQPKIVENLLAEMQD 472
+ CK +V A L +M+ T+N L+ S + VE L+ +
Sbjct: 149 NQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK--- 205
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHE 532
GL P A +Y+ L+ A +++ +D A ++ G +P SY L+ + G +
Sbjct: 206 -GLAPNAFTYSFLLEAAYKERG-TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTD 263
Query: 533 KAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILV 592
A F + +G K ++ +Y LL G + + M + VT+NIL+
Sbjct: 264 DAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILI 323
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHP---TVMTYNMLMNAYARGGQHSKLPQLLKEMAAL 649
+ A G+ +A V+ E K G H T +YN ++ + G+ + + L EM
Sbjct: 324 NSLAFHGRTEQALQVLKEMSK-GNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYR 382
Query: 650 NLKPDSVTYSTM 661
KP+ TY+ +
Sbjct: 383 RCKPNEGTYNAI 394
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 3/166 (1%)
Query: 500 ADAFLKMKKV---GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
+D+F ++ + G KP T L++ + +KA E M GI P YT L
Sbjct: 88 SDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYL 147
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
++ + G+ M++ + M VT+N LV G G ++ + + GL
Sbjct: 148 VNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL 207
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
P TY+ L+ A + + +LL E+ +P+ V+Y+ ++
Sbjct: 208 APNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLL 253
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 138/323 (42%), Gaps = 55/323 (17%)
Query: 261 QEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYE 320
P + T + L GRA M D M +F + R V +NA ++ L +E
Sbjct: 95 NNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFE 154
Query: 321 DAWKVYESMEK--DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLG 378
++++ + +NI PD ++ G
Sbjct: 155 RVPQLFDEFPQRYNNITPDKIS------------------------------------YG 178
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
++KS+C G +A+ I +ME KGV I + T++ + K+ V+EAE L++EM K
Sbjct: 179 MLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNK 238
Query: 439 NVKPTAATFNI-LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
+N+ LM+A + P+ V+ L+ EM +GLKP SY L++AY + MS+
Sbjct: 239 GCDLDNTVYNVRLMNA--AKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSE 296
Query: 498 MAADAFLKMKKV--GI-KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYT 554
KKV G+ +P + ++ LI ++G +++ F+ P +T
Sbjct: 297 --------AKKVYEGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCK 348
Query: 555 TLLDGF---RRAGDTQTMMKIWK 574
L +G R D + + +I K
Sbjct: 349 HLTEGLVKNNRMEDARGVARIVK 371
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 114/255 (44%), Gaps = 24/255 (9%)
Query: 419 FCKSNHVEEAEGLFVEMKAKNVKPTAATF-NILMHAYSRRMQPKIVENLLAEMQDIGLKP 477
KS + E L +E N K TF + L+ +Y R + EM +G
Sbjct: 77 LAKSQRFSDIEAL-IESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPR 135
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKV---------GIKPTSHSYTALIHAYSVS 528
T S+ L++A + +D F ++ ++ I P SY LI +Y S
Sbjct: 136 TVVSFNALLAAC--------LHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDS 187
Query: 529 GWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTF 588
G EKA +M+ +G++ +I +TT+L + G +W M+++ + +
Sbjct: 188 GKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVY 247
Query: 589 NILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA 648
N+ + AK+ ++++ E +GL P ++YN LM AY G S+ ++ + +
Sbjct: 248 NVRLMNAAKESPE-RVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLE- 305
Query: 649 LNLKPDSVTYSTMIY 663
+P++ T+ T+I+
Sbjct: 306 ---QPNAATFRTLIF 317
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 136/296 (45%), Gaps = 19/296 (6%)
Query: 344 MVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKK 403
++ + KLG+S K A+ F K G + + +++ C + A + +M K
Sbjct: 237 LIALFGKLGKS-KAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKS 295
Query: 404 GVFSNAIVYNTLMDAFCKSNHVEEAEGLF--VEMKAKNVKP-------TAATFNILMHAY 454
GV S ++ FCK EEA ++ + K K++ P TA N +
Sbjct: 296 GVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITF 355
Query: 455 SRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPT 514
++ M + +L E + G+KP ++ +I + R + + D A L M G P
Sbjct: 356 AQEM----LGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKA-LLLDMISKGPAPG 406
Query: 515 SHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK 574
+ + ++HA S +G ++A + M+ G+KP + TYT ++ G+ + G +I
Sbjct: 407 NAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILA 466
Query: 575 LMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAY 630
+ + + VT++ L+ G+ K +Y EA +++E + G+ P YN L+ ++
Sbjct: 467 EAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSF 522
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 139/367 (37%), Gaps = 52/367 (14%)
Query: 377 LGAIVKSFCAEGLVSRALI--IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVE 434
L +V+ F + G+ + LI ++ + + + + +L+ A +A GL+
Sbjct: 157 LDFVVRVFESPGISGKNLIRFLKWATQNEEITVTTSLVESLLVAIASDTRRMDAYGLWDL 216
Query: 435 MKAKNVKPTAATFNI-----LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY 489
+K K + N+ L+ + + + K ++ ++ ++ G P A +Y + A
Sbjct: 217 VKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEAL 276
Query: 490 GRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE---------- 539
++ M D A KM K G+ +I + G E+AY +E
Sbjct: 277 CKRSFM-DWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLP 335
Query: 540 ------------------------------NMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
+R GIKP ++ ++ R + +
Sbjct: 336 PRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDA 391
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
+ M+S+ FN++V +K G EA++V+ GL P V TY ++++
Sbjct: 392 KALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISG 451
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMD 689
YA+GG + ++L E + K VTY +I +M + G +
Sbjct: 452 YAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPN 511
Query: 690 VDSYQKL 696
D Y KL
Sbjct: 512 ADEYNKL 518
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 4/168 (2%)
Query: 305 IYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEK 364
++N + G ++A +V + ME ++PD T +++++ K G +A +
Sbjct: 409 VFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAK-GGMMDEAQEILAE 467
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC-KSN 423
+K K S A+++ +C AL + +EM++ GV NA YN L+ +FC K+
Sbjct: 468 AKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKAL 527
Query: 424 HVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE--NLLAE 469
E+AE LF EMK K + A + ++ + K+ E NLLAE
Sbjct: 528 DWEKAEVLFEEMKQKGLHLNAISQGLIRAVKEMESEAKVTEDGNLLAE 575
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Query: 404 GVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIV 463
G+ + YN ++ FC+S + + EM+ K +KP +++F +++ + + V
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 464 ENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLK-MKKVGIKPTSHSYTALI 522
+LA M+D G+ ++Y I + ++KK + A A L M G+KP + +Y+ LI
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKE--AKALLDGMLSAGMKPNTVTYSHLI 299
Query: 523 HAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVE 582
H + E+A F+ M G KP E Y TL+ + GD +T + + K M +
Sbjct: 300 HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 359
Query: 583 GTKVTFNILVDGFAKQGQYMEARDVISE 610
+ LV+G AK + EA+++I +
Sbjct: 360 PSFSIMKSLVNGLAKDSKVEEAKELIGQ 387
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 124/302 (41%), Gaps = 40/302 (13%)
Query: 263 PSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDA 322
P L + R L +A M D + +FR+L + R V NA + L Y++A
Sbjct: 111 PDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEA 170
Query: 323 WKVYESMEK-DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIV 381
+VY M K I PD E NR ++
Sbjct: 171 KRVYIEMPKMYGIEPD------------------------LETYNR------------MI 194
Query: 382 KSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK 441
K FC G S + I +EME+KG+ N+ + ++ F + +E + MK + V
Sbjct: 195 KVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVN 254
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
+T+NI + + +R + K + LL M G+KP +Y+ LI + + + A
Sbjct: 255 IGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEE-AKK 313
Query: 502 AFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY-VAFENMQREGIKPSIETYTTLLDGF 560
F M G KP S Y LI+ G E A + E+M++ + PS +L++G
Sbjct: 314 LFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV-PSFSIMKSLVNGL 372
Query: 561 RR 562
+
Sbjct: 373 AK 374
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 125/282 (44%), Gaps = 3/282 (1%)
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
NR +K SE + + ++ +L + ++EK + N L+ A +
Sbjct: 109 NRPDLK-SERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDY 167
Query: 426 EEAEGLFVEM-KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
+EA+ +++EM K ++P T+N ++ + +++AEM+ G+KP ++S+
Sbjct: 168 KEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGL 227
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE 544
+IS + + K SD MK G+ +Y I + ++A + M
Sbjct: 228 MISGFYAEDK-SDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSA 286
Query: 545 GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA 604
G+KP+ TY+ L+ GF D + K++K+M++ + + L+ K G + A
Sbjct: 287 GMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETA 346
Query: 605 RDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
+ E + P+ L+N A+ + + +L+ ++
Sbjct: 347 LSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQV 388
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKV-GIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
+ CL++ ++ K +++M K+ GI+P +Y +I + SG +Y
Sbjct: 159 FACLVAKDYKEAKR------VYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAE 212
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
M+R+GIKP+ ++ ++ GF + + K+ +M V T+NI + K+ +
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
EA+ ++ G+ P +TY+ L++ + + +L K M KPDS Y T
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFT 332
Query: 661 MIY 663
+IY
Sbjct: 333 LIY 335
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 1/203 (0%)
Query: 492 QKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVS-GWHEKAYVAFENMQREGIKPSI 550
Q M D + F ++K I T S AL+ A V+ + E V E + GI+P +
Sbjct: 128 QANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDL 187
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE 610
ETY ++ F +G + I M + ++ +F +++ GF + + E V++
Sbjct: 188 ETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAM 247
Query: 611 FGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXX 670
G++ V TYN+ + + + + + LL M + +KP++VTYS +I+
Sbjct: 248 MKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDD 307
Query: 671 XXXXXXYHKQMIKSGQVMDVDSY 693
K M+ G D + Y
Sbjct: 308 FEEAKKLFKIMVNRGCKPDSECY 330
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 97/236 (41%), Gaps = 2/236 (0%)
Query: 419 FCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDI-GLKP 477
+ ++N ++ + +F +++ + T + N L+ A K + + EM + G++P
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
+Y +I + + + + +M++ GIKP S S+ +I + ++
Sbjct: 186 DLETYNRMIKVFC-ESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKV 244
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAK 597
M+ G+ + TY + + ++ + M+S ++ VT++ L+ GF
Sbjct: 245 LAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCN 304
Query: 598 QGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKP 653
+ + EA+ + G P Y L+ +GG L KE N P
Sbjct: 305 EDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 146/370 (39%), Gaps = 36/370 (9%)
Query: 325 VYESMEKDNIRPD--HVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVK 382
+Y+S+ + IR D H S + +M K + K + + L ++
Sbjct: 388 LYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVIN 447
Query: 383 SFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKP 442
V A+ + ++ + G+ ++YN +++ CK EE+ L EMK V+P
Sbjct: 448 CLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEP 507
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLIS-------AYGRQKKM 495
+ T N + + R +LL +M+ G +P T L+ A K +
Sbjct: 508 SQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYL 567
Query: 496 SDMAADAFLK------------MKKVGIK---------------PTSHSYTALIHAYSVS 528
D+A + FL +K G+ P +Y LI A +
Sbjct: 568 DDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKA 627
Query: 529 GWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTF 588
+A + F M +G+KP++ TY +++DG+ + G+ + M ++ +T+
Sbjct: 628 CRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITY 687
Query: 589 NILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA 648
L+ G G+ EA +E +P +T+ L+ + G + +EM
Sbjct: 688 TSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEE 747
Query: 649 LNLKPDSVTY 658
++PDS Y
Sbjct: 748 KEMEPDSAVY 757
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/398 (18%), Positives = 157/398 (39%), Gaps = 23/398 (5%)
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEV 376
G+ E A V+ + +H++ +I+V K G+ K A+ E + + ++ + +
Sbjct: 228 GKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDK-AFELIEMLEERDIRLNYKT 285
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
++ F E + +A + +M + G+ ++ +Y+ L+ CK +E A L++E+K
Sbjct: 286 YCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIK 345
Query: 437 AKNVKPTAATFNILMHAYSRRMQ-PKIVENLLAEMQDIGLKPTANSYTCLISAYGR---- 491
+ P L+ ++S + +I E ++ DI K Y L + R
Sbjct: 346 RSGIPPDRGILGKLLCSFSEESELSRITEVIIG---DIDKKSVMLLYKSLFEGFIRNDLV 402
Query: 492 -------QKKMSDMAADA------FLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF 538
Q M + +D LK I P S S + +I+ + + A
Sbjct: 403 HEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLL 462
Query: 539 ENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQ 598
++ + G+ P Y +++G + G ++ +K+ M VE ++ T N + A++
Sbjct: 463 HDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAER 522
Query: 599 GQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
++ A D++ + G P + L+ G+ + L ++A V
Sbjct: 523 CDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVAS 582
Query: 659 STMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
+ I + + +G DV +Y L
Sbjct: 583 TAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVL 620
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 131/312 (41%), Gaps = 4/312 (1%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
+++ L +A D + L ++ + +YN I G+ GR E++ K+ M+
Sbjct: 443 SIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKD 502
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVK-WSEEVLGAIVKSFCAEGLV 390
+ P T + + + + A +KM G + W + +VK C G
Sbjct: 503 AGVEPSQFTLNCIYGCLAERCDFVG-ALDLLKKMRFYGFEPWIKHTT-FLVKKLCENGRA 560
Query: 391 SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
A ++ +G + + +D K+ V+ LF ++ A P +++L
Sbjct: 561 VDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVL 620
Query: 451 MHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVG 510
+ A + + + L EM GLKPT +Y +I + ++ ++ D ++M +
Sbjct: 621 IKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEI-DRGLSCIVRMYEDE 679
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
P +YT+LIH SG +A + M+ + P+ T+ L+ G + G + +
Sbjct: 680 KNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEAL 739
Query: 571 KIWKLMMSEKVE 582
++ M +++E
Sbjct: 740 VYFREMEEKEME 751
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 125/306 (40%), Gaps = 8/306 (2%)
Query: 330 EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGL 389
+++ R D + M +++ + ++A + +N + S G ++ GL
Sbjct: 98 KQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCF-MSPGAFGFFIRCLGNAGL 156
Query: 390 VSRALIIQSEMEKKGV-FSNAIVYNTLMDAFCKSN--HVEEAEGLFVEMKAKNVKPTAAT 446
V A + + + G+ NA YN L++A KSN VE E EM+ T
Sbjct: 157 VDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFT 216
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
++ Y + + ++ E+ G S T L+ ++ + ++ D A + +
Sbjct: 217 LTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQV-DKAFELIEML 274
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
++ I+ +Y LIH + +KA+ FE M+R G+ I Y L+ G + D
Sbjct: 275 EERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDL 334
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
+ + ++ + + + L+ F+++ + +VI G I ++ Y L
Sbjct: 335 EMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVI--IGDIDKKSVMLLYKSL 392
Query: 627 MNAYAR 632
+ R
Sbjct: 393 FEGFIR 398
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 122/302 (40%), Gaps = 4/302 (1%)
Query: 359 WYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKK-GVFSNAIVYNTLMD 417
W ++M + S E L I++ + G V +A+ + + + K G VYN+L+
Sbjct: 131 WKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLH 190
Query: 418 AFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKP 477
A C A L M K +KP T+ IL++ + + K + L EM G P
Sbjct: 191 ALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNP 250
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
A LI + + A + KM K G P ++ LI A S SG E
Sbjct: 251 PARGRDLLIEGLLNAGYL-ESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEM 309
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAK 597
+ + G+ I+TY TL+ + G ++ + + + + ++ G +
Sbjct: 310 YYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCR 369
Query: 598 QGQYMEARDVISEFGKIGLHP-TVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSV 656
G + +A S+ K+ HP Y ML+ RGG+ L EM + L P S
Sbjct: 370 NGMFDDAFSFFSDM-KVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISR 428
Query: 657 TY 658
+
Sbjct: 429 CF 430
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/319 (19%), Positives = 136/319 (42%), Gaps = 1/319 (0%)
Query: 318 RYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL 377
+YE WK+ + M+ ++ T ++ K G + F G + + +V
Sbjct: 126 KYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVY 185
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
+++ + C + A + M +KG+ + Y L++ +C + ++EA+ EM
Sbjct: 186 NSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR 245
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
+ P A ++L+ + + ++++M G P ++ LI A + ++ +
Sbjct: 246 RGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEV-E 304
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
+ + K+G+ +Y LI A S G ++A+ N +G KP Y ++
Sbjct: 305 FCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPII 364
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
G R G + M + + + +L+ + G++++A + + E ++GL
Sbjct: 365 KGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLV 424
Query: 618 PTVMTYNMLMNAYARGGQH 636
P ++M+ + GG+H
Sbjct: 425 PISRCFDMVTDGLKNGGKH 443
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 2/222 (0%)
Query: 442 PTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAAD 501
PT+ + L + + + + + +L +M+D+ L + + +I YG+ + D A +
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHV-DQAVE 167
Query: 502 AFLKM-KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
F + K +G + T Y +L+HA AY M R+G+KP TY L++G+
Sbjct: 168 LFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGW 227
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTV 620
AG + + M ++L++G G A++++S+ K G P +
Sbjct: 228 CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDI 287
Query: 621 MTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
T+N+L+ A ++ G+ ++ L L D TY T+I
Sbjct: 288 QTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLI 329
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 120/298 (40%), Gaps = 3/298 (1%)
Query: 279 GRAGMGDKLMVLFRNLPSSKKFRD-VHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPD 337
G+ G D+ + LF +P + + V +YN+ + L + A+ + M + ++PD
Sbjct: 157 GKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPD 216
Query: 338 HVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQ 397
T +I+V G+ K+A F ++M+R+G +++ G + A +
Sbjct: 217 KRTYAILVNGWCSAGK-MKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMV 275
Query: 398 SEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRR 457
S+M K G + +N L++A KS VE ++ + T+ L+ A S+
Sbjct: 276 SKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKI 335
Query: 458 MQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHS 517
+ LL + G KP + Y +I R M D A F MK P
Sbjct: 336 GKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNG-MFDDAFSFFSDMKVKAHPPNRPV 394
Query: 518 YTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKL 575
YT LI G A M G+ P + + DG + G M+I +L
Sbjct: 395 YTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQL 452
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 10/256 (3%)
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQ-PKIVENLLAEM 470
Y L + E + +MK ++ + T ++ Y + + VE
Sbjct: 114 YEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVP 173
Query: 471 QDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW 530
+ +G + T + Y L+ A KM A +M + G+KP +Y L++ + +G
Sbjct: 174 KTLGCQQTVDVYNSLLHALC-DVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGK 232
Query: 531 HEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKV---- 586
++A + M R G P L++G AG ++ K M+S+ +G V
Sbjct: 233 MKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA----KEMVSKMTKGGFVPDIQ 288
Query: 587 TFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
TFNIL++ +K G+ ++ K+GL + TY L+ A ++ G+ + +LL
Sbjct: 289 TFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC 348
Query: 647 AALNLKPDSVTYSTMI 662
KP Y+ +I
Sbjct: 349 VEDGHKPFPSLYAPII 364
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 1/268 (0%)
Query: 388 GLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATF 447
G + +A + GV N YN LM AFC ++ + A LF +M ++V P ++
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 448 NILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMK 507
IL+ + R+ Q LL +M + G P SYT L+++ R+ ++ + A +MK
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLRE-AYKLLCRMK 287
Query: 508 KVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQ 567
G P Y +I + A ++M G P+ +Y TL+ G G
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD 347
Query: 568 TMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLM 627
K + M+S+ N LV GF G+ EA DV+ K G T+ M++
Sbjct: 348 EGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 407
Query: 628 NAYARGGQHSKLPQLLKEMAALNLKPDS 655
+ K+ L++ + D+
Sbjct: 408 PLICNEDESEKIKLFLEDAVKEEITGDT 435
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 103/243 (42%)
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADA 502
T F L+ Y+ P+ V + +M + P ++ + A +
Sbjct: 118 TGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL 177
Query: 503 FLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR 562
F + G+ P + SY L+ A+ ++ AY F M + P +++Y L+ GF R
Sbjct: 178 FKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCR 237
Query: 563 AGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMT 622
G M++ M+++ ++++ L++ ++ Q EA ++ G +P ++
Sbjct: 238 KGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVH 297
Query: 623 YNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMI 682
YN ++ + R + ++L +M + P+SV+Y T+I Y ++MI
Sbjct: 298 YNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMI 357
Query: 683 KSG 685
G
Sbjct: 358 SKG 360
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 8/247 (3%)
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN-ILMHAYSRRMQPKIVENLLAE 469
++ L+ + ++ E+ F +M N P N IL S R + L
Sbjct: 121 IFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 470 MQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG 529
+ G+ P SY L+ A+ +S +A F KM + + P SY LI + G
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLS-IAYQLFGKMLERDVVPDVDSYKILIQGFCRKG 239
Query: 530 WHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK---V 586
A ++M +G P +YTTLL+ R TQ + + +KL+ K++G V
Sbjct: 240 QVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRK--TQ-LREAYKLLCRMKLKGCNPDLV 296
Query: 587 TFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
+N ++ GF ++ + M+AR V+ + G P ++Y L+ G + + L+EM
Sbjct: 297 HYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEM 356
Query: 647 AALNLKP 653
+ P
Sbjct: 357 ISKGFSP 363
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 2/229 (0%)
Query: 317 GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEV 376
G + A+++++S + P+ + ++++ L A+ F KM + V +
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAF-CLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 377 LGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
+++ FC +G V+ A+ + +M KG + + Y TL+++ C+ + EA L MK
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 437 AKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMS 496
K P +N ++ + R + +L +M G P + SY LI Q M
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQ-GMF 346
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
D +M G P L+ + G E+A E + + G
Sbjct: 347 DEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 140/311 (45%), Gaps = 7/311 (2%)
Query: 301 RDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSA--KDA 358
+++ +Y + L ++E W V E +E+ N P+ + ++ GR ++A
Sbjct: 69 KNIAVYERTVRRLAAAKKFE--W-VEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENA 125
Query: 359 WYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKK-GVFSNAIVYNTLMD 417
F++M + K + A++ + I E+ K + + YNTL+
Sbjct: 126 QKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIK 185
Query: 418 AFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKP 477
C EA L E++ K +KP TFNIL+H + + + E + A M + +K
Sbjct: 186 GLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKR 245
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
SY + + K +M + F K+K +KP ++TA+I + G ++A
Sbjct: 246 DIRSYNARLLGLAMENKSEEMVS-LFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITW 304
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAK 597
++ +++ G +P + +LL +AGD ++ ++ K + ++++ + +VD K
Sbjct: 305 YKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVK 364
Query: 598 QGQYMEARDVI 608
+ EA +++
Sbjct: 365 GSKQDEAEEIV 375
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 26/298 (8%)
Query: 368 KGVKWSEEVLGAIVK--SFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
K +W EE+L K + EG V+R + + + G+F NA
Sbjct: 85 KKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRV---GMFENA---------------- 125
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM-QDIGLKPTANSYTC 484
+ +F EM +N K TA +FN L++A + +VE + E+ + ++P SY
Sbjct: 126 ---QKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNT 182
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE 544
LI + ++ A +++ G+KP ++ L+H G E+ + M +
Sbjct: 183 LIKGLCGKGSFTEAVA-LIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEK 241
Query: 545 GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA 604
+K I +Y L G ++ M+ ++ + +++ TF ++ GF +G+ EA
Sbjct: 242 NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEA 301
Query: 605 RDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
E K G P +N L+ A + G +L KE+ A L D ++
Sbjct: 302 ITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVV 359
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 92/202 (45%), Gaps = 2/202 (0%)
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM-QR 543
+I+ YGR M + A F +M + K T+ S+ AL++A S + F+ + +
Sbjct: 112 IINLYGRVG-MFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGK 170
Query: 544 EGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYME 603
I+P + +Y TL+ G G + + + ++ ++ +TFNIL+ +G++ E
Sbjct: 171 LSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEE 230
Query: 604 ARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
+ + + + + +YN + A + ++ L ++ LKPD T++ MI
Sbjct: 231 GEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIK 290
Query: 664 XXXXXXXXXXXXXYHKQMIKSG 685
++K++ K+G
Sbjct: 291 GFVSEGKLDEAITWYKEIEKNG 312
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 121/280 (43%), Gaps = 6/280 (2%)
Query: 290 LFRNLPSSKKFR-DVHIYNAAISGLLCCGRYEDAWKVYESMEKD--NIRPDHVTCSIMVT 346
LF ++ ++ + D+ +N+ + D K+++ + K N RP T I+++
Sbjct: 71 LFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLS 130
Query: 347 -VMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGV 405
R S + M G++ + V+S C G V A + E+ +K
Sbjct: 131 HACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS 190
Query: 406 FSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK-NVKPTAATFNILMHAYSRRMQPKIVE 464
+ YN L+ CK + EM+ +VKP +F IL+ +
Sbjct: 191 PPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
L++++ + G KP Y ++ + K S+ A + KMK+ G++P +Y LI
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE-AVGVYKKMKEEGVEPDQITYNTLIFG 309
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAG 564
S +G E+A + + M G +P TYT+L++G R G
Sbjct: 310 LSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 2/201 (0%)
Query: 400 MEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQ 459
M G+ + + + + + C++ V+EA+ L E+ K+ P T+N L+ +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 460 PKIVENLLAEMQ-DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSY 518
+V + EM+ D +KP S+T LI K + + A K+ G KP Y
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLRE-AMYLVSKLGNAGFKPDCFLY 268
Query: 519 TALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMS 578
++ + +A ++ M+ EG++P TY TL+ G +AG + K M+
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 579 EKVEGTKVTFNILVDGFAKQG 599
E T+ L++G ++G
Sbjct: 329 AGYEPDTATYTSLMNGMCRKG 349
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 115/284 (40%), Gaps = 11/284 (3%)
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATF-NILMHAYSRRMQPKIVENLLAEMQDI-----G 474
KS ++ +A+ LF + A + P F N ++ +Y +V + + Q I
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYG---SIAVVNDTVKLFQHILKSQPN 117
Query: 475 LKPTANSYTCLISAYGRQKKMSDMAADAFLK-MKKVGIKPTSHSYTALIHAYSVSGWHEK 533
+P +++ L+S R S L M G++P + + + +G ++
Sbjct: 118 FRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 534 AYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE-KVEGTKVTFNILV 592
A + + + P TY LL + D + + M + V+ V+F IL+
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLK 652
D EA ++S+ G G P YN +M + + S+ + K+M ++
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 653 PDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
PD +TY+T+I+ Y K M+ +G D +Y L
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 114/257 (44%), Gaps = 8/257 (3%)
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEM--KAKNVKPTAATFNILMHAYSRRMQPKI--VENLL 467
+N+++ ++ V + LF + N +P +TF IL+ R I V +L
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147
Query: 468 AEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALI-HAYS 526
M + GL+P + + + ++ D A D ++ + P +++Y L+ H
Sbjct: 148 NLMVNNGLEPDQVTTDIAVRSLCETGRV-DEAKDLMKELTEKHSPPDTYTYNFLLKHLCK 206
Query: 527 VSGWHEKAYVAFENMQRE-GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK 585
H Y + M+ + +KP + ++T L+D + + + M + + + +
Sbjct: 207 CKDLHV-VYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 586 VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 645
+N ++ GF + EA V + + G+ P +TYN L+ ++ G+ + LK
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 646 MAALNLKPDSVTYSTMI 662
M +PD+ TY++++
Sbjct: 326 MVDAGYEPDTATYTSLM 342
