Miyakogusa Predicted Gene
- Lj2g3v1252590.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1252590.3 Non Chatacterized Hit- tr|J3NB42|J3NB42_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB11G0,25,2e-18,PPR,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR_2,Pentatricopepti,CUFF.36571.3
(447 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 657 0.0
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 561 e-160
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 165 6e-41
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 2e-22
AT4G17616.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 96 4e-20
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 9e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 9e-18
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 86 5e-17
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 84 2e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 6e-16
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 81 2e-15
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 80 3e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 79 5e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 5e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 6e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 74 3e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 74 3e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 8e-13
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 8e-13
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 71 2e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 69 6e-12
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 7e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 67 2e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 66 4e-11
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 4e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 65 7e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 7e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 9e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 62 1e-09
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 58 1e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 56 5e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 6e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 51 1e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 51 1e-06
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 51 2e-06
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 49 7e-06
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 49 1e-05
>AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26047372-26049348 REVERSE
LENGTH=658
Length = 658
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/449 (70%), Positives = 380/449 (84%), Gaps = 3/449 (0%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
MKPD+ A NAALE CC ++ES+ DAE V+ +M+ LGV+PDEL+FGFL YLYA KGL+EKI
Sbjct: 211 MKPDLVASNAALEACCRQMESLADAENVIESMAVLGVKPDELSFGFLAYLYARKGLREKI 270
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
+ELE LM FG +++++ YSN+ISGYVKSG+L S+ IL SL E ++ +F ET+C
Sbjct: 271 SELENLMDGFGFASRRILYSNMISGYVKSGDLDSVSDVILHSLK-EGGEESSFSVETYCE 329
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
+VK ++ ++K LA +I EAQKLE S + D+S+G+GI+NACV++G SDKAHSIL+EM
Sbjct: 330 LVKGFIESKSVKSLAKVILEAQKLESSYVGVDSSVGFGIINACVNLGFSDKAHSILEEMI 389
Query: 181 ALGG-SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 239
A GG SVG+GVY+PILKAYCKE RTAEAT LV EISSSGLQLDVE +ALIE SM++QDF
Sbjct: 390 AQGGGSVGIGVYVPILKAYCKEYRTAEATQLVTEISSSGLQLDVEISNALIEASMTNQDF 449
Query: 240 QSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 299
SAF+LFRDMRE RV DLKGSYLTIMTGL+EN RPELMAAFLDEVV DPR+EV +HDWNS
Sbjct: 450 ISAFTLFRDMRENRVVDLKGSYLTIMTGLLENQRPELMAAFLDEVVEDPRVEVNSHDWNS 509
Query: 300 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKL 359
IIHAFCK+GRLEDARRTFRRM FL++EPN+QTYLSLINGYVS EK+FNVL+LWN++K K+
Sbjct: 510 IIHAFCKSGRLEDARRTFRRMVFLRYEPNNQTYLSLINGYVSGEKYFNVLLLWNEIKGKI 569
Query: 360 SS-DGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHK 418
SS + K + DH LVDAFLYA+VKGGFFDAAMQVVEKS EMKIFVDKWRYKQAFMETHK
Sbjct: 570 SSVEAEKRSRLDHALVDAFLYALVKGGFFDAAMQVVEKSQEMKIFVDKWRYKQAFMETHK 629
Query: 419 KLKVAKLRKRNTKKMEAVIAFKNWAGLNA 447
KL++ KLRKRN KKME+++AFKNWAGLN
Sbjct: 630 KLRLPKLRKRNYKKMESLVAFKNWAGLNT 658
>AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:25933023-25934882 FORWARD
LENGTH=619
Length = 619
Score = 561 bits (1447), Expect = e-160, Method: Compositional matrix adjust.
Identities = 274/447 (61%), Positives = 338/447 (75%), Gaps = 10/447 (2%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
MKPD+ A NAALE CC ++ES+ DAE ++ +M LGV+PDEL+FGFL YLYA KGL+EKI
Sbjct: 183 MKPDLVASNAALEACCRQMESLADAENLIESMDVLGVKPDELSFGFLAYLYARKGLREKI 242
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
+ELE LM G +++++ YS++ISGYVKSG+L S IL SL +F ET+C
Sbjct: 243 SELEDLMDGLGFASRRILYSSMISGYVKSGDLDSASDVILCSLKGVGEAS-SFSEETYCE 301
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
+V+ ++ +++ LA LI EAQKLE + S+G+GIVNACV +G S K SILDE+N
Sbjct: 302 LVRGFIESKSVESLAKLIIEAQKLESMSTDVGGSVGFGIVNACVKLGFSGK--SILDELN 359
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
A GGS G+GVY+PILKAYCKE RT+EAT LV EISSSGLQLDVETY+ +IE SM+ DF
Sbjct: 360 AQGGSGGIGVYVPILKAYCKEGRTSEATQLVTEISSSGLQLDVETYNTMIEASMTKHDFL 419
Query: 241 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSI 300
SA +LFRDMRE RV DLK YLTIMTGL+EN RPELMA F++EV+ DPR+EV +HDWNSI
Sbjct: 420 SALTLFRDMRETRVADLKRCYLTIMTGLLENQRPELMAEFVEEVMEDPRVEVKSHDWNSI 479
Query: 301 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLS 360
IHAFCK+GRL DA+ TFRRM FLQ+EPN+QTYLSLINGYVS EK+F V+++W + K
Sbjct: 480 IHAFCKSGRLGDAKSTFRRMTFLQYEPNNQTYLSLINGYVSCEKYFEVVVIWKEFK---- 535
Query: 361 SDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKL 420
K K +H L DAFL A+VKGGFF A+QV+EK EMKIFVDKWRYK FMET K L
Sbjct: 536 ---DKKAKLEHALADAFLNALVKGGFFGTALQVIEKCQEMKIFVDKWRYKATFMETQKNL 592
Query: 421 KVAKLRKRNTKKMEAVIAFKNWAGLNA 447
++ KLRKR KK+E + AFKNWA +
Sbjct: 593 RLPKLRKRKMKKIEFLDAFKNWARITT 619
>AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:744026-746407 REVERSE
LENGTH=793
Length = 793
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 198/339 (58%), Gaps = 13/339 (3%)
Query: 116 ETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSI 175
E + + K +L G +K LA + +A+ E S + +DNS+ ++NAC+S+G+ D+AH +
Sbjct: 460 EIYVKLAKAFLESGKMKELAKFLLKAEH-EDSPVSSDNSMLINVINACISLGMLDQAHDL 518
Query: 176 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 235
LDEM G G VY +LKAYC N+T E T L+ + +G+QLD Y+ALI++ +
Sbjct: 519 LDEMRMAGVRTGSSVYSSLLKAYCNTNQTREVTSLLRDAQKAGIQLDSSCYEALIQSQVI 578
Query: 236 SQDFQSAFSLFRDMREARVPDLKG---SYLTIMTGLMENHRPELMAAFLDEVVGDPRIEV 292
D A ++F++M+EA++ L+G + ++ G N LM+ L E+ ++
Sbjct: 579 QNDTHGALNVFKEMKEAKI--LRGGNQKFEKLLKGCEGNAEAGLMSKLLREIREVQSLDA 636
Query: 293 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVS-AEKHFNVLML 351
G HDWN++IH F K G ++DA + +RM L PN QT+ S++ GY + K+ V L
Sbjct: 637 GVHDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSMVTGYAAIGSKYTEVTEL 696
Query: 352 WNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQ 411
W ++K ++ +KFD L+DA LY V+GGFF A +VVE + +FVDK++Y+
Sbjct: 697 WGEMKSIAAATS--SMKFDQELLDAVLYTFVRGGFFSRANEVVEMMEKKNMFVDKYKYRM 754
Query: 412 AFMETHK---KLKVAKLRKRNT-KKMEAVIAFKNWAGLN 446
F++ HK K K K++ + KK EA + FK W GL+
Sbjct: 755 LFLKYHKTAYKGKAPKVQSESQLKKREAGLVFKKWLGLS 793
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 171/346 (49%), Gaps = 18/346 (5%)
Query: 118 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 177
+ ++K Y++ G + A ++ ++ + N D +V+A V+ GL D+A +L
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 178 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISS-SGLQLDVETYDALIETSMSS 236
EM +G Y +LK YCK+ + A L+ E++ +G++ DV +Y+ +I+ +
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILI 536
Query: 237 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 296
D A + F +MR + K SY T+M + +P+L DE++ DPR++V
Sbjct: 537 DDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIA 596
Query: 297 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 356
WN ++ +C+ G +EDA+R RM F PN TY SL NG A K + L+LW ++K
Sbjct: 597 WNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIK 656
Query: 357 RKL-----------SSDGHKG-IKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFV 404
+ SSD +K D L+D V+ FF A++++ E I
Sbjct: 657 ERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPP 716
Query: 405 DKWRYKQAFMETHKKLKVAKLRK-----RNTKKMEAVIAFKNWAGL 445
+K +YK+ ++E H ++ +K R ++ A AFK W GL
Sbjct: 717 NKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGL 762
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 161/362 (44%), Gaps = 16/362 (4%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 61
+PDV ++ + G C + V DA +V M +G RPD + + + GL
Sbjct: 136 EPDVVTVSSLINGFC-QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
EL M G V Y++L++G SG S R + D +D TF AV
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRW----SDAARLMRDMVMRDIVPNVITFTAV 250
Query: 122 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 181
+ ++++G L E + + D ++N G D+A +LD M
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTR---RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Query: 182 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 241
G + Y ++ +CK R E T L E++ GL D TY+ +I+ + +
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDA 367
Query: 242 AFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSII 301
A +F M ++R P+++ +Y ++ GL N R E A L E + IE+ +N +I
Sbjct: 368 AQEIFSRM-DSR-PNIR-TYSILLYGLCMNWRVE-KALVLFENMQKSEIELDITTYNIVI 423
Query: 302 HAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSS 361
H CK G +EDA FR ++ +P+ +Y ++I+G+ + +L+ RK+
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY----RKMQE 479
Query: 362 DG 363
DG
Sbjct: 480 DG 481
>AT4G17616.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:9819608-9821632 FORWARD
LENGTH=674
Length = 674
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 158/335 (47%), Gaps = 48/335 (14%)
Query: 116 ETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSI 175
+T +V Y R N+ L+ L+ L S + AD +++ACV++G + AH I
Sbjct: 382 KTLAKLVYGYKRHDNLPELSKLLFS---LGGSRLCAD------VIDACVAIGWLEAAHDI 432
Query: 176 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 235
LD+MN+ G + L Y +L Y K A +L+ +++ +GL D + + ++
Sbjct: 433 LDDMNSAGYPMELATYRMVLSGYYKSKMLRNAEVLLKQMTKAGLITD-PSNEIVVSPETE 491
Query: 236 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 295
+D ++ ++R+ V ++ + P ++ +
Sbjct: 492 EKDSENT-----ELRDLLVQEINAG--------KQMKAPSML-----------------Y 521
Query: 296 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 355
+ NS ++ FCKA DA T+R++ ++ P Q++ LI+ Y S + + ++W D+
Sbjct: 522 ELNSSLYYFCKAKMQGDALITYRKIPKMKIPPTVQSFWILIDMYSSLGMYREITIVWGDI 581
Query: 356 KRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFME 415
KR ++S K +K +L++ + ++GG+F+ M+++ E ++ D YK +++
Sbjct: 582 KRNIAS---KNLKTTQDLLEKLVVNFLRGGYFERVMELISYMKENDMYNDLTMYKNEYLK 638
Query: 416 THKKL-KVAK----LRKRNTKKMEAVIAFKNWAGL 445
HK L + K + + +++E V F+ G+
Sbjct: 639 LHKNLYRTLKASDAVTEAQAQRLEHVKTFRKLVGI 673
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 177/399 (44%), Gaps = 23/399 (5%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+KPDV+ N ++ C + A ++ M + G+ PDE TF + Y +G +
Sbjct: 185 IKPDVSTFNVLIKALC-RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE-TFC 119
+ M EFGCS V + ++ G+ K G + L + + +D F + TF
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA----LNFIQEMSNQDGFFPDQYTFN 299
Query: 120 AVVKEYLRKGNIKGLANLINEA-QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 178
+V + G++K +++ Q+ ++ NS+ G+ +G +A +LD+
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK----LGEVKEAVEVLDQ 355
Query: 179 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 238
M S Y ++ CKEN+ EAT L ++S G+ DV T+++LI+ +++
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 239 FQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLD--EVVGDPRIEVGTHD 296
+ A LF +MR + +Y ++ L + + L E+ G R +
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI---T 472
Query: 297 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 356
+N++I FCKA + +A F M N TY +LI+G + + + L +
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD--- 529
Query: 357 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 395
++ +G K K+ +N + L +GG A +V+
Sbjct: 530 -QMIMEGQKPDKYTYN---SLLTHFCRGGDIKKAADIVQ 564
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 153/343 (44%), Gaps = 20/343 (5%)
Query: 6 AACNAALEGCCCELESVTDAERVVGTMSNL-GVRPDELTFGFL-GYLYAVKGLQEKINEL 63
+ N + G C E V DA + MSN G PD+ TF L L ++ I +
Sbjct: 260 VSVNVIVHGFCKE-GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318
Query: 64 EVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVK 123
+V++ E G Y+++ISG K G + + + ++ +D + T+ ++
Sbjct: 319 DVMLQE-GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT----RDCSPNTVTYNTLIS 373
Query: 124 EYLRKGNIKGLANLINEAQKLEPSNIKAD----NSIGYGIVNACVSMGLSDKAHSILDEM 179
++ ++ L A+ L I D NS+ G+ C++ A + +EM
Sbjct: 374 TLCKENQVEEATEL---ARVLTSKGILPDVCTFNSLIQGL---CLTRN-HRVAMELFEEM 426
Query: 180 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 239
+ G Y ++ + C + + EA ++ ++ SG V TY+ LI+ +
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 240 QSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 299
+ A +F +M V +Y T++ GL ++ R E A +D+++ + + + + +NS
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNS 545
Query: 300 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 342
++ FC+ G ++ A + M EP+ TY +LI+G A
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 145/355 (40%), Gaps = 13/355 (3%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTF-GFLGYLYAVKGLQEKIN 61
PD N + G C + V A ++ M G PD T+ + L + ++E +
Sbjct: 293 PDQYTFNTLVNGLC-KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
L+ ++ CS V Y+ LIS K N + + R L+ K TF ++
Sbjct: 352 VLDQMITR-DCSPNTVTYNTLISTLCKE-NQVEEATELARVLTS---KGILPDVCTFNSL 406
Query: 122 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 181
++ N + L E + + D ++++ S G D+A ++L +M
Sbjct: 407 IQGLCLTRNHRVAMELFEE---MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 182 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 241
G + + Y ++ +CK N+T EA + E+ G+ + TY+ LI+ S+ +
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 242 AFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSI 300
A L M E + PD K +Y +++T + A + + + E + ++
Sbjct: 524 AAQLMDQMIMEGQKPD-KYTYNSLLTHFCRGGDIKKAADIVQAMTSN-GCEPDIVTYGTL 581
Query: 301 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 355
I CKAGR+E A + R + Y +I G K + L+ ++
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 19/278 (6%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVV----GTMSNLGVRPDELTFGFLGYLYAVKG-LQ 57
PDV N+ ++G C +T RV M + G PDE T+ L KG L
Sbjct: 398 PDVCTFNSLIQGLC-----LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 58 EKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET 117
E +N L+ M GC+ + Y+ LI G+ K+ E + + + T
Sbjct: 453 EALNMLKQ-MELSGCARSVITYNTLIDGFCKANKTREAEEI----FDEMEVHGVSRNSVT 507
Query: 118 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 177
+ ++ + ++ A L+++ + K D ++ G KA I+
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQ---MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 178 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 237
M + G + Y ++ CK R A+ L+ I G+ L Y+ +I+ +
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624
Query: 238 DFQSAFSLFRDMREA-RVPDLKGSYLTIMTGLMENHRP 274
A +LFR+M E P SY + GL P
Sbjct: 625 KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGP 662
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 116/269 (43%), Gaps = 12/269 (4%)
Query: 73 SNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIK 132
S + Y ++ +SG+ M+ + L D G TF +++ Y +
Sbjct: 80 SPEPALYEEILLRLGRSGSFDDMK----KILEDMKSSRCEMGTSTFLILIESYAQFELQD 135
Query: 133 GLANLINEAQKLEPSNIKADNSIGYGIVNACV---SMGLSDKAHSILDEMNALGGSVGLG 189
+ ++++ ++ +K D ++N V S+ L + +H+ +M+ G +
Sbjct: 136 EILSVVD--WMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA---KMSVWGIKPDVS 190
Query: 190 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 249
+ ++KA C+ ++ A +++ ++ S GL D +T+ +++ + D A + M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 250 REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGR 309
E S I+ G + R E F+ E+ + +N++++ CKAG
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 310 LEDARRTFRRMNFLQFEPNDQTYLSLING 338
++ A M ++P+ TY S+I+G
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 174/401 (43%), Gaps = 54/401 (13%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 61
KP + NA + G C V+DA ++ M G +P+E+T+G + + G
Sbjct: 174 KPTLITLNALVNGLCLN-GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS-------ME-----------STILRSL 103
EL M E V YS +I G K G+L + ME +T++R
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 104 SDEDRKDWNFGGE---------------TFCAVVKEYLRKGNIKGLANLINEAQKLEPSN 148
R W+ G + F A++ ++++G ++ EA++L
Sbjct: 293 CYAGR--WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR-------EAEELHKEM 343
Query: 149 IK---ADNSIGY-GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRT 204
I+ + +++ Y +++ DKA+ +LD M + G + + ++ YCK N
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 205 AEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLT 263
+ L ++S G+ D TY+ LI+ + A LF++M RV PD+ SY
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV-SYKI 462
Query: 264 IMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFL 323
++ GL +N PE A + E + ++E+ +N IIH C A +++DA F +
Sbjct: 463 LLDGLCDNGEPE-KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 324 QFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGH 364
+P+ +TY +I G +L+ RK+ DGH
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLF----RKMEEDGH 558
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 141/333 (42%), Gaps = 14/333 (4%)
Query: 15 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 74
CCC ++ A +G + LG PD +TF L ++G + EL M E G
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 75 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 134
+ + L++G +G ++ I R + + T+ V+K + G
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVE----TGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 135 ANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 194
L+ +K+E IK D I++ G D A ++ +EM G + +Y +
Sbjct: 232 MELL---RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 195 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 254
++ +C R + L+ ++ + DV + ALI+ + + A L ++M + +
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 255 PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGTHDWNSIIHAFCKAGRLE 311
+Y +++ G + ++ + LD +V P I +N +I+ +CKA ++
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT----FNILINGYCKANLID 404
Query: 312 DARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 344
D FR+M+ + TY +LI G+ K
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 195/444 (43%), Gaps = 85/444 (19%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL-------GYLYAVKG 55
PD N + G C + + + +A ++V M G PD++T+G+L G + A K
Sbjct: 285 PDAETFNDVILGLC-KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 56 LQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGG 115
L +I + E+ V ++ LI G+V G L ++ LSD +
Sbjct: 344 LFYRIPKPEI-----------VIFNTLIHGFVTHGRLDDAKAV----LSDM-VTSYGIVP 387
Query: 116 E--TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGI-VNACVSMGLSDKA 172
+ T+ +++ Y ++G + GLA + + K N Y I V+ +G D+A
Sbjct: 388 DVCTYNSLIYGYWKEG-LVGLA--LEVLHDMRNKGCKP-NVYSYTILVDGFCKLGKIDEA 443
Query: 173 HSILDEMNALG---GSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 229
+++L+EM+A G +VG I A+CKE+R EA + E+ G + DV T+++L
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLI---SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 230 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV--GD 287
I + + A L RDM V +Y T++ + + ++E+V G
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 288 PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRM------------NFL------------ 323
P E+ +NS+I C+AG ++ AR F +M N L
Sbjct: 561 PLDEI---TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEE 617
Query: 324 --QFE---------PNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN 372