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 2/219 (0%)
Query: 359 WYFFEKMNRK-GVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMD 417
W F K G+ +KSFC G++ A + EMEK G+ + + Y TL+
Sbjct: 161 WEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLIS 220
Query: 418 AFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKP 477
A K GL+ M K KP TFN+ + R + +LL M + ++P
Sbjct: 221 ALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEP 280
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
+ +Y +I + + DMA + M G KP Y +IH +G + AY
Sbjct: 281 DSITYNMVIKGFF-LARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTM 339
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM 576
++ R+ P+++T LL G + G I +L+
Sbjct: 340 CKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELV 378
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%)
Query: 508 KVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQ 567
K GI + S+ I ++ G + AY+A M++ G+ P + TYTTL+ +
Sbjct: 170 KYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCV 229
Query: 568 TMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLM 627
+W LM+ + + TFN+ + + + +A D++ K+ + P +TYNM++
Sbjct: 230 IGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVI 289
Query: 628 NAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
+ ++ M KP+ Y TMI+
Sbjct: 290 KGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIH 325
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 147/321 (45%), Gaps = 8/321 (2%)
Query: 346 TVMRKLGRSAK--DAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKK 403
++R G S + D FE M + G K S + +K F VS+AL I + +
Sbjct: 103 VILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIK-FVGAKNVSKALEIYQSIPDE 160
Query: 404 GVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA--YSRRMQPK 461
N + N+++ K+ ++ LF +MK +KP T+N L+ + PK
Sbjct: 161 STKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPK 220
Query: 462 IVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAL 521
+E L+ E+ G++ + Y +++ + S+ A + +MK G P + Y++L
Sbjct: 221 AIE-LIGELPHNGIQMDSVMYGTVLAICASNGR-SEEAENFIQQMKVEGHSPNIYHYSSL 278
Query: 522 IHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKV 581
+++YS G ++KA M+ G+ P+ TTLL + + G ++ + S
Sbjct: 279 LNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGY 338
Query: 582 EGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQ 641
++ + +L+DG +K G+ EAR + + G+ +++++A R + + +
Sbjct: 339 AENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKE 398
Query: 642 LLKEMAALNLKPDSVTYSTMI 662
L ++ K D V +TM+
Sbjct: 399 LSRDSETTYEKCDLVMLNTML 419
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 187/459 (40%), Gaps = 17/459 (3%)
Query: 210 ARNLPENLTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQ--EPSLVT 267
A+N+ + L + +++ +++ C +L L K L C+ F M+ +P +VT
Sbjct: 144 AKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVT 203
Query: 268 PRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYE 327
T+L + K + L LP + D +Y ++ GR E+A +
Sbjct: 204 YN--TLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQ 261
Query: 328 SMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAE 387
M+ + P+ S ++ G K A +M G+ ++ ++ ++K +
Sbjct: 262 QMKVEGHSPNIYHYSSLLNSYSWKG-DYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKG 320
Query: 388 GLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATF 447
GL R+ + SE+E G N + Y LMD K+ +EEA +F +MK K V+
Sbjct: 321 GLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYAN 380
Query: 448 NILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMK 507
+I++ A R + K + L + + K ++ AY R +M + KM
Sbjct: 381 SIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMR-MMKKMD 439
Query: 508 KVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQ 567
+ + P +++ LI + H AY +M +G + E ++L+ +
Sbjct: 440 EQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQA 499
Query: 568 TMMKIWKLMMSEK----VEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTY 623
++ ++ K E + +IL+ G + Y+ V+ + K+ PT+ +
Sbjct: 500 EAFSVYNMLRYSKRTICKELHEKILHILIQGNLLKDAYI----VVKDNAKMISQPTLKKF 555
Query: 624 NMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
A+ G + + +LK + K D V + I
Sbjct: 556 G---RAFMISGNINLVNDVLKVLHGSGHKIDQVQFEIAI 591
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 93/222 (41%), Gaps = 7/222 (3%)
Query: 476 KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
K +NSY SA ++ SD + ++++ ++ + +SG +
Sbjct: 63 KRHSNSYLARKSAISEVQRSSDFLSS----LQRLATVLKVQDLNVILRDFGISGRWQDLI 118
Query: 536 VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGF 595
FE MQ+ G K S+ TY++ + F A + ++I++ + E + N ++
Sbjct: 119 QLFEWMQQHG-KISVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCL 176
Query: 596 AKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR-GGQHSKLPQLLKEMAALNLKPD 654
K G+ + + + GL P V+TYN L+ + + K +L+ E+ ++ D
Sbjct: 177 VKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMD 236
Query: 655 SVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
SV Y T++ + +QM G ++ Y L
Sbjct: 237 SVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSL 278
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 160/351 (45%), Gaps = 25/351 (7%)
Query: 324 KVYESMEKDNIRPDHVTCSIMVTVMRKLGRS--AKDAWYFFEKMNRKGV-KWSEEVLGAI 380
KVY++M+ ++ D + +I++ GR A+D + ++M G+ K I
Sbjct: 321 KVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTI 380
Query: 381 VKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV 440
+K F + AL ++ +M+ GV N +++L+ A + VE+A LF EM A
Sbjct: 381 IKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGC 440
Query: 441 KPTAATFNILMHA------YSRRMQ-------PKIVENLLAEMQDIGLKPTANSYTCLIS 487
+P + FNIL+HA Y R + + E+L A+ DI K +S ++
Sbjct: 441 EPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYAD--DIVSKGRTSSPN-ILK 497
Query: 488 AYGRQKKMSDMAADAFLKM-KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGI 546
G ++ + +++ K+ KPT+ +Y L+ A + K + + M+ G+
Sbjct: 498 NNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKELM--DEMKSLGL 555
Query: 547 KPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARD 606
P+ T++TL+D +GD + ++I + M S V + + A+ A
Sbjct: 556 SPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFS 615
Query: 607 VISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLL---KEMAALNLKPD 654
+ E + + P +TYN L+ A ++ G ++ Q L ++M KP+
Sbjct: 616 LFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPN 666
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 137/304 (45%), Gaps = 35/304 (11%)
Query: 381 VKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV 440
V C + + SR I ++ K+ + N V N+LM+ S+ + ++ M+ +V
Sbjct: 276 VCGLCGDYVKSR--YIYEDLLKENIKPNIYVINSLMNV--NSHDLGYTLKVYKNMQILDV 331
Query: 441 KPTAATFNILMHAYSRRMQPKIVENLLAE---MQDIGL-KPTANSYTCLISAYGRQKKMS 496
++NIL+ + + +++ E M+ GL K A +Y +I + KM
Sbjct: 332 TADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFA-DAKMW 390
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
A MK VG+ P +H++++LI A + +G E+A FE M G +P+ + + L
Sbjct: 391 KWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNIL 450
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFG---- 612
L A + ++L S K G+ V ++ D +G+ + +++ G
Sbjct: 451 LHACVEACQYD---RAFRLFQSWK--GSSVNESLYADDIVSKGR-TSSPNILKNNGPGSL 504
Query: 613 --------------KIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
+ PT TYN+L+ A G + + +L+ EM +L L P+ +T+
Sbjct: 505 VNRNSNSPYIQASKRFCFKPTTATYNILLKAC--GTDYYRGKELMDEMKSLGLSPNQITW 562
Query: 659 STMI 662
ST+I
Sbjct: 563 STLI 566
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 177/425 (41%), Gaps = 90/425 (21%)
Query: 301 RDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY 360
R+ +YN+ + GLL CG EDA +++ MEKD+ V+ + M+ + + G AK+A
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS-----VSWAAMIKGLAQNGL-AKEAIE 256
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
F +M +G+K + G+++ + G ++ I + + + + V + L+D +C
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYC 316
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
K + A+ +F MK KNV ++ ++ Y + + + + +MQ G+ P +
Sbjct: 317 KCKCLHYAKTVFDRMKQKNV----VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP--D 370
Query: 481 SYT-------------------------------------CLISAYGRQKKMSDMAADAF 503
YT L++ YG+ + D + F
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDD-STRLF 429
Query: 504 LKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRA 563
+M + S+TA++ AY+ G + F+ M + G+KP T T ++ RA
Sbjct: 430 NEMNV----RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRA 485
Query: 564 GDTQTMMKIWKLMMSE-KVEGTKVTFNILVDGFAKQGQYMEARDVIS------------- 609
G + + +KLM SE + + ++ ++D F++ G+ EA I+
Sbjct: 486 GLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTT 545
Query: 610 -----------EFGKIGL---------HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAAL 649
E GK HP Y +L + YA G+ + QL + M
Sbjct: 546 LLSACRNKGNLEIGKWAAESLIELDPHHPA--GYTLLSSIYASKGKWDSVAQLRRGMREK 603
Query: 650 NLKPD 654
N+K +
Sbjct: 604 NVKKE 608
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 175/395 (44%), Gaps = 32/395 (8%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
LF + S K +V + A +SG L + A +++ M + N+ V+ + M+
Sbjct: 99 LFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYA 151
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
+ GR K F E R V W+ ++VK+ G + A+ + M ++ V S
Sbjct: 152 QSGRIDKALELFDEMPERNIVSWN-----SMVKALVQRGRIDEAMNLFERMPRRDVVS-- 204
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
+ ++D K+ V+EA LF M +N+ ++N ++ Y++ + + L
Sbjct: 205 --WTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQV 258
Query: 470 MQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG 529
M + S+ +I+ + R ++M + A F +M + + S+T +I Y +
Sbjct: 259 MPERDFA----SWNTMITGFIRNREM-NKACGLFDRMPEKNVI----SWTTMITGYVENK 309
Query: 530 WHEKAYVAFENMQREG-IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTF 588
+E+A F M R+G +KP++ TY ++L +I +L+ + ++
Sbjct: 310 ENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVT 369
Query: 589 NILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA 648
+ L++ ++K G+ + AR + + ++++N ++ YA G + ++ +M
Sbjct: 370 SALLNMYSKSGELIAARKMFD--NGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRK 427
Query: 649 LNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIK 683
KP +VTY +++ + K +++
Sbjct: 428 HGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVR 462
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 112/543 (20%), Positives = 222/543 (40%), Gaps = 94/543 (17%)
Query: 190 SCQKKELPLPEGVVGEIVQLAR---------NLPEN--LTLEEALAQYGERVSEKECWEV 238
S + +P PE ++GE+ ++ + LPE +T + Y + +E E+
Sbjct: 40 SSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREAREL 99
Query: 239 LE-VLGKERLLVCCLYFFQWMRAQEPSLVT------PRACTVLFPLL----GRAGMGDKL 287
+ V ++ ++ ++R+++ S+ P V + + ++G DK
Sbjct: 100 FDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKA 159
Query: 288 MVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTV 347
+ LF +P R++ +N+ + L+ GR ++A ++E M R D V+ + MV
Sbjct: 160 LELFDEMPE----RNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDG 211
Query: 348 MRKLGRSAKDAWYFFEKM-NRKGVKWSEEVLGAIV----------------KSFCAEGLV 390
+ K G+ +A F+ M R + W+ + G + F + +
Sbjct: 212 LAKNGK-VDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTM 270
Query: 391 SRALIIQSEMEKK-GVFS-----NAIVYNTLMDAFCKSNHVEEAEGLFVEM-KAKNVKPT 443
I EM K G+F N I + T++ + ++ EEA +F +M + +VKP
Sbjct: 271 ITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPN 330
Query: 444 AATFNILMHAYSR------------------RMQPKIVENLLAEMQ-------------D 472
T+ ++ A S + +IV + L M D
Sbjct: 331 VGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFD 390
Query: 473 IGLKPTAN--SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW 530
GL + S+ +I+ Y + A + + +M+K G KP++ +Y L+ A S +G
Sbjct: 391 NGLVCQRDLISWNSMIAVYAHHGHGKE-AIEMYNQMRKHGFKPSAVTYLNLLFACSHAGL 449
Query: 531 HEKAYVAFENMQREGIKP-SIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFN 589
EK F+++ R+ P E YT L+D RAG + + + + ++ +
Sbjct: 450 VEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAG---RLKDVTNFINCDDARLSRSFYG 506
Query: 590 ILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAAL 649
++ + A++V+ + + G TY ++ N YA G+ + ++ +M
Sbjct: 507 AILSACNVHNEVSIAKEVVKKVLETG-SDDAGTYVLMSNIYAANGKREEAAEMRMKMKEK 565
Query: 650 NLK 652
LK
Sbjct: 566 GLK 568
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 162/364 (44%), Gaps = 18/364 (4%)
Query: 301 RDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY 360
RD+ +N I+G G E A VY+ ME + ++PD VT +V+ LG +
Sbjct: 220 RDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK-E 278
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
F+E + G++ + ++ A++ F G + A I +EK+ + S + T++ +
Sbjct: 279 FYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVS----WTTMISGYA 334
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
+ ++ + LF +M+ K+V A + A +R Q + L EMQ KP
Sbjct: 335 RCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQA--KRGQDALA--LFQEMQTSNTKPDEI 390
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
+ +SA + + D+ ++K + T+L+ Y+ G +A F
Sbjct: 391 TMIHCLSACSQLGAL-DVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHG 449
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
+Q + S+ TYT ++ G GD T + + M+ + ++TF L+ G
Sbjct: 450 IQ---TRNSL-TYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGM 505
Query: 601 YMEARDVISEF-GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
RD S+ + L+P + Y+++++ R G + +L++ M ++ D+ +
Sbjct: 506 IQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMP---MEADAAVWG 562
Query: 660 TMIY 663
+++
Sbjct: 563 ALLF 566
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 158/362 (43%), Gaps = 23/362 (6%)
Query: 304 HIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFE 363
H++NA+I CG E+A KV+ ++ +R D V+ + ++ +K+G + K A Y ++
Sbjct: 192 HVHNASIHMFASCGDMENARKVF---DESPVR-DLVSWNCLINGYKKIGEAEK-AIYVYK 246
Query: 364 KMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSN 423
M +GVK + + +V S G ++R +++ G+ + N LMD F K
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 424 HVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ--DIGLKPTANS 481
+ EA +F ++ K T ++ ++ Y+R + L +M+ D+ L
Sbjct: 307 DIHEARRIFDNLE----KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL------ 356
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
+ +I + K+ D A F +M+ KP + + A S G + +
Sbjct: 357 WNAMIGGSVQAKRGQDALA-LFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
++ + ++ T+L+D + + G+ + ++ + + +T+ ++ G A G
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR----NSLTYTAIIGGLALHGDA 471
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA-LNLKPDSVTYST 660
A +E G+ P +T+ L++A GG +M + NL P YS
Sbjct: 472 STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI 531
Query: 661 MI 662
M+
Sbjct: 532 MV 533
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 135/346 (39%), Gaps = 55/346 (15%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T + R G+ D LF ++ +DV ++NA I G + R +DA +++ M+
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEE----KDVVLWNAMIGGSVQAKRGQDALALFQEMQT 382
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
N +PD +T ++ +LG W
Sbjct: 383 SNTKPDEITMIHCLSACSQLGALDVGIW-------------------------------- 410
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILM 451
I +EK + N + +L+D + K ++ EA +F ++ +N + T+ ++
Sbjct: 411 ----IHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRN----SLTYTAII 462
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMK-KVG 510
+ + EM D G+ P ++ L+SA M D F +MK +
Sbjct: 463 GGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACC-HGGMIQTGRDYFSQMKSRFN 521
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
+ P Y+ ++ +G E+A E+M E + LL G R G+ +
Sbjct: 522 LNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEA---DAAVWGALLFGCRMHGNVELGE 578
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYME----ARDVISEFG 612
K K ++ +++ + +L+DG + E AR +++E G
Sbjct: 579 KAAKKLL--ELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERG 622
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 122/276 (44%), Gaps = 26/276 (9%)
Query: 396 IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK----PTAATFNILM 451
IQ++M G+ + + L+ AFC +E +++ K +K P ++N+ +
Sbjct: 72 IQAQMIINGLILDPFASSRLI-AFCAL-----SESRYLDYSVKILKGIENPNIFSWNVTI 125
Query: 452 HAYSRRMQPKIVENLLAEMQDIGL---KPTANSYTCL--ISAYGRQKKMSDMAADAFLKM 506
+S PK L +M G +P +Y L + A R + M LK+
Sbjct: 126 RGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKL 185
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
+ ++ SH + A IH ++ G E A F+ E + ++ L++G+++ G+
Sbjct: 186 R---LELVSHVHNASIHMFASCGDMENARKVFD----ESPVRDLVSWNCLINGYKKIGEA 238
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
+ + ++KLM SE V+ VT LV + G ++ + GL T+ N L
Sbjct: 239 EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNAL 298
Query: 627 MNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
M+ +++ G + ++ + K V+++TMI
Sbjct: 299 MDMFSKCGDIHEARRIFDNLE----KRTIVSWTTMI 330
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 4/220 (1%)
Query: 399 EMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRM 458
+M+ +GV + Y+ MD CKS +A L+ EMK++ +K +N ++ A
Sbjct: 214 KMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQ 273
Query: 459 QPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSY 518
+ + EM++ G +P ++ +I +M D A +M K G +P S +Y
Sbjct: 274 GVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD-AYRMLDEMPKRGCQPDSITY 332
Query: 519 TALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMS 578
L + F M R G++P ++TY L+ F R G Q ++ +WK M
Sbjct: 333 MCLFSRLEKPS---EILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKE 389
Query: 579 EKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP 618
+N ++D ++G AR+ E + GL P
Sbjct: 390 SGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 4/204 (1%)
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
+++KM+ +GV + C G +A+ + EM+ + + + + YNT++ A
Sbjct: 211 YWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIG 270
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
S VE +F EM+ + +P AT N ++ + + +L EM G +P +
Sbjct: 271 ASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSI 330
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
+Y CL S R +K S++ + F +M + G++P +Y L+ + G+ + ++
Sbjct: 331 TYMCLFS---RLEKPSEILS-LFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKT 386
Query: 541 MQREGIKPSIETYTTLLDGFRRAG 564
M+ G P Y ++D + G
Sbjct: 387 MKESGDTPDSAAYNAVIDALIQKG 410
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 123/315 (39%), Gaps = 20/315 (6%)
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
+ K + LV A+ +++ + YN L+DA C+ HV EAE L KN
Sbjct: 123 VFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCF---GKN 178
Query: 440 VKPTAATF------NILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQK 493
V + N+++ +S+ + +M G+ SY+ + +
Sbjct: 179 VIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSG 238
Query: 494 KMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETY 553
K A + +MK +K +Y +I A S E F M+ G +P++ T+
Sbjct: 239 KPWK-AVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATH 297
Query: 554 TTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGK 613
T++ G + ++ M + +T+ L K + ++S FG+
Sbjct: 298 NTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSE------ILSLFGR 351
Query: 614 I---GLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXX 670
+ G+ P + TY MLM + R G + + K M PDS Y+ +I
Sbjct: 352 MIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGM 411
Query: 671 XXXXXXYHKQMIKSG 685
Y ++MI+ G
Sbjct: 412 LDMAREYEEEMIERG 426
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 114/279 (40%), Gaps = 7/279 (2%)
Query: 385 CAEGLVSRALIIQSEMEKKGVFSNAI-VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVK-P 442
C +AL + +E++ F + +N ++D K E + L M P
Sbjct: 56 CYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVP 115
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADA 502
TF I+ Y + + ++ D L+ + Y L+ A K + +
Sbjct: 116 NHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELC 174
Query: 503 FLKMKKVGIKPTSHS--YTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
F K S++ + ++ +S GW K ++ M EG+ + +Y+ +D
Sbjct: 175 FGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIM 234
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGF-AKQGQYMEARDVISEFGKIGLHPT 619
++G +K++K M S +++ V +N ++ A QG R V E + G P
Sbjct: 235 CKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIR-VFREMRERGCEPN 293
Query: 620 VMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
V T+N ++ G+ ++L EM +PDS+TY
Sbjct: 294 VATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY 332
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 147/369 (39%), Gaps = 11/369 (2%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKL-----GRS-A 355
DV + I G E A KV++ M IRP+ +T S+++ K+ GR
Sbjct: 196 DVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLM 255
Query: 356 KDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
K+ W + + N +V S C EG + I M + Y +
Sbjct: 256 KELWEYMK--NETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHM 313
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGL 475
+D+ C+ A + MK+K +KP ++N ++H + LL E +
Sbjct: 314 IDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEF 373
Query: 476 KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
P+ +Y L+ + ++ L ++K G T Y + V +
Sbjct: 374 FPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRT-RIYNIYLRGLCVMDNPTEIL 432
Query: 536 VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEG-TKVTFNILVDG 594
+M + +P T T+++G + G MK+ MM+ K VT N ++ G
Sbjct: 433 NVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCG 492
Query: 595 FAKQGQYMEARDVISE-FGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKP 653
QG+ EA DV++ + + P V+ YN ++ + + + + ++ ++
Sbjct: 493 LLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTA 552
Query: 654 DSVTYSTMI 662
DS TY+ +I
Sbjct: 553 DSTTYAIII 561
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/404 (19%), Positives = 155/404 (38%), Gaps = 55/404 (13%)
Query: 307 NAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMN 366
++ I L GR+++A + + PD TC++++ + RS ++
Sbjct: 94 SSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARL-LYSRSPVSTLGVIHRL- 151
Query: 367 RKGVKWSEEVL------GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
+ + +E + ++ C V A + +M +G + + + TL+ +C
Sbjct: 152 ---IGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYC 208
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM-------QDI 473
+ +E A +F EM+ ++P + T ++L+ + + + L+ E+ D
Sbjct: 209 EIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDT 268
Query: 474 GLKPTANSYTCLISAYGRQKKMSDM----------------------------------A 499
+K A + L+ + R+ +D+ A
Sbjct: 269 SMKAAA--FANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGA 326
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
A MK G+KP SY A+IH G +AY E PS TY L++
Sbjct: 327 ARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMES 386
Query: 560 FRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPT 619
+ DT + +LM+ ++ +NI + G E +V+ + P
Sbjct: 387 LCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPD 446
Query: 620 VMTYNMLMNAYARGGQHSKLPQLLKEMAALNL-KPDSVTYSTMI 662
T N ++N + G+ ++L +M PD+VT +T++
Sbjct: 447 EYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVM 490
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/484 (18%), Positives = 184/484 (38%), Gaps = 35/484 (7%)
Query: 189 GSCQKKELPLPEGVVGEIVQLARNLPENLTLEEALAQYGE-------RVSEKECWEVLEV 241
G C+ +EL + V E+ ++ P +LTL + + + R KE WE
Sbjct: 206 GYCEIRELEVAHKVFDEM-RVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWE---- 260
Query: 242 LGKERLLVCCLYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFR 301
+M+ + + + A L + R G + + + N+ +
Sbjct: 261 ---------------YMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVN 305
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
Y I L R A ++ M+ ++P + + ++ + K G + A+
Sbjct: 306 VEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMR-AYQL 364
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
E+ + SE +++S C E +A + M +K +YN + C
Sbjct: 365 LEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCV 424
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR--RMQP--KIVENLLAEMQDIGLKP 477
++ E + V M + +P T N +++ + R+ K++++++
Sbjct: 425 MDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAV 484
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
T N+ C + A GR ++ D+ M + IKP +Y A+I ++A
Sbjct: 485 TLNTVMCGLLAQGRAEEALDVLNRV---MPENKIKPGVVAYNAVIRGLFKLHKGDEAMSV 541
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAK 597
F +++ + TY ++DG K W ++ + + G +
Sbjct: 542 FGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQ 601
Query: 598 QGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
G +A + + G P V+ YN ++ +R G + Q+L+EM PD+VT
Sbjct: 602 SGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVT 661
Query: 658 YSTM 661
+ +
Sbjct: 662 WRIL 665
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/343 (19%), Positives = 140/343 (40%), Gaps = 27/343 (7%)
Query: 320 EDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGA 379
++A ++ + + RPD + S ++ + GR F++ +R+ + + G
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGR--------FDEAHRRFLLFLAS--GF 121
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAI-----------VYNTLMDAFCKSNHVEEA 428
I +++R L +S + GV I YN LM+ C V +A
Sbjct: 122 IPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDA 181
Query: 429 EGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISA 488
L +M+ + P TF L+ Y + ++ + EM+ G++P + + + LI
Sbjct: 182 HKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGG 241
Query: 489 YGRQKKMS---DMAADAFLKMK-KVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQR- 543
+ + + + + + + MK + + ++ L+ + G+ + ENM
Sbjct: 242 FLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLC 301
Query: 544 EGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYME 603
E + Y ++D R +I +M S+ ++ + ++N ++ G K G M
Sbjct: 302 ESVNVEF-AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMR 360
Query: 604 ARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
A ++ E + P+ TY +LM + + K +L+ M
Sbjct: 361 AYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELM 403
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 128/323 (39%), Gaps = 35/323 (10%)
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAK-------------------DAWYFF 362
W++YE I P+ +T IM+ V+ K GR + + F
Sbjct: 218 VWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVF 277
Query: 363 EKMNRKGVKWSEEVL---------------GAIVKSFCAEGLVSRALIIQSEMEKKGVFS 407
+ ++ S +L +V + EG + A + EM ++G +
Sbjct: 278 RVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSA 337
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
N+ VY + C+ V+EAE L EM+ V P TFN L+ ++R +
Sbjct: 338 NSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYC 397
Query: 468 AEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSV 527
M GL P+ +++ ++ + + + + + A + K G P H+Y+ LI +
Sbjct: 398 EVMVTRGLMPSCSAFNEMVKSVSKIENV-NRANEILTKSIDKGFVPDEHTYSHLIRGFIE 456
Query: 528 SGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVT 587
++A F M+ + P E + +L+ G G + K K+M +E
Sbjct: 457 GNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADI 516
Query: 588 FNILVDGFAKQGQYMEARDVISE 610
++ L+ F K G A V +E
Sbjct: 517 YDALIKAFQKIGDKTNADRVYNE 539
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 105/260 (40%), Gaps = 1/260 (0%)
Query: 403 KGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKI 462
K ++ N I ++ CK ++E L + K P+ L+ M+ +
Sbjct: 228 KRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEE 287
Query: 463 VENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALI 522
+LL + + Y+ ++ A ++ + A F +M + G S YT +
Sbjct: 288 SMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVS-ARKVFDEMLQRGFSANSFVYTVFV 346
Query: 523 HAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVE 582
G ++A M+ G+ P ET+ L+ GF R G + ++ ++M++ +
Sbjct: 347 RVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 406
Query: 583 GTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQL 642
+ FN +V +K A +++++ G P TY+ L+ + G + +L
Sbjct: 407 PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKL 466
Query: 643 LKEMAALNLKPDSVTYSTMI 662
EM + P + ++I
Sbjct: 467 FYEMEYRKMSPGFEVFRSLI 486
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 181/418 (43%), Gaps = 52/418 (12%)
Query: 269 RACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYES 328
RAC ++ G+ + L + + SS DV + NAAI C +A++V++
Sbjct: 390 RACALV------KGLSEGLQIYGLAIKSSLSL-DVCVANAAIDMYGKCQALAEAFRVFDE 442
Query: 329 MEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEG 388
M R D V+ + ++ + G+ + + F M R ++ E G+I+K+ C G
Sbjct: 443 MR----RRDAVSWNAIIAAHEQNGK-GYETLFLFVSMLRSRIEPDEFTFGSILKA-CTGG 496
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGL----------------F 432
+ + I S + K G+ SN+ V +L+D + K +EEAE +
Sbjct: 497 SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEEL 556
Query: 433 VEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQ 492
+M K ++ ++N ++ Y + Q + + L M ++G+ P +Y ++
Sbjct: 557 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL 616
Query: 493 KKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIET 552
+ + ++ K ++ + + L+ YS G + + FE + ++ T
Sbjct: 617 AS-AGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFE----KSLRRDFVT 671
Query: 553 YTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ--------YMEA 604
+ ++ G+ G + +++++ M+ E ++ VTF ++ A G YM
Sbjct: 672 WNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMK 731
Query: 605 RDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
RD GL P + Y+ +++ + G+ + +L++EM + D V + T++
Sbjct: 732 RDY-------GLDPQLPHYSNMVDILGKSGKVKRALELIREMP---FEADDVIWRTLL 779
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 2/224 (0%)
Query: 396 IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYS 455
I +M + G+F + + L+ + KS + E A F +K+ ++P + ++ Y
Sbjct: 406 ILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYV 465
Query: 456 RRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTS 515
+PK+ E L+ EMQ LK + Y L+ AY Q ++ AA M+ P S
Sbjct: 466 NAGKPKLGERLMKEMQAKELKASEEVYMALLRAYA-QMGDANGAAGISSSMQYASDGPLS 524
Query: 516 -HSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK 574
+Y+ + AY +G +KA F+ M++ G KP + L+ ++ +++
Sbjct: 525 FEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLL 584
Query: 575 LMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP 618
+ + +E +T+ +LVD A G EA ++ + ++G P
Sbjct: 585 QLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAP 628
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI 511
HAY K+ E +L E + + Y+ LI + ++ + D+ KM + GI
Sbjct: 365 HAYL-----KVAEGVLDEK---SFNASISDYSKLIHIHAKENHIEDVER-ILKKMSQNGI 415
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMK 571
P + TAL+H YS SG E+A AFEN++ G++P + Y ++ G+ AG + +
Sbjct: 416 FPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGER 475
Query: 572 IWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP-TVMTYNMLMNAY 630