+F+ P+ T+ SLING A + + L ++ RKL ++ GI D
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF----RKLQAE---GIPPDTV 670
Query: 373 LVDAFLYAMVKGGF-FDAAMQVVE 395
+ + + KGGF +DA + + E
Sbjct: 671 TFNTLMSWLCKGGFVYDACLLLDE 694
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 146/343 (42%), Gaps = 22/343 (6%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTM-SNLGVRPDELTFGFLGYLYAVKGLQEKI 60
KP++ N + G + DA+ V+ M ++ G+ PD T+ L Y Y +GL
Sbjct: 350 KPEIVIFNTLIHGFVTH-GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL- 407
Query: 61 NELEVL--MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 118
LEVL M GC Y+ L+ G+ K G + +L +S + K G F
Sbjct: 408 -ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE-AYNVLNEMSADGLKPNTVG---F 462
Query: 119 CAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 178
++ + ++ I + E + K D +++ + A +L +
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPR---KGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 179 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 238
M + G Y ++ A+ + EA LV E+ G LD TY++LI+ + +
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 239 FQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD- 296
A SLF M R+ P S ++ GL + E F E+V + T D
Sbjct: 580 VDKARSLFEKMLRDGHAPS-NISCNILINGLCRSGMVEEAVEFQKEMV----LRGSTPDI 634
Query: 297 --WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 337
+NS+I+ C+AGR+ED FR++ P+ T+ +L++
Sbjct: 635 VTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 148/366 (40%), Gaps = 38/366 (10%)
Query: 25 AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVL--MGEFGCSNKKVFYSNL 82
A V M + + P TFG + + A + E + L +L M + GC V Y L
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVV--MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258
Query: 83 ISGYVKSGN----LASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLI 138
I K L +E L + ETF V+ + I A ++
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPD--------AETFNDVILGLCKFDRINEAAKMV 310
Query: 139 NEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILK 196
N + P +I + GY ++N +G D A + + + ++ ++
Sbjct: 311 NRMLIRGFAPDDI----TYGY-LMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIH 361
Query: 197 AYCKENRTAEA-TILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVP 255
+ R +A +L ++S G+ DV TY++LI A + DMR
Sbjct: 362 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421
Query: 256 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 315
SY ++ G + + + L+E+ D ++ T +N +I AFCK R+ +A
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 316 TFRRMNFLQFEPNDQTYLSLINGYVSAE--KHFNVLMLWNDVKRKLSSDGHKGIKFDHN- 372
FR M +P+ T+ SLI+G + KH LW + R + S+G +N
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKH----ALW--LLRDMISEGVVANTVTYNT 534
Query: 373 LVDAFL 378
L++AFL
Sbjct: 535 LINAFL 540
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 134/322 (41%), Gaps = 13/322 (4%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 61
KP+V + ++G C +L + +A V+ MS G++P+ + F L + + +
Sbjct: 421 KPNVYSYTILVDGFC-KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
E+ M GC +++LISG + + L L D + T+ +
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA----LWLLRDMISEGVVANTVTYNTL 535
Query: 122 VKEYLRKGNIKGLANLINE-AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
+ +LR+G IK L+NE + P + NS+ G+ A G DKA S+ ++M
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA----GEVDKARSLFEKML 591
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G + ++ C+ EA E+ G D+ T+++LI + +
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Query: 241 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSI 300
++FR ++ +P ++ T+M+ L + LDE + D + W+ +
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP-NHRTWSIL 710
Query: 301 IHAFCKAGRLEDARRTFRRMNF 322
+ + L+ RR F F
Sbjct: 711 LQSIIPQETLD--RRRFYNAAF 730
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 175/402 (43%), Gaps = 29/402 (7%)
Query: 15 CCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVL---MGE 69
C C ++ A ++G M LG P +T L G+ + +I+E L M E
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG-----NRISEAVALVDQMVE 163
Query: 70 FGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKG 129
G V ++ L+ G + + + + R + + D T+ AV+ ++G
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL----VTYGAVINGLCKRG 219
Query: 130 NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 189
NL+N K+E I+AD I ++++ D A ++ EM+ G +
Sbjct: 220 EPDLALNLLN---KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 190 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 249
Y ++ C R ++A+ L+ ++ + +V T+++LI+ A LF +M
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 250 REARVPDLKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAG 308
+ + +Y +++ G M + E F V D +V T +N++I+ FCKA
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT--YNTLINGFCKAK 394
Query: 309 RLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG-HKGI 367
++ D FR M+ N TY +LI+G+ A N M++ +++ SDG H I
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF----KQMVSDGVHPNI 450
Query: 368 KFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
+ L+D + K G + AM V E + K+ D + Y
Sbjct: 451 MTYNTLLD----GLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 151/376 (40%), Gaps = 42/376 (11%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY-LYAVKGLQEKIN 61
P + N+ L G C +++A +V M +G +PD +TF L + L+ E +
Sbjct: 133 PSIVTLNSLLNGFC-HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGN-------LASME-----------STILRSL 103
+E ++ + GC V Y +I+G K G L ME ST++ SL
Sbjct: 192 LVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 104 -------------SDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA--QKLEPSN 148
++ D K T+ +++ G + L+++ +K+ P N
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP-N 309
Query: 149 IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 208
+ NS+ ++A G +A + DEM + Y ++ +C +R EA
Sbjct: 310 VVTFNSL----IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 209 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 268
+ + S DV TY+ LI ++ LFRDM + +Y T++ G
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 269 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 328
+ + ++V D + +N+++ CK G+LE A F + + EP+
Sbjct: 426 FQASDCDNAQMVFKQMVSDG-VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 329 DQTYLSLINGYVSAEK 344
TY + G A K
Sbjct: 485 IYTYNIMSEGMCKAGK 500
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 130/324 (40%), Gaps = 45/324 (13%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 76
C+ V DA + M N G+RPD T
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFT--------------------------------- 277
Query: 77 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 136
YS+LIS G + R LSD + N TF +++ + ++G +
Sbjct: 278 --YSSLISCLCNYGRWSDAS----RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 137 LINEA-QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPIL 195
L +E Q+ NI NS+ G C+ L D+A I M + + Y ++
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGF---CMHDRL-DEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 196 KAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVP 255
+CK + + L ++S GL + TY LI + D +A +F+ M V
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 256 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 315
+Y T++ GL +N + E A + E + ++E + +N + CKAG++ED
Sbjct: 448 PNIMTYNTLLDGLCKNGKLE-KAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 316 TFRRMNFLQFEPNDQTYLSLINGY 339
F ++ +P+ Y ++I+G+
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGF 530
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 135/352 (38%), Gaps = 68/352 (19%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++PDV ++L C C +DA R++ M + P+ +TF L +A +G K+
Sbjct: 271 IRPDVFT-YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG---KL 326
Query: 61 NELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKD---WNFG 114
E E L E V Y++LI+G+ L + +S + D +N
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 115 GETFCAVVK-----EYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGL 168
FC K E R + +GL N++ Y +++
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVG----------------NTVTYTTLIHGFFQASD 430
Query: 169 SDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDA 228
D A + +M + G + Y +L CK + +A ++ + S ++ D+ TY+
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 229 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 288
+ E + + + LF + LKG +P+++A
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSL------SLKGV------------KPDVIA---------- 522
Query: 289 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV 340
+N++I FCK G E+A F +M P+ TY +LI ++
Sbjct: 523 --------YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL 566
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 165/385 (42%), Gaps = 29/385 (7%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 76
C++ A ++ M ++PD + + + G L M E G +
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 77 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 136
Y+ +I G+ G + + R L D ++ N TF A++ +++G +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQ----RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 137 LINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 194
L +E + + P + NS+ YG C D H M L S + + I
Sbjct: 388 LCDEMLHRCIFPDTVTY-NSMIYGF---CKHNRFDDAKH-----MFDLMASPDVVTFNTI 438
Query: 195 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 254
+ YC+ R E L+ EIS GL + TY+ LI + +A LF++M V
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 255 -PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 313
PD + ++ G EN + E A L EV+ +I++ T +N IIH CK ++++A
Sbjct: 499 CPDTITCNI-LLYGFCENEKLE-EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 314 RRTFRRMNFLQFEPNDQTYLSLINGYV--SAEKHFNVLMLWNDVKRKLSSDGHKGIKFDH 371
F + EP+ QTY +I+G+ SA NVL K+ +GH+ D+
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF------HKMKDNGHEP---DN 607
Query: 372 NLVDAFLYAMVKGGFFDAAMQVVEK 396
+ + + +K G D +++++ +
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISE 632
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 177/413 (42%), Gaps = 40/413 (9%)
Query: 15 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMG------ 68
C C+ ++ + G ++ LG +PD +TF L L+ + L+++I+E L G
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL--LHGL-CLEDRISEALALFGYMVETG 206
Query: 69 ------------EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 116
E G + + ++ LI+G G + + + + + K +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG----KGLHIDVV 262
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 176
T+ +V + G+ K NL++ K+E ++IK D I I++ G A +
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLS---KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 177 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 236
EM G + + Y ++ +C R ++A L+ ++ + DV T++ALI S+
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 237 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 296
A L +M + +Y +++ G +++R + D ++ P +
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD-LMASPDVVT---- 434
Query: 297 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 356
+N+II +C+A R+++ + R ++ N TY +LI+G+ + L D+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN----LNAAQDLF 490
Query: 357 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
+++ S G+ D + LY + + A+++ E KI +D Y
Sbjct: 491 QEMIS---HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 169/408 (41%), Gaps = 48/408 (11%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 61
KPD+ N + G C + +A ++ M G +P+ +T+G + + G
Sbjct: 190 KPDLITINTLVNGLCLSGKE-AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNL------------ASMESTIL--------- 100
EL M E V YS +I G K G+L + + I+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 101 ----------RSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 150
+ L D ++ N TF ++ ++++G ++ EA++L I
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR-------EAEELHKEMIH 361
Query: 151 ---ADNSIGY-GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 206
A ++I Y +++ DKA+ ++D M + G + + ++ YCK NR +
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 207 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 266
L ++S G+ D TY+ LI+ A LF++M +VP +Y ++
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 267 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFE 326
GL +N E A + E + ++E+ +N IIH C A +++DA F + +
Sbjct: 482 GLCDNGESE-KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 327 PNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLV 374
P +TY +I G +L+ RK+ DGH + +N++
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLF----RKMEEDGHAPDGWTYNIL 584
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 142/334 (42%), Gaps = 16/334 (4%)
Query: 15 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 74
C C + A +G + LG P+ +TF L ++G + EL M E G
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 75 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 134
+ + L++G SG A E+ +L E N T+ V+ + G
Sbjct: 192 DLITINTLVNGLCLSGKEA--EAMLLIDKMVEYGCQPN--AVTYGPVLNVMCKSGQTALA 247
Query: 135 ANLINEAQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDEMNALGGSVGLGVYIP 193
L+ +K+E NIK D ++ Y I+ + G D A ++ +EM G + + Y
Sbjct: 248 MELL---RKMEERNIKLD-AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 194 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 253
++ +C R + L+ ++ + +V T+ LI++ + + A L ++M
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 254 VPDLKGSYLTIMTGLM-ENH--RPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRL 310
+ +Y +++ G ENH + M + DP I +N +I+ +CKA R+
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT----FNILINGYCKANRI 419
Query: 311 EDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 344
+D FR+M+ + TY +LI G+ K
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 169/420 (40%), Gaps = 58/420 (13%)
Query: 28 VVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYV 87
V + G P +T+G L LY G K E+ +M E G + YS +I+G+V
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 88 KSGNLASMESTILRSLSDEDRKD---WNFGGETFCAVVKEYLRKGNIKGLANLINEAQKL 144
K + A+ + + + + D +N FC + GN+ + E QKL
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGM-------GNMDRAIQTVKEMQKL 583
Query: 145 E--PSNIKADNSI-GY-----------------------------GIVNACVSMGLSDKA 172
P+ I GY G++N V +KA
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 173 HSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIET 232
ILDEM G S Y I++ Y T +A + + GL +D+ TY+AL++
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703
Query: 233 SMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELM-AAFLDEVVGDPRIE 291
S QSA ++ ++M +P Y ++ G R ++ AA L + + ++
Sbjct: 704 CCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA--RRGDVWEAADLIQQMKKEGVK 761
Query: 292 VGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLML 351
H + S I A KAG + A +T M L +PN +TY +LI G+ A L
Sbjct: 762 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 821
Query: 352 WNDVKRKLSSDGHKGIKFD----HNLVDAFLY--AMVKGGFFDAAMQVVEKSHEMKIFVD 405
+ ++K GIK D H L+ + L ++ + + M + ++ E + VD
Sbjct: 822 YEEMKA-------MGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVD 874
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/327 (18%), Positives = 138/327 (42%), Gaps = 45/327 (13%)
Query: 32 MSNLGVRPDELTFGFLGYLYAV-KGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSG 90
M G+ P + L + YAV + + E ++ + M E G V YS ++ G+ K+G
Sbjct: 335 MRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRK-MKEEGIEMSLVTYSVIVGGFSKAG 393
Query: 91 NLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 150
+ + + + R + ++ + + N++ L+ E +E I
Sbjct: 394 HAEAADYW----FDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVRE---MEEEGID 446
Query: 151 ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATIL 210
A +I + +++ + K + + G + + Y ++ Y K + ++A +
Sbjct: 447 APIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 506
Query: 211 VMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLME 270
+ G++ +++TY +I + +D+ +AF++F DM + E
Sbjct: 507 SRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM------------------VKE 548
Query: 271 NHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQ 330
+P+++ +N+II AFC G ++ A +T + M L+ P +
Sbjct: 549 GMKPDVIL------------------YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 331 TYLSLINGYVSAEKHFNVLMLWNDVKR 357
T++ +I+GY + L +++ ++R
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRR 617
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 117/287 (40%), Gaps = 17/287 (5%)
Query: 118 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 177
F +VK Y R+G++ +++ I + I +++A D+A S +
Sbjct: 312 FGLMVKFYGRRGDMHRARETF---ERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVR 368
Query: 178 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 237
+M G + L Y I+ + K A E L+ Y +I +
Sbjct: 369 KMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC 428
Query: 238 DFQSAFSLFRDMREARVPDLKGSYLTIMTG---LMENHRPELMAAFLDEVVGDPRIEVGT 294
+ + A +L R+M E + Y T+M G + + + ++ L E P +
Sbjct: 429 NMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT-- 486
Query: 295 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 354
+ +I+ + K G++ A R M + N +TY +ING+V + N ++ D
Sbjct: 487 --YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 355 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMK 401
+ + +G+K D L + + A G D A+Q V++ +++
Sbjct: 545 MVK-------EGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 149/360 (41%), Gaps = 45/360 (12%)
Query: 15 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 74
C C ++ A V+G M LG P +TFG L + + + L +LM + G
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 75 KKVFYSNLISGYVKSGNLA-------SME-----------STIL-------------RSL 103
V Y+ LI G K+G L ME +T+L R L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 104 SDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKAD---NSIGY-GI 159
D ++ N TF A++ ++++GN+ +EAQ+L I++ N++ Y I
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNL-------DEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 160 VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGL 219
+N G A D M + G + Y ++ +CK E L +S G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 220 QLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMA 278
D+ TY+ LI + A +F M RV PD+ ++ ++ GL N E
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDII-THCILLHGLCVNGEIESAL 406
Query: 279 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 338
D++ + +G +N +IH CKA ++E A F R+ +P+ +TY +I G
Sbjct: 407 VKFDDMRESEKY-IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 123/298 (41%), Gaps = 11/298 (3%)
Query: 129 GNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGL 188
N++ +I +QK+E I D +++ A S+L +M LG +
Sbjct: 82 ANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSI 141
Query: 189 GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 248
+ +L +C NR +A LV+ + SG + +V Y+ LI+ + + A L +
Sbjct: 142 VTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNE 201
Query: 249 MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAG 308
M + + +Y T++TGL + R A L +++ I + ++I F K G
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM-KRSINPDVVTFTALIDVFVKQG 260
Query: 309 RLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIK 368
L++A+ ++ M +PN+ TY S+ING + + D K+ KG
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY-------DAKKTFDLMASKGCF 313
Query: 369 FDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKLKVAKLR 426
+ + + K D M++ ++ D + Y H +V KLR
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI---HGYCQVGKLR 368
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 165/385 (42%), Gaps = 29/385 (7%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 76
C++ A ++ M ++PD + + + G L M E G +
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 77 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 136
Y+ +I G+ G + + R L D ++ N TF A++ +++G +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQ----RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 137 LINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 194
L +E + + P + NS+ YG C D H M L S + + I
Sbjct: 388 LCDEMLHRCIFPDTVTY-NSMIYGF---CKHNRFDDAKH-----MFDLMASPDVVTFNTI 438