+ K M +++++ ++ + L+ +A+ G A + S P + Y++ + AY
Sbjct: 476 LMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAY 535
Query: 631 ARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ GQ K EM L KPD + ++
Sbjct: 536 GKAGQVDKAKSNFDEMRKLGHKPDDKCIANLV 567
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 134/303 (44%), Gaps = 10/303 (3%)
Query: 356 KDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
+D +KM++ G+ A+V + G RA ++ G+ + +Y +
Sbjct: 401 EDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAM 460
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGL 475
+ + + + E L EM+AK +K + + L+ AY++ + + MQ
Sbjct: 461 ILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASD 520
Query: 476 KPTA-NSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKA 534
P + +Y+ + AYG+ ++ D A F +M+K+G KP L+ AY +KA
Sbjct: 521 GPLSFEAYSLFVEAYGKAGQV-DKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKA 579
Query: 535 YVAFENMQREGIKPSIETYTTLLDGFRRAG----DTQTMMKIWKLMMSEKVEGTKVTFNI 590
++++GI+ + TYT L+D G Q ++KI +L + E +V+
Sbjct: 580 LRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPFE-LQVSLCC 638
Query: 591 LVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALN 650
+ G + + ++A V+ E + + P ++ +++A RGG ++ K M A
Sbjct: 639 MYSGVRNEKKTLQALGVL-EAKRDQMGPN--EFDKVISALKRGGFEKDARRMYKYMEARK 695
Query: 651 LKP 653
P
Sbjct: 696 FLP 698
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 117/259 (45%), Gaps = 8/259 (3%)
Query: 408 NAIVYNTLMDAFCKSN---HVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
N + + L++ + N +++ AEG+ E K+ + + ++ L+H +++ + VE
Sbjct: 348 NRVDWIALINQLREGNTHAYLKVAEGVLDE---KSFNASISDYSKLIHIHAKENHIEDVE 404
Query: 465 NLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHA 524
+L +M G+ P + T L+ Y + + A +AF +K G++P Y A+I
Sbjct: 405 RILKKMSQNGIFPDILTATALVHMYSKSGNF-ERATEAFENLKSYGLRPDEKIYEAMILG 463
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMM-SEKVEG 583
Y +G + + MQ + +K S E Y LL + + GD I M +
Sbjct: 464 YVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPL 523
Query: 584 TKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLL 643
+ +++ V+ + K GQ +A+ E K+G P L+ AY K +LL
Sbjct: 524 SFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLL 583
Query: 644 KEMAALNLKPDSVTYSTMI 662
++ ++ +TY+ ++
Sbjct: 584 LQLEKDGIEIGVITYTVLV 602
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 169/371 (45%), Gaps = 32/371 (8%)
Query: 301 RDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVT-CSIM--VTVMRKLGRSAKD 357
RD+ +N ++G G A ++ +SM ++N++P +T S++ V+ +R + +
Sbjct: 199 RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEI 258
Query: 358 AWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMD 417
Y R G + A+V + G + A + M ++ V S +N+++D
Sbjct: 259 HGYAM----RSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVS----WNSMID 310
Query: 418 AFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRR---MQPKIVENLLAEMQDIG 474
A+ ++ + +EA +F +M + VKPT + +HA + + + + L E+ G
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL---G 367
Query: 475 LKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKA 534
L + LIS Y + K++ D AA F K++ T S+ A+I ++ +G A
Sbjct: 368 LDRNVSVVNSLISMYCKCKEV-DTAASMFGKLQS----RTLVSWNAMILGFAQNGRPIDA 422
Query: 535 YVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDG 594
F M+ +KP TY +++ T I ++M ++ LVD
Sbjct: 423 LNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDM 482
Query: 595 FAKQGQYMEAR---DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
+AK G M AR D++SE V T+N +++ Y G +L +EM +
Sbjct: 483 YAKCGAIMIARLIFDMMSE-------RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTI 535
Query: 652 KPDSVTYSTMI 662
KP+ VT+ ++I
Sbjct: 536 KPNGVTFLSVI 546
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 160/360 (44%), Gaps = 47/360 (13%)
Query: 303 VHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFF 362
V+I A + CG E A ++++ M + N+ V+ + M+ + + K+A F
Sbjct: 271 VNISTALVDMYAKCGSLETARQLFDGMLERNV----VSWNSMIDAYVQ-NENPKEAMLIF 325
Query: 363 EKMNRKGVKWSE-EVLGAIVKSFCAE-GLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
+KM +GVK ++ V+GA+ CA+ G + R I + G+ N V N+L+ +C
Sbjct: 326 QKMLDEGVKPTDVSVMGAL--HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYC 383
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
K V+ A +F +++++ T ++N ++ +++ +P N ++M+ +KP
Sbjct: 384 KCKEVDTAASMFGKLQSR----TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439
Query: 481 SYTCLISAYG---------------------RQKKMSDMAADAFLKMKKVGIK------- 512
+Y +I+A + ++ D + K + I
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499
Query: 513 PTSH--SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
H ++ A+I Y G+ + A FE MQ+ IKP+ T+ +++ +G + +
Sbjct: 500 SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGL 559
Query: 571 KIWKLMMSE-KVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
K + +M +E + + +VD + G+ EA D I + + + P V Y ++ A
Sbjct: 560 KCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQ---MPVKPAVNVYGAMLGA 616
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 117/278 (42%), Gaps = 13/278 (4%)
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
+V FC G V A + ++ K ++Y+T++ F K + +++A FV M+ +
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSK----LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDD 130
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
V+P F L+ + ++ + + + G + T L + Y + +++++ A
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNE-A 189
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
F +M + + S+ ++ YS +G A ++M E +KPS T ++L
Sbjct: 190 RKVFDRMPERDLV----SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245
Query: 560 FRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPT 619
+I M + LVD +AK G AR + L
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM----LERN 301
Query: 620 VMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVT 657
V+++N +++AY + + + ++M +KP V+
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 179/427 (41%), Gaps = 55/427 (12%)
Query: 269 RACTVLFPLL--GRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVY 326
+ CTV F LL GR L +FR+ D+ + N ++ CG E+A KV+
Sbjct: 68 KKCTV-FKLLIQGRIVHAHILQSIFRH--------DIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 327 ESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCA 386
E M + D VT + +++ + R DA FF +M R G +E L +++K+ A
Sbjct: 119 EKMPQ----RDFVTWTTLISGYSQHDRPC-DALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 387 EGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAAT 446
E + K G SN V + L+D + + +++A+ +F ++++N +
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN----DVS 229
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQ-------------- 492
+N L+ ++RR + L M G +P+ SY L A
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 493 ---KKMSDMAADAFLKM-KKVG------------IKPTSHSYTALIHAYSVSGWHEKAYV 536
+K+ A + L M K G K S+ +L+ AY+ G+ ++A
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349
Query: 537 AFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFA 596
FE M+R GI+P+ ++ ++L +G ++LM + + + +VD
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLG 409
Query: 597 KQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSV 656
+ G A I E + + PT + L+NA R ++++L E L PD
Sbjct: 410 RAGDLNRALRFIEE---MPIEPTAAIWKALLNA-CRMHKNTELGAYAAEH-VFELDPDDP 464
Query: 657 TYSTMIY 663
++Y
Sbjct: 465 GPHVILY 471
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 137/338 (40%), Gaps = 45/338 (13%)
Query: 387 EGLVSRALIIQSEMEKKGVFSNAIVY-NTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAA 445
+G + A I+QS +F + IV NTL++ + K +EEA +F +M ++
Sbjct: 78 QGRIVHAHILQS------IFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDF----V 127
Query: 446 TFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKK----------- 494
T+ L+ YS+ +P +M G P + + +I A +++
Sbjct: 128 TWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFC 187
Query: 495 ------MSDMAADAFLKM-KKVGIKPTSH------------SYTALIHAYSVSGWHEKAY 535
+ A L + + G+ + S+ ALI ++ EKA
Sbjct: 188 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKAL 247
Query: 536 VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGF 595
F+ M R+G +PS +Y +L G + + M+ + N L+D +
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMY 307
Query: 596 AKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDS 655
AK G +AR + K V+++N L+ AYA+ G + +EM + ++P+
Sbjct: 308 AKSGSIHDARKIFDRLAK----RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Query: 656 VTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSY 693
+++ +++ Y++ M K G V + Y
Sbjct: 364 ISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHY 401
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 148/303 (48%), Gaps = 23/303 (7%)
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
F E+ + V W+ +++K++ G V A ++ +M+ + + I +NT++D +
Sbjct: 273 FRERFCKNVVSWN-----SMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYV 323
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
+ +E+A LF EM ++ A ++N+++ Y+ ++ + + + K T
Sbjct: 324 HVSRMEDAFALFSEMPNRD----AHSWNMMVSGYASVGNVELARHYFEKTPE---KHTV- 375
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
S+ +I+AY + K + A D F++M G KP H+ T+L+ A S + + +
Sbjct: 376 SWNSIIAAYEKNKDYKE-AVDLFIRMNIEGEKPDPHTLTSLLSA-STGLVNLRLGMQMHQ 433
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
+ + + P + + L+ + R G+ +I+ M K++ +T+N ++ G+A G
Sbjct: 434 IVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEM---KLKREVITWNAMIGGYAFHGN 490
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKL-PQLLKEMAALNLKPDSVTYS 659
EA ++ G++P+ +T+ ++NA A G + Q + M+ ++P YS
Sbjct: 491 ASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYS 550
Query: 660 TMI 662
+++
Sbjct: 551 SLV 553
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 163/385 (42%), Gaps = 63/385 (16%)
Query: 283 MGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCS 342
+GD +V R L K RD +N I G + R EDA+ ++ M R H + +
Sbjct: 294 VGD--VVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPN---RDAH-SWN 347
Query: 343 IMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEK 402
+MV+ +G + + A ++FEK K
Sbjct: 348 MMVSGYASVG-NVELARHYFEKTPEK---------------------------------- 372
Query: 403 KGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKI 462
+ + +N+++ A+ K+ +EA LF+ M + KP T L+ A + + +
Sbjct: 373 -----HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLR- 426
Query: 463 VENLLAEMQDIGLK---PTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYT 519
L +M I +K P + LI+ Y R ++ + + F +MK +K ++
Sbjct: 427 ---LGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIME-SRRIFDEMK---LKREVITWN 479
Query: 520 ALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMS- 578
A+I Y+ G +A F +M+ GI PS T+ ++L+ AG + MMS
Sbjct: 480 AMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSV 539
Query: 579 EKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSK 638
K+E ++ LV+ + QGQ+ EA +I+ + P + L++A R +
Sbjct: 540 YKIEPQMEHYSSLVNVTSGQGQFEEAMYIIT---SMPFEPDKTVWGALLDA-CRIYNNVG 595
Query: 639 LPQLLKEMAALNLKPDSVTYSTMIY 663
L + E A L+P+S T ++Y
Sbjct: 596 LAHVAAE-AMSRLEPESSTPYVLLY 619
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/407 (20%), Positives = 168/407 (41%), Gaps = 42/407 (10%)
Query: 292 RNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKL 351
R++ + R+ +N ISG + A K+++ M K ++ VT + M++
Sbjct: 60 RDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV----VTWNTMISGYVSC 115
Query: 352 G--RSAKDAWYFFEKM-NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSN 408
G R ++A F++M +R W+ ++ + + AL++ +M ++ N
Sbjct: 116 GGIRFLEEARKLFDEMPSRDSFSWN-----TMISGYAKNRRIGEALLLFEKMPER----N 166
Query: 409 AIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLA 468
A+ ++ ++ FC++ V+ A LF +M K+ P A L+ R + V
Sbjct: 167 AVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKN-ERLSEAAWVLGQYG 225
Query: 469 EMQDIGLKPTANSYTCLISAYGRQ----------KKMSDMAADAFLKMKKVGIKPTSHSY 518
+ G + +Y LI YG++ ++ D+ D + S+
Sbjct: 226 SLVS-GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSW 284
Query: 519 TALIHAYSVSGWHEKAYVAFENMQ-REGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMM 577
++I AY G A + F+ M+ R+ I ++ T++DG+ + ++ M
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDRDTI-----SWNTMIDGYVHVSRMEDAFALFSEMP 339
Query: 578 SEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHS 637
+ ++N++V G+A G AR F K TV ++N ++ AY + +
Sbjct: 340 NRDAH----SWNMMVSGYASVGNVELARHY---FEKTPEKHTV-SWNSIIAAYEKNKDYK 391
Query: 638 KLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKS 684
+ L M KPD T ++++ H+ ++K+
Sbjct: 392 EAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT 438
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 144/330 (43%), Gaps = 33/330 (10%)
Query: 310 ISGLLCCGRYED---AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMN 366
IS CG+ D +V++ M +++I+ D C+ ++ K G S A F++M+
Sbjct: 238 ISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCG-SLDYARALFDEMS 296
Query: 367 RKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVE 426
K GAI+ + A GLV A+ + SEME G+ + +N ++ ++NH E
Sbjct: 297 EK----DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLST----WNAMISGLMQNNHHE 348
Query: 427 EAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLI 486
E F EM +P T + L+ + + K + + A G T +I
Sbjct: 349 EVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSII 408
Query: 487 SAYGR------QKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
Y + +++ D D L ++TA+I AY+V G + A F+
Sbjct: 409 DNYAKLGFLLGAQRVFDNCKDRSLI-----------AWTAIITAYAVHGDSDSACSLFDQ 457
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE-KVEGTKVTFNILVDGFAKQG 599
MQ G KP T T +L F +GD+ I+ M+++ +E + +V ++ G
Sbjct: 458 MQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAG 517
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
+ +A + IS K+ + P + L+N
Sbjct: 518 KLSDAMEFIS---KMPIDPIAKVWGALLNG 544
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 146/377 (38%), Gaps = 91/377 (24%)
Query: 293 NLPSSKKF------RDVHIYNAAISGLLCCGRYEDAWKVYESM-EKDNIRPDHVTCSIMV 345
N+ S++K RDV +N+ ISG G +ED K+Y++M + +P+ VT ++
Sbjct: 182 NIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVT---VI 238
Query: 346 TVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGV 405
+V + G+S S+ + G L + +M + +
Sbjct: 239 SVFQACGQS------------------SDLIFG---------------LEVHKKMIENHI 265
Query: 406 FSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVEN 465
+ + N ++ + K ++ A LF EM K+ + T+ ++ Y K
Sbjct: 266 QMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKD----SVTYGAIISGYMAHGLVKEAMA 321
Query: 466 LLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAY 525
L +EM+ IGL +++ +IS G+ +H
Sbjct: 322 LFSEMESIGL----STWNAMIS----------------------GLMQNNH--------- 346
Query: 526 SVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK 585
HE+ +F M R G +P+ T ++LL + + + +I + +
Sbjct: 347 -----HEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNI 401
Query: 586 VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 645
++D +AK G + A+ V +++ + ++ AYA G L +
Sbjct: 402 YVTTSIIDNYAKLGFLLGAQRVFDNCKD----RSLIAWTAIITAYAVHGDSDSACSLFDQ 457
Query: 646 MAALNLKPDSVTYSTMI 662
M L KPD VT + ++
Sbjct: 458 MQCLGTKPDDVTLTAVL 474
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 171/400 (42%), Gaps = 36/400 (9%)
Query: 288 MVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIR-PDHVTCSIMVT 346
+++F +LP R + + IS CC R A Y + D++ P+ + M
Sbjct: 29 LIVFNSLP-----RQSYWASRIIS---CCTRLR-APSYYTRLIFDSVTFPNVFVVNSMFK 79
Query: 347 VMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVF 406
K+ A D +E+ +R G+ ++KS G++ +AL+ EK G F
Sbjct: 80 YFSKMD-MANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALV-----EKLGFF 133
Query: 407 SNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENL 466
+ V N +MD + K VE A +F ++ + + +N+++ Y + + L
Sbjct: 134 KDPYVRNVIMDMYVKHESVESARKVFDQISQRK----GSDWNVMISGYWKWGNKEEACKL 189
Query: 467 LAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYS 526
D+ + S+T +I+ + + K + + A F +M + + S+ A++ Y+
Sbjct: 190 F----DMMPENDVVSWTVMITGFAKVKDLEN-ARKYFDRMPEKSVV----SWNAMLSGYA 240
Query: 527 VSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKV 586
+G+ E A F +M R G++P+ T+ ++ D + KL+ ++V
Sbjct: 241 QNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCF 300
Query: 587 TFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
L+D AK AR + F ++G ++T+N +++ Y R G S QL M
Sbjct: 301 VKTALLDMHAKCRDIQSARRI---FNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTM 357
Query: 647 AALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQ 686
N+ V+++++I + + MI G
Sbjct: 358 PKRNV----VSWNSLIAGYAHNGQAALAIEFFEDMIDYGD 393
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 160/361 (44%), Gaps = 28/361 (7%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
+N ISG G E+A K+++ M ++++ V+ ++M+T K+ + ++A +F++M
Sbjct: 170 WNVMISGYWKWGNKEEACKLFDMMPENDV----VSWTVMITGFAKV-KDLENARKYFDRM 224
Query: 366 NRKGV-KWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDA--FCKS 422
K V W+ A++ + G AL + ++M + GV N + ++ A F
Sbjct: 225 PEKSVVSWN-----AMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRAD 279
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY 482
+ + ++ K + T + MHA R +Q + E+ G + ++
Sbjct: 280 PSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQS--ARRIFNEL---GTQRNLVTW 334
Query: 483 TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQ 542
+IS Y R MS A F M K + S+ +LI Y+ +G A FE+M
Sbjct: 335 NAMISGYTRIGDMSS-ARQLFDTMPKRNVV----SWNSLIAGYAHNGQAALAIEFFEDMI 389
Query: 543 REG-IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
G KP T ++L D + I + +++ + L+ +A+ G
Sbjct: 390 DYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNL 449
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
EA+ V E + V++YN L A+A G + LL +M ++PD VTY+++
Sbjct: 450 WEAKRVFDEMKE----RDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSV 505
Query: 662 I 662
+
Sbjct: 506 L 506
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 159/361 (44%), Gaps = 37/361 (10%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
LF +P + DV + I+G E+A K ++ M + ++ V+ + M++
Sbjct: 189 LFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMPEKSV----VSWNAMLSGYA 240
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVK--SFCAEGLVSRALIIQSEMEKKGVFS 407
+ G + +DA F M R GV+ +E ++ SF A+ ++R+L+ +++K V
Sbjct: 241 QNGFT-EDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLV--KLIDEKRVRL 297
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
N V L+D K ++ A +F E+ + T+N ++ Y+R + ++
Sbjct: 298 NCFVKTALLDMHAKCRDIQSARRIFNELGTQR---NLVTWNAMISGYTR------IGDMS 348
Query: 468 AEMQDIGLKPTAN--SYTCLISAYGRQKKMSDMAADAFLKMKKVG-IKPTSHSYTALIHA 524
+ Q P N S+ LI+ Y + + +A + F M G KP + +++ A
Sbjct: 349 SARQLFDTMPKRNVVSWNSLIAGYAHNGQAA-LAIEFFEDMIDYGDSKPDEVTMISVLSA 407
Query: 525 YSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
E + +++ IK + Y +L+ + R G+ +++ M V
Sbjct: 408 CGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDV--- 464
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
V++N L FA G +E +++S+ G+ P +TY ++ A R G LLK
Sbjct: 465 -VSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAG-------LLK 516
Query: 645 E 645
E
Sbjct: 517 E 517
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 141/328 (42%), Gaps = 39/328 (11%)
Query: 292 RNLPSSKKFRD------VHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMV 345
++L +++K+ D V +NA +SG G EDA +++ M + +RP+ T I++
Sbjct: 212 KDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVI 271
Query: 346 TVMR-----KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEM 400
+ L RS + ++ K V+ + V A++ + A I +E+
Sbjct: 272 SACSFRADPSLTRS------LVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL 325
Query: 401 EKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQP 460
G N + +N ++ + + + A LF M +NV ++N L+ Y+ Q
Sbjct: 326 ---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNV----VSWNSLIAGYAHNGQA 378
Query: 461 KIVENLLAEMQDIG-LKPTANSYTCLISAYGRQKKMSDMA-ADAFLK-MKKVGIKPTSHS 517
+ +M D G KP + ++SA G M+D+ D + ++K IK
Sbjct: 379 ALAIEFFEDMIDYGDSKPDEVTMISVLSACGH---MADLELGDCIVDYIRKNQIKLNDSG 435
Query: 518 YTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMM 577
Y +LI Y+ G +A F+ M+ + +Y TL F GD + + M
Sbjct: 436 YRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMK 491
Query: 578 SEKVEGTKVTFNILVD-----GFAKQGQ 600
E +E +VT+ ++ G K+GQ
Sbjct: 492 DEGIEPDRVTYTSVLTACNRAGLLKEGQ 519
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 173/388 (44%), Gaps = 35/388 (9%)
Query: 255 FQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFR---DVHIYNAAIS 311
F++MR +E VT +++ + + + +FR L K R DV +YN AIS
Sbjct: 165 FEFMRKKEN--VTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAIS 222
Query: 312 GLLCCGRYEDAW---KVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRK 368
CGR + + +++ M+ D +T S++V++ + GRS + E +N K
Sbjct: 223 ---LCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNK 279
Query: 369 GVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEA 428
+ E+ + A++ + E AL I M KKG+ N + NTL+++ K+ V
Sbjct: 280 -ISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLV 338
Query: 429 EGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY---TCL 485
++ +K+ KP T+N L+ A + + + V L ++ L N Y T +
Sbjct: 339 FKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENL-CCLNEYLYNTAM 397
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
+S ++ + A +M+ G+ ++ SY +I A S + A + +E+M +
Sbjct: 398 VSC--QKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRD 455
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE------KVEGTKVTFNILVDGFAKQG 599
KP+ TY +L+ IW + E KVE +N + G +
Sbjct: 456 CKPNTFTYLSLVRSC-----------IWGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRR 504
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLM 627
++ A+++ + ++GL P T M++
Sbjct: 505 EFKFAKELYVKMREMGLEPDGKTRAMML 532
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 172/347 (49%), Gaps = 11/347 (3%)
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRK----GVKWSEEVL 377
A ++++SM ++P+ C+ ++ + + G K A+ FE M +K G +S +L
Sbjct: 126 ALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQK-AFTVFEFMRKKENVTGHTYSL-ML 183
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
A+ + E + ++ E +++ F + ++YNT + + N+V E E ++ MK
Sbjct: 184 KAVAEVKGCESALRMFRELEREPKRRSCF-DVVLYNTAISLCGRINNVYETERIWRVMKG 242
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
T T+++L+ + R + ++ ++ EM + + ++ +ISA +++K D
Sbjct: 243 DGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKW-D 301
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
+A F M K G+KP + LI++ +G + + ++ G KP T+ LL
Sbjct: 302 LALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALL 361
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEG-TKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
+A + +++++ ++ SE + + +N + K G + +A ++ E GL
Sbjct: 362 TALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGL 421
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKE-MAALNLKPDSVTYSTMI 662
+ +YN++++A + + SK+ L+ E MA + KP++ TY +++
Sbjct: 422 TVSTSSYNLVISACEKS-RKSKVALLVYEHMAQRDCKPNTFTYLSLV 467
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 143/326 (43%), Gaps = 18/326 (5%)
Query: 348 MRKLGR--SAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGV 405
+RKL R + A F+ M G++ + + + G + +A + M KK
Sbjct: 114 LRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKEN 173
Query: 406 FSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKI--- 462
+ Y+ ++ A + E A +F E++ + + + F+++++ + + +I
Sbjct: 174 VTGH-TYSLMLKAVAEVKGCESALRMFRELEREPKRRSC--FDVVLYNTAISLCGRINNV 230
Query: 463 --VENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTA 520
E + M+ G T +Y+ L+S + R + S++A D + +M I + A
Sbjct: 231 YETERIWRVMKGDGHIGTEITYSLLVSIFVRCGR-SELALDVYDEMVNNKISLREDAMYA 289
Query: 521 LIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEK 580
+I A + + A F++M ++G+KP++ TL++ +AG + K++ ++ S
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 581 VEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVM----TYNMLMNAYARGGQH 636
+ + T+N L+ K +Y DV+ F I YN M + + G
Sbjct: 350 HKPDEYTWNALLTALYKANRY---EDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYW 406
Query: 637 SKLPQLLKEMAALNLKPDSVTYSTMI 662
K +LL EM L + +Y+ +I
Sbjct: 407 EKAVKLLYEMEGSGLTVSTSSYNLVI 432
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 32/291 (10%)
Query: 220 EEALAQYGERVS------EKECWEVLEVLGKERLLVCCLYFFQWM--RAQEPSLVTPRAC 271
E AL Y E V+ E + ++ KE L FQ M + +P+LV AC
Sbjct: 266 ELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLV---AC 322
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
L LG+AG + ++ L S D + +NA ++ L RYED +++
Sbjct: 323 NTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLF----- 377
Query: 332 DNIRPDHVTC-------SIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSF 384
D IR +++ C + MV+ +KLG K +E M G+ S ++ S
Sbjct: 378 DMIRSENLCCLNEYLYNTAMVSC-QKLGYWEKAVKLLYE-MEGSGLTVSTSSYNLVI-SA 434
Query: 385 CAEGLVSR-ALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPT 443
C + S+ AL++ M ++ N Y +L+ + + +E E + K V+P
Sbjct: 435 CEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDIL-----KKVEPD 489
Query: 444 AATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKK 494
+ +N +H R + K + L +M+++GL+P + ++ + +K
Sbjct: 490 VSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKKHQK 540
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 123/281 (43%), Gaps = 7/281 (2%)
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMK-AKNVKPTAATFNILMHAYSR---RMQPKIVENL 466
+Y +++ F ++ +E E + +K K + + F LM Y R+ I +
Sbjct: 97 LYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAI--EI 154
Query: 467 LAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYS 526
L M D G P++ S+ +++ K+ D F+ K+G++ + LI
Sbjct: 155 LFGMPDFGCWPSSKSFNFILNLLV-SAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLC 213
Query: 527 VSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKV 586
SG E A + ++ +P++ T++ L+ GF G + K+ + M E++E +
Sbjct: 214 ESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTI 273
Query: 587 TFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
TFNIL+ G K+G+ E D++ G P TY ++ ++ + +++ +M
Sbjct: 274 TFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQM 333
Query: 647 AALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQV 687
+ ++P ++Y M+ +QM+ G V
Sbjct: 334 ISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFV 374
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/296 (18%), Positives = 125/296 (42%), Gaps = 37/296 (12%)
Query: 368 KGVKWSEEVLGAIVKSFCA-EGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVE 426
K ++SEE +++ + G ++RA+ I M G + ++ +N +++ + +
Sbjct: 125 KRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFD 184
Query: 427 EAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLI 486
E +FV V+ A NIL+ NL A +Q L+
Sbjct: 185 EIHKIFVSAPKLGVEIDACCLNILIKGLCES------GNLEAALQ-------------LL 225
Query: 487 SAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGI 546
+ +QK +P +++ LI + G E+A+ E M++E I
Sbjct: 226 DEFPQQKS-----------------RPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERI 268
Query: 547 KPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARD 606
+P T+ L+ G R+ G + + + + M + E T+ ++ G + + +EA++
Sbjct: 269 EPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKE 328
Query: 607 VISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
++S+ G+ P+ ++Y ++ ++ +L++M P ++ + ++
Sbjct: 329 MMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 101/230 (43%), Gaps = 18/230 (7%)
Query: 269 RACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYES 328
RA +LF GM D F PSSK F I N +S L +++ K++ S
Sbjct: 150 RAIEILF------GMPD-----FGCWPSSKSFN--FILNLLVSAKL----FDEIHKIFVS 192
Query: 329 MEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEG 388
K + D +I++ + + G + + A ++ ++ + + +++ FC +G
Sbjct: 193 APKLGVEIDACCLNILIKGLCESG-NLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKG 251
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
A + MEK+ + + I +N L+ K VEE L MK K +P T+
Sbjct: 252 KFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQ 311
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
+++ + + + ++++M G++P+ SY ++ K + +M
Sbjct: 312 EVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEM 361
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 123/268 (45%), Gaps = 31/268 (11%)
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
N +N+++ ++ K +V++A GL EM+ +KP T+N L+ Y+ + K +L
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 468 AEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSY--------- 518
MQ GLKP+ +S + L+ A +A LK+ K H Y
Sbjct: 214 KRMQIAGLKPSTSSISSLLQA---------VAEPGHLKLGK-----AIHGYILRNQLWYD 259
Query: 519 ----TALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK 574
T LI Y +G+ A + F+ M + +I + +L+ G A + +
Sbjct: 260 VYVETTLIDMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMI 315
Query: 575 LMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGG 634
M E ++ +T+N L G+A G+ +A DVI + + G+ P V+++ + + ++ G
Sbjct: 316 RMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNG 375
Query: 635 QHSKLPQLLKEMAALNLKPDSVTYSTMI 662
++ +M + P++ T ST++
Sbjct: 376 NFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 148/373 (39%), Gaps = 71/373 (19%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR-----KLGRSA- 355
D+ +N+ +SG G +DA V + M+ ++P + S ++ + KLG++
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 356 -----KDAWY-----------------------FFEKMNRKG-VKWSEEVLGAIVKSFCA 386
WY F+ M+ K V W+ V G
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 308
Query: 387 EGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAAT 446
+ + AL+I+ MEK+G+ +AI +N+L + E+A + +MK K V P +
Sbjct: 309 D---AEALMIR--MEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM----------- 495
+ + S+ + + +MQ+ G+ P A + + L+ G +
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCL 423
Query: 496 -SDMAADAFLKMKKV-----------------GIKPTS-HSYTALIHAYSVSGWHEKAYV 536
++ DA++ V GIK S S+ ++ Y++ G E+
Sbjct: 424 RKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIA 483
Query: 537 AFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE-KVEGTKVTFNILVDGF 595
AF M G++P T+T++L + +G Q K + LM S + T + +VD
Sbjct: 484 AFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLL 543
Query: 596 AKQGQYMEARDVI 608
+ G EA D I
Sbjct: 544 GRSGYLDEAWDFI 556
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 166/388 (42%), Gaps = 27/388 (6%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
L + + GM D+ +F N+ +DV +NA ++G GR+EDA +++E M++
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNM----SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQE 323
Query: 332 DNIRPDHVTCSIMVT--VMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGL 389
+ I+ D VT S ++ R LG A +M G+K +E L +++ + G
Sbjct: 324 EKIKMDVVTWSAAISGYAQRGLGYEALGV---CRQMLSSGIKPNEVTLISVLSGCASVGA 380
Query: 390 VSRALIIQS-------EMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKP 442
+ I ++ K G +V N L+D + K V+ A +F + K +
Sbjct: 381 LMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK--ER 438
Query: 443 TAATFNILMHAYSRRMQPKIVENLLAEM--QDIGLKPTANSYTCLISAYGRQKKMS-DMA 499
T+ +++ YS+ LL+EM +D +P A + +C + A +
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
A+ + P S LI Y+ G A + F+NM + + T+T+L+ G
Sbjct: 499 IHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNM----MAKNEVTWTSLMTG 553
Query: 560 FRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKI-GLHP 618
+ G + + I+ M + VT +++ + G + + + + G+ P
Sbjct: 554 YGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSP 613
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEM 646
Y L++ R G+ + +L++EM
Sbjct: 614 GPEHYACLVDLLGRAGRLNAALRLIEEM 641
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 120/302 (39%), Gaps = 54/302 (17%)
Query: 404 GVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIV 463
G SN V N L+ + + + +A +F EM +V ++N ++ +Y++ +PK+
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDV----VSWNSIIESYAKLGKPKVA 212
Query: 464 ENLLAEM-QDIGLKP---------------------------------TANSY--TCLIS 487
+ + M + G +P N + CL+
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVD 272
Query: 488 AYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIK 547
Y + M D A F M + S+ A++ YS G E A FE MQ E IK
Sbjct: 273 MYAKCGMM-DEANTVFSNMSVKDVV----SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 548 PSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDV 607
+ T++ + G+ + G + + + M+S ++ +VT ++ G A G M +++
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 608 IS-------EFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
+ K G M N L++ YA+ + + ++ + D VT++
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSP--KERDVVTWTV 445
Query: 661 MI 662
MI
Sbjct: 446 MI 447
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 155/358 (43%), Gaps = 13/358 (3%)
Query: 261 QEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYE 320
+E V + ++ L +A + D+ + + R P D YN I G
Sbjct: 123 KEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLN 182
Query: 321 DAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAI 380
A + + M+ + PD +T + M+ G+ DAW ++M++ + I
Sbjct: 183 IADMLIKEMDCVGLYPDVITYTSMINGYCNAGK-IDDAWRLAKEMSKHDCVLNSVTYSRI 241
Query: 381 VKSFCAEGLVSRALIIQSEMEKK---GVFS-NAIVYNTLMDAFCKSNHVEEAEGLFVEMK 436
++ C G + RAL + +EMEK+ G+ S NA+ Y ++ AFC+ VEEA + M
Sbjct: 242 LEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMG 301
Query: 437 AKNVKPTAATFNILMHAYSRRMQP-KIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
+ P T +L+ + K + L+ ++ +G + ++ + R K+
Sbjct: 302 NRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRW 361
Query: 496 SDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIET--Y 553
+ A F M G++P + + + + + ++ ++ ++++ +K +I++ +
Sbjct: 362 EE-AEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIH 420
Query: 554 TTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF 611
LL G + G++ K+ K M+ +K+ +++ K G D++S F
Sbjct: 421 AVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGD----EDLMSRF 474
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 77/175 (44%), Gaps = 4/175 (2%)
Query: 492 QKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIE 551
Q ++D A K + + + +Y +I ++ G A + + M G+ P +
Sbjct: 142 QANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVI 201
Query: 552 TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEF 611
TYT++++G+ AG ++ K M VT++ +++G K G A ++++E
Sbjct: 202 TYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEM 261
Query: 612 GKIG----LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
K + P +TY +++ A+ + + +L M P+ VT +I
Sbjct: 262 EKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLI 316
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 325 VYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSF 384
V ES K+ + T I++T+ + A +A + K V +++ F
Sbjct: 117 VIESYRKEECFVNVKTMRIVLTLCNQ-ANLADEALWVLRKFPEFNVCADTVAYNLVIRLF 175
Query: 385 CAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTA 444
+G ++ A ++ EM+ G++ + I Y ++++ +C + +++A L EM + +
Sbjct: 176 ADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNS 235
Query: 445 ATFNILMHAYSRRMQPKIVENLLAEM--QDIG--LKPTANSYTCLISAYGRQKKMSDMAA 500
T++ ++ + + LLAEM +D G + P A +YT +I A+ ++++ + A
Sbjct: 236 VTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEE-AL 294
Query: 501 DAFLKMKKVGIKPTSHSYTALIHA 524
+M G P + LI
Sbjct: 295 LVLDRMGNRGCMPNRVTACVLIQG 318
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 179/417 (42%), Gaps = 57/417 (13%)
Query: 274 LFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDN 333
L + G+ G+ D +F +P R+ +NA + G + G+ E+A +++ M K
Sbjct: 214 LADMYGKCGVLDDASKVFDEIPD----RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG 269
Query: 334 IRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRA 393
+ P VT S ++ +G GV+ EG S A
Sbjct: 270 VEPTRVTVSTCLSASANMG----------------GVE---------------EGKQSHA 298
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA 453
+ I + ME + +L++ +CK +E AE +F M K+V T+N+++
Sbjct: 299 IAIVNGMELDNILGT-----SLLNFYCKVGLIEYAEMVFDRMFEKDV----VTWNLIISG 349
Query: 454 YSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM-KKVGIK 512
Y +Q +VE+ + Q + L+ Y C+ A MS A LK+ K+V
Sbjct: 350 Y---VQQGLVEDAIYMCQLMRLEKL--KYDCVTLA----TLMSAAARTENLKLGKEVQCY 400
Query: 513 PTSHSYTA-LIHAYSVSGWHEK--AYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
HS+ + ++ A +V + K + V + + ++ + + TLL + +G +
Sbjct: 401 CIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEA 460
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
++++ M E V +T+N+++ + GQ EA+D+ + G+ P ++++ +MN
Sbjct: 461 LRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNG 520
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQ 686
+ G + L++M L+P++ + + + H +I++ Q
Sbjct: 521 MVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQ 577
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 156/363 (42%), Gaps = 46/363 (12%)
Query: 301 RDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY 360
+DV +N ISG + G EDA + + M + ++ D VT + T+M R+
Sbjct: 338 KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVT---LATLMSAAARTE----- 389
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
N K LG V+ +C I+ E S+ ++ +T+MD +
Sbjct: 390 -----NLK--------LGKEVQCYC----------IRHSFE-----SDIVLASTVMDMYA 421
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
K + +A+ +F V+ +N L+ AY+ L MQ G+ P
Sbjct: 422 KCGSIVDAKKVF----DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVI 477
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
++ +I + R ++ D A D FL+M+ GI P S+T +++ +G E+A +
Sbjct: 478 TWNLIILSLLRNGQV-DEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRK 536
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI-LVDGFAKQG 599
MQ G++P+ + T L I ++ + V+ LVD +AK G
Sbjct: 537 MQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCG 596
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
+A V FG L+ + N +++AYA G + L + + + LKPD++T +
Sbjct: 597 DINKAEKV---FGS-KLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITIT 652
Query: 660 TMI 662
++
Sbjct: 653 NVL 655
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 26/304 (8%)
Query: 316 CGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEE 375
CG DA KV++S + D + + ++ + G S +A F M +GV +
Sbjct: 423 CGSIVDAKKVFDS----TVEKDLILWNTLLAAYAESGLSG-EALRLFYGMQLEGVPPNVI 477
Query: 376 VLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM 435
I+ S G V A + +M+ G+ N I + T+M+ ++ EEA +M
Sbjct: 478 TWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Query: 436 KAKNVKPTAATFNILMHAYS--------RRMQPKIVENLLAEMQDIGLKPTANSYTCLIS 487
+ ++P A + + + A + R + I+ NL Q L S L+
Sbjct: 538 QESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNL----QHSSLVSIETS---LVD 590
Query: 488 AYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIK 547
Y + ++ A+ K P S+ A+I AY++ G ++A + +++ G+K
Sbjct: 591 MYAKCGDINK--AEKVFGSKLYSELPLSN---AMISAYALYGNLKEAIALYRSLEGVGLK 645
Query: 548 PSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEK-VEGTKVTFNILVDGFAKQGQYMEARD 606
P T T +L AGD ++I+ ++S++ ++ + ++VD A G+ +A
Sbjct: 646 PDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALR 705
Query: 607 VISE 610
+I E
Sbjct: 706 LIEE 709
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 161/371 (43%), Gaps = 17/371 (4%)
Query: 292 RNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKL 351
R + K R+V + ISG ++ ++ M+ + +P+ T + + V+ +
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 352 GRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIV 411
G + + + G+ + V +++ + G V +A I+ + E K V +
Sbjct: 208 GVGGR-GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV----VT 262
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
+N+++ + + EA G+F M+ V+ + ++F ++ + + + E L +
Sbjct: 263 WNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVV 322
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
G N T L+ AY + M DA K++G S+TA+I + +
Sbjct: 323 KYGFLFDQNIRTALMVAYSKCTAM----LDALRLFKEIGCVGNVVSWTAMISGFLQNDGK 378
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
E+A F M+R+G++P+ TY+ +L ++ ++ K E + L
Sbjct: 379 EEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVK----TNYERSSTVGTAL 434
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
+D + K G+ EA V S ++ ++ ++ YA+ G+ ++ E+ +
Sbjct: 435 LDAYVKLGKVEEAAKVFSGID----DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGI 490
Query: 652 KPDSVTYSTMI 662
KP+ T+S+++
Sbjct: 491 KPNEFTFSSIL 501
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 171/372 (45%), Gaps = 26/372 (6%)
Query: 292 RNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKL 351
R L + + V +N+ ISG G +A ++ SM + +R + + ++ + L
Sbjct: 249 RILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANL 308
Query: 352 GRSAKDAWYFFEKMNRKGVKWS----EEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFS 407
F E+++ VK+ + + A++ ++ + AL + E+ G
Sbjct: 309 -----KELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI---GCVG 360
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
N + + ++ F +++ EEA LF EMK K V+P T+++++ A + P V
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP-VISPSEVH--- 416
Query: 468 AEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSV 527
A++ + ++ T L+ AY + K+ + AA F + I +++A++ Y+
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEE-AAKVFSGIDDKDIV----AWSAMLAGYAQ 471
Query: 528 SGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK-LMMSEKVEGTKV 586
+G E A F + + GIKP+ T++++L+ + K + + +++ +
Sbjct: 472 TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLC 531
Query: 587 TFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
+ L+ +AK+G A +V K ++++N +++ YA+ GQ K + KEM
Sbjct: 532 VSSALLTMYAKKGNIESAEEVF----KRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 587
Query: 647 AALNLKPDSVTY 658
+K D VT+
Sbjct: 588 KKRKVKMDGVTF 599
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 145/349 (41%), Gaps = 54/349 (15%)
Query: 352 GRSAKDAWYFFEKMNRKGVKWSEEVLGAIVK---SFCAEGLVSRALIIQSEMEKKGVFSN 408
GR+ ++A F ++R G++ + +++K + C E L R L Q K G +
Sbjct: 72 GRT-QEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDE-LFGRQLHCQCI--KFGFLDD 127
Query: 409 AIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLA 468
V +L+D + K ++ ++ +F EMK +NV T+ L+ Y+R V L
Sbjct: 128 VSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV----VTWTTLISGYARNSMNDEVLTLFM 183
Query: 469 EMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVS 528
MQ+ G +P + ++ + ++ + + K G+ T +LI+ Y
Sbjct: 184 RMQNEGTQPNSFTFAAALGVLA-EEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 529 GWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAG-DTQTMMKIW-------------- 573
G KA + F+ + + S+ T+ +++ G+ G D + + +
Sbjct: 243 GNVRKARILFDKTEVK----SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSF 298
Query: 574 -----------KLMMSEKVEGTKVTFNILVD---------GFAKQGQYMEARDVISEFGK 613
+L +E++ + V + L D ++K ++A + E G
Sbjct: 299 ASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGC 358
Query: 614 IGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+G V+++ +++ + + + L EM ++P+ TYS ++
Sbjct: 359 VG---NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 122/297 (41%), Gaps = 16/297 (5%)
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
Y +L+ F + +EA+ LF+ + ++ + F+ ++ + L +
Sbjct: 61 YISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCI 120
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
G + T L+ Y + D F +MK+ + ++T LI Y+ + +
Sbjct: 121 KFGFLDDVSVGTSLVDTYMKGSNFKD-GRKVFDEMKERNVV----TWTTLISGYARNSMN 175
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
++ F MQ EG +P+ T+ L G +++ +++ ++ T N L
Sbjct: 176 DEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSL 235
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
++ + K G +AR + F K + +V+T+N +++ YA G + + M +
Sbjct: 236 INLYLKCGNVRKARIL---FDKTEV-KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 652 KPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVD-------SYQKLRAILD 701
+ +++++I H ++K G + D + +Y K A+LD
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 137/314 (43%), Gaps = 21/314 (6%)
Query: 252 LYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAIS 311
L FF W+ C + LL + L R + + ++V + A+I+
Sbjct: 111 LEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNV-VTTASIT 169
Query: 312 GLLCC----GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNR 367
L+ C G ++A + M++ + +PD + ++ + ++G + K A + ++M
Sbjct: 170 CLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVG-NFKKARFLLDQMQL 228
Query: 368 KGVKWSEEVLG--AIVKSFCAEGLVS-----------RALIIQSEMEKKGVFSNAIVYNT 414
G ++ + ++ S+C G+ + A + EM +G + + YN
Sbjct: 229 PGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNC 288
Query: 415 LMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIG 474
L+D CK+N + A LF +MK K P T+N + YS + + ++ M+ +G
Sbjct: 289 LIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG 348
Query: 475 LK-PTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEK 533
P +++YT LI A ++ ++ A D ++M + G+ P ++Y + A S G
Sbjct: 349 HGVPGSSTYTPLIHALVETRRAAE-ARDLVVEMVEAGLVPREYTYKLVCDALSSEGLAST 407
Query: 534 AYVAFENMQREGIK 547
REGI+
Sbjct: 408 LDEELHKRMREGIQ 421
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 18/256 (7%)
Query: 403 KGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKI 462
K V + A + LM + V+EA F MK + KP +N +++A R K
Sbjct: 160 KNVVTTASI-TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKK 218
Query: 463 VENLLAEMQDIGLK--PTANSYTCLISAYGR-----------QKKMSDMAADAFLKMKKV 509
LL +MQ G + P +YT LIS+Y R +++M + A F +M
Sbjct: 219 ARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWE-ANRMFREMLFR 277
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
G P +Y LI + +A FE+M+ +G P+ TY + + + + +
Sbjct: 278 GFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGA 337
Query: 570 MKIWKLM--MSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLM 627
+++ + M + V G+ T+ L+ + + EARD++ E + GL P TY ++
Sbjct: 338 IEMMRTMKKLGHGVPGSS-TYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVC 396
Query: 628 NAYARGGQHSKLPQLL 643
+A + G S L + L
Sbjct: 397 DALSSEGLASTLDEEL 412
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 15/224 (6%)
Query: 478 TANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVA 537
T S TCL+ G + + + A F +MK+ KP ++Y +I+A G +KA
Sbjct: 164 TTASITCLMKCLGEEGFVKEALA-TFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFL 222
Query: 538 FENMQREGIK--PSIETYTTLLDGFRRAGDTQTMMK-----------IWKLMMSEKVEGT 584
+ MQ G + P TYT L+ + R G K +++ M+
Sbjct: 223 LDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPD 282
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
VT+N L+DG K + A ++ + G P +TYN + Y+ + ++++
Sbjct: 283 VVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMR 342
Query: 645 EMAALNLK-PDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQV 687
M L P S TY+ +I+ +M+++G V
Sbjct: 343 TMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLV 386
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
FNIL+ A S+R + LL +M+D GLKP + ++ A + + + A F M
Sbjct: 426 FNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETT-AAIQIFKAM 484
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL---LDGFRRA 563
G KPT SY AL+ A +++A+ + +M + GI+P++ YTT+ L G ++
Sbjct: 485 VDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKF 544
Query: 564 GDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTY 623
T++K M S+ +E + VTFN ++ G A+ G A + + P +TY
Sbjct: 545 NLLDTLLK---EMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITY 601
Query: 624 NMLMNAYARGGQHSKLPQLLKEM 646
ML+ A A + P+L E+
Sbjct: 602 EMLIEALANDAK----PRLAYEL 620
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 1/189 (0%)
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
+N L+ A K L +M+ K +KP +N ++ A S+ + + M
Sbjct: 426 FNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMV 485
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
D G KPT SY L+SA + K+ D A + M KVGI+P ++YT + +
Sbjct: 486 DNGEKPTVISYGALLSAL-EKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKF 544
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
+ M +GI+PS+ T+ ++ G R G + + + M SE VE ++T+ +L
Sbjct: 545 NLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEML 604
Query: 592 VDGFAKQGQ 600
++ A +
Sbjct: 605 IEALANDAK 613
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/452 (18%), Positives = 177/452 (39%), Gaps = 33/452 (7%)
Query: 242 LGKERLLVCCLYFFQWMR---AQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSK 298
GK++ L + W++ ++ ++ P L G G+ +L +++
Sbjct: 156 FGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFGEAEKIL-KDMEEEG 214
Query: 299 KFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDA 358
++ YN + + G + A + + ++ P+ +T S + V R++ A
Sbjct: 215 IVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVYRRM-EDGMGA 273
Query: 359 WYFFEKMNRK----------GVKWS------EEVLGAIVKSFCAEGLV------SRALII 396
FF ++ K G W E +G I LV +R L +
Sbjct: 274 LEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKL 333
Query: 397 QSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR 456
+ M+ GV + + L+ A + H + L+ ++ + + + + N L+ +
Sbjct: 334 LNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGK 393
Query: 457 RMQPKIVENLLAEMQDIGLKPTANSYTCLISAY------GRQKKMSDMAADAFLKMKKVG 510
+ + ++ D G +P SY ++S + ++ + KM+ G
Sbjct: 394 AKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKG 453
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
+KP + A++ A S + A F+ M G KP++ +Y LL +
Sbjct: 454 LKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAF 513
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAY 630
++W M+ +E + + Q ++ ++ E G+ P+V+T+N +++
Sbjct: 514 RVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGC 573
Query: 631 ARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
AR G + M + N++P+ +TY +I
Sbjct: 574 ARNGLSGVAYEWFHRMKSENVEPNEITYEMLI 605
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 7/251 (2%)
Query: 322 AWKVYESMEKDNIRPDHVTCSIMVTVMRKL--GRSAKDAWYF----FEKMNRKGVKWSEE 375
A ++YE + + P++++ ++V+ L S + W + KM KG+K
Sbjct: 400 ALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRR 459
Query: 376 VLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM 435
A++ + + A+ I M G I Y L+ A K +EA ++ M
Sbjct: 460 HWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHM 519
Query: 436 KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
++P + + + + + +++ LL EM G++P+ ++ +IS R +
Sbjct: 520 IKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNG-L 578
Query: 496 SDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTT 555
S +A + F +MK ++P +Y LI A + AY Q EG+K S + Y
Sbjct: 579 SGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDA 638
Query: 556 LLDGFRRAGDT 566
++ G T
Sbjct: 639 VVKSAETYGAT 649
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 127/320 (39%), Gaps = 10/320 (3%)
Query: 217 LTLEEALAQYGERVSEKECWEVLEVLGKERLLVCCLYFFQWMRAQEPSLVTPRACTVLFP 276
L L A+ G R S +E ++ +E + ++ +R + S ++ C L
Sbjct: 331 LKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIR-ERFSEISLSVCNHLIW 389
Query: 277 LLGRAGMGDKLMVLFRNL------PSSKKFR-DVHIYNAAISGLLCCGRYEDAWKVYESM 329
L+G+A + ++ +L P++ + V +N +S G + ++ M
Sbjct: 390 LMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKM 449
Query: 330 EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGL 389
E ++P + ++ K + A F+ M G K + GA++ + L
Sbjct: 450 EDKGLKPQRRHWNAVLVACSKASETTA-AIQIFKAMVDNGEKPTVISYGALLSALEKGKL 508
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
A + + M K G+ N Y T+ + L EM +K ++P+ TFN
Sbjct: 509 YDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNA 568
Query: 450 LMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
++ +R + M+ ++P +Y LI A K +A + +K +
Sbjct: 569 VISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAK-PRLAYELHVKAQNE 627
Query: 510 GIKPTSHSYTALIHAYSVSG 529
G+K +S Y A++ + G
Sbjct: 628 GLKLSSKPYDAVVKSAETYG 647
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 14/177 (7%)
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
YN ++ CK+ +EA +F + ++P T+N+++ R E L AEM
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
GL P +Y +I +Q K++ + +KV + ++ LI+ Y +
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLA--------QARKV--SKSCSTFNTLINGYCKATRV 122
Query: 532 EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTF 588
+ F M R GI ++ TYTTL+ GFR+ GD T + I++ M+S V + +TF
Sbjct: 123 KDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 497 DMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
D A + F + G++P +Y +I +S G EK Y M R G+ P TY ++
Sbjct: 31 DEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGRAEKLYAE---MIRRGLVPDTITYNSM 86
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
+ G + K KL + KV + TFN L++G+ K + + ++ E + G+
Sbjct: 87 IHG---------LCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGI 137
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
V+TY L++ + + G + + +EM + + S+T+ ++
Sbjct: 138 VANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
+F+ + S D YN I GL G++++A ++ ++ ++PD T ++M+
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
LGR+ K + +M R+G+ +++ C + +++A + V +
Sbjct: 60 SLGRAEK----LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSC 106
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
+NTL++ +CK+ V++ LF EM + + T+ L+H + + ++ E
Sbjct: 107 STFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQE 166
Query: 470 MQDIGLKPTANSY 482
M G+ ++ ++
Sbjct: 167 MVSNGVYSSSITF 179
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 80/183 (43%), Gaps = 13/183 (7%)
Query: 503 FLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR 562
F M++ + + Y +IH +G ++A F N+ G++P ++TY ++ F
Sbjct: 2 FKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSS 60
Query: 563 AGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMT 622
G + K++ M+ + +T+N ++ G KQ + +AR V + T
Sbjct: 61 LGRAE---KLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCST 108
Query: 623 YNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMI 682
+N L+N Y + + L EM + + +TY+T+I+ ++M+
Sbjct: 109 FNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Query: 683 KSG 685
+G
Sbjct: 169 SNG 171
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 572 IWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYA 631
++K+M ++ +NI++ G K G++ EA ++ + GL P V TYNM++ +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS 60
Query: 632 RGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
G + +L EM L PD++TY++MI+
Sbjct: 61 LG----RAEKLYAEMIRRGLVPDTITYNSMIH 88
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 179/419 (42%), Gaps = 64/419 (15%)
Query: 280 RAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHV 339
RAG D+ L+ P KFRD N +SG L G++ +A +V++ M + V
Sbjct: 156 RAGRFDEAEFLYAETPV--KFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEV----V 209
Query: 340 TCSIMVTVMRKLGRSAKDAWYFFEKMNRKGV-KWSEEVLGAIVKSFCAEGLVSRALIIQS 398
+CS MV K+GR DA F++M + V W+ + G F +G L ++
Sbjct: 210 SCSSMVHGYCKMGRIV-DARSLFDRMTERNVITWTAMIDGYFKAGFFEDGF-GLFLRMRQ 267
Query: 399 EMEKKGVFSNAIVY---------------------------------NTLMDAFCKSNHV 425
E + K V SN + N+LM + K ++
Sbjct: 268 EGDVK-VNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYM 326
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
EA+ +F MK K+ + ++N L+ +R Q L +M + S+T +
Sbjct: 327 GEAKAVFGVMKNKD----SVSWNSLITGLVQRKQISEAYELFEKMPGKDMV----SWTDM 378
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSH--SYTALIHAYSVSGWHEKAYVAFENMQR 543
I + + ++S ++ G+ P ++TA+I A+ +G++E+A F M +
Sbjct: 379 IKGFSGKGEISKC-------VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQ 431
Query: 544 EGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYME 603
+ + P+ T++++L D ++I ++ + N LV + K G +
Sbjct: 432 KEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTND 491
Query: 604 ARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
A + S + P +++YN +++ Y+ G K +L + + +P+ VT+ ++
Sbjct: 492 AYKIFSCISE----PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALL 546
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 147/333 (44%), Gaps = 42/333 (12%)
Query: 337 DHVTCSIMVT--VMRKLGRSAKDAWYFFEKMNRKG-VKWSEEVLGAIVKSFCAEGLVSRA 393
D V+ + ++T V RK +A+ FEKM K V W++ ++K F +G +S+
Sbjct: 340 DSVSWNSLITGLVQRK---QISEAYELFEKMPGKDMVSWTD-----MIKGFSGKGEISKC 391
Query: 394 LIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHA 453
+ + M +K + I + ++ AF + + EEA F +M K V P + TF+ ++ A
Sbjct: 392 VELFGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Query: 454 YSRRMQPKIVENL-----LAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK 508
+ ++E L + +M + NS L+S Y + +D K+
Sbjct: 448 TAS--LADLIEGLQIHGRVVKMNIVNDLSVQNS---LVSMYCKCGNTNDA-----YKIFS 497
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
+P SY +I YS +G+ +KA F ++ G +P+ T+ LL G
Sbjct: 498 CISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDL 557
Query: 569 MMKIWKLMMSE-KVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLM 627
K +K M S +E + +VD + G +A ++IS + P + L+
Sbjct: 558 GWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLIS---TMPCKPHSGVWGSLL 614
Query: 628 NAYARGGQHSKLPQLLKEMAA---LNLKPDSVT 657
+A + L L E+AA + L+PDS T
Sbjct: 615 SA-----SKTHLRVDLAELAAKKLIELEPDSAT 642
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 161/357 (45%), Gaps = 32/357 (8%)
Query: 307 NAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMN 366
N+ IS G ++A ++ M +I V+ M++ + G+ +K AW F++M
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSI----VSWIAMISAYAENGKMSK-AWQVFDEMP 108
Query: 367 RKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVE 426
+ ++ A++K+ C G +A + ++ +K NA+ Y T++ F ++ +
Sbjct: 109 VRVTTSYNAMITAMIKNKCDLG---KAYELFCDIPEK----NAVSYATMITGFVRAGRFD 161
Query: 427 EAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLI 486
EAE L+ E K A+ N+L+ Y R + + Q + +K S + ++
Sbjct: 162 EAEFLYAETPVKFRDSVAS--NVLLSGYLRAGK---WNEAVRVFQGMAVKEVV-SCSSMV 215
Query: 487 SAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG- 545
Y + ++ D A F +M + + ++TA+I Y +G+ E + F M++EG
Sbjct: 216 HGYCKMGRIVD-ARSLFDRMTERNVI----TWTAMIDGYFKAGFFEDGFGLFLRMRQEGD 270
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
+K + T + R + +I L+ +E N L+ ++K G EA+
Sbjct: 271 VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAK 330
Query: 606 DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
V FG + +V ++N L+ + Q S+ +L ++M D V+++ MI
Sbjct: 331 AV---FGVMKNKDSV-SWNSLITGLVQRKQISEAYELFEKMPG----KDMVSWTDMI 379
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 186/444 (41%), Gaps = 60/444 (13%)
Query: 252 LYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRN---LPSSKKFRD-VHIYN 307
L F WM + L ++L P+ G K + + RN L K+ D + + N
Sbjct: 203 LMMFDWMVNESVDLDHATIVSML-PVCGHL----KDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 308 AAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNR 367
A ++ L CGR ++A V++ ME R D +T + M+ + G ++A M
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRME----RRDVITWTCMINGYTEDG-DVENALELCRLMQF 312
Query: 368 KGVKWSEEVLGAIVKSFCAEGL-VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVE 426
+GV+ + + ++V S C + L V+ + ++ V+S+ I+ +L+ + K V+
Sbjct: 313 EGVRPNAVTIASLV-SVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVD 371
Query: 427 -------------------------------EAEGLFVEMKAKNVKPTAATFNILMHAYS 455
+A GLF M+ ++V+P AT N L+ AY+
Sbjct: 372 LCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYA 431
Query: 456 RRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTS 515
+ N+ + G + ++ T L+ Y + + + A F +++
Sbjct: 432 ALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTL-ESAHKIFNGIQEKHKSKDV 490
Query: 516 HSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKL 575
+ ALI Y + G A F M R G+ P+ T+T+ L+ +G + + +++
Sbjct: 491 VLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRF 550
Query: 576 MMSE-KVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGG 634
M+ K + +VD + G+ EA ++I+ I PT + L+ A
Sbjct: 551 MLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLIT---TIPFEPTSTVWGALLAACV--- 604
Query: 635 QHSKLPQLLKEMAA---LNLKPDS 655
H + L EMAA L+P++
Sbjct: 605 THENVQ--LGEMAANKLFELEPEN 626
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 154/391 (39%), Gaps = 50/391 (12%)
Query: 292 RNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKL 351
R++ K RDV +N ISG G DA +++ M +++ DH T M+ V L
Sbjct: 172 RDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHL 231
Query: 352 -----GRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVF 406
GR+ + R G K EV A+V + G + A + ME++ V
Sbjct: 232 KDLEMGRNVHK----LVEEKRLGDKI--EVKNALVNMYLKCGRMDEARFVFDRMERRDV- 284
Query: 407 SNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL---------------M 451
I + +++ + + VE A L M+ + V+P A T L +
Sbjct: 285 ---ITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL 341
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI 511
H ++ R Q + +++ E T LIS Y + K++ D+ F K
Sbjct: 342 HGWAVRQQ--VYSDIIIE-------------TSLISMYAKCKRV-DLCFRVFSGASKYHT 385
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMK 571
P S + VS A F+ M+RE ++P+I T +LL + D + M
Sbjct: 386 GPWSAIIAGCVQNELVS----DALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMN 441
Query: 572 IWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYA 631
I + + LV ++K G A + + + V+ + L++ Y
Sbjct: 442 IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYG 501
Query: 632 RGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
G Q+ EM + P+ +T+++ +
Sbjct: 502 MHGDGHNALQVFMEMVRSGVTPNEITFTSAL 532
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 134/291 (46%), Gaps = 2/291 (0%)
Query: 310 ISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKG 369
++ L G++ +A + + + NI D V + ++ M + G+ + A +E+M+ G
Sbjct: 746 VNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGK-LQCASEIYERMHTSG 804
Query: 370 VKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAE 429
V S + ++ + + +A+ I S + G++ + +Y ++ + K + EA
Sbjct: 805 VPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEAL 864
Query: 430 GLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY 489
LF EM+ K +KP ++N+++ + V+ LL M+ G ++Y LI Y