Query: 195 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 254
+ YC+ R E L+ EIS GL + TY+ LI + +A LF++M V
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 255 -PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 313
PD + ++ G EN + E A L EV+ +I++ T +N IIH CK ++++A
Sbjct: 499 CPDTITCNI-LLYGFCENEKLE-EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 314 RRTFRRMNFLQFEPNDQTYLSLINGYV--SAEKHFNVLMLWNDVKRKLSSDGHKGIKFDH 371
F + EP+ QTY +I+G+ SA NVL K+ +GH+ D+
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF------HKMKDNGHEP---DN 607
Query: 372 NLVDAFLYAMVKGGFFDAAMQVVEK 396
+ + + +K G D +++++ +
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISE 632
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 177/413 (42%), Gaps = 40/413 (9%)
Query: 15 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMG------ 68
C C+ ++ + G ++ LG +PD +TF L L+ + L+++I+E L G
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL--LHGL-CLEDRISEALALFGYMVETG 206
Query: 69 ------------EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 116
E G + + ++ LI+G G + + + + + K +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG----KGLHIDVV 262
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 176
T+ +V + G+ K NL++ K+E ++IK D I I++ G A +
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLS---KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 177 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 236
EM G + + Y ++ +C R ++A L+ ++ + DV T++ALI S+
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 237 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 296
A L +M + +Y +++ G +++R + D ++ P +
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD-LMASPDVVT---- 434
Query: 297 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 356
+N+II +C+A R+++ + R ++ N TY +LI+G+ + L D+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN----LNAAQDLF 490
Query: 357 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
+++ S G+ D + LY + + A+++ E KI +D Y
Sbjct: 491 QEMIS---HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 186/437 (42%), Gaps = 56/437 (12%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 61
+PD+ + + G C + V++A ++ M G +PDE+T+G + G
Sbjct: 172 RPDLVTVSTLINGLCLK-GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS-------ME-----------STILRSL 103
+L M E V YS +I K G+ ME S+++ L
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 104 SDEDRKDWNFGGE---------------TFCAVVKEYLRKGNIKGLANLINE--AQKLEP 146
++ + W+ G + TF A++ ++++G + L NE + + P
Sbjct: 291 CNDGK--WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 147 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 206
I ++ I C+ +A+ + D M + G + Y ++ +YCK R +
Sbjct: 349 DTITYNSLIDGFCKENCLH-----EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 403
Query: 207 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 266
L EISS GL + TY+ L+ S +A LF++M VP +Y ++
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 267 GLMENHRPELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQF 325
GL +N EL A + E + R+ +G +N IIH C A +++DA F ++
Sbjct: 464 GLCDNG--ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 326 EPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGG 385
+P+ TY +I G ML+ RK+ DG F +N++ + A + G
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLF----RKMKEDGCTPDDFTYNIL---IRAHLGGS 574
Query: 386 FFDAAMQVVEKSHEMKI 402
++++++E EMK+
Sbjct: 575 GLISSVELIE---EMKV 588
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 164/394 (41%), Gaps = 27/394 (6%)
Query: 15 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 74
C C + + A V+G LG PD +TF L + ++G + L M E
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 75 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE--TFCAVVKEYLRKGNIK 132
V S LI+G G ++ I R + ++ F + T+ V+ + GN
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMV------EYGFQPDEVTYGPVLNRLCKSGN-S 226
Query: 133 GLANLINEAQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDEMNALGGSVGLGVY 191
LA ++ +K+E NIKA + + Y IV ++ G D A S+ +EM G + Y
Sbjct: 227 ALA--LDLFRKMEERNIKA-SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 192 IPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE 251
++ C + + + ++ E+ + DV T+ ALI+ + A L+ +M
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 252 ARVPDLKGSYLTIMTGLMEN---HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAG 308
+ +Y +++ G + H M + +P I ++ +I+++CKA
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT----YSILINSYCKAK 399
Query: 309 RLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIK 368
R++D R FR ++ PN TY +L+ G+ + K N K +G+
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK-------LNAAKELFQEMVSRGVP 452
Query: 369 FDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKI 402
L + G + A+++ EK + ++
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 160/342 (46%), Gaps = 21/342 (6%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++PD+ ++ + G C S+ DA V G M +G++ D + L L +
Sbjct: 9 IEPDIVTASSLVNGFCLS-NSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLV--V 65
Query: 61 NELEVL--MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 118
LEVL M + G S V YS+LI+G KSG LA E R L + D K N TF
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAE----RRLHEMDSKKINPNVITF 121
Query: 119 CAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 176
A++ Y ++G + + ++ ++P N+ +S+ YG+ C+ + D+A +L
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDP-NVFTYSSLIYGL---CMHNRV-DEAIKML 176
Query: 177 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 236
D M + G + + Y + + K +R + L+ ++ G+ + + + LI+ +
Sbjct: 177 DLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQA 236
Query: 237 QDFQSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMENHRPE-LMAAFLDEVVGDPRIEVGT 294
A +F M +P+++ SY ++ GL N E ++ F E + R ++
Sbjct: 237 GKIDLALGVFGYMTSNGLIPNIR-SYNIVLAGLFANGEVEKALSRF--EHMQKTRNDLDI 293
Query: 295 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
+ +IH CKA +++A F ++ F + EP+ + Y +I
Sbjct: 294 ITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 21/322 (6%)
Query: 22 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 81
+ D ER++ MS G+ PD LT L ++Y+ G E+ E + +G + Y
Sbjct: 400 IEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEA 459
Query: 82 LISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA 141
+I GYV +G E R + + K+ E + A+++ Y + G+ G A + +
Sbjct: 460 MILGYVNAGKPKLGE----RLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSM 515
Query: 142 QKLEPSNIKADNSIGYG----IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKA 197
Q +D + + V A G DKA S DEM LG +++A
Sbjct: 516 Q------YASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRA 569
Query: 198 YCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF---RDMREARV 254
Y EN +A L++++ G+++ V TY L++ + + A L + EA
Sbjct: 570 YKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPP 629
Query: 255 PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDAR 314
+L+ S + +G+ N + L A + E D ++G ++++ +I A + G +DAR
Sbjct: 630 FELQVSLCCMYSGV-RNEKKTLQALGVLEAKRD---QMGPNEFDKVISALKRGGFEKDAR 685
Query: 315 RTFRRMNFLQFEPNDQTYLSLI 336
R ++ M +F P+ + + ++
Sbjct: 686 RMYKYMEARKFLPSQRLQMDMV 707
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 180/403 (44%), Gaps = 25/403 (6%)
Query: 12 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLMGE 69
L C C ++ A ++G M LG P +T L GY + K + + + ++ ++ E
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG-KRISDAVALVDQMV-E 183
Query: 70 FGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKG 129
G + ++ LI G + + + R + + + T+ VV ++G
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL----VTYGVVVNGLCKRG 239
Query: 130 NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 189
+I NL+N K+E + I+A+ I ++++ D A ++ EM G +
Sbjct: 240 DIDLAFNLLN---KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 190 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 249
Y ++ C R ++A+ L+ ++ + +V T++ALI+ + A L+ +M
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 250 REARV-PDLKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKA 307
+ + PD+ +Y +++ G M + E F + D V T +N++I+ FCKA
Sbjct: 357 IKRSIDPDI-FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT--YNTLINGFCKA 413
Query: 308 GRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG-HKG 366
R+++ FR M+ N TY +LI+G+ A N M++ +++ SDG H
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF----KQMVSDGVHPN 469
Query: 367 IKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
I + L+D + K G + AM V E K+ + Y
Sbjct: 470 IMTYNTLLD----GLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 508
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 155/382 (40%), Gaps = 52/382 (13%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEK 59
+P + ++ L G C + ++DA +V M +G RPD +TF L + GL K
Sbjct: 152 EPSIVTLSSLLNGYC-HGKRISDAVALVDQMVEMGYRPDTITFTTL-----IHGLFLHNK 205
Query: 60 INELEVL---MGEFGCSNKKVFYSNLISGYVKSGN-------LASME-----------ST 98
+E L M + GC V Y +++G K G+ L ME ST
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 99 ILRSLSDEDRKD--WNFGGE-----------TFCAVVK---EYLRKGNIKGLANLINEAQ 142
++ SL +D N E T+ +++ Y R + L + + E +
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE-R 324
Query: 143 KLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKEN 202
K+ P+ + + +++A V G +A + DEM + Y ++ +C +
Sbjct: 325 KINPNVVTFN-----ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 203 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYL 262
R EA + + S +V TY+ LI ++ LFR+M + + +Y
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 263 TIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNF 322
T++ G + + ++V D + +N+++ CK G+LE A F +
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDG-VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 323 LQFEPNDQTYLSLINGYVSAEK 344
+ EP TY +I G A K
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGK 520
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 4/239 (1%)
Query: 101 RSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIV 160
R LSD + N TF A++ ++++G + L +E K +I D ++
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK---RSIDPDIFTYSSLI 372
Query: 161 NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQ 220
N D+A + + M + + Y ++ +CK R E L E+S GL
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 221 LDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAF 280
+ TY LI ++D +A +F+ M V +Y T++ GL +N + E A
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE-KAMV 491
Query: 281 LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
+ E + ++E + +N +I CKAG++ED F ++ +P+ Y ++I+G+
Sbjct: 492 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 150/341 (43%), Gaps = 19/341 (5%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
P+V N ++G C +L + D +++ +M+ G+ P+ +++ + +G ++++
Sbjct: 238 PNVVTYNTLIDGYC-KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF 296
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS---MESTILRSLSDEDRKDWNFGGETFC 119
+ M G S +V Y+ LI GY K GN M + +LR T+
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-------HGLTPSVITYT 349
Query: 120 AVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 179
+++ + GN+ +++ + + + +V+ G ++A+ +L EM
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQ---MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 180 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 239
N G S + Y ++ +C + +A ++ ++ GL DV +Y ++ S D
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 240 QSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV--VGDPRIEVGTHDW 297
A + R+M E + +Y +++ G E R + +E+ VG P E +
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF---TY 523
Query: 298 NSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 338
++I+A+C G LE A + M P+ TY LING
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 163/390 (41%), Gaps = 41/390 (10%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
P V + NA L+ +++ AE V M V P+ T+ L + G +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVK------------SGNLASMESTILR--------- 101
L M GC V Y+ LI GY K S L +E ++
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 102 ----------SLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQK--LEPSNI 149
L++ +R+ ++ T+ ++K Y ++GN + E + L PS I
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 150 KADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 209
+ ++++ G ++A LD+M G Y ++ + ++ EA
Sbjct: 347 TYTS-----LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 210 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGL 268
++ E++ +G V TY+ALI + + A ++ DM+E + PD+ SY T+++G
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV-SYSTVLSGF 460
Query: 269 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 328
++ + E+V + I+ T ++S+I FC+ R ++A + M + P+
Sbjct: 461 CRSYDVDEALRVKREMV-EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 329 DQTYLSLINGYVSAEKHFNVLMLWNDVKRK 358
+ TY +LIN Y L L N++ K
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 156/401 (38%), Gaps = 77/401 (19%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++P++ + N + G C E + + V+ M+ G DE+T+ L Y +G +
Sbjct: 271 LEPNLISYNVVINGLCRE-GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS----MESTILRSLSDEDRKDWNFGGE 116
+ M G + + Y++LI K+GN+ ++ +R L +R
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER-------- 381
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAHS 174
T+ +V + +KG + ++ E PS + + ++N G + A +
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN-----ALINGHCVTGKMEDAIA 436
Query: 175 ILDEMNALGGS-----------------------------VGLGV------YIPILKAYC 199
+L++M G S V G+ Y +++ +C
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 200 KENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLK 258
++ RT EA L E+ GL D TY ALI D + A L +M E V PD+
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556
Query: 259 GSYLTIMTGLMENHRPE-----LMAAFLDEVVGDPRIEVGTHDW------------NSII 301
+Y ++ GL + R L+ F +E V +V H S+I
Sbjct: 557 -TYSVLINGLNKQSRTREAKRLLLKLFYEESVPS---DVTYHTLIENCSNIEFKSVVSLI 612
Query: 302 HAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 342
FC G + +A + F M +P+ Y +I+G+ A
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 136/317 (42%), Gaps = 32/317 (10%)
Query: 24 DAERVVGTMSNLGVRPDELTFGFLGYLYAVKG-LQEKINELEVLMGEFGCSNKKVFYSNL 82
+A RV+ M++ G P +T+ L + V G +++ I LE M E G S V YS +
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED-MKEKGLSPDVVSYSTV 456
Query: 83 ISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQ 142
+SG+ +S ++ LR + K T+ ++++ + + K +L E
Sbjct: 457 LSGFCRSYDV----DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 143 KLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKEN 202
++ + D ++NA G +KA + +EM G + Y ++ K++
Sbjct: 513 RV---GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 203 RTAEATILVMEI-SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY 261
RT EA L++++ + DV TY LIE S+ +F+S SL + +
Sbjct: 570 RTREAKRLLLKLFYEESVPSDV-TYHTLIENC-SNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 262 LTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMN 321
M G +NH+P+ A +N +IH C+AG + A ++ M
Sbjct: 628 FESMLG--KNHKPDGTA------------------YNIMIHGHCRAGDIRKAYTLYKEMV 667
Query: 322 FLQFEPNDQTYLSLING 338
F + T ++L+
Sbjct: 668 KSGFLLHTVTVIALVKA 684
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 135/321 (42%), Gaps = 16/321 (4%)
Query: 24 DAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLI 83
D E V M ++P+ TF + G K ++ M +GCS V Y+ LI
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 84 SGYVKSGNLASM--ESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA 141
GY K G M +L+ + + D TF ++ + + N+ G + E
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSP---NLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 142 --QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC 199
Q ++P N+ + NS+ G+ N G +A S+ D+M + G L Y ++ +C
Sbjct: 323 LDQDVKP-NVISYNSLINGLCNG----GKISEAISMRDKMVSAGVQPNLITYNALINGFC 377
Query: 200 KENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLK 258
K + EA + + G Y+ LI+ F+L +M RE VPD+
Sbjct: 378 KNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV- 436
Query: 259 GSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFR 318
G+Y ++ GL N E D++ ++ T ++ ++ +C+ G A +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVT--FHILMEGYCRKGESRKAAMLLK 494
Query: 319 RMNFLQFEPNDQTYLSLINGY 339
M+ + +P TY ++ GY
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGY 515
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 158/359 (44%), Gaps = 17/359 (4%)
Query: 4 DVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINEL 63
DV + ++GCC E + + ++ ++ G P+ + + L KG EK +L
Sbjct: 162 DVYSFGILIKGCC-EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 64 EVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVK 123
MG+ G + Y+ LI+G K+G + + ED N T+ V+
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNG--VKKQGFEMYEKMQEDGVFPNL--YTYNCVMN 276
Query: 124 EYLRKGNIKGLANLINEAQKLEPS-NIKADNSIGYGIVNACVSMGLSDKAHSILDEMNAL 182
+ + G K + +E ++ S NI N++ G+ C M L++ A+ ++D+M +
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL---CREMKLNE-ANKVVDQMKSD 332
Query: 183 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSA 242
G + L Y ++ +C + +A L ++ S GL + TY+ L+ D A
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392
Query: 243 FSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAF---LDEVVGDPRIEVGTHDWNS 299
+ ++M E + K +Y ++ + E ++E+ P + H ++
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV----HTYSV 448
Query: 300 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 358
+IH FC G++ +A R F+ M EPN+ Y ++I GY + L L +++ K
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 143/321 (44%), Gaps = 23/321 (7%)
Query: 25 AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLIS 84
+E++ M G++PD TF + G+ ++ E M FGC V + +I
Sbjct: 194 SEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMID 253
Query: 85 GYVKSGNLASMESTILRSLSDEDRKD-WNFGGETFCAVVKEYLRKGNIKGLANLINEAQK 143
Y ++GN+ + SL D R + W TF +++ Y GN G N+ E +
Sbjct: 254 AYGRAGNV-----DMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKA 308
Query: 144 LEPSNIKADNSIGYGIVNACVSMGLSDK---AHSILDEMNALGGSVGLGVYIPILKAYCK 200
L +K + I +++ SMG + + A I ++ G + Y +++AY +
Sbjct: 309 L---GVKPNLVIYNRLID---SMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGR 362
Query: 201 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG- 259
+A + E+ GL L V Y+ L+ ++ AF +F+DM+ D
Sbjct: 363 ARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSW 422
Query: 260 SYLTIMTGLMENHR-PELMAAFLD--EVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRT 316
++ +++T + R E AA L E +P + V T S+I + KA +++D RT
Sbjct: 423 TFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLT----SVIQCYGKAKQVDDVVRT 478
Query: 317 FRRMNFLQFEPNDQTYLSLIN 337
F ++ L P+D+ L+N
Sbjct: 479 FDQVLELGITPDDRFCGCLLN 499
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 145/341 (42%), Gaps = 48/341 (14%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++P V N ++G C + + + DA + M G+RP+ +T
Sbjct: 252 LEPGVLIYNTIIDGLC-KYKHMDDALNLFKEMETKGIRPNVVT----------------- 293
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
YS+LIS G + R LSD + N TF A
Sbjct: 294 ------------------YSSLISCLCNYGRWSDAS----RLLSDMIERKINPDVFTFSA 331
Query: 121 VVKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 178
++ ++++G + L +E K ++PS + + ++N D+A + +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS-----LINGFCMHDRLDEAKQMFEF 386
Query: 179 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 238
M + + Y ++K +CK R E + E+S GL + TY+ LI+ + D
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 239 FQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWN 298
A +F++M VP +Y T++ GL +N + E A + E + ++E + +N
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE-KAMVVFEYLQRSKMEPTIYTYN 505
Query: 299 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
+I CKAG++ED F ++ +P+ Y ++I+G+
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 164/413 (39%), Gaps = 41/413 (9%)
Query: 10 AALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLM 67
+ L C C + A V+G M LG P+ +T L GY ++ ++I+E L+
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS-----KRISEAVALV 174
Query: 68 GEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 124
+ G V ++ LI G + + I R ++ + D T+ VV
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL----VTYGVVVNG 230
Query: 125 YLRKGNIKGLANLIN--EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNAL 182
++G+ NL+N E KLEP + I I++ D A ++ EM
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVL-----IYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 183 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSA 242
G + Y ++ C R ++A+ L+ ++ + DV T+ ALI+ + A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 243 FSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH------D 296
L+ +M + + +Y +++ G + R LDE V H
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDR-------LDEAKQMFEFMVSKHCFPDVVT 398
Query: 297 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 356
+N++I FCK R+E+ FR M+ N TY LI G A + ++
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD----CDMAQEIF 454
Query: 357 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
+++ SDG +N L + K G + AM V E K+ + Y
Sbjct: 455 KEMVSDGVPPNIMTYN---TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 151/382 (39%), Gaps = 52/382 (13%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEK 59
+P++ ++ L G C + +++A +V M G +P+ +TF L + GL K
Sbjct: 148 EPNIVTLSSLLNGYC-HSKRISEAVALVDQMFVTGYQPNTVTFNTL-----IHGLFLHNK 201
Query: 60 INELEVLMGEF---GCSNKKVFYSNLISGYVKSGN-------LASME-----------ST 98
+E L+ GC V Y +++G K G+ L ME +T
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 99 ILRSLSDEDRKDWNFGGETFCAVVKEYLRKG---NIKGLANLIN---------EAQKLEP 146
I+ L D + KE KG N+ ++LI+ +A +L
Sbjct: 262 IIDGLCKYKHMDDALN------LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 147 S----NIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKEN 202
I D +++A V G +A + DEM + Y ++ +C +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 203 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYL 262
R EA + + S DV TY+ LI+ + + +FR+M + + +Y
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 263 TIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNF 322
++ GL + ++ E+V D + +N+++ CK G+LE A F +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 323 LQFEPNDQTYLSLINGYVSAEK 344
+ EP TY +I G A K
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGK 516
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 132/348 (37%), Gaps = 68/348 (19%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++P+V ++L C C +DA R++ M + PD TF L + +G K+
Sbjct: 287 IRPNVVT-YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG---KL 342
Query: 61 NELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE---DRKDWNFG 114
E E L E V YS+LI+G+ L + +S D +N
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 115 GETFCAVVK-----EYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGI-VNACVSMGL 168
+ FC + E R+ + +GL N++ Y I + G
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVG----------------NTVTYNILIQGLFQAGD 446
Query: 169 SDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDA 228
D A I EM + G + Y +L CK + +A ++ + S ++ + TY+
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 229 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 288
+IE + + + LF ++ LKG +P+++A
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNL------SLKGV------------KPDVVA---------- 538
Query: 289 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
+N++I FC+ G E+A F+ M PN Y +LI
Sbjct: 539 --------YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 11/247 (4%)
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKL--EPSNIKADNSIGYGIVNACVSMGLSDKAHS 174
T+ ++ + R+ + ++ + KL EP NI +S+ G C S +S+ A +
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEP-NIVTLSSLLNGY---CHSKRISE-AVA 172
Query: 175 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 234
++D+M G + ++ N+ +EA L+ + + G Q D+ TY ++
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232
Query: 235 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLME-NHRPELMAAFLDEVVGDPRIEVG 293
D AF+L M + ++ Y TI+ GL + H + + F + R V
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
Query: 294 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWN 353
T ++S+I C GR DA R M + P+ T+ +LI+ +V K L++
Sbjct: 293 T--YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 354 D-VKRKL 359
+ VKR +
Sbjct: 351 EMVKRSI 357
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 175/405 (43%), Gaps = 29/405 (7%)
Query: 12 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVL--- 66
L C C ++ A ++G M LG P +T L GY + ++I++ L
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG-----KRISDAVALVDQ 180
Query: 67 MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYL 126
M E G + ++ LI G + + + R + ++ T+ VV
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV----QRGCQPNLVTYGVVVNGLC 236
Query: 127 RKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSV 186
++G+ NL+N K+E + I+AD I I+++ D A ++ EM G
Sbjct: 237 KRGDTDLALNLLN---KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293
Query: 187 GLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF 246
+ Y ++ C R ++A+ L+ ++ + ++ T++ALI+ + F A L+
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 247 RDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVG-DPRIEVGTHDWNSIIHAF 304
DM + + PD+ +Y +++ G + R + + +V D +V T +N++I F
Sbjct: 354 DDMIKRSIDPDI-FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT--YNTLIKGF 410
Query: 305 CKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGH 364
CK+ R+ED FR M+ + TY +LI G N V +++ SD
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA----QKVFKQMVSD-- 464
Query: 365 KGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
G+ D L + G + A++V + + +I +D + Y
Sbjct: 465 -GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 8/265 (3%)
Query: 77 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 136
V YS+LIS G + LSD K N TF A++ ++++G
Sbjct: 296 VTYSSLISCLCSYGRWSDASQL----LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 137 LINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILK 196
L ++ K +I D +VN DKA + + M + + Y ++K
Sbjct: 352 LYDDMIK---RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408
Query: 197 AYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPD 256
+CK R + T L E+S GL D TY LI+ D +A +F+ M VP
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Query: 257 LKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRT 316
+Y ++ GL N + E D + I++ + + ++I CKAG+++D
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFD-YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Query: 317 FRRMNFLQFEPNDQTYLSLINGYVS 341
F ++ +PN TY ++I+G S
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCS 552
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 112/266 (42%), Gaps = 10/266 (3%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+ P++ NA ++ E + V +AE++ M + PD T+ L + + +K
Sbjct: 326 INPNLVTFNALIDAFVKEGKFV-EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
++ M C V Y+ LI G+ KS + + + R +S + T+
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED-GTELFREMS---HRGLVGDTVTYTT 440
Query: 121 VVKEYLRKGNIKGLANLINE-AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 179
+++ G+ + + P +I + + G+ N G +KA + D M
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN----GKLEKALEVFDYM 496
Query: 180 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 239
+ + +Y +++ CK + + L +S G++ +V TY+ +I S +
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 240 QSAFSLFRDMREARVPDLKGSYLTIM 265
Q A++L + M+E G+Y T++
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 110/284 (38%), Gaps = 15/284 (5%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+ PD+ N+ + G C + + A+++ M + PD +T+ L + E
Sbjct: 361 IDPDIFTYNSLVNGFCMH-DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
EL M G V Y+ LI G G+ + + + +SD D T+
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI----MTYSI 475
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
++ G ++ + + QK S IK D I ++ G D + ++
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQK---SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G + Y ++ C + EA L+ ++ G + TY+ LI + D
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKA 592
Query: 241 SAFSLFRDMREARVPDLKGSYLTIMTGLMEN--HRPELMAAFLD 282
++ L R+MR R G TI GL+ N H L +FLD
Sbjct: 593 ASAELIREMRSCR---FVGDASTI--GLVANMLHDGRLDKSFLD 631
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 174/404 (43%), Gaps = 27/404 (6%)
Query: 12 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLMGE 69
L C C ++ A ++G M LG P +T L GY + K + + + ++ M E
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG-KRISDAVALVDQ-MVE 108
Query: 70 FGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKG 129
G + ++ LI G + + + R + ++ T+ VV ++G
Sbjct: 109 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV----QRGCQPNLVTYGVVVNGLCKRG 164
Query: 130 NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 189
+I NL+N K+E + I+AD I I+++ D A ++ EM G +
Sbjct: 165 DIDLAFNLLN---KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
Query: 190 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 249
Y ++ C R ++A+ L+ ++ + ++ T++ALI+ + F A L DM
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 250 REARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGTHDWNSIIHAFC 305
+ + PD+ +Y +++ G + R + + +V P ++ +N++I FC
Sbjct: 282 IKRSIDPDI-FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT----YNTLIKGFC 336
Query: 306 KAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHK 365
K+ R+ED FR M+ + TY +LI G N V +++ SD
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA----QKVFKQMVSD--- 389
Query: 366 GIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
G+ D L + G + A++V + + +I +D + Y
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 433
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 115/269 (42%), Gaps = 16/269 (5%)
Query: 77 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 136
V YS+LIS G + LSD K N TF A++ ++++G
Sbjct: 221 VTYSSLISCLCSYGRWSDASQL----LSDMIEKKINPNLVTFNALIDAFVKEGKFV---- 272
Query: 137 LINEAQKLEPSNIK----ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYI 192
EA+KL IK D ++N DKA + + M + L Y
Sbjct: 273 ---EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 329
Query: 193 PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 252
++K +CK R + T L E+S GL D TY LI+ D +A +F+ M
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389
Query: 253 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 312
VP +Y ++ GL N + E D + I++ + + ++I CKAG+++D
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFD-YMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 313 ARRTFRRMNFLQFEPNDQTYLSLINGYVS 341
F ++ +PN TY ++I+G S
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 109/284 (38%), Gaps = 15/284 (5%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+ PD+ N+ + G C + + A+++ M + PD T+ L + E
Sbjct: 286 IDPDIFTYNSLINGFCMH-DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
EL M G V Y+ LI G G+ + + + +SD D T+
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI----MTYSI 400
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
++ G ++ + + QK S IK D I ++ G D + ++
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQK---SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G + Y ++ C + EA L+ ++ G D TY+ LI + D
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKA 517
Query: 241 SAFSLFRDMREARVPDLKGSYLTIMTGLMEN--HRPELMAAFLD 282
++ L R+MR R G TI GL+ N H L +FLD
Sbjct: 518 ASAELIREMRSCR---FVGDASTI--GLVANMLHDGRLDKSFLD 556
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 153/372 (41%), Gaps = 22/372 (5%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 61
KP + N + G C V+DA ++ M G +P+E+T+G + + G
Sbjct: 190 KPTLITLNTLVNGLCLN-GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
EL M E V YS +I G K G+L ++ + K + T+ +
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSL----DNAFNLFNEMEIKGFKADIITYNTL 304
Query: 122 VKEYLRKGNIKGLANLINEA--QKLEPSNIKADNSIGYGI-VNACVSMGLSDKAHSILDE 178
+ + G A L+ + +K+ P N + + + +++ V G +A +L E
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISP------NVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 179 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 238
M G + Y ++ +CKENR EA +V + S G D+ T++ LI +
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 239 FQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWN 298
LFR+M V +Y T++ G ++ + E+ E+V R+ +
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS-RRVRPDIVSYK 477
Query: 299 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 358
++ C G LE A F ++ + E + Y+ +I+G +A K +D
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK-------VDDAWDL 530
Query: 359 LSSDGHKGIKFD 370
S KG+K D
Sbjct: 531 FCSLPLKGVKLD 542
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 142/334 (42%), Gaps = 16/334 (4%)
Query: 15 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 74
C C ++ A +G + LG PD + F L ++ + EL M E G
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 75 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 134
+ + L++G +G ++ I R + + T+ V+ + G
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVE----TGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 135 ANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIP 193
L+ +K+E NIK D ++ Y I++ G D A ++ +EM G + Y
Sbjct: 248 MELL---RKMEERNIKLD-AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 194 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 253
++ +C R + L+ ++ + +V T+ LI++ + + A L ++M +
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 254 VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG---DPRIEVGTHDWNSIIHAFCKAGRL 310
+ +Y +++ G + +R E +D ++ DP I +N +I+ +CKA R+
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI----MTFNILINGYCKANRI 419
Query: 311 EDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 344
+D FR M+ N TY +L+ G+ + K
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 105/255 (41%), Gaps = 8/255 (3%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+ P+ N+ ++G C E + +A ++V M + G PD +TF L Y +
Sbjct: 364 IAPNTITYNSLIDGFCKE-NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
EL M G V Y+ L+ G+ +SG L + +S R D ++
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI----VSYKI 478
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
++ G ++ + K+E S ++ D I I++ + D A + +
Sbjct: 479 LLDGLCDNGELEKALEIFG---KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLP 535
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G + Y ++ C+++ ++A IL +++ G D TY+ LI + D
Sbjct: 536 LKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDAT 595
Query: 241 SAFSLFRDMREARVP 255
+A L +M+ + P
Sbjct: 596 TAAELIEEMKSSGFP 610
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 192/465 (41%), Gaps = 104/465 (22%)
Query: 15 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEKINELEVL---MGE 69
C C A V+G + LG PD TF L +KGL + K++E VL M E
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTL-----IKGLFLEGKVSEAVVLVDRMVE 186
Query: 70 FGCSNKKVFYSNLISGYVKSGN-------LASME-----------STILRSLSDEDRKD- 110
GC V Y+++++G +SG+ L ME STI+ SL + D
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 111 --------------------------------WNFGGE---------------TFCAVVK 123
WN G TF ++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 124 EYLRKGNIKGLANLINE--AQKLEPSNIKADNSI--GYGIVNACVSMGLSDKAHSILDEM 179
++++G ++ L E + + P NI N++ GY C+ LS+ A+++LD M
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISP-NIITYNTLMDGY-----CMQNRLSE-ANNMLDLM 359
Query: 180 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 239
S + + ++K YC R + + IS GL + TY L++ S
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 240 QSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWN 298
+ A LF++M +PD+ +Y ++ GL +N + E A + E + ++++G +
Sbjct: 420 KLAEELFQEMVSHGVLPDVM-TYGILLDGLCDNGKLE-KALEIFEDLQKSKMDLGIVMYT 477
Query: 299 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVS--AEKHFNVLMLWNDVK 356
+II CK G++EDA F + +PN TY +I+G + N+L+
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL------ 531
Query: 357 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMK 401
RK+ DG+ +N + A ++ G A+ +++E EMK
Sbjct: 532 RKMEEDGNAPNDCTYN---TLIRAHLRDGDLTASAKLIE---EMK 570
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 137/340 (40%), Gaps = 46/340 (13%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++ DV N ++G C + + + DA + M N G+RPD T
Sbjct: 254 IEADVVIYNTIIDGLC-KYKHMDDALNLFTEMDNKGIRPDVFT----------------- 295
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
YS+LIS G + R LSD + N TF A
Sbjct: 296 ------------------YSSLISCLCNYGRWSDAS----RLLSDMIERKINPNVVTFSA 333
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
++ ++++G + L +E K +I D ++N D+A + + M
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIK---RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
+ + Y ++K +CK R E L E+S GL + TY LI ++D
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 241 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHR-PELMAAFLDEVVGDPRIEVGTHDWNS 299
+A +F+ M V +Y ++ GL +N + + M F E + +E + +N
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF--EYLQRSTMEPDIYTYNI 508
Query: 300 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
+I CKAG++ED F ++ PN Y ++I+G+
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 170/415 (40%), Gaps = 65/415 (15%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEK 59
+PD+ ++ L G C + ++DA +V M +G +PD TF L + GL K
Sbjct: 150 EPDIVTLSSLLNGYC-HSKRISDAVALVDQMVEMGYKPDTFTFTTL-----IHGLFLHNK 203
Query: 60 INELEVL---MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 116
+E L M + GC V Y +++G K
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK---------------------------- 235
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 176
+G+I +L+ +K+E I+AD I I++ D A ++
Sbjct: 236 -----------RGDIDLALSLL---KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 177 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 236
EM+ G + Y ++ C R ++A+ L+ ++ + +V T+ ALI+ +
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 237 QDFQSAFSLFRDMREARV-PDLKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGT 294
A L+ +M + + PD+ +Y +++ G M + E F + D V T
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDI-FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 295 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 354
++++I FCKA R+E+ FR M+ N TY +LI+G+ A N M++
Sbjct: 401 --YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF-- 456
Query: 355 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
K+ +S H I + L+D + K G AM V E + D + Y
Sbjct: 457 -KQMVSVGVHPNILTYNILLD----GLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 152/357 (42%), Gaps = 55/357 (15%)
Query: 55 GLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFG 114
GL +++ ++ + M E Y+ +++GY K GN+ + + + E D +F
Sbjct: 197 GLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV--EAGLDPDFF 254
Query: 115 GETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG--IVNACVSMGLSDKA 172
T+ +++ Y ++ ++ + NE P N + Y I CV+ + D+A
Sbjct: 255 --TYTSLIMGYCQRKDLDSAFKVFNEM----PLKGCRRNEVAYTHLIHGLCVARRI-DEA 307
Query: 173 HSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIET 232
+ +M + Y ++K+ C R +EA LV E+ +G++ ++ TY LI++
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 233 SMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEV 292
S F+ A L M E GLM N
Sbjct: 368 LCSQCKFEKARELLGQMLEK--------------GLMPN--------------------- 392
Query: 293 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 352
+N++I+ +CK G +EDA M + PN +TY LI GY + H + +L
Sbjct: 393 -VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLN 451
Query: 353 NDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
++RK+ D + ++L+D + G FD+A +++ ++ + D+W Y
Sbjct: 452 KMLERKVLPD----VVTYNSLID----GQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 159/363 (43%), Gaps = 30/363 (8%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTF-GFLGYLYAVKGLQEKIN 61
PDV N+ ++G C + A R++ M++ G+ PD+ T+ + L K ++E +
Sbjct: 460 PDVVTYNSLIDGQC-RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
+ L + G + V Y+ LI GY K+G + + + LS K+ TF A+
Sbjct: 519 LFDSL-EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS----KNCLPNSLTFNAL 573
Query: 122 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 181
+ G +K A L+ E K+ ++ S +++ + G D A+S +M +
Sbjct: 574 IHGLCADGKLKE-ATLLEE--KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS 630