Sbjct: 865 SLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVY 924
Query: 490 GRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPS 549
+ ++ A +K+ GI + +++L+ A +G E+A + M GI P
Sbjct: 925 AESSQFAE-AEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPD 983
Query: 550 IETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
T+L G+ GD + + ++ M+ VE + +++ D + G+
Sbjct: 984 SACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVVEDLYKAVGK 1034
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/465 (21%), Positives = 191/465 (41%), Gaps = 71/465 (15%)
Query: 299 KFRDVHIYN-AAISGLLCCGRYED---AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRS 354
K RD+ + A I L C + ++ A + + ++ K + PD +C+ M+ + +L
Sbjct: 460 KTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLG 518
Query: 355 AKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNT 414
K A F +++ V + E+ ++ +C EG+V+ A + +M ++ + T
Sbjct: 519 EK-AKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQT 577
Query: 415 LMDAFCKSNHVEEAE-------------GLFVEMKAK--NVKPTAATFNILMH------A 453
L ++ N ++ E GL + ++ K N+ T A N++ A
Sbjct: 578 LAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSA 637
Query: 454 YSRRMQPKIVENLLAEMQDI-------GLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
+R + + E +++ + I GL+ + LI+ YGRQ K+ + A +L
Sbjct: 638 VNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKE-AKRLYLAA 696
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF---------------------------- 538
+ P ++I AY GW E AY F
Sbjct: 697 GESKT-PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKH 755
Query: 539 ---ENMQREGIKPSIE----TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNIL 591
E++ R ++ +IE Y TL+ AG Q +I++ M + V + T+N +
Sbjct: 756 REAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTM 815
Query: 592 VDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNL 651
+ + + Q +A ++ S + GL+ Y ++ Y +GG+ S+ L EM +
Sbjct: 816 ISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGI 875
Query: 652 KPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSYQKL 696
KP + +Y+ M+ + M ++G+ D+ +Y L
Sbjct: 876 KPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTL 920
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 126/306 (41%), Gaps = 1/306 (0%)
Query: 356 KDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
+DA+ F + KG + +V + G A I +K + + + YNTL
Sbjct: 721 EDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTL 780
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGL 475
+ A ++ ++ A ++ M V + T+N ++ Y R +Q + + + GL
Sbjct: 781 IKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGL 840
Query: 476 KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
YT +I YG+ KMS+ A F +M+K GIKP + SY ++ + S H +
Sbjct: 841 YLDEKIYTNMIMHYGKGGKMSE-ALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVD 899
Query: 536 VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGF 595
+ M+R G + TY TL+ + + K L+ + + + F+ L+
Sbjct: 900 ELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSAL 959
Query: 596 AKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDS 655
K G EA + + G+ P ++ Y G K ++M +++ D
Sbjct: 960 VKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDR 1019
Query: 656 VTYSTM 661
S +
Sbjct: 1020 FVSSVV 1025
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 1/190 (0%)
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHE 532
+ +P+ YT ++ YG+ K+ MA + FL+M +VG +P + + ++ Y+ G H
Sbjct: 182 LSYRPSVVVYTIVLRLYGQVGKIK-MAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHS 240
Query: 533 KAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILV 592
++ +Q I S Y +L ++ ++ +W M+ E V + T+ ++V
Sbjct: 241 AMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVV 300
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLK 652
+AKQG EA E +G P +TY+ +++ + G K L ++M + +
Sbjct: 301 SSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIV 360
Query: 653 PDSVTYSTMI 662
P + T +TM+
Sbjct: 361 PSNYTCATML 370
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 48/258 (18%)
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM 470
V +++DA+ + +E+A GLF+E K P A T +IL++A + R + + E++
Sbjct: 706 VIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI---- 761
Query: 471 QDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGW 530
S TCL + +++ VG Y LI A +G
Sbjct: 762 ----------SRTCL---------------EKNIELDTVG-------YNTLIKAMLEAGK 789
Query: 531 HEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK------LMMSEKVEGT 584
+ A +E M G+ SI+TY T++ + R ++I+ L + EK+
Sbjct: 790 LQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKI--- 846
Query: 585 KVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLK 644
+ ++ + K G+ EA + SE K G+ P +YNM++ A H ++ +LL+
Sbjct: 847 ---YTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQ 903
Query: 645 EMAALNLKPDSVTYSTMI 662
M D TY T+I
Sbjct: 904 AMERNGRCTDLSTYLTLI 921
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 118/254 (46%), Gaps = 1/254 (0%)
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLL 467
+ +VY ++ + + ++ AE F+EM +P A ++ Y+R + +
Sbjct: 187 SVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFY 246
Query: 468 AEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSV 527
+Q+ + + + Y ++S+ ++K D +L+M + G+ P +YT ++ +Y+
Sbjct: 247 KAVQERRILLSTSVYNFMLSSL-QKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 528 SGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVT 587
G+ E+A AF M+ G P TY++++ +AGD + + +++ M S+ + + T
Sbjct: 306 QGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYT 365
Query: 588 FNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMA 647
++ + K Y +A + ++ + + + +++ Y + G + +E
Sbjct: 366 CATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETE 425
Query: 648 ALNLKPDSVTYSTM 661
LNL D TY M
Sbjct: 426 RLNLLADEKTYLAM 439
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 121/264 (45%), Gaps = 1/264 (0%)
Query: 399 EMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRM 458
EM + G +A+ T++ + + + ++ + + + + +N ++ + ++
Sbjct: 213 EMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKS 272
Query: 459 QPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSY 518
V +L EM + G+ P +YT ++S+Y +Q + A AF +MK +G P +Y
Sbjct: 273 FHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQG-FKEEALKAFGEMKSLGFVPEEVTY 331
Query: 519 TALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMS 578
+++I +G EKA +E+M+ +GI PS T T+L + + + + ++ M
Sbjct: 332 SSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMER 391
Query: 579 EKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSK 638
K+ +V +++ + K G + +A+ + E ++ L TY + + G K
Sbjct: 392 NKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVK 451
Query: 639 LPQLLKEMAALNLKPDSVTYSTMI 662
+++ M ++ Y M+
Sbjct: 452 ALDVIEMMKTRDIPLSRFAYIVML 475
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 160/404 (39%), Gaps = 56/404 (13%)
Query: 254 FFQWMRAQ---EPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAI 310
FF WM+ Q PS+V L+ +G+ M ++ + + +A
Sbjct: 174 FFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEP--------DAVA 225
Query: 311 SGLLCC-----GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAK--DAWYFFE 363
G + C GR+ Y+++++ I + M++ ++K K D W
Sbjct: 226 CGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWL--- 282
Query: 364 KMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSN 423
+M +GV +E +V S+ +G AL EM+ G + Y++++ K+
Sbjct: 283 EMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAG 342
Query: 424 HVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYT 483
E+A GL+ +M+++ + P+ T ++ Y + +L A+M+ +
Sbjct: 343 DWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRG 402
Query: 484 CLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQR 543
+I YG+ D A F + +++ + +Y A+ + SG KA E M+
Sbjct: 403 LIIRIYGKLGLFHD-AQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKT 461
Query: 544 EGIKPSIETYTTLLD---------------------GFRRAGDTQTMMKIW-KLMMSEKV 581
I S Y +L G A M+ ++ +L + EK
Sbjct: 462 RDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKA 521
Query: 582 EG-------TKVTFNI-----LVDGFAKQGQYMEARDVISEFGK 613
+G +V F+I + + K+G EA+D+I + G+
Sbjct: 522 KGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGR 565
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Query: 501 DAFLKMK-KVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
D F MK ++ +P+ YT ++ Y G + A F M G +P T+L
Sbjct: 173 DFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCT 232
Query: 560 FRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPT 619
+ R G M+ +K + ++ + +N ++ K+ + + D+ E + G+ P
Sbjct: 233 YARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPN 292
Query: 620 VMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
TY +++++YA+ G + + EM +L P+ VTYS++I
Sbjct: 293 EFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVI 335
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 167/368 (45%), Gaps = 29/368 (7%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D + N+ ISG G ++ A ++++ E ++ VT + M+ + G SA +A +
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDV----VTWTAMIDGFVRNG-SASEAMVY 191
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQS----EMEKKGVFSNAIVYNTLMD 417
F +M + GV +E + +++K A G V +S +E V + + ++L+D
Sbjct: 192 FVEMKKTGVAANEMTVVSVLK---AAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVD 248
Query: 418 AFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAY--SRRMQPKIVENLLAEMQDIGL 475
+ K + ++A+ +F EM ++NV T+ L+ Y SR ++ + EM +
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRNV----VTWTALIAGYVQSRCFDKGML--VFEEMLKSDV 302
Query: 476 KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
P + + ++SA + M K I+ + + T LI Y G E+A
Sbjct: 303 APNEKTLSSVLSACAHVGALH-RGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAI 361
Query: 536 VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGF 595
+ FE + + ++ T+T +++GF G + ++ M+S V +VTF ++
Sbjct: 362 LVFERLHEK----NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSAC 417
Query: 596 AKQGQYMEARDV-ISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
A G E R + +S G+ + P Y +++ + R G + L++ M ++P
Sbjct: 418 AHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMP---MEPT 474
Query: 655 SVTYSTMI 662
+V + +
Sbjct: 475 NVVWGALF 482
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 136/339 (40%), Gaps = 18/339 (5%)
Query: 326 YESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFC 385
Y M ++ + P T ++ + KL S + + F + + G+ V +++ +
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKLRDS--NPFQFHAHIVKFGLDSDPFVRNSLISGYS 149
Query: 386 AEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAA 445
+ GL A + E K V + + ++D F ++ EA FVEMK V
Sbjct: 150 SSGLFDFASRLFDGAEDKDV----VTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEM 205
Query: 446 TFNILMHAYSRRMQPKIVENLLAEMQDIG-LKPTANSYTCLISAYGRQKKMSDMAADAFL 504
T ++ A + + ++ + G +K + L+ YG+ D A F
Sbjct: 206 TVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDD-AQKVFD 264
Query: 505 KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAG 564
+M + ++TALI Y S +K + FE M + + P+ +T +++L G
Sbjct: 265 EMPSRNVV----TWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVG 320
Query: 565 DTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP-TVMTY 623
++ M+ +E L+D + K G EA V LH V T+
Sbjct: 321 ALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFER-----LHEKNVYTW 375
Query: 624 NMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
++N +A G L M + ++ P+ VT+ ++
Sbjct: 376 TAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVL 414
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 113/253 (44%), Gaps = 20/253 (7%)
Query: 274 LFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDN 333
L + G+ D +F +PS R+V + A I+G + ++ V+E M K +
Sbjct: 246 LVDMYGKCSCYDDAQKVFDEMPS----RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD 301
Query: 334 IRPDHVTCSIMVTVMRKLG---RSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLV 390
+ P+ T S +++ +G R + Y M + ++ + ++ + G +
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVHCY----MIKNSIEINTTAGTTLIDLYVKCGCL 357
Query: 391 SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
A+++ + +K V++ + +++ F + +A LF M + +V P TF +
Sbjct: 358 EEAILVFERLHEKNVYT----WTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAV 413
Query: 451 MHAYSRRMQPKIVENLLAEMQD-IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV 509
+ A + + L M+ ++P A+ Y C++ +GR+ + + A ++++
Sbjct: 414 LSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKA----LIERM 469
Query: 510 GIKPTSHSYTALI 522
++PT+ + AL
Sbjct: 470 PMEPTNVVWGALF 482
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 164/382 (42%), Gaps = 36/382 (9%)
Query: 292 RNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKL 351
R L SS + +DV ++ + +SG + R ++A + M ++P++ T S ++++ +
Sbjct: 280 RVLNSSGE-QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAV 338
Query: 352 GRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSF--CAEGLVSRALIIQSEMEKKGVFS-- 407
RS + + G + S +V A+V + C+ SE+E VF
Sbjct: 339 -RSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCS----------ASEVEASRVFGAM 387
Query: 408 ---NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR----RMQP 460
N + + TL+ V++ GL +EM + V+P T + ++ A S+ R
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL 447
Query: 461 KIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTA 520
+I LL D G NS L+ AY +K+ D A + MK+ + +YT+
Sbjct: 448 EIHAYLLRRHVD-GEMVVGNS---LVDAYASSRKV-DYAWNVIRSMKR----RDNITYTS 498
Query: 521 LIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEK 580
L+ ++ G HE A M +GI+ + + G +T + +
Sbjct: 499 LVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSG 558
Query: 581 VEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLP 640
G N LVD ++K G +A+ V E P V+++N L++ A G S
Sbjct: 559 FSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT----PDVVSWNGLVSGLASNGFISSAL 614
Query: 641 QLLKEMAALNLKPDSVTYSTMI 662
+EM +PDSVT+ ++
Sbjct: 615 SAFEEMRMKETEPDSVTFLILL 636
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/423 (18%), Positives = 175/423 (41%), Gaps = 50/423 (11%)
Query: 316 CGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSE- 374
CG++++A +++ S++ D ++ ++M++ + R ++A F+ +M + GV +E
Sbjct: 172 CGQFKEACELFSSLQN----ADTISWTMMISSLVG-ARKWREALQFYSEMVKAGVPPNEF 226
Query: 375 ---EVLGA-----------IVKSFCAEGLVSRALIIQSEMEKKGVFS------------- 407
++LGA I + G+ ++ S ++ FS
Sbjct: 227 TFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSG 286
Query: 408 --NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVEN 465
+ ++ +++ F ++ +EA G F+EM++ ++P T++ ++ S +
Sbjct: 287 EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQ 346
Query: 466 LLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAY 525
+ ++ +G + + + L+ Y + A+ F M + P S+T LI
Sbjct: 347 IHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM----VSPNVVSWTTLILGL 402
Query: 526 SVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK 585
G+ + + M + ++P++ T + +L + + +++I ++ V+G
Sbjct: 403 VDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEM 462
Query: 586 VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 645
V N LVD +A + A +VI + +TY L+ + G+H ++
Sbjct: 463 VVGNSLVDAYASSRKVDYAWNVIRSMKR----RDNITYTSLVTRFNELGKHEMALSVINY 518
Query: 646 MAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSG-----QVMD--VDSYQKLRA 698
M ++ D ++ I H +KSG V++ VD Y K +
Sbjct: 519 MYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGS 578
Query: 699 ILD 701
+ D
Sbjct: 579 LED 581
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 132/342 (38%), Gaps = 34/342 (9%)
Query: 293 NLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLG 352
N+ S K RD Y + ++ G++E A V M D IR D ++ ++ LG
Sbjct: 483 NVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG 542
Query: 353 RSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVY 412
+ + + + G + VL ++V + G + A + E+ V S +
Sbjct: 543 -ALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVS----W 597
Query: 413 NTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQD 472
N L+ + + A F EM+ K +P + TF IL+ A S + M+
Sbjct: 598 NGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKK 657
Query: 473 I-GLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
I ++P Y L+ GR ++ + ++ + +KP + + L+ A G
Sbjct: 658 IYNIEPQVEHYVHLVGILGRAGRLEEATG----VVETMHLKPNAMIFKTLLRACRYRGNL 713
Query: 532 EKAYVAFENMQREGI-----KPSIETYTTLLDGFRRAGDTQTMMKIWKLM----MSEKVE 582
E+M +G+ P++ Y L D + +G + K LM +S+K+
Sbjct: 714 SLG----EDMANKGLALAPSDPAL--YILLADLYDESGKPELAQKTRNLMTEKRLSKKLG 767
Query: 583 GTKVTFNILVDGFAKQ---------GQYMEARDVISEFGKIG 615
+ V V F + G Y E + E + G
Sbjct: 768 KSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFG 809
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 27/195 (13%)
Query: 399 EMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRM 458
EM ++G+ N + Y TL+ ++ + A+ +F EM + V P T+NIL+ +
Sbjct: 6 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCK-- 63
Query: 459 QPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSY 518
K+ + L+A K+ D D F + G+KP +Y
Sbjct: 64 NGKLEKALVA------------------------GKVED-GWDLFCSLSLKGVKPNVVTY 98
Query: 519 TALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMS 578
T +I + G+ E+AY F M+ +G P TY TL+ R GD ++ K M S
Sbjct: 99 TTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 158
Query: 579 EKVEGTKVTFNILVD 593
+ G T+ ++ D
Sbjct: 159 CRFAGDASTYGLVTD 173
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 503 FLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRR 562
F +M + G+ + +YT LI +G + A F+ M +G+ P I TY LLDG +
Sbjct: 4 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCK 63
Query: 563 AGDTQTMM------KIWKLMMSEKVEGTK---VTFNILVDGFAKQGQYMEARDVISEFGK 613
G + + W L S ++G K VT+ ++ GF K+G EA + + +
Sbjct: 64 NGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKE 123
Query: 614 IGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
G P TYN L+ A+ R G + +L+KEM + D+ TY
Sbjct: 124 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 169
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 538 FENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAK 597
F M + G+ + TYTTL+ G +AGD +I+K M+S+ V +T+NIL+DG K
Sbjct: 4 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCK 63
Query: 598 QGQYMEAR---------DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA 648
G+ +A D+ G+ P V+TY +++ + + G + L ++M
Sbjct: 64 NGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKE 123
Query: 649 LNLKPDSVTYSTMI 662
PDS TY+T+I
Sbjct: 124 DGPLPDSGTYNTLI 137
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 78/203 (38%), Gaps = 43/203 (21%)
Query: 288 MVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTV 347
M LFR + + Y I GL G + A ++++ M D + PD +T +I++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 348 MRKLGRSAK--------DAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSE 399
+ K G+ K D W F ++ KGVK
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVK---------------------------- 92
Query: 400 MEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQ 459
N + Y T++ FCK EEA LF +MK P + T+N L+ A+ R
Sbjct: 93 -------PNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGD 145
Query: 460 PKIVENLLAEMQDIGLKPTANSY 482
L+ EM+ A++Y
Sbjct: 146 KAASAELIKEMRSCRFAGDASTY 168
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
F +M+++G+ + +++ G A I EM GV + + YN L+D C
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 421 KSNHVEEA-------EG--LFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
K+ +E+A +G LF + K VKP T+ ++ + ++ + L +M+
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFL 504
+ G P + +Y LI A+ R D AA A L
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRD---GDKAASAEL 152
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
M++++ M + G VT+ L+ G + G A+++ E G+ P +MTYN+L++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 630 YARGGQHSKLP---------QLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQ 680
+ G+ K L ++ +KP+ VTY+TMI ++
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 681 MIKSGQVMDVDSYQKL 696
M + G + D +Y L
Sbjct: 121 MKEDGPLPDSGTYNTL 136
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 145/318 (45%), Gaps = 20/318 (6%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T L R G + LF +LP+ +D+ + A ++G + ++A + ++ MEK
Sbjct: 219 TELIAAYARVGNMECAAELFESLPT----KDMVAWTAMVTGFAQNAKPQEALEYFDRMEK 274
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL--GAIVKSFCAEGL 389
IR D VT + ++ +LG S K A + + G S+ V+ A++ + G
Sbjct: 275 SGIRADEVTVAGYISACAQLGAS-KYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGN 333
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN-VKPTAATFN 448
V A+ + M K VF+ Y++++ +EA LF M + +KP TF
Sbjct: 334 VEEAVNVFMSMNNKNVFT----YSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFV 389
Query: 449 ILMHAYSRRMQPKIVENLLAEM-QDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMK 507
+ A S + M Q G++PT + YTC++ GR ++ +A +K
Sbjct: 390 GALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQ----EALELIK 445
Query: 508 KVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPS-IETYTTLLDGFRRAGDT 566
+ ++P + AL+ A + E A +A E++ ++P I Y L + + AGD
Sbjct: 446 TMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFE--LEPDIIGNYILLSNVYASAGDW 503
Query: 567 QTMMKIWKLMMSEKVEGT 584
++++ KL+ + ++ T
Sbjct: 504 GGVLRVRKLIKEKGLKKT 521
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 153/353 (43%), Gaps = 18/353 (5%)
Query: 299 KFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDA 358
+FR+ ++ A I G G++++A +Y M K+ I P T S ++ +
Sbjct: 110 QFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGR 169
Query: 359 WYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDA 418
+ + +G + V ++ + + A + EM ++ V S + L+ A
Sbjct: 170 QFHAQTFRLRGFCFV-YVGNTMIDMYVKCESIDCARKVFDEMPERDVIS----WTELIAA 224
Query: 419 FCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPT 478
+ + ++E A LF + K++ + ++ +++ +P+ M+ G++
Sbjct: 225 YARVGNMECAAELFESLPTKDM----VAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRAD 280
Query: 479 ANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSY--TALIHAYSVSGWHEKAYV 536
+ ISA Q S A A +K G P+ H +ALI YS G E+A
Sbjct: 281 EVTVAGYISACA-QLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVN 339
Query: 537 AFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE-KVEGTKVTFNILVDGF 595
F +M + ++ TY++++ G G Q + ++ M+++ +++ VTF +
Sbjct: 340 VFMSMNNK----NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMAC 395
Query: 596 AKQGQYMEARDVI-SEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMA 647
+ G + R V S + G+ PT Y +++ R G+ + +L+K M+
Sbjct: 396 SHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMS 448
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 16/341 (4%)
Query: 324 KVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKS 383
K +S+E IRP+H T ++ K S + ++ + G+ + + +
Sbjct: 70 KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF 129
Query: 384 FCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPT 443
+ +G + A + EM ++ +F+ +N ++ N + E GLFV M ++NV P
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFT----WNKMIKELASRNLIGEVFGLFVRMVSENVTPN 185
Query: 444 AATFNILMHA-YSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADA 502
TF+ ++ A + +VE + A + GL+ + LI Y R D+A
Sbjct: 186 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNG-FVDLARRV 244
Query: 503 FLKMKKVGIKPTSHS-YTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFR 561
F G++ HS + A+I S + +A F +M GI P+ ++++L +
Sbjct: 245 F-----DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACK 299
Query: 562 RAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVM 621
+ + ++ L++ N LV + G + A + S + +
Sbjct: 300 KIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ----RDAV 355
Query: 622 TYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
TYN L+N ++ G K +L K M L+PDS T ++++
Sbjct: 356 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 46/264 (17%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
D+ NA ++ CG+ E+++ +E E D++ + +V+ ++ G + ++A
Sbjct: 625 DLPFQNALVTLYSRCGKIEESYLAFEQTEA----GDNIAWNALVSGFQQSGNN-EEALRV 679
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F +MNR+G+ + G+ VK+ + + + + + K G S V N L+ + K
Sbjct: 680 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAK 739
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ +AE F+E+ KN ++N +++AYS+
Sbjct: 740 CGSISDAEKQFLEVSTKN----EVSWNAIINAYSKH------------------------ 771
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
+G + A D+F +M ++P + ++ A S G +K FE+M
Sbjct: 772 ------GFGSE------ALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESM 819
Query: 542 QRE-GIKPSIETYTTLLDGFRRAG 564
E G+ P E Y ++D RAG
Sbjct: 820 NSEYGLSPKPEHYVCVVDMLTRAG 843
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/450 (19%), Positives = 167/450 (37%), Gaps = 88/450 (19%)
Query: 271 CTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESME 330
C L L G +F N+ RD YN I+GL CG E A ++++ M
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQ----RDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 331 KDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSF--CAEG 388
D + PD T + +V G + + G + ++ GA++ + CA+
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFR-GQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
+ +++E+E N +++N ++ A+ + + + +F +M+ + + P T+
Sbjct: 441 ETALDYFLETEVE------NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC--LISAYGR--------------- 491
++ R ++ E + +++ I N+Y C LI Y +
Sbjct: 495 SILKTCIRLGDLELGEQIHSQI--IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 552
Query: 492 ---------------QKKMSDMAADAFLKMKKVGIKPTSHSYT----------------- 519
Q D A F +M GI+ T
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 520 ------------------ALIHAYSVSGWHEKAYVAFENMQR-EGIKPSIETYTTLLDGF 560
AL+ YS G E++Y+AFE + + I + L+ GF
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI-----AWNALVSGF 667
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTV 620
+++G+ + ++++ M E ++ TF V ++ + + V + K G
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727
Query: 621 MTYNMLMNAYARGGQHSKLPQLLKEMAALN 650
N L++ YA+ G S + E++ N
Sbjct: 728 EVCNALISMYAKCGSISDAEKQFLEVSTKN 757
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 149/392 (38%), Gaps = 51/392 (13%)
Query: 271 CTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESME 330
C+VL + + G D + +DV + I+G + A + M
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAG----KDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 331 KDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLV 390
IR D V + V+ L ++ K+ + G A+V + G +
Sbjct: 584 DRGIRSDEVGLTNAVSACAGL-QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 642
Query: 391 SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
+ + + E + I +N L+ F +S + EEA +FV M + + TF
Sbjct: 643 EESYLAFEQTEA----GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSA 698
Query: 451 MHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVG 510
+ A S K + + A + G LIS Y + +SD A FL++
Sbjct: 699 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISD-AEKQFLEVST-- 755
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
S+ A+I+AYS G+ +A +F+ M ++P+ T +L G
Sbjct: 756 --KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG------ 807
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAY 630
LVD K Y E+ + SE+ GL P Y +++
Sbjct: 808 --------------------LVD---KGIAYFESMN--SEY---GLSPKPEHYVCVVDML 839
Query: 631 ARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
R G S+ + ++EM +KPD++ + T++
Sbjct: 840 TRAGLLSRAKEFIQEMP---IKPDALVWRTLL 868
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 122/275 (44%), Gaps = 14/275 (5%)
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALI--IQSEMEKKGVFSNAIVYNTLMDA 418
F +M + V +E ++++ C G V+ ++ I + + +G+ + +V N L+D
Sbjct: 173 LFVRMVSENVTPNEGTFSGVLEA-CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDL 231
Query: 419 FCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPT 478
+ ++ V+ A +F ++ K+ A ++ S+ L +M +G+ PT
Sbjct: 232 YSRNGFVDLARRVFDGLRLKDHSSWVA----MISGLSKNECEAEAIRLFCDMYVLGIMPT 287
Query: 479 ANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF 538
+++ ++SA + + + ++ + K+G ++ AL+ Y G A F
Sbjct: 288 PYAFSSVLSACKKIESL-EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 346
Query: 539 ENM-QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAK 597
NM QR+ + TY TL++G + G + M+++K M + +E T LV +
Sbjct: 347 SNMSQRDAV-----TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA 401
Query: 598 QGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
G + + + K+G L+N YA+
Sbjct: 402 DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 155/375 (41%), Gaps = 55/375 (14%)
Query: 285 DKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIM 344
D + +FRN F + NA I GL R+E + + + M + ++PD +T +
Sbjct: 77 DYSLSIFRNSEERNPF----VLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFV 132
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVL-GAIVKSFCAEGLVSRALIIQSEMEKK 403
+ KLG +W L A +K+F
Sbjct: 133 LKSNSKLG-----------------FRWLGRALHAATLKNF------------------- 156
Query: 404 GVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIV 463
V ++ V +L+D + K+ ++ A +F E + K + +N+L++ Y R +
Sbjct: 157 -VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMA 215
Query: 464 ENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIH 523
L M + + S++ LI Y ++ + A F M + + S+T LI+
Sbjct: 216 TTLFRSMPE----RNSGSWSTLIKGYVDSGEL-NRAKQLFELMPEKNVV----SWTTLIN 266
Query: 524 AYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEG 583
+S +G +E A + M +G+KP+ T +L ++G + ++I ++ ++
Sbjct: 267 GFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKL 326
Query: 584 TKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLL 643
+ LVD +AK G+ A V S H ++++ ++ +A G+ + Q
Sbjct: 327 DRAIGTALVDMYAKCGELDCAATVFSNMN----HKDILSWTAMIQGWAVHGRFHQAIQCF 382
Query: 644 KEMAALNLKPDSVTY 658
++M KPD V +
Sbjct: 383 RQMMYSGEKPDEVVF 397
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 174/422 (41%), Gaps = 24/422 (5%)
Query: 252 LYFFQWMRAQEPSLVTPR-ACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAI 310
L FF W AQ+P + +F L + + LF+ + S+K D +Y + I
Sbjct: 66 LGFFNWA-AQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLI 124
Query: 311 SGLLCCGRYEDAWKVYESM--EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY-----FFE 363
L+ + + A+ V E I PD C+ R L D Y F
Sbjct: 125 DTLVLGRKAQSAFWVLEEAFSTGQEIHPD--VCN------RLLAGLTSDGCYDYAQKLFV 176
Query: 364 KMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSN-AIVYNTLMDAFCKS 422
KM KGV + G + FC ++ L + E++K + N +I+ ++ + CK
Sbjct: 177 KMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKC 236
Query: 423 NHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSY 482
+ +A + E++ + KP + ++ A+ + +L + + +G+ P ++ Y
Sbjct: 237 SREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDY 296
Query: 483 TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHS-YTALIHAYSVSGWHEKAYVAF-EN 540
I K++++ A ++ G P + ALI SVS + V F
Sbjct: 297 RAFILDLISAKRLTE--AKEVAEVIVSGKFPMDNDILDALIG--SVSAVDPDSAVEFLVY 352