Query: 182 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 241
G Y ++ YC+E R +A ++ ++ +G+ D+ TY +LI+
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690
Query: 242 AFSLFRDMREARVPDLKGSYLTIMTGLME-------NHRPELMAA-----------FLDE 283
AF + + MR+ + ++L+++ L+E PEL A L++
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 284 VVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQ-FEPNDQTYLSLINGYVSA 342
+V + + + +I C+ G L A + F M + P++ + +L++
Sbjct: 751 MV-EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 343 EKH 345
+KH
Sbjct: 810 KKH 812
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 155/370 (41%), Gaps = 43/370 (11%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
P++ N + G C +L +V +A + V + G+ PD T+ L Y + + +
Sbjct: 216 PNIYTYNKMVNGYC-KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK 274
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE---DRKDWNFGGETFC 119
+ M GC +V Y++LI G + + ++ DE + + ++ C
Sbjct: 275 VFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 120 A---------VVKEYLRKG---NIKGLANLINE--------------AQKLEPSNIKADN 153
+VKE G NI LI+ Q LE + N
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP--N 392
Query: 154 SIGY-GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVM 212
I Y ++N G+ + A +++ M + S Y ++K YCK N +L
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNK 452
Query: 213 EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMEN 271
+ L DV TY++LI+ S +F SA+ L M + VPD + +Y +++ L ++
Sbjct: 453 MLERKVLP-DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD-QWTYTSMIDSLCKS 510
Query: 272 HRPELMAAFLDEVVG---DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 328
R E D + +P + + + ++I +CKAG++++A +M PN
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVM----YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 329 DQTYLSLING 338
T+ +LI+G
Sbjct: 567 SLTFNALIHG 576
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 133/364 (36%), Gaps = 56/364 (15%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 76
C E ++A +V M G++P+ T+ L + EK EL M E G
Sbjct: 334 CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 77 VFYSNLISGYVKSGNLAS-------MESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKG 129
+ Y+ LI+GY K G + MES R LS R T+ ++K Y K
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMES---RKLSPNTR--------TYNELIKGYC-KS 441
Query: 130 NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 189
N+ ++N K+ + D +++ G D A+ +L MN G
Sbjct: 442 NVHKAMGVLN---KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 190 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 249
Y ++ + CK R EA L + G+ +V Y ALI+ + A + M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 250 REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG---DPRIEVGT------------ 294
++ ++ GL + + + +++V P + T
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 295 -------------------HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSL 335
H + + I +C+ GRL DA +M P+ TY SL
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 336 INGY 339
I GY
Sbjct: 679 IKGY 682
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 168/448 (37%), Gaps = 92/448 (20%)
Query: 24 DAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLI 83
DA RV+ M G+ PD + L + ++ V M E G Y I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 84 SGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA-VVKEYLRKGNI----------- 131
SGY+++ AS + + E R+ + C ++ EY +KG +
Sbjct: 530 SGYIEASEFASADKYV-----KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 132 --------KGLANLINEAQKLEPSNIKADNS----------------IGYGI-VNACVSM 166
K L+N K N K D++ YG+ +N +
Sbjct: 585 DQGILGDAKTYTVLMNGLFK----NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 167 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 226
G KA SI DEM G + + +Y +L +C+ +A L+ E+S GL + TY
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 227 DALIETSMSSQDFQSAFSLFRDMR-EARVPDLKGSYLTIMTG------------------ 267
+I+ S D AF LF +M+ + VPD Y T++ G
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD-SFVYTTLVDGCCRLNDVERAITIFGTNK 759
Query: 268 ----------------LMENHRPELMAAFLDEVVGDPRIEVGTHD---WNSIIHAFCKAG 308
+ + + EL L+ ++ G + +N +I CK G
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 309 RLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIK 368
LE A+ F +M P TY SL+NGY + + ++++ GI+
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI-------AAGIE 872
Query: 369 FDHNLVDAFLYAMVKGGFFDAAMQVVEK 396
DH + + A +K G A+ +V++
Sbjct: 873 PDHIMYSVIINAFLKEGMTTKALVLVDQ 900
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 125/298 (41%), Gaps = 28/298 (9%)
Query: 71 GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGN 130
GC V Y+ LI ++++ +R L ++ K+ + FC
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDA----MRVL--KEMKEQGIAPDIFC-------YNSL 493
Query: 131 IKGL--ANLINEAQKLEPSNIK---ADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGG 184
I GL A ++EA+ ++ N+ YG ++ + A + EM G
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 185 SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFS 244
+ ++ YCK+ + EA + G+ D +TY L+ + A
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 245 LFRDMR-EARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGTHDWNSI 300
+FR+MR + PD+ SY ++ G + + ++ DE+V + P + + +N +
Sbjct: 614 IFREMRGKGIAPDV-FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII----YNML 668
Query: 301 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 358
+ FC++G +E A+ M+ PN TY ++I+GY + L++++K K
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 167 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 226
G+ +KA ++ D M A G Y +++ YC+E + L++E+ + + TY
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420
Query: 227 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 286
+++ SS D A+++ ++M + Y T++ ++N R L E +
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE-MK 479
Query: 287 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 344
+ I +NS+I KA R+++AR M +PN TY + I+GY+ A +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 160/385 (41%), Gaps = 50/385 (12%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLY-----AVKGLQEKINELEVLMGE 69
C+++ + DA+ ++ M +LGV D T+ L G L A KGL + M
Sbjct: 288 CKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE-------MVS 340
Query: 70 FGCSNKKVFYSNLISGYVKSGNL----ASMESTILRSLSDEDRKDWNFGGETFCAVVKEY 125
G + K Y I K G + A + I L + + + ++++ Y
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ--------AQAYASLIEGY 392
Query: 126 LRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGS 185
R+ N++ L+ E +K NI +V S G D A++I+ EM A G
Sbjct: 393 CREKNVRQGYELLVEMKK---RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 186 VGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSL 245
+ +Y ++K + + +R +A ++ E+ G+ D+ Y++LI ++ A S
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 246 FRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD----WNSII 301
+M E + +Y ++G +E E +A D+ V + R E G +I
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEAS--EFASA--DKYVKEMR-ECGVLPNKVLCTGLI 564
Query: 302 HAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSS 361
+ +CK G++ +A +R M + +TY L+NG +K +D +
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK-------VDDAEEIFRE 617
Query: 362 DGHKGIKFDHNLVDAFLYAMVKGGF 386
KGI D F Y ++ GF
Sbjct: 618 MRGKGIA-----PDVFSYGVLINGF 637
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 114/243 (46%), Gaps = 17/243 (6%)
Query: 157 YG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEIS 215
YG I+N MG ++ A ++L +M + +Y I+ CK+ A L E+
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 216 SSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRP 274
G+ DV TY +I++ S + A L RDM E ++ PD+ ++ ++ L++ +
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVV-TFSALINALVKEGK- 161
Query: 275 ELMAAFLDEVVGD---PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 331
+ +E+ GD I T +NS+I FCK RL DA+R M P+ T
Sbjct: 162 ---VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVT 218
Query: 332 YLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAM 391
+ +LINGY A++ N + ++ ++ R +GI + ++ + G DAA
Sbjct: 219 FSTLINGYCKAKRVDNGMEIFCEMHR-------RGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 392 QVV 394
++
Sbjct: 272 DLL 274
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 142/340 (41%), Gaps = 46/340 (13%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++P V N ++ C ++V DA + M N G+RP+ +T
Sbjct: 252 IEPGVVIYNTIIDALC-NYKNVNDALNLFTEMDNKGIRPNVVT----------------- 293
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
Y++LI G + R LSD + N TF A
Sbjct: 294 ------------------YNSLIRCLCNYGRWSDAS----RLLSDMIERKINPNVVTFSA 331
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
++ ++++G + L +E K +I D ++N D+A + + M
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIK---RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
+ + Y ++K +CK R E L E+S GL + TY LI +++
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 241 SAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 299
+A +F+ M + +PD+ +Y ++ GL N + E A + E + ++E + +N
Sbjct: 449 NAQIVFKQMVSDGVLPDIM-TYSILLDGLCNNGKVE-TALVVFEYLQRSKMEPDIYTYNI 506
Query: 300 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
+I CKAG++ED F ++ +PN TY ++++G+
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 175/411 (42%), Gaps = 57/411 (13%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY-LYAVKGLQEKI 60
+PD+ N+ L G C ++DA +VG M +G +PD TF L + L+ E +
Sbjct: 148 EPDIVTLNSLLNGFC-HGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
++ ++ + GC V Y +++G K G++ + ++L+ +
Sbjct: 207 ALVDRMVVK-GCQPDLVTYGIVVNGLCKRGDI-DLALSLLKKM----------------- 247
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
E K+EP + I I++A + + A ++ EM+
Sbjct: 248 -------------------EQGKIEPGVV-----IYNTIIDALCNYKNVNDALNLFTEMD 283
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G + Y +++ C R ++A+ L+ ++ + +V T+ ALI+ +
Sbjct: 284 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343
Query: 241 SAFSLFRDMREARV-PDLKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGTHDWN 298
A L+ +M + + PD+ +Y +++ G M + E F + D V T +N
Sbjct: 344 EAEKLYDEMIKRSIDPDI-FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT--YN 400
Query: 299 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 358
++I FCKA R+++ FR M+ N TY +LI+G+ A + N +++ ++
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF----KQ 456
Query: 359 LSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
+ SD G+ D L + G + A+ V E K+ D + Y
Sbjct: 457 MVSD---GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 134/332 (40%), Gaps = 23/332 (6%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++P+V N+ + C C +DA R++ M + P+ +TF L + +G K+
Sbjct: 287 IRPNVVTYNSLIR-CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG---KL 342
Query: 61 NELEVLMGEF--GCSNKKVF-YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET 117
E E L E + +F YS+LI+G+ L + +S KD T
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS----KDCFPNVVT 398
Query: 118 FCAVVKEYLRKGNIKGLANLINE-AQKLEPSNIKADNSIGYGIVNA--CVSMGLSDKAHS 174
+ ++K + + + L E +Q+ N ++ +G A C D A
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC------DNAQI 452
Query: 175 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 234
+ +M + G + Y +L C + A ++ + S ++ D+ TY+ +IE
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512
Query: 235 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD-PRIEVG 293
+ + + LF + V +Y T+M+G E A E+ + P + G
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Query: 294 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQF 325
T +N++I A + G + R M +F
Sbjct: 573 T--YNTLIRAHLRDGDKAASAELIREMRSCRF 602
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 156/359 (43%), Gaps = 13/359 (3%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTF-GFLGYLYAVKGLQEKI 60
+PD + + G C V+DA +V M +G +PD + + + L K + +
Sbjct: 152 EPDRVTIGSLVNGFC-RRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
+ + + + G V Y+ L++G S S S R LSD +K T+ A
Sbjct: 211 DFFKEIERK-GIRPNVVTYTALVNGLCNS----SRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
++ +++ G + L E ++ +I D ++N D+A+ + D M
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRM---SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
+ G + Y ++ +CK R + L E+S GL + TY+ LI+ + D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 241 SAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 299
A F M + PD+ +Y ++ GL +N E A + E + +++ + +
Sbjct: 383 KAQEFFSQMDFFGISPDI-WTYNILLGGLCDNGELE-KALVIFEDMQKREMDLDIVTYTT 440
Query: 300 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 358
+I CK G++E+A F ++ +P+ TY ++++G + V L+ +K++
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 136/347 (39%), Gaps = 51/347 (14%)
Query: 15 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 74
CCC V+ A ++G M LG PD +T G L + + L M E G
Sbjct: 131 CCCF--QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 75 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 134
V Y+ +I K+ + + + +RK T+ A+V
Sbjct: 189 DIVAYNAIIDSLCKTKRV----NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 135 ANLINE--AQKLEPSNIKADNSIGY-GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVY 191
A L+++ +K+ P N I Y +++A V G +A + +EM + + Y
Sbjct: 245 ARLLSDMIKKKITP------NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 192 IPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE 251
++ C +R EA + + S G DV +Y+ LI ++ + LFR+M +
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 252 ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLE 311
GL+ N T +N++I F +AG ++
Sbjct: 359 --------------RGLVSN----------------------TVTYNTLIQGFFQAGDVD 382
Query: 312 DARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 358
A+ F +M+F P+ TY L+ G + L+++ D++++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 138/349 (39%), Gaps = 60/349 (17%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG--LQEK 59
+PD+ ++ L G C + ++DA +V M +G +PD TF L + G L K
Sbjct: 150 EPDIVTLSSLLNGYC-HSKRISDAVALVDQMVEMGYKPDTFTFTTL-----IHGLFLHNK 203
Query: 60 INELEVL---MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 116
+E L M + GC V Y +++G K
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK---------------------------- 235
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 176
+G+I NL+N K+E + IKA+ I I+++ + A +
Sbjct: 236 -----------RGDIDLALNLLN---KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 177 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 236
EM G + Y ++ C R ++A+ L+ + + +V T++ALI+
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 237 QDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD--PRIEVG 293
A L +M + + PD L I M N E F V D P I+
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT- 400
Query: 294 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 342
+N++I+ FCK R+ED FR M+ N TY ++I G+ A
Sbjct: 401 ---YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 16/238 (6%)
Query: 155 IGYG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVME 213
+ YG +VN G D A ++L++M A + ++ I+ + CK A L E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 214 ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENH 272
+ + G++ +V TY++LI + + A L +M E ++ P++ I E
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 273 RPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 332
E A L E + I+ T +N +I+ FC RL++A++ F+ M PN QTY
Sbjct: 344 LVE--AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 333 LSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAA 390
+LING+ ++ + + L+ R++S G G + Y + GFF A
Sbjct: 402 NTLINGFCKCKRVEDGVELF----REMSQRGLVG--------NTVTYTTIIQGFFQAG 447
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 128/291 (43%), Gaps = 23/291 (7%)
Query: 77 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 136
V Y++LI+ G + R LS+ K N TF A++ + ++G +
Sbjct: 294 VTYNSLINCLCNYGRWSDAS----RLLSNMLEKKINPNVVTFNALIDAFFKEGKLV---- 345
Query: 137 LINEAQKLEPSNIKAD---NSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYI 192
EA+KL I+ ++I Y + +N D+A + M + + Y
Sbjct: 346 ---EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYN 402
Query: 193 PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 252
++ +CK R + L E+S GL + TY +I+ + D SA +F+ M
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Query: 253 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 312
RVP +Y ++ GL + + A + + + +E+ +N++I CKAG++ +
Sbjct: 463 RVPTDIMTYSILLHGLCSYGKLD-TALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 313 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG 363
A F L +P+ TY ++I+G S +L +D+ RK+ DG
Sbjct: 522 AWDLFCS---LSIKPDVVTYNTMISGLCSKR----LLQEADDLFRKMKEDG 565
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 156/389 (40%), Gaps = 68/389 (17%)
Query: 1 MKPDVAACNAALEGCCCELES--VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG-LQ 57
+KP++ CN L G S ++ A V M +GV + TF L Y ++G L+
Sbjct: 162 LKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLE 221
Query: 58 EKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSD---EDRKDWNFG 114
+ + LE ++ EF + V Y+ ++ K G L+ ++ +L + +R +N
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281
Query: 115 GETFCAV--------VKEYLRKGN-----------IKGLANLINEAQKLEPSN------I 149
+C + + E +++ N I GL N + + LE + +
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKL 341
Query: 150 KADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 209
+ D +++ C +GLS +A ++++M G + LK CKE + T
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTR 401
Query: 210 LVME-ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 268
V E + G D+ TY LI+ + D A + R+M
Sbjct: 402 KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM------------------- 442
Query: 269 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 328
G I++ T N+I+ A CK +L++A + F +
Sbjct: 443 -----------------GQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 485
Query: 329 DQTYLSLINGYVSAEKHFNVLMLWNDVKR 357
+ TY +LI G+ EK L +W+++K+
Sbjct: 486 EVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 151/344 (43%), Gaps = 23/344 (6%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGF-LGYLYAVKGLQEK 59
++PDV N ++GC EL +A +++ M N GV+ +++T L +L + +
Sbjct: 341 LQPDVVTYNTLIDGCF-ELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAV 399
Query: 60 INELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFC 119
+++ L+ G S V Y LI Y+K G+L S L + + +K T
Sbjct: 400 TRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL----SGALEMMREMGQKGIKMNTITLN 455
Query: 120 AVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGL-----SDKAHS 174
++ ++ + NL+N A K D + YG + MG +KA
Sbjct: 456 TILDALCKERKLDEAHNLLNSAHK---RGFIVD-EVTYGTL----IMGFFREEKVEKALE 507
Query: 175 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 234
+ DEM + + + + ++ C +T A E++ SGL D T++++I
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Query: 235 SSQDFQSAFSLFRD-MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVG 293
+ AF + + ++ + PD + ++ GL + E F + ++ + EV
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNI-LLNGLCKEGMTEKALNFFNTLIEER--EVD 624
Query: 294 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 337
T +N++I AFCK +L++A M EP+ TY S I+
Sbjct: 625 TVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 134/327 (40%), Gaps = 17/327 (5%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 76
C+L S+ +A ++V M V PD T+ L G + EL M
Sbjct: 286 CKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDV 345
Query: 77 VFYSNLISGYVKSGNLASMESTILRSLSDED-----RKDWNFGGETFCAVVKEYLRKGNI 131
V Y+ LI G + G S+E+ L + D + N + C KE R+
Sbjct: 346 VTYNTLIDGCFELG--LSLEARKLMEQMENDGVKANQVTHNISLKWLC---KEEKREAVT 400
Query: 132 KGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVY 191
+ + L++ D + ++ A + +G A ++ EM G +
Sbjct: 401 RKVKELVDM------HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITL 454
Query: 192 IPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE 251
IL A CKE + EA L+ G +D TY LI + + A ++ +M++
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 252 ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLE 311
++ ++ +++ GL + + EL DE + + + +NSII +CK GR+E
Sbjct: 515 VKITPTVSTFNSLIGGLCHHGKTELAMEKFDE-LAESGLLPDDSTFNSIILGYCKEGRVE 573
Query: 312 DARRTFRRMNFLQFEPNDQTYLSLING 338
A + F+P++ T L+NG
Sbjct: 574 KAFEFYNESIKHSFKPDNYTCNILLNG 600
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 174/405 (42%), Gaps = 29/405 (7%)
Query: 12 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLMGE 69
L C C + A V+G M LG PD +T L GY + ++I+E L+ +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG-----KRISEAVALVDQ 175
Query: 70 FGC---SNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYL 126
V ++ LI G + + I R ++ + D T+ VV
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF----TYGTVVNGLC 231
Query: 127 RKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSV 186
++G+I +L+ +K+E I+AD I I++A + + A ++ EM+ G
Sbjct: 232 KRGDIDLALSLL---KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 187 GLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF 246
+ Y +++ C R ++A+ L+ ++ + +V T+ ALI+ + A L+
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 247 RDMREARV-PDLKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAF 304
+M + + PD+ +Y +++ G M + E F + D V T +N++I F
Sbjct: 349 DEMIKRSIDPDI-FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT--YNTLIKGF 405
Query: 305 CKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGH 364
CKA R+E+ FR M+ N TY +LI G A + + +K+ SD
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD----CDMAQKIFKKMVSD-- 459
Query: 365 KGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
G+ D L + K G + A+ V E + K+ D + Y
Sbjct: 460 -GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 131/323 (40%), Gaps = 43/323 (13%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 76
C ++V DA + M N G+RP+ +T
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVT--------------------------------- 292
Query: 77 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 136
Y++LI G + R LSD + N TF A++ ++++G +
Sbjct: 293 --YNSLIRCLCNYGRWSDAS----RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 137 LINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILK 196
L +E K +I D ++N D+A + + M + + Y ++K
Sbjct: 347 LYDEMIK---RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 197 AYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPD 256
+CK R E L E+S GL + TY+ LI+ + D A +F+ M VP
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 257 LKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRT 316
+Y ++ GL + + E A + E + ++E + +N +I CKAG++ED
Sbjct: 464 DIITYSILLDGLCKYGKLE-KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 317 FRRMNFLQFEPNDQTYLSLINGY 339
F ++ +PN Y ++I+G+
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGF 545
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 157/377 (41%), Gaps = 42/377 (11%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY-LYAVKGLQEKI 60
+PD+ ++ L G C + +++A +V M + +P+ +TF L + L+ E +
Sbjct: 147 EPDIVTLSSLLNGYC-HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGN-------LASME-----------STILRS 102
++ ++ GC Y +++G K G+ L ME +TI+ +
Sbjct: 206 ALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 103 L-------------SDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA--QKLEPS 147
L ++ D K T+ ++++ G + L+++ +K+ P+
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Query: 148 NIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEA 207
+ +++A V G +A + DEM + Y ++ +C +R EA
Sbjct: 325 VVTFS-----ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 208 TILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTG 267
+ + S +V TY+ LI+ ++ + LFR+M + + +Y T++ G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 268 LMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEP 327
L + ++ ++V D + ++ ++ CK G+LE A F + + EP
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 328 NDQTYLSLINGYVSAEK 344
+ TY +I G A K
Sbjct: 499 DIYTYNIMIEGMCKAGK 515
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 171/404 (42%), Gaps = 27/404 (6%)
Query: 12 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVL--- 66
L C C ++ A ++G M LG PD +T L G+ + +I++ L
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG-----NRISDAVALVDQ 173
Query: 67 MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYL 126
M E G V ++ LI G + + I R + + D T+ AVV
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDL----VTYGAVVNGLC 229
Query: 127 RKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSV 186
++G+ NL+N K+E + I+A+ I ++++ D A ++ EM G
Sbjct: 230 KRGDTDLALNLLN---KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 187 GLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF 246
+ Y ++ C R ++A+ L+ ++ + ++ T+ ALI+ + A L+
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 247 RDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV-GDPRIEVGTHDWNSIIHAFC 305
+M + + +Y +++ G R L+ ++ D V T +N++I+ FC
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT--YNTLINGFC 404
Query: 306 KAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHK 365
KA R++ FR M+ N TY +LI+G+ A N M++ K+ +S H
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF---KQMVSVGVHP 461
Query: 366 GIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
I + L+D + K G AM V E + D + Y
Sbjct: 462 NILTYNILLD----GLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 152/385 (39%), Gaps = 58/385 (15%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEK 59
+PD+ N+ L G C ++DA +V M +G +PD +TF L + GL K
Sbjct: 145 EPDIVTLNSLLNGFC-HGNRISDAVALVDQMVEMGYKPDTVTFTTL-----IHGLFLHNK 198
Query: 60 INELEVL---MGEFGCSNKKVFYSNLISGYVKSGN-------LASME-----------ST 98
+E L M + GC V Y +++G K G+ L ME ST
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 99 ILRSLSDEDRKD--WNFGGE-----------TFCAVVKEYLRKGNIKGLANLINEA--QK 143
++ SL +D N E T+ +++ G + L+++ +K
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 144 LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENR 203
+ P+ + +++A V G KA + +EM + Y ++ +C +R
Sbjct: 319 INPNLVTFS-----ALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDR 373
Query: 204 TAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLT 263
EA ++ + +V TY+ LI ++ LFR+M + + +Y T
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 433
Query: 264 IMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD----WNSIIHAFCKAGRLEDARRTFRR 319
++ G + + ++V VG H +N ++ CK G+L A F
Sbjct: 434 LIHGFFQARDCDNAQMVFKQMV-----SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 488
Query: 320 MNFLQFEPNDQTYLSLINGYVSAEK 344
+ EP+ TY +I G A K
Sbjct: 489 LQRSTMEPDIYTYNIMIEGMCKAGK 513
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 138/338 (40%), Gaps = 9/338 (2%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 61
+PD+ + L G C + DA + + +G +P+ +T+ L
Sbjct: 150 EPDLVTFTSLLNGYC-HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
EL MG G V Y+ L++G + G + +LR D ++ TF A+
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD-AAWLLR---DMMKRRIEPNVITFTAL 264
Query: 122 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 181
+ +++ G + L N ++ ++ D ++N GL D+A + M
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQM---SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 182 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 241
G +Y ++ +CK R + + E+S G+ + TY LI+
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 242 AFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSII 301
A +F M R P +Y ++ GL N + E A + E + +++ + II
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE-KALMIFEYMRKREMDINIVTYTIII 440
Query: 302 HAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
CK G++EDA F + +PN TY ++I+G+
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 159 IVNACVSMGLSD-KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS 217
IV CV + +A L +M LG L + +L YC NR +A L +I
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 218 GLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPEL 276
G + +V TY LI ++ A LF M P++ +Y ++TGL E R
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV-TYNALVTGLCEIGRWGD 241
Query: 277 MAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
A L +++ RIE + ++I AF K G+L +A+ + M + P+ TY SLI
Sbjct: 242 AAWLLRDMMKR-RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 337 NG 338
NG
Sbjct: 301 NG 302
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 10/252 (3%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++P+V A ++ ++ + +A+ + M + V PD T+G L + GL ++
Sbjct: 254 IEPNVITFTALIDAFV-KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
++ LM GC +V Y+ LI G+ KS + ++ + +K T+
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG----MKIFYEMSQKGVVANTITYTV 368
Query: 121 VVKEYLRKGNIKGLANLINE-AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 179
+++ Y G + N+ + + P +I+ N + G+ C + G +KA I + M
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL---CCN-GKVEKALMIFEYM 424
Query: 180 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 239
+ + Y I++ CK + +A L + S G++ +V TY +I
Sbjct: 425 RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLI 484
Query: 240 QSAFSLFRDMRE 251
A SLF+ M+E
Sbjct: 485 HEADSLFKKMKE 496
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 146/362 (40%), Gaps = 20/362 (5%)
Query: 4 DVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINEL 63
D+ CN L C C+ A +G M LG PD +TF L + + E+ +
Sbjct: 106 DLYTCNL-LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSM 164
Query: 64 EVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET----FC 119
M E G V Y+ +I K+G++ +LS D+ + N+G +
Sbjct: 165 VNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY-------ALSLFDQME-NYGIRPDVVMYT 216
Query: 120 AVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 179
++V G + +L+ K IK D +++A V G A + +EM
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTK---RKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 180 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 239
+ + + Y ++ +C E EA + + + G DV Y +LI +
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 240 QSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 299
A +F +M + + +Y T++ G + +P + +V + +N
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG-VPPNIRTYNV 392
Query: 300 IIHAFCKAGRLEDARRTFRRMNFLQFE---PNDQTYLSLINGYVSAEKHFNVLMLWNDVK 356
++H C G+++ A F M + + PN TY L++G K LM++ D++
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Query: 357 RK 358
++
Sbjct: 453 KR 454
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 141/375 (37%), Gaps = 47/375 (12%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 61
+PD+ + + G C + +A +V M +G++PD + + + G
Sbjct: 139 EPDIVTFTSLINGFCLG-NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
L M +G V Y++L++G SG +S +LR ++ K TF A+
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS-LLRGMTKRKIKP---DVITFNAL 253
Query: 122 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACVSMGLSDKAHSILDEMN 180
+ ++++G L NE ++ A N Y ++N G D+A + M
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSI----APNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G + Y ++ +CK + +A + E+S GL + TY LI+
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 241 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDW--N 298
A +F M VP +Y ++ L N + + +++ V + W N
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 299 SIIHAFC-----------------------------------KAGRLEDARRTFRRMNFL 323
++H C KAG++++A F +
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 324 QFEPNDQTYLSLING 338
+PN TY ++I+G
Sbjct: 490 GVKPNVVTYTTMISG 504
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 189/458 (41%), Gaps = 58/458 (12%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
PDV ACN+ L + + DA +V M + G D + L VKG+ NE
Sbjct: 168 PDVIACNSLL-SLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCIL-----VKGM---CNE 218
Query: 63 LEVLMGEF--------GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFG 114
+V +G GC VFY+ +I GY K G++ + + + L K +
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIEN-AYLVFKELK---LKGFMPT 274
Query: 115 GETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLS-DKAH 173
ETF ++ + ++G+ L++E ++ ++ I++A G D A
Sbjct: 275 LETFGTMINGFCKEGDFVASDRLLSEVKE---RGLRVSVWFLNNIIDAKYRHGYKVDPAE 331
Query: 174 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 233
SI + A + Y ++ CKE + A + E S GL + +Y LI+
Sbjct: 332 SI-GWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAY 390
Query: 234 MSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVG------ 286
S+++ A L M E PD+ +Y ++ GL +++ +D+ V
Sbjct: 391 CKSKEYDIASKLLLQMAERGCKPDIV-TYGILIHGL-------VVSGHMDDAVNMKVKLI 442
Query: 287 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHF 346
D + +N ++ CK GR A+ F M P+ Y +LI+G++ +
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGD-- 500
Query: 347 NVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDK 406
+++ ++ S KG+K D +A + + G D A+ + + +E + DK
Sbjct: 501 -----FDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555
Query: 407 WRY--------KQAFMETHKKLKVAKLRKRNTKKMEAV 436
+ Y KQ M T +K+ + ++N K V
Sbjct: 556 FTYSTIIDGYVKQQDMAT--AIKIFRYMEKNKCKPNVV 591
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 128/341 (37%), Gaps = 56/341 (16%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTM---SNLGVRPDELTFGFLGYLYAVKGLQE 58
KPDVA N + C E E VG + S G+ P+ L++ L Y +
Sbjct: 342 KPDVATYNILINRLCKE----GKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397
Query: 59 KINELEVLMGEFGCSNKKVFYSNLISGYVKSGNL---ASMESTILRSLSDEDRKDWNFGG 115
++L + M E GC V Y LI G V SG++ +M+ ++ D +N
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457
Query: 116 ETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSI 175
C + G L +E + NI D + +++ + G D+A +
Sbjct: 458 SGLC-------KTGRFLPAKLLFSE---MLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Query: 176 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 235
G V + + ++K +C+ EA + ++ L D TY +I+ +
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Query: 236 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 295
QD +A +FR M + + +P ++
Sbjct: 568 QQDMATAIKIFRYMEKNKC------------------KPNVVT----------------- 592
Query: 296 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
+ S+I+ FC G + A TF+ M PN TY +LI
Sbjct: 593 -YTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 149/348 (42%), Gaps = 31/348 (8%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL---QE 58
+P + + L G C + +A +V +M G P+ + Y + GL ++
Sbjct: 146 RPSIVTLGSLLNGFC-QGNRFQEAVSLVDSMDGFGFVPNVVI-----YNTVINGLCKNRD 199
Query: 59 KINELEVLMGEFGCSNKK------VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWN 112
N LEV F C KK V Y+ LISG SG R L D ++ +
Sbjct: 200 LNNALEV----FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA----RLLRDMVKRKID 251
Query: 113 FGGETFCAVVKEYLRKGNIKGLANLINEA-QKLEPSNIKADNSIGYGIVNACVSMGLSDK 171
F A++ ++++GN+ NL E ++ N+ NS+ G C+ L D
Sbjct: 252 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF---CIHGCLGD- 307
Query: 172 AHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 231
A + D M + G + Y ++ +CK R + L E++ GL D TY+ LI
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 232 TSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRI 290
+ A +F M + V PD+ +Y ++ L N + E A + E + +
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIV-TYNILLDCLCNNGKIE-KALVMVEDLQKSEM 425
Query: 291 EVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 338
+V +N II C+ +L++A FR + +P+ Y+++I+G
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 140/351 (39%), Gaps = 59/351 (16%)
Query: 15 CCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLMGEFGC 72
C C ++ A ++G M LG RP +T G L G+ + QE ++ ++ + G FG
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR-FQEAVSLVDSMDG-FGF 180
Query: 73 SNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIK 132
V Y+ +I+G K+ +D N E F
Sbjct: 181 VPNVVIYNTVINGLCKN-------------------RDLNNALEVFYC------------ 209
Query: 133 GLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYI 192
+E I+AD +++ + G A +L +M + +
Sbjct: 210 -----------MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 193 PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-RE 251
++ + KE EA L E+ + +V TY++LI A +F M +
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 252 ARVPDLKGSYLTIMTGLMENHRPELMAAFLDE-----VVGDPRIEVGTHDWNSIIHAFCK 306
PD+ +Y T++TG ++ R E E +VGD +N++IH +C+
Sbjct: 319 GCFPDVV-TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD------AFTYNTLIHGYCQ 371
Query: 307 AGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKR 357
AG+L A++ F RM P+ TY L++ + K L++ D+++
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 10/227 (4%)
Query: 171 KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALI 230
+A S++D M+ G + +Y ++ CK A + + G++ D TY+ LI
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 231 ETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR 289
+S + A L RDM + ++ P++ I T + E + E + + +
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 290 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVL 349
V T +NS+I+ FC G L DA+ F M P+ TY +LI G+ +++ + +
Sbjct: 287 PNVFT--YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 350 MLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEK 396
L+ + ++ G G F +N ++ + G + A +V +
Sbjct: 345 KLFCE----MTYQGLVGDAFTYN---TLIHGYCQAGKLNVAQKVFNR 384
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 155/358 (43%), Gaps = 30/358 (8%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN-- 74
C+ + DA ++ +M+ PD +++ L + Y G K E +L + +
Sbjct: 354 CDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMG---KFVEASLLFDDLRAGDIH 406
Query: 75 -KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE-TFCAVVKEYLRKGNIK 132
V Y+ LI G +SGNL + L +E F T+ +VK +++ GN+
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQR-----LKEEMTTQLIFPDVITYTTLVKGFVKNGNLS 461
Query: 133 GLANLINEAQKLEPSNIKADNSIGYGIVNACVS---MGLSDKAHSILDEMNALGG-SVGL 188
+ +E + IK D GY V +G SDKA + +EM A + L
Sbjct: 462 MATEVYDEMLR---KGIKPD---GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDL 515
Query: 189 GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 248
+Y + CK +A +I GL D TY +I + + F+ A +L+ +
Sbjct: 516 TIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE 575
Query: 249 MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD-PRIEVGTHDWNSIIHAFCKA 307
M R+ +Y ++ G + R E + E+ R V TH N++++ CKA
Sbjct: 576 MLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTH--NALLYGMCKA 633
Query: 308 GRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND-VKRKLSSDGH 364
G +++A R +M PN +Y LI+ EK V+ L+ + + +++ DG+
Sbjct: 634 GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGY 691
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 171/443 (38%), Gaps = 56/443 (12%)
Query: 3 PDVAACNAALEGC--CCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
P V N L+ C +LE V +++ M + E+T+ L ++ G E+
Sbjct: 236 PTVITFNTMLDSCFKAGDLERV---DKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
M G + ++ LI GY K G L D+ W E A
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQG------------LFDD---AWGVTDEMLNA 337
Query: 121 VVKEYLRKGNIKGLA----NLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSI 175
+ NI A I++A++L S++ A + + Y +++ + MG +A +
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDAREL-LSSMAAPDVVSYNTLMHGYIKMGKFVEASLL 396
Query: 176 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 235
D++ A + Y ++ C+ A L E+++ + DV TY L++ +
Sbjct: 397 FDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVK 456
Query: 236 SQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 294
+ + A ++ +M R+ PD +Y T G + + +E+V
Sbjct: 457 NGNLSMATEVYDEMLRKGIKPD-GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDL 515
Query: 295 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 354
+N I CK G L A R++ + P+ TY ++I GY+ + L+++
Sbjct: 516 TIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE 575
Query: 355 VKRK----------LSSDGH------------------KGIKFDHNLVDAFLYAMVKGGF 386
+ RK + GH +G++ + +A LY M K G
Sbjct: 576 MLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGN 635
Query: 387 FDAAMQVVEKSHEMKIFVDKWRY 409
D A + + K E I +K+ Y
Sbjct: 636 IDEAYRYLCKMEEEGIPPNKYSY 658
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 137/332 (41%), Gaps = 45/332 (13%)
Query: 5 VAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELE 64
+ +CN L+G ++ + A R++ + + G P+ +TF L + +G ++ +L
Sbjct: 252 IVSCNKVLKGL--SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLF 309
Query: 65 VLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 124
+M + G + YS LI GY K+G L G + F +
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLG-------------------MGHKLF----SQ 346