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
M G P+I T + L R + ++K ++L+ S+ ++++++ K G+
Sbjct: 353 MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGR 412
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYST 660
E+ + E K GL P V YN L+ A + +L EM K + TY+
Sbjct: 413 VRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNV 472
Query: 661 MI 662
+I
Sbjct: 473 LI 474
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 117/292 (40%), Gaps = 4/292 (1%)
Query: 343 IMVTVMRKLGRSAK--DAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEM 400
I + ++ L + ++ DA+Y E++ K I ++F G + ++ +
Sbjct: 225 IALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKK 284
Query: 401 EKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQP 460
K GV + Y + + + EA+ + + + + L+ + S + P
Sbjct: 285 RKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSA-VDP 343
Query: 461 KIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTA 520
L M G P + + L R K SD A+ + G SY+
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDK-SDHLIKAYELLSSKGYFSELQSYSL 402
Query: 521 LIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEK 580
+I +G ++Y A + M++EG+ P + Y L++ +A + K+W M E
Sbjct: 403 MISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEG 462
Query: 581 VEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYAR 632
+ T+N+L+ +++G+ E+ + + + G+ P Y L+ +
Sbjct: 463 CKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCK 514
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
+E ++ KG + ++ C G V + EM+K+G+ + +YN L++A CK
Sbjct: 385 YELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK 444
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ + A+ L+ EM + K T+N+L+ S + + L +M + G++P
Sbjct: 445 AEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETI 504
Query: 482 YTCLISAYGRQKKMSDMAADAFLK 505
Y LI ++ K+ + A + F K
Sbjct: 505 YMSLIEGLCKETKI-EAAMEVFRK 527
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 119/298 (39%), Gaps = 10/298 (3%)
Query: 314 LC-CGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKW 372
LC C R DA+ + E + + +PD + ++ G Y + + +K K
Sbjct: 233 LCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGN-----LYERQVVLKKKRKL 287
Query: 373 SEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV---EEAE 429
+ ++F + + ++ L E+ + V + N ++DA S + A
Sbjct: 288 GVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAV 347
Query: 430 GLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY 489
V M + P T + L R + + + G SY+ +IS
Sbjct: 348 EFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFL 407
Query: 490 GRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPS 549
+ ++ + + A +MKK G+ P Y ALI A + A ++ M EG K +
Sbjct: 408 CKAGRVRE-SYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMN 466
Query: 550 IETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDV 607
+ TY L+ G+ + ++++ M+ +E + + L++G K+ + A +V
Sbjct: 467 LTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEV 524
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 101/208 (48%), Gaps = 5/208 (2%)
Query: 404 GVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIV 463
G+ + YN ++ C+S + + EM+ K +KPTAA+F +++ + + + V
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 464 ENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA--DAFLKMKKVGIKPTSHSYTAL 521
++ M + G+ +Y +I ++KK ++ A D + + ++P S +Y+ L
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCR---MRPNSVTYSLL 293
Query: 522 IHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKV 581
IH + ++A FE M G KP E Y TL+ + GD +T + + + M +
Sbjct: 294 IHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNW 353
Query: 582 EGTKVTFNILVDGFAKQGQYMEARDVIS 609
+ LV+G A + + EA+++I+
Sbjct: 354 VPSFSVMKWLVNGLASRSKVDEAKELIA 381
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 104/219 (47%), Gaps = 3/219 (1%)
Query: 477 PTANSYTC-LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVS-GWHEKA 534
P + S+ I YGR M D + F +++ I T S AL+ A ++ + E
Sbjct: 108 PKSESFAVRAIILYGRAN-MLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEAN 166
Query: 535 YVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDG 594
V E + GI+P +ETY ++ +G T + I M + ++ T +F +++DG
Sbjct: 167 RVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDG 226
Query: 595 FAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
F K+ ++ E R V+ + G+H V TYN+++ + + ++ L+ + + ++P+
Sbjct: 227 FYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPN 286
Query: 655 SVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVMDVDSY 693
SVTYS +I+ + M+ +G D + Y
Sbjct: 287 SVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECY 325
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 40/286 (13%)
Query: 277 LLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK-DNIR 335
L GRA M D+ + FRNL + R V NA + L Y++A +VY M K I
Sbjct: 120 LYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIE 179
Query: 336 PDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALI 395
PD T + M+ V+ + G ++ E M RK +K + G ++ F E
Sbjct: 180 PDLETYNRMIRVLCESGSTSSSYSIVAE-MERKWIKPTAASFGLMIDGFYKEEKFDEVRK 238
Query: 396 IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYS 455
+ M++ GV YN ++ CK EA+ L + + ++P + T+++L+H +
Sbjct: 239 VMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFC 298
Query: 456 RRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTS 515
ENL D A + F M G KP S
Sbjct: 299 SE------ENL------------------------------DEAMNLFEVMVCNGYKPDS 322
Query: 516 HSYTALIHAYSVSGWHEKAYV-AFENMQREGIKPSIETYTTLLDGF 560
Y LIH G E A + E+M++ + PS L++G
Sbjct: 323 ECYFTLIHCLCKGGDFETALILCRESMEKNWV-PSFSVMKWLVNGL 367
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Query: 499 AADAFLKMKKV-GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLL 557
A +L+M K+ GI+P +Y +I SG +Y M+R+ IKP+ ++ ++
Sbjct: 165 ANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMI 224
Query: 558 DGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH 617
DGF + + K+ ++M V T+NI++ K+ + EA+ +I +
Sbjct: 225 DGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMR 284
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
P +TY++L++ + + L + M KPDS Y T+I+
Sbjct: 285 PNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIH 330
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 100/237 (42%), Gaps = 7/237 (2%)
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEM-KAKNVKPTAATFNILMHAYSRRMQPKIVENL 466
NA+++ LM + +EA +++EM K ++P T+N ++ ++
Sbjct: 150 NALLFACLM-----AKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSI 204
Query: 467 LAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYS 526
+AEM+ +KPTA S+ +I + +++K D M + G+ +Y +I
Sbjct: 205 VAEMERKWIKPTAASFGLMIDGFYKEEKF-DEVRKVMRMMDEFGVHVGVATYNIMIQCLC 263
Query: 527 VSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKV 586
+A + + ++P+ TY+ L+ GF + M ++++M+ +
Sbjct: 264 KRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSE 323
Query: 587 TFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLL 643
+ L+ K G + A + E + P+ L+N A + + +L+
Sbjct: 324 CYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELI 380
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 160/379 (42%), Gaps = 35/379 (9%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
+F +P RD +NA +SG G + A+ ++ M + I PD VT ++
Sbjct: 109 VFERMPE----RDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQ--- 161
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAE----GLVSRALIIQSEMEKKGV 405
S + + E M+ G++ +V + ++ + G + A ++ +++
Sbjct: 162 --SASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD- 218
Query: 406 FSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVEN 465
+ +N++ A+ +A GL+ M + KP +TF L A S + + +
Sbjct: 219 -RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINL--AASCQNPETLTQG 275
Query: 466 LLAEMQDI--GLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIH 523
L I G + IS Y + S+ A L + + T S+T +I
Sbjct: 276 RLIHSHAIHLGTDQDIEAINTFISMYSK----SEDTCSARL-LFDIMTSRTCVSWTVMIS 330
Query: 524 AYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEG 583
Y+ G ++A F M + G KP + T +L+ G + G +T W + + G
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET--GKW-IDARADIYG 387
Query: 584 TK----VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKL 639
K + N L+D ++K G EARD+ + TV+T+ ++ YA G +
Sbjct: 388 CKRDNVMICNALIDMYSKCGSIHEARDIFDNTPE----KTVVTWTTMIAGYALNGIFLEA 443
Query: 640 PQLLKEMAALNLKPDSVTY 658
+L +M L+ KP+ +T+
Sbjct: 444 LKLFSKMIDLDYKPNHITF 462
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 127/296 (42%), Gaps = 20/296 (6%)
Query: 372 WSEEVLG-AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEG 430
WS+ +G A V F V A + M ++ +A +N ++ FC+S H ++A
Sbjct: 84 WSDVFVGTATVDMFVKCNSVDYAAKVFERMPER----DATTWNAMLSGFCQSGHTDKAFS 139
Query: 431 LFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYG 490
LF EM+ + P + T L+ + S K++E + A +G+ IS YG
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199
Query: 491 RQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSI 550
+ + D A F + + T S+ ++ AYSV G A+ + M RE KP +
Sbjct: 200 KCGDL-DSAKLVFEAIDRG--DRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDL 256
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVE-GTKV---TFNILVDGFAKQGQYMEARD 606
T+ L + + +T+ + +L+ S + GT N + ++K AR
Sbjct: 257 STFINLAASCQ---NPETLTQ-GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARL 312
Query: 607 VISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ I T +++ ++++ YA G + L M KPD VT ++I
Sbjct: 313 LFD----IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLI 364
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 41/258 (15%)
Query: 316 CGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEE 375
CG EDAW ++ES + D V+ ++++ + + G S ++A FF +M + GV+
Sbjct: 304 CGSIEDAWTIFESTTE----VDEVSMTVILVGLAQNG-SEEEAIQFFIRMLQAGVEIDAN 358
Query: 376 VLGAIV--------------------------KSFCAEGLVSRALIIQSEMEKKGVFS-- 407
V+ A++ +F GL++ + + VF
Sbjct: 359 VVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRM 418
Query: 408 ---NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE 464
N + +N+++ AF + H A L+ EM VKPT TF L+HA S
Sbjct: 419 PKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGR 478
Query: 465 NLLAEMQDI-GLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIH 523
LL EM+++ G++P YTC+I GR + + A +F+ + +KP + AL+
Sbjct: 479 ELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKE--AKSFI--DSLPLKPDCKIWQALLG 534
Query: 524 AYSVSGWHEKAYVAFENM 541
A S G E A E +
Sbjct: 535 ACSFHGDTEVGEYAAEQL 552
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/439 (17%), Positives = 174/439 (39%), Gaps = 59/439 (13%)
Query: 252 LYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKF----------- 300
+ F+ ++R +E T +L +LG G + + ++ + +F
Sbjct: 126 IVFYGFLRNRE----TESGFVLLKRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALA 181
Query: 301 ------RDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRS 354
+++ + N I+ CG V++ M N+ +T + +++ + +
Sbjct: 182 ILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNV----ITLTAVISGLIE-NEL 236
Query: 355 AKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNT 414
+D F M R V + + + + + I + + K G+ S + +
Sbjct: 237 HEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESA 296
Query: 415 LMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIG 474
LMD + K +E+A +F + + +++ ++ + M G
Sbjct: 297 LMDMYSKCGSIEDAWTIF----ESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 475 LKPTANSYTCLI------SAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVS 528
++ AN + ++ ++ G K++ + +K K G + LI+ YS
Sbjct: 353 VEIDANVVSAVLGVSFIDNSLGLGKQLHSLV----IKRKFSG---NTFVNNGLINMYSKC 405
Query: 529 GWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTF 588
G + F M K + ++ +++ F R G +K+++ M + +V+ T VTF
Sbjct: 406 GDLTDSQTVFRRMP----KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTF 461
Query: 589 NILVDGFAKQGQYMEARDVISEFGKI-GLHPTVMTYNMLMNAYARGGQHSKLPQLLKE-- 645
L+ + G + R++++E ++ G+ P Y +++ R G LLKE
Sbjct: 462 LSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG-------LLKEAK 514
Query: 646 --MAALNLKPDSVTYSTMI 662
+ +L LKPD + ++
Sbjct: 515 SFIDSLPLKPDCKIWQALL 533
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 147/347 (42%), Gaps = 4/347 (1%)
Query: 267 TPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVH-IYNAAISGLLCCGRYEDAWKV 325
TP+A + L ++ + + + +L S+KF I+ I+ GR E+A +V
Sbjct: 71 TPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEV 130
Query: 326 YESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFC 385
+ + P T + ++ V+ + +S + K R GV+ E G ++ + C
Sbjct: 131 FFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALC 190
Query: 386 AEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC--KSNHVEEAEGLFVEMKAKNVKPT 443
G V A + M + V + +Y+ L+ + C K + + G +++ P
Sbjct: 191 RIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPG 250
Query: 444 AATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAF 503
+ ++M + K V ++L +M+ ++P YT ++ + A F
Sbjct: 251 LRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPK-ADKLF 309
Query: 504 LKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRA 563
++ +G+ P ++Y I+ E A +M + G +P++ TY L+ +A
Sbjct: 310 DELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKA 369
Query: 564 GDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE 610
GD +WK M + V TF+I++ + + + + A ++ E
Sbjct: 370 GDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE 416
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 126/292 (43%), Gaps = 4/292 (1%)
Query: 374 EEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC-KSNHVEEAEGLF 432
E + ++ ++ G + A+ + ++ +A N L+ K +E +
Sbjct: 108 ESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEIL 167
Query: 433 VEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQ 492
V+ V+ +TF IL+ A R + L+ M + Y+ L+S+ +
Sbjct: 168 VKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKH 227
Query: 493 KKMSDMAADAFLK-MKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN-MQREGIKPSI 550
K S +L+ ++K P YT ++ + V G K V+ N M+ + ++P +
Sbjct: 228 KDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMR-FLVEGGRGKEVVSVLNQMKCDRVEPDL 286
Query: 551 ETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE 610
YT +L G D K++ ++ + T+N+ ++G KQ A ++S
Sbjct: 287 VCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSS 346
Query: 611 FGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
K+G P V+TYN+L+ A + G S+ L KEM + +S T+ MI
Sbjct: 347 MNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMI 398
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 165/406 (40%), Gaps = 35/406 (8%)
Query: 267 TPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVY 326
+PRA T L + + G+ + +++F RDV YNA ISG + G DA + Y
Sbjct: 95 SPRAGTSLVNMYAKCGLMRRAVLVF-----GGSERDVFGYNALISGFVVNGSPLDAMETY 149
Query: 327 ESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCA 386
M + I PD T ++ DA + G+ + LG +
Sbjct: 150 REMRANGILPDKYTFPSLL--------KGSDAMELSDVKKVHGLAFK---LGFDSDCYVG 198
Query: 387 EGLVSRALIIQSEMEKKGVF------SNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV 440
GLV+ S + + VF +++++N L++ + + E+A +F +M+ + V
Sbjct: 199 SGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGV 258
Query: 441 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAA 500
+ T ++ A++ ++ G LI YG+ K + + A
Sbjct: 259 GVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEE-AN 317
Query: 501 DAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGF 560
F M + + ++ +++ + G H+ FE M GI+P I T TT+L
Sbjct: 318 SIFEAMDERDL----FTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTC 373
Query: 561 RRAGDTQTMMKIWKLMMSEKVEGTKVT----FNILVDGFAKQGQYMEARDVISEFGKIGL 616
R + +I M+ + K + N L+D + K G +AR V F + +
Sbjct: 374 GRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMV---FDSMRV 430
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ ++N+++N Y + M +KPD +T+ ++
Sbjct: 431 KDSA-SWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLL 475
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 125/307 (40%), Gaps = 14/307 (4%)
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
++V + GL+ RA+++ E+ VF YN L+ F + +A + EM+A
Sbjct: 101 SLVNMYAKCGLMRRAVLVFGGSERD-VFG----YNALISGFVVNGSPLDAMETYREMRAN 155
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
+ P TF L+ S M+ V+ + +G + L+++Y + + D
Sbjct: 156 GILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVED- 213
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
A F ++ + S + AL++ YS E A + F M+ EG+ S T T++L
Sbjct: 214 AQKVFDELPD---RDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLS 270
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP 618
F +GD I L + V N L+D + K EA + + L
Sbjct: 271 AFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDL-- 328
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYH 678
T+N ++ + G H L + M ++PD VT +T++ H
Sbjct: 329 --FTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIH 386
Query: 679 KQMIKSG 685
MI SG
Sbjct: 387 GYMIVSG 393
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 147/347 (42%), Gaps = 51/347 (14%)
Query: 320 EDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGA 379
EDA KV++ + R D V + +V ++ R +DA F KM +GV S + +
Sbjct: 212 EDAQKVFDELPD---RDDSVLWNALVNGYSQIFR-FEDALLVFSKMREEGVGVSRHTITS 267
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
++ +F G + I K G S+ +V N L+D + KS +EEA +F M ++
Sbjct: 268 VLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERD 327
Query: 440 VKPTAATFN--ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
+ T+N + +H Y + L M G++P + T ++ GR
Sbjct: 328 L----FTWNSVLCVHDYCGDHDGTLA--LFERMLCSGIRPDIVTLTTVLPTCGRL----- 376
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYS-VSGWHEKAYVAFENMQREGIKPSIETYTTL 556
A L+ + IH Y VSG + R+ I + +L
Sbjct: 377 ----ASLRQGRE------------IHGYMIVSGL----------LNRKSSNEFI--HNSL 408
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
+D + + GD + ++ M + ++NI+++G+ Q A D+ S + G+
Sbjct: 409 MDMYVKCGDLRDARMVFDSMRVKD----SASWNIMINGYGVQSCGELALDMFSCMCRAGV 464
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAAL-NLKPDSVTYSTMI 662
P +T+ L+ A + G ++ L +M + N+ P S Y+ +I
Sbjct: 465 KPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVI 511
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 91/229 (39%), Gaps = 64/229 (27%)
Query: 301 RDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY 360
RD+ +N+ + CG ++ ++E M IRPD VT + TV+ GR A
Sbjct: 326 RDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVT---LTTVLPTCGRLAS---- 378
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
++ E+ G ++ S GL++R SN ++N+LMD +
Sbjct: 379 ---------LRQGREIHGYMIVS----GLLNRK------------SSNEFIHNSLMDMYV 413
Query: 421 KSNHVEEAEGLFVEMKAKN-------------------------------VKPTAATFNI 449
K + +A +F M+ K+ VKP TF
Sbjct: 414 KCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVG 473
Query: 450 LMHAYSRRMQPKIVENLLAEMQDI-GLKPTANSYTCLISAYGRQKKMSD 497
L+ A S N LA+M+ + + PT++ Y C+I GR K+ +
Sbjct: 474 LLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEE 522
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 165/383 (43%), Gaps = 52/383 (13%)
Query: 301 RDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY 360
+ V + N I CG+ + A +++ ++ D V+ + +++ ++G +A++
Sbjct: 181 QQVFLINVLIDMYSKCGKLDQAMSLFDRCDE----RDQVSWNSLISGYVRVG-AAEEPLN 235
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCA---EGLVSRALIIQSEMEKKGVFSNAIVYNTLMD 417
KM+R G+ + LG+++K+ C EG + + + I K G+ + +V L+D
Sbjct: 236 LLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLD 295
Query: 418 AFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVE------NLLAEMQ 471
+ K+ ++EA LF M +KNV T+N ++ + +M E L +MQ
Sbjct: 296 MYAKNGSLKEAIKLFSLMPSKNV----VTYNAMISGF-LQMDEITDEASSEAFKLFMDMQ 350
Query: 472 DIGLKPTANSYTCLISA--------YGRQKKM----SDMAADAFLKMKKVGIKPTSHSYT 519
GL+P+ ++++ ++ A YGRQ ++ +D F+ +
Sbjct: 351 RRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIG-------------S 397
Query: 520 ALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE 579
ALI Y++ G E F + K I ++T+++D + ++ +++ + S
Sbjct: 398 ALIELYALMGSTEDGMQCFASTS----KQDIASWTSMIDCHVQNEQLESAFDLFRQLFSS 453
Query: 580 KVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKL 639
+ + T ++++ A + K G+ ++ YA+ G
Sbjct: 454 HIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLA 513
Query: 640 PQLLKEMAALNLKPDSVTYSTMI 662
Q+ E+ PD TYS MI
Sbjct: 514 NQVFIEVQ----NPDVATYSAMI 532
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 156/350 (44%), Gaps = 26/350 (7%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYED-----AWKVY 326
T L + + G + + LF +PS ++V YNA ISG L D A+K++
Sbjct: 291 TALLDMYAKNGSLKEAIKLFSLMPS----KNVVTYNAMISGFLQMDEITDEASSEAFKLF 346
Query: 327 ESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF--FEKMNRKGVKWSEEVLG-AIVKS 383
M++ + P T S+++ K +AK Y + K S+E +G A+++
Sbjct: 347 MDMQRRGLEPSPSTFSVVL----KACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIEL 402
Query: 384 FCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPT 443
+ G + + K+ + S + +++D ++ +E A LF ++ + +++P
Sbjct: 403 YALMGSTEDGMQCFASTSKQDIAS----WTSMIDCHVQNEQLESAFDLFRQLFSSHIRPE 458
Query: 444 AATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAF 503
T +++M A + E + G+ + T IS Y + M +A F
Sbjct: 459 EYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMP-LANQVF 517
Query: 504 LKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRA 563
++++ P +Y+A+I + + G +A FE+M+ GIKP+ + + +L
Sbjct: 518 IEVQN----PDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHG 573
Query: 564 GDTQTMMKIWKLMMSE-KVEGTKVTFNILVDGFAKQGQYMEARDVISEFG 612
G +K ++ M ++ ++ + F LVD + G+ +A ++I G
Sbjct: 574 GLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSG 623
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 169/418 (40%), Gaps = 56/418 (13%)
Query: 238 VLEVLGKERLLVCCLYFFQWMRAQEPSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSS 297
+L +LG+ R + ++ SL++PR V+ LGR KL + + + S
Sbjct: 114 MLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVV---LGRVA---KLCSVRQTVESF 167
Query: 298 KKFR-------DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRK 350
KF+ D +NA + L DA VY S+ K +PD T +I+++
Sbjct: 168 WKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLS---- 222
Query: 351 LGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAI 410
W A EM+ KG+ + +
Sbjct: 223 -------GW----------------------------KSSEEAEAFFEEMKGKGLKPDVV 247
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM 470
YN+L+D +CK +E+A L +M+ + P T+ ++ QP +L EM
Sbjct: 248 TYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEM 307
Query: 471 QDIGLKPTANSYTCLISAYGRQKKMSDMAADAFL-KMKKVGIKPTSHSYTALIHAYSVSG 529
++ G P +Y I + +++ D AD + +M K G+ P + +Y S++
Sbjct: 308 KEYGCYPDVAAYNAAIRNFCIARRLGD--ADKLVDEMVKKGLSPNATTYNLFFRVLSLAN 365
Query: 530 WHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFN 589
+++ + M P+ ++ L+ F+R M++W+ M+ + + +
Sbjct: 366 DLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSD 425
Query: 590 ILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMA 647
+L+D + EA + E + G P+ +++ + +H ++ L+++MA
Sbjct: 426 VLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKMA 483
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 9/180 (5%)
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN- 540
+ L+ ++K M+D A + + +K +P ++ L+ SGW
Sbjct: 183 FNALLRTLCQEKSMTD-ARNVYHSLKH-QFQPDLQTFNILL-----SGWKSSEEAEAFFE 235
Query: 541 -MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
M+ +G+KP + TY +L+D + + + + K+ M E+ +T+ ++ G G
Sbjct: 236 EMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIG 295
Query: 600 QYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYS 659
Q +AR+V+ E + G +P V YN + + + +L+ EM L P++ TY+
Sbjct: 296 QPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYN 355
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 21/222 (9%)
Query: 435 MKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKK 494
M+ +P TF ++M S Q ++ ++ + IG T + YG+ K
Sbjct: 101 MRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCK- 159
Query: 495 MSDMAADAFLKMKKVGIKPTSH--SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIET 552
D F K G P + S+TAL+ AY SG E+A F+ M ++ +
Sbjct: 160 ------DLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPER----NLGS 209
Query: 553 YTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFG 612
+ L+DG ++GD K++ M + +++ ++DG+AK G + ARD+ E
Sbjct: 210 WNALVDGLVKSGDLVNAKKLFDEMPKRDI----ISYTSMIDGYAKGGDMVSARDLFEEAR 265
Query: 613 KIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
+ V ++ L+ YA+ GQ ++ ++ EM A N+KPD
Sbjct: 266 GV----DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPD 303
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 117/265 (44%), Gaps = 23/265 (8%)
Query: 279 GRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDH 338
G A GD MV R+L + DV ++A I G G+ +A+KV+ M N++PD
Sbjct: 247 GYAKGGD--MVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 339 VTCSIMVTVMRKLG---RSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALI 395
+++ ++G K Y ++MN+ S V+ A++ G + RA
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS---SHYVVPALIDMNAKCGHMDRAAK 361
Query: 396 IQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYS 455
+ EM ++ + S Y ++M+ EA LF +M + + P F +++
Sbjct: 362 LFEEMPQRDLVS----YCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCG 417
Query: 456 RRMQPKIVENLLAEMQ----DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI 511
Q ++VE L + + + + Y+C+++ R K+ +A+ +K +
Sbjct: 418 ---QSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLK----EAYELIKSMPF 470
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYV 536
+ + ++ +L+ S+ G E A V
Sbjct: 471 EAHASAWGSLLGGCSLHGNTEIAEV 495
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 172/422 (40%), Gaps = 51/422 (12%)
Query: 268 PRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYE 327
R C L + + G D +FR + R V Y + I+G G +A K++E
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSD----RSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 328 SMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAE 387
ME++ I PD T + ++ + R + E + + + V A++ +
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARY-RLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC 445
Query: 388 GLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFV-----------EMK 436
G + A ++ SEM K + S +NT++ + K+ + EA LF E
Sbjct: 446 GSMQEAELVFSEMRVKDIIS----WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 501
Query: 437 AKNVKPTAATFNIL-----MHAYSRR---------------MQPKIVENLLAEM--QDIG 474
V P A+ + +H Y R M K LLA M DI
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 561
Query: 475 LKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKA 534
K S+T +I+ YG A F +M++ GI+ S+ +L++A S SG ++
Sbjct: 562 SKDLV-SWTVMIAGYGMH-GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
Query: 535 YVAFENMQRE-GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVD 593
+ F M+ E I+P++E Y ++D R GD ++K ++ + + + + L+
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGD---LIKAYRFIENMPIPPDATIWGALLC 676
Query: 594 GFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLM-NAYARGGQHSKLPQLLKEMAALNLK 652
G A V + L P Y +LM N YA + ++ +L K + L+
Sbjct: 677 GCRIHHDVKLAEKVAEKV--FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 734
Query: 653 PD 654
+
Sbjct: 735 KN 736
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 147/380 (38%), Gaps = 50/380 (13%)
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
F+KM GV+ + KSF + V + + K G V N+L+ +
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAY-SRRMQPK---IVENLLAEMQDIGLK 476
K+ V+ A +F EM ++V ++N +++ Y S + K + +L +I L
Sbjct: 242 KNQRVDSARKVFDEMTERDV----ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLA 297
Query: 477 PTANSYT-C----LIS------------AYGRQKKMSDMAADAF-----LKMKKVGIKPT 514
+ + C LIS + R+ + + D + L K +
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM 357
Query: 515 SH----SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMM 570
S SYT++I Y+ G +A FE M+ EGI P + T T +L+ R
Sbjct: 358 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 417
Query: 571 KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAY 630
++ + + + N L+D +AK G EA V SE ++++N ++ Y
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV----KDIISWNTIIGGY 473
Query: 631 AR---GGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQV 687
++ + L LL E PD T + ++ H ++++G
Sbjct: 474 SKNCYANEALSLFNLLLEEK--RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF 531
Query: 688 MD-------VDSYQKLRAIL 700
D VD Y K A+L
Sbjct: 532 SDRHVANSLVDMYAKCGALL 551
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 14/252 (5%)
Query: 363 EKMNRKGVKWSEEVLGAIVKSFCAEGLVSRA-LIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
E++ GV+W ++ ++K A + +A L + KG + Y T++D F +
Sbjct: 78 EQLPHLGVRWDSHIINRVLK---AHPPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGE 134
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ ++ +F MK K V T+ L+H S L EM+D G +PT S
Sbjct: 135 AGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVS 194
Query: 482 YTC---LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAF 538
YT ++ A GR ++ A + + +M + + P H+YT L+ +G E+A F
Sbjct: 195 YTAYMKMLFADGRVEE----ATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIF 250
Query: 539 ENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQ 598
MQ G++P L+ + G+T M ++ M K G + + I V+
Sbjct: 251 FKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYM---KENGVVLRYPIFVEALETL 307
Query: 599 GQYMEARDVISE 610
E+ D++ E
Sbjct: 308 KAAGESDDLLRE 319
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 474 GLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEK 533
G K +YT ++ +G ++ M + F MK+ G+ + +YT+LIH S SG +
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYS-VFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 534 AYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVD 593
A +E M+ G +P++ +YT + G + +++K M+ +V T+ +L++
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 594 GFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
G+ EA D+ + +IG+ P N+L+ + G+ S + ++L M
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYM 288
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%)
Query: 510 GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTM 569
G K +YT ++ + +G + Y F M+ +G+ TYT+L+ +GD
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
M++W+ M E T V++ + G+ EA +V E + + P TY +LM
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 630 YARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
G+ + + +M + ++PD + +I
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQPDKAACNILI 269
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 177/470 (37%), Gaps = 68/470 (14%)
Query: 252 LYFFQWMRAQE--PSLVTPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHI-YNA 308
L + W AQE P L ++ +L K + F K F+ H Y
Sbjct: 68 LKYSNWDSAQEQLPHLGVRWDSHIINRVLKAHPPMQKAWLFFNWAAQIKGFKHDHFTYTT 127
Query: 309 AISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRK 368
+ GR + + V+ M++ + D VT + ++ + G A +E+M
Sbjct: 128 MLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSG-DVDGAMRLWEEMRDN 186
Query: 369 GVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEA 428
G + + A +K A+G V A + EM + V N Y LM+ + EEA
Sbjct: 187 GCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEA 246
Query: 429 EGLFVEMKAKNVKPTAATFNILMH--------AYSRRM------------QPKIVE---- 464
+F +M+ V+P A NIL+ ++ R+ P VE
Sbjct: 247 LDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLRYPIFVEALET 306
Query: 465 --------NLLAEMQ-----------DIGLKPTA------NSYTCLISAYGRQKKMSDMA 499
+LL E+ DI PTA NS + + K + +A
Sbjct: 307 LKAAGESDDLLREVNSHISVESLCSSDIDETPTAEVNDTKNSDDSRVISSVLLMKQNLVA 366
Query: 500 ADAFL-KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
D L +M+ IK S +A+I E A +AF+ GI Y L+
Sbjct: 367 VDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMGIHLKKSAYLALIG 426
Query: 559 GFRRAGDTQTMMKIWKLMMSEK-----VEGTKVTFNILVDGFAKQGQYM-EARDVISEFG 612
F R+ + ++++ K M+ + +G + + GF ++ + + D++ +
Sbjct: 427 NFLRSNELPKVIEVVKEMVKAQHSLGCYQGAMLIHRL---GFGRRPRLAADVFDLLPDDQ 483
Query: 613 KIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
K V Y LM+ Y G K ++L+EM + P TY ++
Sbjct: 484 K-----GVAAYTALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVLL 528
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 9/252 (3%)
Query: 406 FSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVEN 465
F N +YN+L++ F ++ E LF+ ++ + TF +++ A +R K+ +
Sbjct: 73 FPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGID 132
Query: 466 LLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAY 525
L + + G + T L+S Y +++D A F ++ + ++TAL Y
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLND-AHKLFDEIPDRSVV----TWTALFSGY 187
Query: 526 SVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTK 585
+ SG H +A F+ M G+KP +L GD + I K M +++
Sbjct: 188 TTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS 247
Query: 586 VTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 645
LV+ +AK G+ +AR V + ++T++ ++ YA + +L +
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFDSM----VEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 646 MAALNLKPDSVT 657
M NLKPD +
Sbjct: 304 MLQENLKPDQFS 315
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 147/368 (39%), Gaps = 38/368 (10%)
Query: 308 AAISGLLCC----GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFE 363
AA++ LL GR DA K+++ + ++ VT + + + GR ++A F+
Sbjct: 147 AAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV----VTWTALFSGYTTSGRH-REAIDLFK 201
Query: 364 KMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSN 423
KM GVK + ++ + G + I ME+ + N+ V TL++ + K
Sbjct: 202 KMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCG 261
Query: 424 HVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYT 483
+E+A +F M K++ T++ ++ Y+ PK L +M LKP S
Sbjct: 262 KMEKARSVFDSMVEKDI----VTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIV 317
Query: 484 CLISAYGRQKKMSDMAADAFLKMKKVGIKPTS-HSY-------TALIHAYSVSGWHEKAY 535
+S+ A+ L + + GI H + ALI Y+ G + +
Sbjct: 318 GFLSS---------CASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGF 368
Query: 536 VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGF 595
F+ M+ + I + G + G + ++ + TF L+ G
Sbjct: 369 EVFKEMKEK----DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGC 424
Query: 596 AKQGQYMEARDVISEFGKI-GLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPD 654
G + + + L TV Y +++ + R G +L+ +M ++P+
Sbjct: 425 VHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMP---MRPN 481
Query: 655 SVTYSTMI 662
++ + ++
Sbjct: 482 AIVWGALL 489
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 181/425 (42%), Gaps = 76/425 (17%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T L + G D+ VLF +P R++ NA ++G + C R +AW ++ M K
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPE----RNIVTCNAMLTGYVKCRRMNEAWTLFREMPK 136
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM-NRKGVKWSEEVLGAI---------- 380
+ V+ ++M+T + GRS +DA F++M R V W+ V G I
Sbjct: 137 N-----VVSWTVMLTALCDDGRS-EDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQ 190
Query: 381 -VKSFCAEGLVSRALIIQSEMEKKG------VFS-----NAIVYNTLMDAFCKSNHVEEA 428
+ + +VS +I+ +E G +F N + + +++ +C+ V EA
Sbjct: 191 VFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREA 250
Query: 429 EGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISA 488
LF EM +N+ + T I A++ + ++ L EM+ + N T + A
Sbjct: 251 YRLFCEMPERNI--VSWTAMISGFAWNELYREALM--LFLEMKKDVDAVSPNGETLISLA 306
Query: 489 Y---GRQKKMSDMAADAFLKMKKVGIKPTSHS---YTALIHAYSVSGWHEKA-------- 534
Y G + + ++ G + H +L+H Y+ SG A
Sbjct: 307 YACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESF 366
Query: 535 -----------YVAFENMQR-----EGIKPSIE--TYTTLLDGFRRAGDTQTMMKIWKLM 576
Y+ +++R E +K + ++T+++DG+ AGD +++ +
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Query: 577 MSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQH 636
+ VT+ +++ G + + EA ++S+ + GL P TY++L+++ G
Sbjct: 427 HDKD----GVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSS---AGAT 479
Query: 637 SKLPQ 641
S L Q
Sbjct: 480 SNLDQ 484
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 2/162 (1%)
Query: 378 GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKA 437
G ++KS+C G +A+ I +M+ KG+ I + T++ + K +E A+ L+ EM
Sbjct: 178 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVK 237
Query: 438 KNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD 497
K + A +N+ + + +++ P+ V+ L+ EM +GLKP SY L++AY ++ M D
Sbjct: 238 KGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYC-ERGMLD 295
Query: 498 MAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
A + ++ P + ++ LI S +E+ Y F+
Sbjct: 296 EAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFK 337
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 4/219 (1%)
Query: 447 FNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAF--L 504
++ L+ +Y + +M G +A S+ L++A K D F +
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNF-DKVPQLFDEI 163
Query: 505 KMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAG 564
+ I P SY LI +Y SG EKA MQ +G++ + +TT+L + G
Sbjct: 164 PQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223
Query: 565 DTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYN 624
+ + +W M+ + E +N+ + K+ +++I E +GL P ++YN
Sbjct: 224 ELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISYN 282
Query: 625 MLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
LM AY G + ++ + + N P++ T+ T+I+
Sbjct: 283 YLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIF 321
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 153/358 (42%), Gaps = 19/358 (5%)
Query: 292 RNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKL 351
RN+ RDV +N I G ++A+K++E M+ N+ PD + I+ ++
Sbjct: 166 RNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEM---ILCNIVSAC 222
Query: 352 GRSAKDAW--YFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
GR+ + +E + V+ +L A+V + G + A E +K N
Sbjct: 223 GRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMA----REFFRKMSVRNL 278
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
V ++ + K +++A+ +F + + K++ + ++ AY P+ + E
Sbjct: 279 FVSTAMVSGYSKCGRLDDAQVIFDQTEKKDL----VCWTTMISAYVESDYPQEALRVFEE 334
Query: 470 MQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG 529
M G+KP S +ISA + D A + G++ ALI+ Y+ G
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGIL-DKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Query: 530 WHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFN 589
+ FE M R ++ +++++++ G+ + ++ M E VE +VTF
Sbjct: 394 GLDATRDVFEKMPRR----NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFV 449
Query: 590 ILVDGFAKQGQYMEARDVISEF-GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
++ G + G E + + + + + P + Y +++ + R + ++++ M
Sbjct: 450 GVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM 507
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 171/384 (44%), Gaps = 36/384 (9%)
Query: 280 RAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGR-----YEDAWKVYESMEKDNI 334
R G+ D+ LF + S D I +S CGR Y A +YE + ++++
Sbjct: 189 RFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSA---CGRTGNMRYNRA--IYEFLIENDV 243
Query: 335 RPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRAL 394
R D + +VT+ G A FF KM+ + + S A+V + G + A
Sbjct: 244 RMDTHLLTALVTMYAGAG-CMDMAREFFRKMSVRNLFVST----AMVSGYSKCGRLDDAQ 298
Query: 395 IIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAY 454
+I + EKK + + + T++ A+ +S++ +EA +F EM +KP + ++ A
Sbjct: 299 VIFDQTEKK----DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISAC 354
Query: 455 SRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPT 514
+ + + + + GL+ + LI+ Y + + D D F KM + +
Sbjct: 355 ANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGL-DATRDVFEKMPRRNVV-- 411
Query: 515 SHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWK 574
S++++I+A S+ G A F M++E ++P+ T+ +L G +G + KI+
Sbjct: 412 --SWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA 469
Query: 575 LMMSEKVEGTKVT-FNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARG 633
M E K+ + +VD F + EA +VI + + V+ + LM+A
Sbjct: 470 SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIE---SMPVASNVVIWGSLMSACRIH 526
Query: 634 GQHSKLPQLLKEMAA---LNLKPD 654
G+ L + AA L L+PD
Sbjct: 527 GELE-----LGKFAAKRILELEPD 545
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 135/336 (40%), Gaps = 42/336 (12%)
Query: 361 FFEKMNRKGVKWSEEVL------GAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNT 414
FE M GV + L + + + G ++ A + EM + V + +NT
Sbjct: 127 LFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV----VTWNT 182
Query: 415 LMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIG 474
+++ +C+ V+EA LF EMK NV P ++ A R + + + +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 475 LKPTANSYTCLISAYGRQKKMSDMAADAFLKMK---------------KVGIKPTSH--- 516
++ + T L++ Y M DMA + F KM K G +
Sbjct: 243 VRMDTHLLTALVTMYAGAGCM-DMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 517 ---------SYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQ 567
+T +I AY S + ++A FE M GIKP + + +++ G
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 568 TMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLM 627
+ + +E N L++ +AK G RDV + + V++++ ++
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPR----RNVVSWSSMI 417
Query: 628 NAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
NA + G+ S L M N++P+ VT+ ++Y
Sbjct: 418 NALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 133/324 (41%), Gaps = 58/324 (17%)
Query: 272 TVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEK 331
T L + AG D FR + R++ + A +SG CGR +DA +++ EK
Sbjct: 251 TALVTMYAGAGCMDMAREFFRKMS----VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEK 306
Query: 332 DNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVS 391
D V + M++ + ++A FE+M G+K + +++ + G++
Sbjct: 307 ----KDLVCWTTMISAYVE-SDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 392 RALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILM 451
+A + S + G+ S + N L++ + K ++ +F +M +NV
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVV---------- 411
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI 511
S++ +I+A + SD A F +MK+ +
Sbjct: 412 -----------------------------SWSSMINALSMHGEASD-ALSLFARMKQENV 441
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE-GIKPSIETYTTLLDGFRRAGDTQTMM 570
+P ++ +++ S SG E+ F +M E I P +E Y ++D F RA + +
Sbjct: 442 EPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREAL 501
Query: 571 KIWKLMMSEKVEGTKVTFNILVDG 594
++ +E V N+++ G
Sbjct: 502 EV--------IESMPVASNVVIWG 517
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 145/344 (42%), Gaps = 2/344 (0%)
Query: 305 IYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEK 364
IY S L GR +A +V E M+ I S+++ + F E
Sbjct: 250 IYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEA 309
Query: 365 MNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNH 424
+K +K E L +V + EG + L + + M K + + +++ F K
Sbjct: 310 GGKKLLKDPEMCL-KVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRG 368
Query: 425 VEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTC 484
EA ++ + + T+ I ++AY R + E L EM G +Y+
Sbjct: 369 FAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSN 428
Query: 485 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE 544
++ YG+ +++SD A KMK+ G KP Y +LI + + +A ++ M+R
Sbjct: 429 IMDMYGKTRRLSD-AVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRA 487
Query: 545 GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEA 604
+ P +YT+++ + R+ + + +++++ + + + I+V F+K + E
Sbjct: 488 KVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDEL 547
Query: 605 RDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA 648
++ + G Y+ +NA G +S++ L + A
Sbjct: 548 MRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESFDA 591
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 114/254 (44%), Gaps = 5/254 (1%)
Query: 411 VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEM 470
+Y + + KS EA + EMK K + ++ +++L+ A++ + I E L E
Sbjct: 250 IYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEA 309
Query: 471 QDIGLKPTANSYTCL--ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVS 528
G K + CL + Y R+ M + + M+K +K T A+++ +S
Sbjct: 310 G--GKKLLKDPEMCLKVVLMYVREGNM-ETTLEVVAAMRKAELKVTDCILCAIVNGFSKQ 366
Query: 529 GWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTF 588
+A +E +E + TY ++ + R ++ M+ + + V +
Sbjct: 367 RGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAY 426
Query: 589 NILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA 648
+ ++D + K + +A ++++ + G P + YN L++ + R + ++ KEM
Sbjct: 427 SNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKR 486
Query: 649 LNLKPDSVTYSTMI 662
+ PD V+Y++MI
Sbjct: 487 AKVLPDKVSYTSMI 500
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 174/421 (41%), Gaps = 56/421 (13%)
Query: 287 LMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKD-NIRPD-HVTCSIM 344
L+ +FR S K V +AA+ G Y +V++ +++ + P C IM
Sbjct: 161 LLSVFR----SDKSLAVSASDAAMKGFNKLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIM 216
Query: 345 VTVMRKLGRSAKDAWYFFEKMNRKG---VKWSEEVLGAIVKSFCAEGLVSRALIIQSEME 401
K+G + K F E +++ K S + + S G AL + EM+
Sbjct: 217 -EAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMK 275
Query: 402 KKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV--KPTAATFNILMHAYSRRMQ 459
KG+ ++ +Y+ L+ AF ++ V E LF E K + P +LM+ M+
Sbjct: 276 DKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNME 335
Query: 460 PKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSD---------------------M 498
+ ++A M+ LK T +++ + +Q+ ++ +
Sbjct: 336 TTL--EVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAI 393
Query: 499 AADAFLKMKKV-------------GIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
A +A+ +++K G +Y+ ++ Y + A M++ G
Sbjct: 394 AINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRG 453
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
KP+I Y +L+D RA D + KIWK M KV KV++ ++ + + +
Sbjct: 454 CKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCV 513
Query: 606 DVISEF----GKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 661
++ EF GKI +++ +++ + +L +LL++M + D+ YS+
Sbjct: 514 ELYQEFRMNRGKIDR----AMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSA 569
Query: 662 I 662
+
Sbjct: 570 L 570
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 157/369 (42%), Gaps = 38/369 (10%)
Query: 301 RDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY 360
RDV +N IS G E A +++ ME P+ V+ ++ ++ +L W
Sbjct: 171 RDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRL------LWL 224
Query: 361 -----FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
K +KG + E V A+V + + A + +M +K + + +N++
Sbjct: 225 ERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL----VAWNSM 280
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE--MQDI 473
+ + + + M + +P+ T ++ A SR NLL +
Sbjct: 281 IKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS------RNLLHGKFIHGY 334
Query: 474 GLKPTANS---YTC-LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAY-SVS 528
++ N+ C LI Y + + +++A F K +K + S+ +I +Y SV
Sbjct: 335 VIRSVVNADIYVNCSLIDLYFKCGE-ANLAETVFSKTQK----DVAESWNVMISSYISVG 389
Query: 529 GWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTF 588
W KA ++ M G+KP + T+T++L + + +I + ++E ++
Sbjct: 390 NWF-KAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLL 448
Query: 589 NILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAA 648
+ L+D ++K G EA + + K V+++ ++++AY GQ + EM
Sbjct: 449 SALLDMYSKCGNEKEAFRIFNSIPK----KDVVSWTVMISAYGSHGQPREALYQFDEMQK 504
Query: 649 LNLKPDSVT 657
LKPD VT
Sbjct: 505 FGLKPDGVT 513
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 161/367 (43%), Gaps = 25/367 (6%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNI-RPDHVTCSIMVTVMRKLGRSAKDAWY 360
DV+I+N+ +SG + D +V++ + +I PD T ++ LGR
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGRE------ 123
Query: 361 FFEKMNRKGVKWSEEVLGAIVKS-----FCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
F +M V S V +V S + L +L + EM ++ V S +NT+
Sbjct: 124 FLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVAS----WNTV 179
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGL 475
+ F +S E+A LF M++ +P + + + + A SR + + + + + G
Sbjct: 180 ISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGF 239
Query: 476 KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAY 535
+ + L+ YG+ + ++A + F KM + + ++ ++I Y G +
Sbjct: 240 ELDEYVNSALVDMYGKCDCL-EVAREVFQKMPRKSLV----AWNSMIKGYVAKGDSKSCV 294
Query: 536 VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGF 595
M EG +PS T T++L R+ + I ++ V L+D +
Sbjct: 295 EILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLY 354
Query: 596 AKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDS 655
K G+ A V S+ K ++N+++++Y G K ++ +M ++ +KPD
Sbjct: 355 FKCGEANLAETVFSKTQK----DVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDV 410
Query: 656 VTYSTMI 662
VT+++++
Sbjct: 411 VTFTSVL 417
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 154/355 (43%), Gaps = 23/355 (6%)
Query: 314 LCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWS 373
L CG A +V++ + K P + M++ K G K+ ++M+ G K
Sbjct: 80 LKCGCLSYARQVFDELPK----PTLSAYNYMISGYLKHGL-VKELLLLVQRMSYSGEKAD 134
Query: 374 EEVLGAIVKSFCAEG---LVSRAL--IIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEA 428
L ++K+ + G ++ R+L ++ + + K V + ++ L+D + KS +E A
Sbjct: 135 GYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESA 194
Query: 429 EGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISA 488
+F MK +NV + S M VE+ +K Y ++
Sbjct: 195 RTVFETMKDENVVCCTSMI-------SGYMNQGFVEDAEEIFNTTKVKDIV-VYNAMVEG 246
Query: 489 YGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKP 548
+ R + + + D ++ M++ G P ++ ++I A SV HE + + G+
Sbjct: 247 FSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYT 306
Query: 549 SIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVI 608
I+ ++LLD + + G +++ M + V ++ ++DG+ K G EA ++
Sbjct: 307 HIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV----FSWTSMIDGYGKNGNPEEALELF 362
Query: 609 SEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMA-ALNLKPDSVTYSTMI 662
+ + + P +T+ ++A + G K ++ + M ++KP Y+ ++
Sbjct: 363 TRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIV 417
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 122/286 (42%), Gaps = 45/286 (15%)
Query: 292 RNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKL 351
R + + K +V + ISG + G EDA +++ + + +I V + MV +
Sbjct: 195 RTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDI----VVYNAMVEGFSRS 250
Query: 352 GRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIV 411
G +AK + + M R G + +++ + + +++ K GV+++ +
Sbjct: 251 GETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKM 310
Query: 412 YNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQ 471
++L+D + K + +A +F +M+ KNV
Sbjct: 311 GSSLLDMYAKCGGINDARRVFDQMQEKNVF------------------------------ 340
Query: 472 DIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWH 531
S+T +I YG+ + A + F +MK+ I+P ++ + A S SG
Sbjct: 341 ---------SWTSMIDGYGKNGNPEE-ALELFTRMKEFRIEPNYVTFLGALSACSHSGLV 390
Query: 532 EKAYVAFENMQRE-GIKPSIETYTTLLDGFRRAGDTQTMMKIWKLM 576
+K Y FE+MQR+ +KP +E Y ++D RAGD + + M
Sbjct: 391 DKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAM 436
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 129/291 (44%), Gaps = 11/291 (3%)
Query: 296 SSKKFRDVHIYNAAISGLLCCGRY-EDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRS 354
++ K +D+ +YNA + G G + + +Y SM++ P+ T + ++ L S
Sbjct: 230 NTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVL-TS 288
Query: 355 AKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNT 414
+ ++ + GV ++ +++ + G ++ A + +M++K VFS + +
Sbjct: 289 HEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFS----WTS 344
Query: 415 LMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRR-MQPKIVENLLAEMQDI 473
++D + K+ + EEA LF MK ++P TF + A S + K E + +D
Sbjct: 345 MIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDY 404
Query: 474 GLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEK 533
+KP Y C++ GR ++ AF + + +P S + AL+ + ++ G E
Sbjct: 405 SMKPKMEHYACIVDLMGRAGDLN----KAFEFARAMPERPDSDIWAALLSSCNLHGNVEL 460
Query: 534 AYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGT 584
A +A + + Y L + + + KI ++M ++ T
Sbjct: 461 ASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKT 511
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 136/316 (43%), Gaps = 8/316 (2%)
Query: 330 EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGL 389
+++N D MV V+ KL R E++ G + V +++ F +
Sbjct: 64 KQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLLLLEIFWRGHI 123
Query: 390 VSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNI 449
+A+ + + M G N N +MD K N V A +F ++ +N +F+I
Sbjct: 124 YDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNF----FSFDI 179
Query: 450 -LMHAYSRRMQPKIV--ENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKM 506
L H SR + +V + +L M G P + ++ R +S+ A M
Sbjct: 180 ALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSE-AFQVVGLM 238
Query: 507 KKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT 566
GI + + ++ L+ + SG +KA F M + G P++ TYT+L+ GF G
Sbjct: 239 ICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMV 298
Query: 567 QTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNML 626
+ + SE + V N+++ + + G++ EAR V + K L P T+ +
Sbjct: 299 DEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASI 358
Query: 627 MNAYARGGQHSKLPQL 642
+++ G+ +P++
Sbjct: 359 LSSLCLSGKFDLVPRI 374
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/350 (18%), Positives = 147/350 (42%), Gaps = 17/350 (4%)
Query: 314 LCC--GRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVK 371
LCC G +A++V M I S++V+ + G K A F KM + G
Sbjct: 221 LCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQK-AVDLFNKMIQIGCS 279
Query: 372 WSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGL 431
+ +++K F G+V A + S+++ +G+ + ++ N ++ + + EEA +
Sbjct: 280 PNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKV 339
Query: 432 FVEMKAKNVKPTAATFNILMHAYSRR----MQPKIVENLLAEMQDIGLKPTANSYTCLIS 487
F ++ + + P TF ++ + + P+I + + + +N ++ +
Sbjct: 340 FTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGY 399
Query: 488 AYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIK 547
K +S M+ F ++YT + A G A ++ + +E
Sbjct: 400 NSYALKVLSIMSYKDF--------ALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKH 451
Query: 548 PSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDV 607
++ ++D G T + ++K + EK V++ + + G + + EA +
Sbjct: 452 LDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSL 511
Query: 608 ISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE--MAALNLKPDS 655
+ + G++P TY +++ + + K+ ++L+E + L P++
Sbjct: 512 CCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNT 561
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 144/342 (42%), Gaps = 24/342 (7%)
Query: 280 RAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHV 339
R+G K + LF + ++ Y + I G + G ++A+ V ++ + + PD V
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 340 TCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSE 399
C++M+ +LGR ++A F + ++ + + +I+ S C G + ++
Sbjct: 319 LCNLMIHTYTRLGR-FEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG---KFDLVPRI 374
Query: 400 MEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQ 459
G + + N L + F K + A + M K+ T+ + + A R
Sbjct: 375 THGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGA 434
Query: 460 PKIVENLLAEMQDIGLKP----TANSYTCLISA---YGRQKKMSDMAADAFLKMKKVGIK 512
P+ +M I +K A+ ++ +I + G+ + L+ + +
Sbjct: 435 PRAA----IKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVV 490
Query: 513 PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKI 572
+ + L+ A + E+AY +M+ GI P+ TY T++ G + +T+ + KI
Sbjct: 491 SYTVAIKGLVRAKRI----EEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKI 546
Query: 573 WKLMMSEKVE---GTKVTFNILVDGFAKQGQYMEARDVISEF 611
+ + E VE TK L+ + +G + E R V ++
Sbjct: 547 LRECIQEGVELDPNTKFQVYSLLSRY--RGDFSEFRSVFEKW 586
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 62/128 (48%)
Query: 536 VAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGF 595
+ + M EG P+ E + +L R G ++ LM+ + + +++LV GF
Sbjct: 198 IVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGF 257
Query: 596 AKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDS 655
+ G+ +A D+ ++ +IG P ++TY L+ + G + +L ++ + L PD
Sbjct: 258 FRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDI 317
Query: 656 VTYSTMIY 663
V + MI+
Sbjct: 318 VLCNLMIH 325
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 155/345 (44%), Gaps = 15/345 (4%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
DV + + +S G DA K+++++ + PD V+C+IM++ ++ R +++ F
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQ----PDVVSCNIMISGYKQ-HRLFEESLRF 137
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F KM+ G + +E G+++ + A + ++ K G F +V + L+D F K
Sbjct: 138 FSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSK 197
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+ E+A +F + + NV +N ++ R V +L EM KP + +
Sbjct: 198 NLRFEDAYKVFRDSLSANVY----CWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYT 253
Query: 482 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENM 541
Y+ +++A +K+ ++ K G + TA++ Y+ G +A F +
Sbjct: 254 YSSVLAACASLEKLR-FGKVVQARVIKCGAEDV-FVCTAIVDLYAKCGHMAEAMEVFSRI 311
Query: 542 QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQY 601
PS+ ++T +L G+ ++ D + ++I+K M VE T ++ +
Sbjct: 312 P----NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 602 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
EA V + K G + L++ Y++ G Q+ +++
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/360 (19%), Positives = 147/360 (40%), Gaps = 24/360 (6%)
Query: 274 LFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDN 333
LF L + G ++ LF+ +P F+D + + ISG G +A ++ M D
Sbjct: 491 LFTLYSKCGSLEESYKLFQGIP----FKDNACWASMISGFNEYGYLREAIGLFSEMLDDG 546
Query: 334 IRPDHVTCSIMVTVMRK---LGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLV 390
PD T + ++TV L R + Y R G+ ++ A+V + G +
Sbjct: 547 TSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL----RAGIDKGMDLGSALVNMYSKCGSL 602
Query: 391 SRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNIL 450
A + + + + + ++L+ + + +++ LF +M + + +
Sbjct: 603 KLARQVYDRLPEL----DPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSI 658
Query: 451 MHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVG 510
+ A + + + + A + IGL + + L++ Y + + D AF ++
Sbjct: 659 LKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDD-CCKAFSQING-- 715
Query: 511 IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDT-QTM 569
P ++TALI +Y+ G +A + M+ +G KP T+ +L G ++
Sbjct: 716 --PDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESY 773
Query: 570 MKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNA 629
+ ++ +E + +VD + G+ EA I+ + + P + + L+ A
Sbjct: 774 FHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFIN---NMHIKPDALVWGTLLAA 830
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 171/420 (40%), Gaps = 80/420 (19%)
Query: 264 SLVTPRACTVLFPLLGRAGMGDKLMVLF---RNLPSSKKF------RDVHIYNAAISGLL 314
+L T + +L L + +G KLM + +++ S++K R+V I N I +
Sbjct: 57 TLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYV 116
Query: 315 CCGRYEDAWKVYESMEKDNIRPDHVT---------CSIMVTVMRKLGRSAKDAWYFFEKM 365
G Y + KV+ +M N+RPDH T CS + + RK+ SA
Sbjct: 117 NNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA---------- 166
Query: 366 NRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHV 425
+ G+ + V +V + G +S A ++ EM ++ V S +N+L+ + ++
Sbjct: 167 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS----WNSLVVGYAQNQRF 222
Query: 426 EEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCL 485
++A + EM++ + A T L+ A S EN++
Sbjct: 223 DDALEVCREMESVKISHDAGTMASLLPAVSN----TTTENVM------------------ 260
Query: 486 ISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREG 545
D F KM K + S+ +I Y + +A + M+ +G
Sbjct: 261 ------------YVKDMFFKMGKKSLV----SWNVMIGVYMKNAMPVEAVELYSRMEADG 304
Query: 546 IKPSIETYTTLLDGFRRAGDTQTMM---KIWKLMMSEKVEGTKVTFNILVDGFAKQGQYM 602
+P + T++L GDT + KI + +K+ + N L+D +AK G
Sbjct: 305 FEPDAVSITSVLPA---CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLE 361
Query: 603 EARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ARDV V+++ +++AY G+ L ++ L PDS+ + T +
Sbjct: 362 KARDVFENMKS----RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTL 417
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 164/401 (40%), Gaps = 56/401 (13%)
Query: 301 RDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR----------- 349
RDV +N+ + G R++DA +V ME I D T + ++ +
Sbjct: 204 RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVK 263
Query: 350 ----KLGRSAKDAWY-----------------FFEKMNRKGVKWSEEVLGAIVKSFCAEG 388
K+G+ + +W + +M G + + +++ +
Sbjct: 264 DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 389 LVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
+S I +E+K + N ++ N L+D + K +E+A +F MK+++V + T
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV--VSWTAM 381
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK 508
I + +S R + L +++QD GL P + ++ ++A + + + L
Sbjct: 382 ISAYGFSGRGCDAVA--LFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 509 VGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQT 568
I P ++ +G ++AY ++M E P+ + LL R DT
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSME---PNERVWGALLGACRVHSDTDI 496
Query: 569 -MMKIWKLM-MSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLH----PTVMT 622
++ KL ++ + G V +L + +AK G++ E ++ + GL + +
Sbjct: 497 GLLAADKLFQLAPEQSGYYV---LLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVE 553
Query: 623 YNMLMNAYARGGQ--------HSKLPQLLKEMAALNLKPDS 655
N +++ + G + + +L L+K+M L PDS
Sbjct: 554 VNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDS 594
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 143/334 (42%), Gaps = 47/334 (14%)
Query: 301 RDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY 360