Query: 125 YLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGG 184
L KG +K D + ++ V G A + M G
Sbjct: 347 ALHKG-------------------VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 185 SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFS 244
S + Y ++K C++ R EA + +I G++ + TY +LI+ + +S F+
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 245 LFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAF 304
L+ DM + P Y ++ GL + F +++G I + +NS+I +
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ-SIRLNVVVFNSLIDGW 506
Query: 305 CKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
C+ R ++A + FR M +P+ T+ +++
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 143/338 (42%), Gaps = 27/338 (7%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++ +V N+ ++G C L +A +V M G++PD TF + + ++G E+
Sbjct: 492 IRLNVVVFNSLIDGWC-RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
L M + G + Y LI + K M+ TI L D +++ C
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKH-----MKPTIGLQLFDLMQRNKISADIAVCN 605
Query: 121 VVKEYLRKGN-----IKGLANLINEAQKLEPSNIKADNSI-GYGIVNACVSMGLSDKAHS 174
VV L K + K NLI K+EP + + I GY S+ D+A
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIE--GKMEPDIVTYNTMICGY------CSLRRLDEAER 657
Query: 175 ILD--EMNALG-GSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 231
I + ++ G +V L + I +L CK N A + ++ G + + TY L++
Sbjct: 658 IFELLKVTPFGPNTVTLTILIHVL---CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 714
Query: 232 TSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIE 291
S D + +F LF +M+E + SY I+ GL + R + + + D ++
Sbjct: 715 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI-DAKLL 773
Query: 292 VGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPND 329
+ +I +CK GRL +A + M +P+D
Sbjct: 774 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 126/307 (41%), Gaps = 18/307 (5%)
Query: 36 GVRPDELTFGFLGYLYAVKGLQE--KINELEVLMGEF---GCSNKKVFYSNLISGYVKSG 90
G+ P+ +T+ L +KGL + +I E + G+ G V YS+LI G+ K G
Sbjct: 386 GISPNVVTYTIL-----IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 91 NLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 150
NL S + + D G + K+ L ++ ++ ++ +L N+
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL---NVV 497
Query: 151 ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATIL 210
NS+ ++ + D+A + M G + + +++ E R EA L
Sbjct: 498 VFNSL----IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFL 553
Query: 211 VMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLME 270
+ GL+ D Y LI+ LF M+ ++ ++ L +
Sbjct: 554 FFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 271 NHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQ 330
HR E + F + ++ + ++E +N++I +C RL++A R F + F PN
Sbjct: 614 CHRIEDASKFFNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 672
Query: 331 TYLSLIN 337
T LI+
Sbjct: 673 TLTILIH 679
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 179/422 (42%), Gaps = 26/422 (6%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+K V + +EG C E V +++++ S G++P+ T+ + Y + +
Sbjct: 220 VKITVYSLTIVVEGLCRRGE-VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDR-KDWNFGGETFC 119
+ +M + G KV Y+ L+ VK+G ++ E L DE R + +
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEK-----LFDEMRERGIESDVHVYT 333
Query: 120 AVVKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYG-IVNACVSMGLSDKAHSIL 176
+++ RKGN+K L +E + L PS S YG +++ +G A ++
Sbjct: 334 SLISWNCRKGNMKRAFLLFDELTEKGLSPS------SYTYGALIDGVCKVGEMGAAEILM 387
Query: 177 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 236
+EM + G ++ V+ ++ YC++ EA+++ + G Q DV T + +
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL 447
Query: 237 QDFQSAFSLFRDMREARVPDLKGSYLTIM-TGLMENHRPELMAAFLDEVVGDPRIEVGTH 295
+ + A M E V SY ++ E + E F++ + ++
Sbjct: 448 KRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVE--MSSKGVQPNAI 505
Query: 296 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 355
+N +I+A+CK G++++AR+ M +P+ TY SLI+G A+ NV ++
Sbjct: 506 TYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD---NV----DEA 558
Query: 356 KRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFME 415
R S G KG+ + + + K G D A + ++ +D Y
Sbjct: 559 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Query: 416 TH 417
H
Sbjct: 619 MH 620
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 163/391 (41%), Gaps = 26/391 (6%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTM--SNLGVRPDELTFGFLGYLYAVKGLQE 58
++PD N + C +L + A + +M RPD +TF + +LY+VKG E
Sbjct: 279 VRPDTTTFNIIIY-CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 337
Query: 59 KINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 118
+ M G V Y+ L+ Y G M T L L D + ++
Sbjct: 338 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG----MSGTALSVLGDIKQNGIIPDVVSY 393
Query: 119 CAVVKEYLR---KGNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACVSMGLSDKAHS 174
++ Y R G K + L+ ++ +P N + Y +++A S G +A
Sbjct: 394 TCLLNSYGRSRQPGKAKEVF-LMMRKERRKP------NVVTYNALIDAYGSNGFLAEAVE 446
Query: 175 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 234
I +M G + +L A + + ++ S G+ L+ Y++ I + +
Sbjct: 447 IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYI 506
Query: 235 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 294
++ + + A +L++ MR+ +V ++ +++G + ++L E+ D I +
Sbjct: 507 NAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM-EDLSIPLTK 565
Query: 295 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 354
++S++ A+ K G++ +A F +M EP+ Y S+++ Y ++EK W
Sbjct: 566 EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEK-------WGK 618
Query: 355 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGG 385
GI+ D A + A KGG
Sbjct: 619 ACELFLEMEANGIEPDSIACSALMRAFNKGG 649
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 138/340 (40%), Gaps = 19/340 (5%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 61
KP+V NA ++ + +A + M G++P+ ++ L L A ++K+N
Sbjct: 422 KPNVVTYNALIDAYGSN-GFLAEAVEIFRQMEQDGIKPNVVSVCTL--LAACSRSKKKVN 478
Query: 62 ELEVLMG--EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFC 119
VL G + Y++ I Y+ N A +E I S +K TF
Sbjct: 479 VDTVLSAAQSRGINLNTAAYNSAIGSYI---NAAELEKAIALYQSMRKKKV-KADSVTFT 534
Query: 120 AVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 179
++ R + I+ +++E +I + ++ A G +A SI ++M
Sbjct: 535 ILISGSCR---MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Query: 180 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 239
G + Y +L AY + +A L +E+ ++G++ D AL+
Sbjct: 592 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 651
Query: 240 QSAFSLFRDMREARVPDLKGSYLTIMTG---LMENHRPELMAAFLDEVVGDPRIEVGTHD 296
+ F L MRE +P + I + L E R + +D + P + +G
Sbjct: 652 SNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYL--PSLSIGLT- 708
Query: 297 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
N ++H F K+G++E + F ++ N +TY L+
Sbjct: 709 -NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 747
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 163/391 (41%), Gaps = 26/391 (6%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTM--SNLGVRPDELTFGFLGYLYAVKGLQE 58
++PD N + C +L + A + +M RPD +TF + +LY+VKG E
Sbjct: 147 VRPDTTTFNIIIY-CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 205
Query: 59 KINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 118
+ M G V Y+ L+ Y G M T L L D + ++
Sbjct: 206 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG----MSGTALSVLGDIKQNGIIPDVVSY 261
Query: 119 CAVVKEYLR---KGNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACVSMGLSDKAHS 174
++ Y R G K + L+ ++ +P N + Y +++A S G +A
Sbjct: 262 TCLLNSYGRSRQPGKAKEVF-LMMRKERRKP------NVVTYNALIDAYGSNGFLAEAVE 314
Query: 175 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 234
I +M G + +L A + + ++ S G+ L+ Y++ I + +
Sbjct: 315 IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYI 374
Query: 235 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 294
++ + + A +L++ MR+ +V ++ +++G + ++L E+ D I +
Sbjct: 375 NAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM-EDLSIPLTK 433
Query: 295 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 354
++S++ A+ K G++ +A F +M EP+ Y S+++ Y ++EK W
Sbjct: 434 EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEK-------WGK 486
Query: 355 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGG 385
GI+ D A + A KGG
Sbjct: 487 ACELFLEMEANGIEPDSIACSALMRAFNKGG 517
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 138/340 (40%), Gaps = 19/340 (5%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 61
KP+V NA ++ + +A + M G++P+ ++ L L A ++K+N
Sbjct: 290 KPNVVTYNALIDAYGSN-GFLAEAVEIFRQMEQDGIKPNVVSVCTL--LAACSRSKKKVN 346
Query: 62 ELEVLMG--EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFC 119
VL G + Y++ I Y+ N A +E I S +K TF
Sbjct: 347 VDTVLSAAQSRGINLNTAAYNSAIGSYI---NAAELEKAIALYQSMRKKKV-KADSVTFT 402
Query: 120 AVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 179
++ R + I+ +++E +I + ++ A G +A SI ++M
Sbjct: 403 ILISGSCR---MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Query: 180 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 239
G + Y +L AY + +A L +E+ ++G++ D AL+
Sbjct: 460 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 519
Query: 240 QSAFSLFRDMREARVPDLKGSYLTIMTG---LMENHRPELMAAFLDEVVGDPRIEVGTHD 296
+ F L MRE +P + I + L E R + +D + P + +G
Sbjct: 520 SNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYL--PSLSIGLT- 576
Query: 297 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
N ++H F K+G++E + F ++ N +TY L+
Sbjct: 577 -NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 615
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 151/387 (39%), Gaps = 27/387 (6%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
P CN L L + +A M + ++ + TF + + +G +K
Sbjct: 188 PKTETCNHILT-LLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKG 246
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 122
+M FG V Y+ L+ G+ G + I S+ K + +T+ ++
Sbjct: 247 FLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLII----SEMKSKGFQPDMQTYNPIL 302
Query: 123 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGI-VNACVSMGLSDKAHSILDEMNA 181
+G + + E L P +S+ Y I + C + G + A + DEM
Sbjct: 303 SWMCNEGRASEVLREMKEI-GLVP------DSVSYNILIRGCSNNGDLEMAFAYRDEMVK 355
Query: 182 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 241
G Y ++ EN+ A IL+ EI G+ LD TY+ LI D +
Sbjct: 356 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKK 415
Query: 242 AFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG---DPRIEVGTHDWN 298
AF+L +M + + +Y +++ L ++ ++VVG P + + N
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM----MN 471
Query: 299 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 358
+++ C G ++ A + M+ + P+D TY L+ G K L ++KR
Sbjct: 472 TLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR- 530
Query: 359 LSSDGHKGIKFDHNLVDAFLYAMVKGG 385
+GIK DH + + K G
Sbjct: 531 ------RGIKPDHISYNTLISGYSKKG 551
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 126/319 (39%), Gaps = 48/319 (15%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG---------------- 45
+PD+ N L C E A V+ M +G+ PD +++
Sbjct: 292 QPDMQTYNPILSWMCNE----GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 46 --------------FLGYLYAVKGL--QEKINELEVLMGEF---GCSNKKVFYSNLISGY 86
F Y + GL + KI E+L+ E G V Y+ LI+GY
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY 407
Query: 87 VKSGNLASMESTILRSLSDEDRKDWNFGGE-TFCAVVKEYLRKGNIKGLANLINEAQKLE 145
+ G+ +L DE D + T+ +++ RK + L +K+
Sbjct: 408 CQHGDAKKA-----FALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF---EKVV 459
Query: 146 PSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTA 205
+K D + +++ ++G D+A S+L EM+ + + Y +++ C E +
Sbjct: 460 GKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFE 519
Query: 206 EATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIM 265
EA L+ E+ G++ D +Y+ LI D + AF + +M +Y ++
Sbjct: 520 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579
Query: 266 TGLMENHRPELMAAFLDEV 284
GL +N EL L E+
Sbjct: 580 KGLSKNQEGELAEELLREM 598
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 156/371 (42%), Gaps = 41/371 (11%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY-LYAVKGLQEKIN 61
P + N+ L G C +++A +V M +G +PD +TF L + L+ E +
Sbjct: 143 PSIVTLNSLLNGFC-HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGN-------LASME-----------STILRSL 103
+E ++ + GC V Y +I+G K G L ME +TI+ L
Sbjct: 202 LVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 104 SDEDRKDWNFG-------------GETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 150
D F T+ ++ G + L+++ + NI
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD---MLEKNIN 317
Query: 151 ADNSIGYGIVNACVSMGLSDKAHSILDEM-NALGGSVGLGVYIPILKAYCKENRTAEATI 209
D +++A V G +A + DEM + + Y ++K +CK R E
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 210 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGL 268
+ E+S GL + TY LI ++D +A +F+ M V PD+ +Y ++ GL
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM-TYNILLDGL 436
Query: 269 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 328
N E A + E + +++ + ++I A CKAG++ED F ++ +PN
Sbjct: 437 CNNGNVE-TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 329 DQTYLSLINGY 339
TY ++++G+
Sbjct: 496 VVTYTTMMSGF 506
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 162/399 (40%), Gaps = 61/399 (15%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVL---MGEFG 71
C ++ A ++G M LG P +T L G+ + +I+E L M E G
Sbjct: 121 CRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG-----NRISEAVALVDQMVEMG 175
Query: 72 CSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNI 131
V ++ L+ G + + + + R + + D T+ AV+ ++G
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL----VTYGAVINGLCKRGEP 231
Query: 132 KGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVY 191
NL+N K+E I+AD I I++ D A + ++M G + Y
Sbjct: 232 DLALNLLN---KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 192 IPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE 251
P++ C R ++A+ L+ ++ + D+ ++ALI+ + A L+ +M +
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 252 ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLE 311
++ + P+++A +N++I FCK R+E
Sbjct: 349 SK-----------------HCFPDVVA------------------YNTLIKGFCKYKRVE 373
Query: 312 DARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG-HKGIKFD 370
+ FR M+ N TY +LI+G+ A N M++ +++ SDG H I
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF----KQMVSDGVHPDIMTY 429
Query: 371 HNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
+ L+D + G + A+ V E + + +D Y
Sbjct: 430 NILLD----GLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 131/338 (38%), Gaps = 20/338 (5%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++ DV N ++G C + + + DA + M G++PD T+ L G
Sbjct: 246 IEADVVIYNTIIDGLC-KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET--F 118
+ L M E + VF++ LI +VK G L E L DE K + + +
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK-----LYDEMVKSKHCFPDVVAY 359
Query: 119 CAVVKEYLRKGNIK-GLANLINEAQKLEPSNIKADNSIGYGIVNA--CVSMGLSDKAHSI 175
++K + + ++ G+ +Q+ N ++ +G A C D A +
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC------DNAQMV 413
Query: 176 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 235
+M + G + Y +L C A ++ + ++LD+ TY +IE
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 236 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD-PRIEVGT 294
+ + + LF + V +Y T+M+G E A E+ D P GT
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 295 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 332
+N++I A + G + + M F + T+
Sbjct: 534 --YNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 159/368 (43%), Gaps = 19/368 (5%)
Query: 1 MKPDVAACNAALEGCCCELESVTDA----ERVVGTMSNLG--VRPDELTFGFLGYLYAVK 54
++PDV L C+ V +A E++ G ++ G ++ D + F L
Sbjct: 325 IRPDVVTL-GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 55 GLQEKINELEVLMG-EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNF 113
G ++ EL V M E C V Y+ LI GY ++G L + + + R DE + +
Sbjct: 384 GRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV-- 441
Query: 114 GGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAH 173
T +V R GL + +E +K + +++AC S+ +KA
Sbjct: 442 --VTVNTIVGGMCRH---HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 174 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 233
++M G S +Y ++ C+ R +A +V ++ G LD+ Y+ LI
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 234 MSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEV 292
+ + + + DM +E + PD +Y T+++ ++ E + ++++ D ++
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPD-SITYNTLISFFGKHKDFESVERMMEQMREDG-LDP 614
Query: 293 GTHDWNSIIHAFCKAGRLEDARRTFRRMNF-LQFEPNDQTYLSLINGYVSAEKHFNVLML 351
+ ++I A+C G L++A + F+ M + PN Y LIN + L L
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Query: 352 WNDVKRKL 359
++K K+
Sbjct: 675 KEEMKMKM 682
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 19/241 (7%)
Query: 159 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 218
+V+AC G +KA +L EM G + Y ++ YCK++ EA + + SG
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG 268
Query: 219 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 278
+ ++ TY++ I + A LFR++++ + +Y T++ G + + A
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTAN-HVTYTTLIDGYCRMNDID-EA 326
Query: 279 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 338
L EV+ G +NSI+ C+ GR+ +A R M+ + EP++ T +LIN
Sbjct: 327 LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Query: 339 YVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN-LVDAF------------LYAMVKGG 385
Y E + + VK+K+ G K + + L+ F L++M++ G
Sbjct: 387 YCKIEDMVSAV----KVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG 442
Query: 386 F 386
F
Sbjct: 443 F 443
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 149/367 (40%), Gaps = 54/367 (14%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAE-RVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEK 59
+KP + AC L + +TD ++ M LGV + + L + + G EK
Sbjct: 164 LKPHLQACTVLLNSLV--KQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEK 221
Query: 60 INELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE--- 116
+L M E G Y+ LIS Y K +S +LS +DR + +
Sbjct: 222 AEKLLSEMEEKGVFPDIFTYNTLISVYCK-------KSMHFEALSVQDRMERSGVAPNIV 274
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 176
T+ + + + R+G ++ L E + ++ A++ +++ M D+A +
Sbjct: 275 TYNSFIHGFSREGRMREATRLFREIK----DDVTANHVTYTTLIDGYCRMNDIDEALRLR 330
Query: 177 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 236
+ M + G S G+ Y IL+ C++ R EA L+ E+S ++ D T + LI
Sbjct: 331 EVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKI 390
Query: 237 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 296
+D SA + + M E +GL ++ +
Sbjct: 391 EDMVSAVKVKKKMIE--------------SGL----------------------KLDMYS 414
Query: 297 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV- 355
+ ++IH FCK LE+A+ M F P TY L++G+ + K + L +
Sbjct: 415 YKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFE 474
Query: 356 KRKLSSD 362
KR L +D
Sbjct: 475 KRGLCAD 481
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 126/312 (40%), Gaps = 51/312 (16%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+ PDV A + G C ++ + +A ++ M G+ PD +TF L Y G +
Sbjct: 382 ITPDVLTYTAIISGFC-QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE---- 116
+ M + GCS V Y+ LI G K G+L S + + W G +
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL--------HEMWKIGLQPNIF 492
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 176
T+ ++V + GNI+ L+ E E + + AD +++A G DKA IL
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGE---FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 177 DEM------------NAL-----------------------GGSVGLGVYIPILKAYCKE 201
EM N L G + + ++K YC
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 202 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY 261
N AT + ++ S G+ D +TY+ L++ +++ + A+ LF++M+ +Y
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 262 LTIMTGLMENHR 273
++ G ++ +
Sbjct: 670 SVLIKGFLKRKK 681
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 152/389 (39%), Gaps = 40/389 (10%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG-FLGYLYAVKGLQEKIN 61
PDV + + + G C + +++ M G++P+ +G +G L + L E
Sbjct: 279 PDVISYSTVVNGYC-RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
++ + G V Y+ LI G+ K G++ + + + +D T+ A+