RDV Y A I G G E+A K+++ + ++ V+ + M++ + G + K+A
Sbjct: 198 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV----VSWNAMISGYAETG-NYKEALE 252
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFC 420
F+ M + V+ E + +V + G + + ++ G SN + N L+D +
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 421 KSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTAN 480
K +E A GLF + K+V ++N L+ Y+ K L EM G P N
Sbjct: 313 KCGELETACGLFERLPYKDV----ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP--N 366
Query: 481 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFEN 540
T L S + A A L +G IH Y +
Sbjct: 367 DVTML----------SILPACAHLGAIDIG---------RWIHVYI-------------D 394
Query: 541 MQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQ 600
+ +G+ + T+L+D + + GD + +++ ++ + + ++N ++ GFA G+
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS----SWNAMIFGFAMHGR 450
Query: 601 YMEARDVISEFGKIGLHPTVMTYNMLMNAYARGG 634
+ D+ S KIG+ P +T+ L++A + G
Sbjct: 451 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSG 484
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 135/317 (42%), Gaps = 60/317 (18%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
LF +P +DV +NA ISG G Y++A ++++ M K N+RPD T MVTV+
Sbjct: 222 LFDEIP----VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST---MVTVVS 274
Query: 350 --------KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEME 401
+LGR W ++ G + +++ A++ + G + A + +
Sbjct: 275 ACAQSGSIELGRQVH-LW-----IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 328
Query: 402 KKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAAT-FNIL---------- 450
K V S +NTL+ + N +EA LF EM P T +IL
Sbjct: 329 YKDVIS----WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 451 ----MHAYSRRMQPKIVE---------NLLAEMQDIG---------LKPTANSYTCLISA 488
+H Y + + ++ A+ DI L + +S+ +I
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 489 YGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQRE-GIK 547
+ + +D + D F +M+K+GI+P ++ L+ A S SG + F M ++ +
Sbjct: 445 FAMHGR-ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 503
Query: 548 PSIETYTTLLDGFRRAG 564
P +E Y ++D +G
Sbjct: 504 PKLEHYGCMIDLLGHSG 520
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 127/287 (44%), Gaps = 17/287 (5%)
Query: 379 AIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAK 438
A++K + + G + A + E+ K V S +N ++ + ++ + +EA LF +M
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVS----WNAMISGYAETGNYKEALELFKDMMKT 260
Query: 439 NVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDM 498
NV+P +T ++ A ++ ++ + + D G LI Y + ++ +
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL-ET 319
Query: 499 AADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLD 558
A F ++ + S+ LI Y+ +++A + F+ M R G P+ T ++L
Sbjct: 320 ACGLFERLPYKDVI----SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 559 GFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNI---LVDGFAKQGQYMEARDVISEFGKIG 615
G I + + ++++G ++ L+D +AK G A V +
Sbjct: 376 ACAHLGAIDIGRWI-HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI---- 430
Query: 616 LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
LH ++ ++N ++ +A G+ L M + ++PD +T+ ++
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 106/243 (43%), Gaps = 16/243 (6%)
Query: 395 IIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEE---AEGLFVEMKAKNVKPTAATFNILM 451
II ++M K G+ + + L++ S H E A +F ++ +P +N +
Sbjct: 51 IIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ----EPNLLIWNTMF 106
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI 511
++ P L M +GL P + ++ ++ + + K + + K+G
Sbjct: 107 RGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKE-GQQIHGHVLKLGC 165
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMK 571
+ +T+LI Y +G E A+ F+ + +YT L+ G+ G + K
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALIKGYASRGYIENAQK 221
Query: 572 IWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYA 631
++ + + V V++N ++ G+A+ G Y EA ++ + K + P T +++A A
Sbjct: 222 LFDEIPVKDV----VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 632 RGG 634
+ G
Sbjct: 278 QSG 280
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 170/404 (42%), Gaps = 56/404 (13%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
LF +P DV ++N I G + ++Y +M K+ + PD T ++ ++
Sbjct: 90 LFVKIPEP----DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLK 145
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
+ G + + + G+ + V A+VK + GL+ A + K+ VFS
Sbjct: 146 RDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFS-- 203
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
+N ++ + + EE+ L VEM+ V PT+ T +++ A S+ + + +
Sbjct: 204 --WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 470 MQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG 529
+ + +P+ L++AY +M D+A F MK + S+T+++ Y G
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEM-DIAVRIFRSMKARDVI----SWTSIVKGYVERG 316
Query: 530 WHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMS----------- 578
+ A F+ M ++ I ++T ++DG+ RAG ++I++ M S
Sbjct: 317 NLKLARTYFDQMP---VRDRI-SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMV 372
Query: 579 ------------------------EKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKI 614
K++ V N L+D + K G +A+ V + +
Sbjct: 373 SVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQ- 431
Query: 615 GLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
T+ ++ A GQ + ++ +M ++++PD +TY
Sbjct: 432 ---RDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITY 472
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 165/380 (43%), Gaps = 24/380 (6%)
Query: 287 LMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVT 346
LM + R + + DV +N ISG YE++ ++ ME++ + P VT ++++
Sbjct: 185 LMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLS 244
Query: 347 VMRKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVF 406
K+ + E ++ + S + A+V ++ A G + A+ I M+ + V
Sbjct: 245 ACSKV-KDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVI 303
Query: 407 SNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENL 466
S + +++ + + +++ A F +M ++ ++ I++ Y R +
Sbjct: 304 S----WTSIVKGYVERGNLKLARTYFDQMPVRD----RISWTIMIDGYLRAGCFNESLEI 355
Query: 467 LAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLK--MKKVGIKPTSHSYTALIHA 524
EMQ G+ P + +++A + + ++K + K IK ALI
Sbjct: 356 FREMQSAGMIPDEFTMVSVLTACAH---LGSLEIGEWIKTYIDKNKIKNDVVVGNALIDM 412
Query: 525 YSVSGWHEKAYVAFENM-QREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEG 583
Y G EKA F +M QR+ T+T ++ G G Q +K++ M ++
Sbjct: 413 YFKCGCSEKAQKVFHDMDQRDKF-----TWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467
Query: 584 TKVTFNILVDGFAKQGQYMEARDVISEF-GKIGLHPTVMTYNMLMNAYARGGQHSKLPQL 642
+T+ ++ G +AR ++ + P+++ Y +++ R G + ++
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527
Query: 643 LKEMAALNLKPDSVTYSTMI 662
L++M + P+S+ + ++
Sbjct: 528 LRKMP---MNPNSIVWGALL 544
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 6/254 (2%)
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
++P +N +++A +Q K V + E++ GL+P +Y + K D
Sbjct: 337 LEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKF-DRV 395
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
D F KMK G P + +Y L+ A G E+A A +M+++G+ + Y L
Sbjct: 396 HDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACC 455
Query: 560 FRRAGD-TQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHP 618
G M+++ ++ E ++TF L+ + G +++ I ++ K P
Sbjct: 456 LCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLI-AASLNGGHVDDCMAIFQYMKDKCDP 514
Query: 619 TVMTYNMLMNAYARGGQHSKLPQLLKEMAA---LNLKPDSVTYSTMIYXXXXXXXXXXXX 675
+ T NM++ Y R S+ +L +E+ + +L P+ TYS M+
Sbjct: 515 NIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEYFE 574
Query: 676 XYHKQMIKSGQVMD 689
++ M+ SG MD
Sbjct: 575 HVYQTMVLSGYQMD 588
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 145/386 (37%), Gaps = 60/386 (15%)
Query: 298 KKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKD-NIRPDHVTCSIMVTVMRKLGRSAK 356
K R +Y +S L R ++A +++ M D + PD + + + G K
Sbjct: 250 KHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAG-LLK 308
Query: 357 DAWYFFEKMNRKGVKWSEE---------------VLGAIVKSFCAEGLVSRAL-IIQSEM 400
+ E+M +K K ++ V AI+ + C L +A+ + E+
Sbjct: 309 ELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNA-CVPTLQWKAVSWVFVEL 367
Query: 401 EKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQP 460
K G+ N Y M+ +S + F +MK+ P A T+ +L+ A R +
Sbjct: 368 RKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWR--EG 425
Query: 461 KIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTA 520
KI E A +A M++ G+ T Y
Sbjct: 426 KIEE----------------------------------AVEAVRDMEQKGVIGTGSVYYE 451
Query: 521 LIHAYSVSGWHEKAYVAFENMQR-EGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSE 579
L +G A + M+R E +P T+T L+ G M I++ M +
Sbjct: 452 LACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQY-MKD 510
Query: 580 KVEGTKVTFNILVDGFAKQGQYMEARDVISEF---GKIGLHPTVMTYNMLMNAYARGGQH 636
K + T N+++ + + + EA+++ E + L P TY+ ++ A AR Q
Sbjct: 511 KCDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQW 570
Query: 637 SKLPQLLKEMAALNLKPDSVTYSTMI 662
+ + M + D +++M+
Sbjct: 571 EYFEHVYQTMVLSGYQMDQTKHASML 596
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/403 (19%), Positives = 173/403 (42%), Gaps = 50/403 (12%)
Query: 291 FRNLPSSKKF-RDVHIYNAAISGLLCCGRYEDAWKVYESM-EKDNIRPDHVTCSIMVTVM 348
F ++ KK +++ + NA + CG EDA +++E M ++DN+ + + S +
Sbjct: 450 FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQD-- 507
Query: 349 RKLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSN 408
+ +A+ F++MN G+ L + +K+ + + + K G+ +
Sbjct: 508 ----ENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRD 563
Query: 409 AIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSR-RMQPKIVENLL 467
++L+D + K +++A +F + +V + N L+ YS+ ++ +V L
Sbjct: 564 LHTGSSLIDMYSKCGIIKDARKVFSSLPEWSV----VSMNALIAGYSQNNLEEAVV--LF 617
Query: 468 AEMQDIGLKPTANSYTCLISA-------------YGRQKKMSDMAADAFLKMKKVGIKPT 514
EM G+ P+ ++ ++ A +G+ K + +L + +G+
Sbjct: 618 QEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMN 677
Query: 515 SHS-------------------YTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTT 555
S +T ++ +S +G++E+A ++ M+ +G+ P T+ T
Sbjct: 678 SRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVT 737
Query: 556 LLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIG 615
+L + I L+ + ++T N L+D +AK G + V E +
Sbjct: 738 VLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRR-- 795
Query: 616 LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
V+++N L+N YA+ G ++ M ++ PD +T+
Sbjct: 796 -RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITF 837
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 157/393 (39%), Gaps = 25/393 (6%)
Query: 316 CGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEE 375
C R DA +V+E + + P+ V + + + K G ++A FE+M +G +
Sbjct: 208 CDRISDARRVFEWI----VDPNTVCWTCLFSGYVKAGL-PEEAVLVFERMRDEGHRPDHL 262
Query: 376 VLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM 435
++ ++ G + A ++ EM V + +N ++ K A F M
Sbjct: 263 AFVTVINTYIRLGKLKDARLLFGEMSSPDV----VAWNVMISGHGKRGCETVAIEYFFNM 318
Query: 436 KAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKM 495
+ +VK T +T ++ A + + AE +GL + L+S Y + +KM
Sbjct: 319 RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKM 378
Query: 496 SDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTT 555
+ AA F +++ + A+I Y+ +G K F +M+ G T+T+
Sbjct: 379 -EAAAKVFEALEE----KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTS 433
Query: 556 LLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIG 615
LL + D + + +++ +K+ N LVD +AK G +AR + F ++
Sbjct: 434 LLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI---FERMC 490
Query: 616 LHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXX 675
V T+N ++ +Y + S+ L K M + D ++ +
Sbjct: 491 DRDNV-TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 676 XYHKQMIKSGQVMD-------VDSYQKLRAILD 701
H +K G D +D Y K I D
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 582
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 170/442 (38%), Gaps = 73/442 (16%)
Query: 306 YNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGR-----------S 354
+ SG + G E+A V+E M + RPDH+ ++ +LG+ S
Sbjct: 229 WTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS 288
Query: 355 AKD--AW------------------YFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRAL 394
+ D AW YFF M + VK + LG+++ + + L
Sbjct: 289 SPDVVAWNVMISGHGKRGCETVAIEYFF-NMRKSSVKSTRSTLGSVLSAIGIVANLDLGL 347
Query: 395 IIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAY 454
++ +E K G+ SN V ++L+ + K +E A +F ++ KN +N ++ Y
Sbjct: 348 VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN----DVFWNAMIRGY 403
Query: 455 SRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPT 514
+ + V L +M+ G ++T L+S + +M + + K +
Sbjct: 404 AHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDL-EMGSQFHSIIIKKKLAKN 462
Query: 515 SHSYTALIHAYSVSGWHEKAYVAFENM-QREGIKPSI--------ETYTTLLDGFRR--- 562
AL+ Y+ G E A FE M R+ + + E + D F+R
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL 522
Query: 563 ----------AGDTQTMMKIWKLMMSEKVEGTKV---------TFNILVDGFAKQGQYME 603
A + + L ++V V T + L+D ++K G +
Sbjct: 523 CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 582
Query: 604 ARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIY 663
AR V S + +V++ N L+ Y++ + L +EM + P +T++T++
Sbjct: 583 ARKVFSSLPEW----SVVSMNALIAGYSQNNLEEAVV-LFQEMLTRGVNPSEITFATIVE 637
Query: 664 XXXXXXXXXXXXXYHKQMIKSG 685
+H Q+ K G
Sbjct: 638 ACHKPESLTLGTQFHGQITKRG 659
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 116/258 (44%), Gaps = 22/258 (8%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
LF L S K + ++ +SG G YE+A K Y+ M D + PD T VTV+R
Sbjct: 687 LFSELSSPKS---IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQAT---FVTVLR 740
Query: 350 --KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFS 407
+ S ++ + E ++ + G + + + EM ++ S
Sbjct: 741 VCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR---S 797
Query: 408 NAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILM----HAYSRRMQPKIV 463
N + +N+L++ + K+ + E+A +F M+ ++ P TF ++ HA KI
Sbjct: 798 NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIF 857
Query: 464 ENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIH 523
E ++ + G++ + C++ GR + + AD F++ + +KP + +++L+
Sbjct: 858 EMMIGQY---GIEARVDHVACMVDLLGRWGYLQE--ADDFIEAQN--LKPDARLWSSLLG 910
Query: 524 AYSVSGWHEKAYVAFENM 541
A + G + ++ E +
Sbjct: 911 ACRIHGDDIRGEISAEKL 928
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 432 FVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGR 491
FV + + P TF+I++ +R + + M +GL+ + L+ Y +
Sbjct: 148 FVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAK 207
Query: 492 QKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIE 551
++SD A F + + P + +T L Y +G E+A + FE M+ EG +P
Sbjct: 208 CDRISD-ARRVFEWI----VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHL 262
Query: 552 TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
+ T+++ + R G +K +L+ E V +N+++ G K+G
Sbjct: 263 AFVTVINTYIRLGK----LKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/364 (18%), Positives = 154/364 (42%), Gaps = 18/364 (4%)
Query: 301 RDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWY 360
RD+H ++ I CG +DA KV+ S+ P+ S+ + + ++A
Sbjct: 562 RDLHTGSSLIDMYSKCGIIKDARKVFSSL------PEWSVVSMNALIAGYSQNNLEEAVV 615
Query: 361 FFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYN-TLMDAF 419
F++M +GV SE IV++ ++ ++ K+G S +L+ +
Sbjct: 616 LFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMY 675
Query: 420 CKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTA 479
S + EA LF E+ + + + +M +S+ + EM+ G+ P
Sbjct: 676 MNSRGMTEACALFSELSSP---KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQ 732
Query: 480 NSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFE 539
++ ++ + + A L + + + LI Y+ G + + F+
Sbjct: 733 ATFVTVLRVCSVLSSLREGRAIHSL-IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFD 791
Query: 540 NMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQG 599
M+R + ++ ++ +L++G+ + G + +KI+ M + ++TF ++ + G
Sbjct: 792 EMRR---RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAG 848
Query: 600 QYMEARDVIS-EFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 658
+ + R + G+ G+ V +++ R G + ++ A NLKPD+ +
Sbjct: 849 KVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIE---AQNLKPDARLW 905
Query: 659 STMI 662
S+++
Sbjct: 906 SSLL 909
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/400 (20%), Positives = 156/400 (39%), Gaps = 60/400 (15%)
Query: 302 DVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYF 361
++++ ++ +S C + E A KV+E++E+ N V + M+ G S K
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN----DVFWNAMIRGYAHNGESHK-VMEL 415
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCK 421
F M G + +++ + A + S + KK + N V N L+D + K
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAK 475
Query: 422 SNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANS 481
+E+A +F M ++ T+N ++ +Y + +L M G+
Sbjct: 476 CGALEDARQIFERMCDRD----NVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDG-- 529
Query: 482 YTCLISAYGRQKKMSDM--AADAFLKMKKVGIKPTSHSYTALIHAYSVSG---------- 529
CL S + + K G+ H+ ++LI YS G
Sbjct: 530 -ACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 530 ----WH----------------EKAYVAFENMQREGIKPSIETYTTLLDGFRRAGD---- 565
W E+A V F+ M G+ PS T+ T+++ +
Sbjct: 589 SLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLG 648
Query: 566 TQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR---DVISEFGKIGLHPTVMT 622
TQ +I K S EG + ++L G YM +R + + F ++ +++
Sbjct: 649 TQFHGQITKRGFSS--EGEYLGISLL-------GMYMNSRGMTEACALFSELSSPKSIVL 699
Query: 623 YNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
+ +M+ +++ G + + + KEM + PD T+ T++
Sbjct: 700 WTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVL 739
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 171/440 (38%), Gaps = 34/440 (7%)
Query: 270 ACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESM 329
+C +L P L RA L + SS +++ A I GL G+ DA M
Sbjct: 776 SCLMLIPRLCRANKAGTAFNLAEQIDSS------YVHYALIKGLSLAGKMLDAENQLRIM 829
Query: 330 EKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEK----MNRKGVKWSEEVLGAIVKSFC 385
+ + + ++M G + W E+ M RK + S + V+ C
Sbjct: 830 LSNGLSSYNKIYNVMFQ-----GYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMC 884
Query: 386 AE-----GLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKNV 440
E + + ++ E GV I+YN L+ ++ + E + +EM+ + V
Sbjct: 885 LEPQSLSAISLKEFLLLGESNPGGV----IIYNMLIFYMFRAKNHLEVNKVLLEMQGRGV 940
Query: 441 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAY---GRQKKMSD 497
P TFN L+H YS L+ M G+KP S + S+ G KK
Sbjct: 941 LPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKK--- 997
Query: 498 MAADAFLKMKKVGIK-PTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTL 556
A D + M+ G +S T ++ G KA + R G+ Y +
Sbjct: 998 -ALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAP--NYDNI 1054
Query: 557 LDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGL 616
+ G+ + + M+ + +++ +++G + Q +A D +E ++GL
Sbjct: 1055 IKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGL 1114
Query: 617 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXX 676
P++ T++ L++ + Q + +L+K M L P + T+I
Sbjct: 1115 SPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASE 1174
Query: 677 YHKQMIKSGQVMDVDSYQKL 696
+ M K G +D +++ L
Sbjct: 1175 MMEMMQKCGYEVDFETHWSL 1194
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/355 (18%), Positives = 141/355 (39%), Gaps = 45/355 (12%)
Query: 255 FQWMRAQEPSLV-TPRACTVLFPLLGRAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGL 313
F+W Q P+AC ++ +L R GM ++ +L + H G+
Sbjct: 133 FRWASVQYQGFKHLPQACEIMASMLIREGMVKEVELLLMEMER-------HGDTMVNEGI 185
Query: 314 LC--CGRYED------AWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKM 365
C G+Y D A +++ M + + P I++ + ++ R+ E
Sbjct: 186 FCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRT--------ESA 237
Query: 366 NRKGVKWSE----------EVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTL 415
R + W E + +G +++ C + V A ++ ++ G N+ +Y+ +
Sbjct: 238 YRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKI 297
Query: 416 MDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGL 475
+ + E+ E+K +P N ++H+ RR + + E++ +G
Sbjct: 298 TIGYNEKQDFEDLLSFIGEVK---YEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGF 354
Query: 476 KPTANSYTCLISAYGRQKKMSDMAADAFLKMKKV---GIKPTSHSYTALIHAYSVSGWHE 532
K ++ LI + + A L + ++ G KP +SY A++ G +
Sbjct: 355 KQDEVTFGILIGWCCYEGDIK----RAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQ 410
Query: 533 KAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEK-VEGTKV 586
+ + M+ G+ S+ T+ ++ G+ +A + +I M +E +KV
Sbjct: 411 HTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKV 465
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/320 (17%), Positives = 136/320 (42%), Gaps = 17/320 (5%)
Query: 340 TCSIMVTVMRKLGRSAKDAWYFFEKMNRKG-VKWSEEVLGAIVKSFCAEGLVSRALIIQS 398
C IM +++ + G K+ +M R G +E + ++ + + +A+++
Sbjct: 149 ACEIMASMLIREGM-VKEVELLLMEMERHGDTMVNEGIFCDLIGKYVDDFDSRKAVMLFD 207
Query: 399 EMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGL---FVEMKAK----NVKPTAATFNILM 451
M +KG+ Y L+D + + E A + +VE +A+ N+ +L
Sbjct: 208 WMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELL- 266
Query: 452 HAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI 511
+++Q V L ++ +G ++ Y+ + Y ++ D+ + + +V
Sbjct: 267 -CLDQKVQEARV--LARKLVALGCILNSSIYSKITIGYNEKQDFEDLLS----FIGEVKY 319
Query: 512 KPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMK 571
+P ++H+ E+AYV E ++ G K T+ L+ GD + +
Sbjct: 320 EPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVL 379
Query: 572 IWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYA 631
+MS+ + ++N ++ G ++G + ++ E + G+ ++ T+ +++ Y
Sbjct: 380 YLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYC 439
Query: 632 RGGQHSKLPQLLKEMAALNL 651
+ Q + +++ +M L
Sbjct: 440 KARQFEEAKRIVNKMFGYGL 459
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 156/352 (44%), Gaps = 25/352 (7%)
Query: 316 CGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSEE 375
CG A +V++ M +P V C+ ++ + GR A+DA F + +GV+W
Sbjct: 232 CGWLVGAKRVFDQMAVK--KP--VACTGLMVGYTQAGR-ARDALKLFVDLVTEGVEWDSF 286
Query: 376 VLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEM 435
V ++K+ + ++ I + + K G+ S V L+D + K + E A F E+
Sbjct: 287 VFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI 346
Query: 436 KAKNVKPTAATFNILMHAYSRRMQ----PKIVENLLAEMQDIGLKPTANSYTCLISAYGR 491
+ +P +++ ++ Y + Q K ++L ++ I T S S
Sbjct: 347 R----EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLAD 402
Query: 492 QKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIE 551
+ ADA +K +G + + +ALI YS G + A FE+M P I
Sbjct: 403 CNIGGQVHADA-IKRSLIG---SQYGESALITMYSKCGCLDDANEVFESMD----NPDIV 454
Query: 552 TYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISE- 610
+T + G G+ +++++ M+S ++ VTF ++ + G + + +
Sbjct: 455 AWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTM 514
Query: 611 FGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 662
K + PT+ Y+ +++ YAR G L + LK M + +PD++++ +
Sbjct: 515 LRKYNVAPTIDHYDCMIDIYARSGL---LDEALKFMKNMPFEPDAMSWKCFL 563
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 135/310 (43%), Gaps = 13/310 (4%)
Query: 353 RSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVY 412
R +A+ F ++M++ GV S + ++ +S ++ M + ++
Sbjct: 62 RKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQ 121
Query: 413 NTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQD 472
N ++ +C+ +E+A+ LF EM N A + ++ AY+ + L + M
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELN----AVSRTTMISAYAEQGILDKAVGLFSGMLA 177
Query: 473 IGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHE 532
G KP ++ YT L+ + + + D + + G+ + T +++ Y GW
Sbjct: 178 SGDKPPSSMYTTLLKSLVNPRAL-DFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLV 236
Query: 533 KAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFNILV 592
A F+ M +K + T L+ G+ +AG + +K++ +++E VE F++++
Sbjct: 237 GAKRVFDQM---AVKKPVAC-TGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVL 292
Query: 593 DGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLK 652
A + + + + K+GL V L++ Y + + +E+ +
Sbjct: 293 KACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR----E 348
Query: 653 PDSVTYSTMI 662
P+ V++S +I
Sbjct: 349 PNDVSWSAII 358
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 158/373 (42%), Gaps = 26/373 (6%)
Query: 290 LFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHVTCSIMVTVMR 349
LF +P RDV +N+ ISG + CG A K+++ M + ++ V+ + MV
Sbjct: 88 LFDEMP----VRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVNGCF 139
Query: 350 KLGRSAKDAWYFFEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNA 409
+ G+ + F++ + W+ ++V + G V AL + +M K N
Sbjct: 140 RSGKVDQAERLFYQMPVKDTAAWN-----SMVHGYLQFGKVDDALKLFKQMPGK----NV 190
Query: 410 IVYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAE 469
I + T++ ++ EA LF M +K T+ F ++ A + + +
Sbjct: 191 ISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGL 250
Query: 470 MQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSG 529
+ +G LI+ Y K++ D K+ + +TAL+ YS++
Sbjct: 251 IIKLGFLYEEYVSASLITFYANCKRIGDSR-----KVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 530 WHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQTMMKIWKLMMSEKVEGTKVTFN 589
HE A F M R I P+ T+ + L+ G ++ + + +E N
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGN 365
Query: 590 ILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAAL 649
LV ++ G D +S F KI +++++N ++ A+ G+ + +M L
Sbjct: 366 SLVVMYSDSGN---VNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRL 421
Query: 650 NLKPDSVTYSTMI 662
N +PD +T++ ++
Sbjct: 422 NKEPDEITFTGLL 434
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 171/410 (41%), Gaps = 54/410 (13%)
Query: 280 RAGMGDKLMVLFRNLPSSKKFRDVHIYNAAISGLLCCGRYEDAWKVYESMEKDNIRPDHV 339
R+G D+ LF +P +D +N+ + G L G+ +DA K+++ M N+ +
Sbjct: 140 RSGKVDQAERLFYQMP----VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNV----I 191
Query: 340 TCSIMVTVMRKLGRSAKDAWYFFEKMNRKGVKWSE--------------------EVLGA 379
+ + M+ + + RS +A F+ M R +K + +V G
Sbjct: 192 SWTTMICGLDQNERSG-EALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGL 250
Query: 380 IVK-SFCAEGLVSRALI-----IQSEMEKKGVFSNAI-----VYNTLMDAFCKSNHVEEA 428
I+K F E VS +LI + + + VF + V+ L+ + + E+A
Sbjct: 251 IIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDA 310
Query: 429 EGLFVEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISA 488
+F M ++ P +TF +++ S + + +GL+ A L+
Sbjct: 311 LSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVM 370
Query: 489 YGRQKKMSDMAADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKP 548
Y ++D A F+K+ K I S+ ++I + G + A+V F M R +P
Sbjct: 371 YSDSGNVND-AVSVFIKIFKKSIV----SWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425
Query: 549 SIETYTTLLDGFRRAGDTQTMMKIWKLMMS--EKVEGTKVTFNILVDGFAKQGQYMEARD 606
T+T LL G + K++ M S ++ + +VD + G+ EA +
Sbjct: 426 DEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEE 485
Query: 607 VISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAAL-NLKPDS 655
+I ++ + P M + L++A HS + + K AA+ NL S
Sbjct: 486 LIE---RMVVKPNEMVWLALLSACR---MHSDVDRGEKAAAAIFNLDSKS 529
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 125/269 (46%), Gaps = 9/269 (3%)
Query: 380 IVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLFVEMKAKN 439
+VK C V AL + +M + G+ +A + ++L+ A + + + M K+
Sbjct: 379 LVKYSCDSNEVVTALDVVEKMGEAGLMISADILHSLLHAIDEVLEFDLVRRIHSIMCTKS 438
Query: 440 VKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMA 499
VKP F ++ +R + N+L +++ L+P ++ + C+++ Y R+K +S A
Sbjct: 439 VKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCILAGYFREKNVSS-A 497
Query: 500 ADAFLKMKKVGIKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDG 559
+MK+ G+KP S ++ LI+ + K Y E M++ G++ + Y +L+D
Sbjct: 498 LMVVKQMKEAGVKPDSITFGYLINNCTQEDAITKYY---EEMKQAGVQATKRIYMSLIDA 554
Query: 560 FRRAGDTQTMMKIWKLMMSEKVEGTKVTF--NILVDGFAKQGQYMEARDVISEFGKIGLH 617
+ +G + K ++++ V ++L+ A +G++ +A + E K H
Sbjct: 555 YAASGKFE---KAKQVLVDPDVPAINQNELKSVLISALASRGKWADALHIYEEMRKAECH 611
Query: 618 PTVMTYNMLMNAYARGGQHSKLPQLLKEM 646
+ L+ G+ S L QL ++
Sbjct: 612 VDPKSIISLIEYSDSKGELSTLVQLADDL 640
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 130/273 (47%), Gaps = 14/273 (5%)
Query: 373 SEEVLGAIVKSFCAEGLVSRALIIQSEMEKKGVFSNAIVYNTLMDAFCKSNHVEEAEGLF 432
+E G+++ +C E L +A + ++M++ + +++ YN+LM + K+ E+ +
Sbjct: 122 TELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMI 181
Query: 433 VEMKAKNVKPTAATFNILMHAYSRRMQPKIVENLLAEMQDIG-LKPTANSYTCLISAYGR 491
E+KA+NV P + T+N+ M A + VE ++ EM G + P +Y+ + S Y
Sbjct: 182 QELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVD 241
Query: 492 QKKMSDMAADAFLKMKKVGIKPTSHSYTA---LIHAYSVSGWHEKAYVAFENMQREGIKP 548
+ ++ A ++++ +K T +TA LI Y G + Y + +++ K
Sbjct: 242 ----AGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKT 297
Query: 549 SIETYTTLLDGFRRAGD---TQTMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEAR 605
S Y ++ + D +T+ K W+ S ++ N+L+ +A++G +A
Sbjct: 298 SNVAYLNMIQVLVKLNDLPGAETLFKEWQANCS--TYDIRIV-NVLIGAYAQEGLIQKAN 354
Query: 606 DVISEFGKIGLHPTVMTYNMLMNAYARGGQHSK 638
++ + + G T+ + M+ Y + G ++
Sbjct: 355 ELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMAR 387
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 128/315 (40%), Gaps = 38/315 (12%)
Query: 362 FEKMNRKGVKWSEEVLGAIVKSFCAEGLVSRALIIQSEMEKKG----VFSNAI------- 410
F K + KW +G +K GL AL + ME++G V AI
Sbjct: 46 FLKGTKHVFKWE---VGDTIKKLRNRGLYYPALKLSEVMEERGMNKTVSDQAIHLDLVAK 102
Query: 411 ----------------------VYNTLMDAFCKSNHVEEAEGLFVEMKAKNVKPTAATFN 448
Y +L++ +CK E+AEGL +MK N+ P++ ++N
Sbjct: 103 AREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYN 162
Query: 449 ILMHAYSRRMQPKIVENLLAEMQDIGLKPTANSYTCLISAYGRQKKMSDMAADAFLKMKK 508
LM Y++ + + V ++ E++ + P + +Y + A +S + +M +
Sbjct: 163 SLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVER-VIEEMNR 221
Query: 509 VG-IKPTSHSYTALIHAYSVSGWHEKAYVAFENMQREGIKPSIETYTTLLDGFRRAGDTQ 567
G + P +Y+ + Y +G +KA A + ++ + + Y L+ + R G
Sbjct: 222 DGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLT 281
Query: 568 TMMKIWKLMMSEKVEGTKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLM 627
+ +IW+ + + + V + ++ K A + E+ + N+L+
Sbjct: 282 EVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLI 341
Query: 628 NAYARGGQHSKLPQL 642
AYA+ G K +L
Sbjct: 342 GAYAQEGLIQKANEL 356
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
Query: 584 TKVTFNILVDGFAKQGQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLL 643
T++T+ L++ + K+ +A ++++ ++ + P+ M+YN LM Y + G+ K+P ++
Sbjct: 122 TELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMI 181
Query: 644 KEMAALNLKPDSVTYSTMIYXXXXXXXXXXXXXYHKQMIKSGQVM-DVDSYQKLRAI 699
+E+ A N+ PDS TY+ + ++M + G+V D +Y + +I
Sbjct: 182 QELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASI 238