Sbjct: 338 AFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAAS----KFFYEMHSRDITPDVLTYTAI 392
Query: 122 VKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSI-----------GYGIVNACVSMGL 168
+ + + G++ L +E + LEP ++ I + + N + G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 169 S-------------------DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 209
S D A+ +L EM +G + Y I+ CK EA
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 210 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 269
LV E ++GL D TY L++ S + A + ++M + ++ +M G
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 270 ENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPND 329
+ E L+ ++ I +NS++ +C L+ A ++ M P+
Sbjct: 573 LHGMLEDGEKLLNWMLAKG-IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 330 QTYLSLINGYVSAEKHFNVLMLWNDVKRK 358
+TY +L+ G+ A L+ ++K K
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 176/441 (39%), Gaps = 57/441 (12%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELT----------FGFLGYLYAV------KGLQE-- 58
C+L + +A ++ M G PD ++ FG L ++ + KGL+
Sbjct: 257 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316
Query: 59 --------------KINELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILR 101
K+ E E E G V Y+ LI G+ K G++ + +
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS----K 372
Query: 102 SLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGI 159
+ +D T+ A++ + + G++ L +E + LEP ++ +
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE-----L 427
Query: 160 VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGL 219
+N G A + + M G S + Y ++ CKE A L+ E+ GL
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 220 QLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAA 279
Q ++ TY++++ S + + A L + A + +Y T+M ++ +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 280 FLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
L E++G ++ +N +++ FC G LED + M PN T+ SL+ Y
Sbjct: 548 ILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 340 VSAEKHFNVLMLWNDV-KRKLSSDGH------KGIKFDHNLVDA-FLYAMVKGGFFDAAM 391
++ D+ R + DG KG N+ +A FL+ +KG F ++
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF--SV 664
Query: 392 QVVEKSHEMKIFVDKWRYKQA 412
V S +K F+ + ++ +A
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEA 685
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 120/290 (41%), Gaps = 22/290 (7%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEK--I 60
P+V ++G C E + A ++ M +G++P+ T+ + V GL + I
Sbjct: 454 PNVVTYTTLIDGLCKE-GDLDSANELLHEMWKIGLQPNIFTYNSI-----VNGLCKSGNI 507
Query: 61 NELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET 117
E L+GEF G + V Y+ L+ Y KSG + + + L K T
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG----KGLQPTIVT 563
Query: 118 FCAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSI 175
F ++ + G ++ L+N A+ + P N NS+ + C+ L A +I
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP-NATTFNSL---VKQYCIRNNLK-AATAI 618
Query: 176 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 235
+M + G Y ++K +CK EA L E+ G + V TY LI+ +
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 236 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV 285
+ F A +F MR + K + + RP+ + +DE++
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEII 728
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 133/340 (39%), Gaps = 12/340 (3%)
Query: 5 VAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELE 64
V +CN L + A V +GV + ++ + + G ++ + L
Sbjct: 210 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 65 VLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 124
+LM G + + YS +++GY + G L + + + RK + +++
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGEL----DKVWKLIEVMKRKGLKPNSYIYGSIIGL 325
Query: 125 YLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGG 184
R I LA ++ I D + +++ G A EM++
Sbjct: 326 LCR---ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 185 SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFS 244
+ + Y I+ +C+ EA L E+ GL+ D T+ LI + + AF
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 245 LFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV--VGDPRIEVGTHDWNSIIH 302
+ M +A +Y T++ GL + + L E+ +G ++ +NSI++
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG---LQPNIFTYNSIVN 499
Query: 303 AFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 342
CK+G +E+A + + TY +L++ Y +
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 126/312 (40%), Gaps = 51/312 (16%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+ PDV A + G C ++ + +A ++ M G+ PD +TF L Y G +
Sbjct: 382 ITPDVLTYTAIISGFC-QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE---- 116
+ M + GCS V Y+ LI G K G+L S + + W G +
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL--------HEMWKIGLQPNIF 492
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 176
T+ ++V + GNI+ L+ E E + + AD +++A G DKA IL
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGE---FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 177 DEM------------NAL-----------------------GGSVGLGVYIPILKAYCKE 201
EM N L G + + ++K YC
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 202 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY 261
N AT + ++ S G+ D +TY+ L++ +++ + A+ LF++M+ +Y
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 262 LTIMTGLMENHR 273
++ G ++ +
Sbjct: 670 SVLIKGFLKRKK 681
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 152/389 (39%), Gaps = 40/389 (10%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG-FLGYLYAVKGLQEKIN 61
PDV + + + G C + +++ M G++P+ +G +G L + L E
Sbjct: 279 PDVISYSTVVNGYC-RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
++ + G V Y+ LI G+ K G++ + + + +D T+ A+
Sbjct: 338 AFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAAS----KFFYEMHSRDITPDVLTYTAI 392
Query: 122 VKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSI-----------GYGIVNACVSMGL 168
+ + + G++ L +E + LEP ++ I + + N + G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 169 S-------------------DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 209
S D A+ +L EM +G + Y I+ CK EA
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 210 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 269
LV E ++GL D TY L++ S + A + ++M + ++ +M G
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 270 ENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPND 329
+ E L+ ++ I +NS++ +C L+ A ++ M P+
Sbjct: 573 LHGMLEDGEKLLNWMLAKG-IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 330 QTYLSLINGYVSAEKHFNVLMLWNDVKRK 358
+TY +L+ G+ A L+ ++K K
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 176/441 (39%), Gaps = 57/441 (12%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELT----------FGFLGYLYAV------KGLQE-- 58
C+L + +A ++ M G PD ++ FG L ++ + KGL+
Sbjct: 257 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316
Query: 59 --------------KINELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILR 101
K+ E E E G V Y+ LI G+ K G++ + +
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS----K 372
Query: 102 SLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGI 159
+ +D T+ A++ + + G++ L +E + LEP ++ +
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE-----L 427
Query: 160 VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGL 219
+N G A + + M G S + Y ++ CKE A L+ E+ GL
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 220 QLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAA 279
Q ++ TY++++ S + + A L + A + +Y T+M ++ +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 280 FLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
L E++G ++ +N +++ FC G LED + M PN T+ SL+ Y
Sbjct: 548 ILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 340 VSAEKHFNVLMLWNDV-KRKLSSDGH------KGIKFDHNLVDA-FLYAMVKGGFFDAAM 391
++ D+ R + DG KG N+ +A FL+ +KG F ++
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF--SV 664
Query: 392 QVVEKSHEMKIFVDKWRYKQA 412
V S +K F+ + ++ +A
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEA 685
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 120/290 (41%), Gaps = 22/290 (7%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEK--I 60
P+V ++G C E + A ++ M +G++P+ T+ + V GL + I
Sbjct: 454 PNVVTYTTLIDGLCKE-GDLDSANELLHEMWKIGLQPNIFTYNSI-----VNGLCKSGNI 507
Query: 61 NELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET 117
E L+GEF G + V Y+ L+ Y KSG + + + L K T
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG----KGLQPTIVT 563
Query: 118 FCAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSI 175
F ++ + G ++ L+N A+ + P N NS+ + C+ L A +I
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP-NATTFNSL---VKQYCIRNNLK-AATAI 618
Query: 176 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 235
+M + G Y ++K +CK EA L E+ G + V TY LI+ +
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 236 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV 285
+ F A +F MR + K + + RP+ + +DE++
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEII 728
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 133/340 (39%), Gaps = 12/340 (3%)
Query: 5 VAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELE 64
V +CN L + A V +GV + ++ + + G ++ + L
Sbjct: 210 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 65 VLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 124
+LM G + + YS +++GY + G L + + + RK + +++
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGEL----DKVWKLIEVMKRKGLKPNSYIYGSIIGL 325
Query: 125 YLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGG 184
R I LA ++ I D + +++ G A EM++
Sbjct: 326 LCR---ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 185 SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFS 244
+ + Y I+ +C+ EA L E+ GL+ D T+ LI + + AF
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 245 LFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV--VGDPRIEVGTHDWNSIIH 302
+ M +A +Y T++ GL + + L E+ +G ++ +NSI++
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG---LQPNIFTYNSIVN 499
Query: 303 AFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 342
CK+G +E+A + + TY +L++ Y +
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 159/368 (43%), Gaps = 19/368 (5%)
Query: 1 MKPDVAACNAALEGCCCELESVTDA----ERVVGTMSNLG--VRPDELTFGFLGYLYAVK 54
++PDV L C+ V +A E++ G ++ G ++ D + F L
Sbjct: 325 IRPDVVTL-GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 55 GLQEKINELEVLMG-EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNF 113
G ++ EL V M E C V Y+ LI GY ++G L + + + R DE + +
Sbjct: 384 GRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV-- 441
Query: 114 GGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAH 173
T +V R GL + +E +K + +++AC S+ +KA
Sbjct: 442 --VTVNTIVGGMCRH---HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 174 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 233
++M G S +Y ++ C+ R +A +V ++ G LD+ Y+ LI
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 234 MSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEV 292
+ + + + DM +E + PD +Y T+++ ++ E + ++++ D ++
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPD-SITYNTLISFFGKHKDFESVERMMEQMREDG-LDP 614
Query: 293 GTHDWNSIIHAFCKAGRLEDARRTFRRMNF-LQFEPNDQTYLSLINGYVSAEKHFNVLML 351
+ ++I A+C G L++A + F+ M + PN Y LIN + L L
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Query: 352 WNDVKRKL 359
++K K+
Sbjct: 675 KEEMKMKM 682
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 136/318 (42%), Gaps = 27/318 (8%)
Query: 34 NLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLA 93
N+ V P+ TF L + K E+ E+ M E G V Y+ + + YV+ G
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETV 240
Query: 94 SMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLE-PSNIKAD 152
ES ++ + +++ N G T VV Y R+G ++ + +++ +N+
Sbjct: 241 RAESEVVEKMVMKEKAKPN--GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 153 NSIGYGIVNACVSMGLSDKAHSIL----DEMNALGGSVGLGVYIPILKAYCKENRTAEAT 208
NS+ G V G+ + ++L +E L G+ + V + L C
Sbjct: 299 NSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKEC--------- 349
Query: 209 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 268
++ DV TY ++ S+ + A +F++M +A V +Y + G
Sbjct: 350 ---------NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 400
Query: 269 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 328
+ P+ L+ ++ + R V + ++I +C G ++DA R F +M PN
Sbjct: 401 VRAKEPKKAEELLETLIVESRPNVVI--FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 458
Query: 329 DQTYLSLINGYVSAEKHF 346
+T+ +L+ GY+ ++ +
Sbjct: 459 IKTFETLMWGYLEVKQPW 476
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Query: 159 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 218
++N + G +A ++ + G L Y +L A + + + +V E+ SG
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 219 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 278
+LD ++A+I S + + A M+E + +Y T++ G +PE +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 279 AFLDEVVGDPRIEVGTH--DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
LD ++ + ++VG + +N ++ A+CK ++E+A ++M P+ TY ++
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 337 NGYV 340
YV
Sbjct: 231 TCYV 234
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 112/249 (44%), Gaps = 14/249 (5%)
Query: 98 TILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY 157
T+ ++L++ + T A + + G+I + + ++E S K D+
Sbjct: 66 TVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS------EVEQSGTKLDSIFFN 119
Query: 158 GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC---KENRTAEATILVMEI 214
++NA G + A L +M LG + Y ++K Y K R++E L++E
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 215 SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM---EN 271
+ + ++ T++ L++ + + A+ + + M E V +Y TI T + E
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 272 HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 331
R E + ++++V + + ++ +C+ GR+ D R RRM ++ E N
Sbjct: 240 VRAE--SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV 297
Query: 332 YLSLINGYV 340
+ SLING+V
Sbjct: 298 FNSLINGFV 306
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 140/339 (41%), Gaps = 11/339 (3%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++P + N + G E + + A+ V + + G PD T+ FL Y G +++
Sbjct: 781 VQPKLPTYNLLIGGLL-EADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
EL M C + ++ +ISG VK+GN+ +SD +D++ T+
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD---RDFSPTACTYGP 896
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
++ + G + L + + + + +I ++N G +D A ++ M
Sbjct: 897 LIDGLSKSGRLYEAKQLF---EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G L Y ++ C R E E+ SGL DV Y+ +I S +
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013
Query: 241 SAFSLFRDMREAR--VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWN 298
A LF +M+ +R PDL +Y +++ L E +E + +E +N
Sbjct: 1014 EALVLFNEMKTSRGITPDLY-TYNSLILNLGIAGMVEEAGKIYNE-IQRAGLEPNVFTFN 1071
Query: 299 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 337
++I + +G+ E A ++ M F PN TY L N
Sbjct: 1072 ALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 110/285 (38%), Gaps = 42/285 (14%)
Query: 170 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 229
D +L EM LG + + ++ + + EA ++ + G DV TY L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 230 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMEN-----------------H 272
I+ +++ A +F M+ R + +Y+T++ +N H
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 273 RPELM--AAFLD---------------EVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 315
P+++ +D +V+ D I H +N++I + RL+DA
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 316 TFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVD 375
F M L +P TY+ I+ Y + + L + +K KGI + +
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT-------KGIAPNIVACN 472
Query: 376 AFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKL 420
A LY++ K G A Q+ ++ + D Y M+ + K+
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM-MMKCYSKV 516
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 142/381 (37%), Gaps = 49/381 (12%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+KP V N L G + + +A + M G P+ +TF L + E
Sbjct: 569 LKPTVVTYNTLLAGLG-KNGKIQEAIELFEGMVQKGCPPNTITFNTL--FDCLCKNDEVT 625
Query: 61 NELEVL--MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 118
L++L M + GC Y+ +I G VK+G + + D+
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE-AMCFFHQMKKLVYPDFVTLCTLL 684
Query: 119 CAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 178
VVK L + K + N + +P+N+ ++ IG + A + D A S +
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCAD-QPANLFWEDLIGSILAEAGI-----DNAVSFSER 738
Query: 179 MNALG-GSVGLGVYIPILKAYCKENRTAEATILV-------------------------- 211
+ A G G + +PI++ CK N + A L
Sbjct: 739 LVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEA 798
Query: 212 ----------MEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY 261
+++ S+G DV TY+ L++ S F L+++M ++
Sbjct: 799 DMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITH 858
Query: 262 LTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMN 321
+++GL++ + +++ D + +I K+GRL +A++ F M
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Query: 322 FLQFEPNDQTYLSLINGYVSA 342
PN Y LING+ A
Sbjct: 919 DYGCRPNCAIYNILINGFGKA 939
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 132/337 (39%), Gaps = 65/337 (19%)
Query: 79 YSNLISGYVKSGNLASMESTILRSLSDE----DRKDWN--FGGETFCAVVKEYLRKGNI- 131
YS+LI G +GN+ ES + L + D +N GG C +KE L I
Sbjct: 293 YSSLIHGLCDAGNVDKAES-VFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 132 ---------------KGLAN--LINEAQ---KLEPSNIKADNSIGYGIV--NACVSMGLS 169
KGL I+EA +L P+ A + YGI CV+ G
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN-GYV 410
Query: 170 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 229
+KA ++ E+ + GG + + Y I+ CK+ R EA+ LV E+S G++L+ +AL
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470
Query: 230 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV---- 285
I + A R+M + SY ++ GL + + +AF+ E++
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530
Query: 286 ---------------GDPRIEVGTHDW---------------NSIIHAFCKAGRLEDARR 315
D +I++ W N +IH C G+L+DA
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 316 TFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 352
M N TY +L+ G+ ++W
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 19/243 (7%)
Query: 145 EPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRT 204
EP+ I++ N++ +NA V K S+ G + L Y ++K CK+
Sbjct: 111 EPA-IRSYNTL----LNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEF 165
Query: 205 AEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLT 263
+A + + G + DV +Y +I + A LF +M E V PD+ Y
Sbjct: 166 EKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVT-CYNI 224
Query: 264 IMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFL 323
++ G ++ + D ++ D + N +I K GR++D + + RM
Sbjct: 225 LIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQN 284
Query: 324 QFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVK 383
+ E + TY SLI+G A ++N++ + +S +D Y +
Sbjct: 285 EREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKAS------------IDVVTYNTML 332
Query: 384 GGF 386
GGF
Sbjct: 333 GGF 335
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 91/193 (47%), Gaps = 4/193 (2%)
Query: 170 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 229
+KA LD M G + Y ++ K + +A L E+S G+ DV Y+ L
Sbjct: 166 EKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNIL 225
Query: 230 IETSMSSQDFQSAFSLFRDMRE--ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD 287
I+ + +D ++A L+ + E + P++K ++ +++GL + R + + + +
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVK-THNIMISGLSKCGRVDDCLKIWERMKQN 284
Query: 288 PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFN 347
R E + ++S+IH C AG ++ A F ++ + + TY +++ G+ K
Sbjct: 285 ER-EKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKE 343
Query: 348 VLMLWNDVKRKLS 360
L LW ++ K S
Sbjct: 344 SLELWRIMEHKNS 356
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 160/397 (40%), Gaps = 57/397 (14%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 61
KP+VA L C + + A RV+ M + G+ PD + +L +G
Sbjct: 103 KPNVAHSTQLLYDLC-KANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAM 161
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
+L M + G + V Y+ L+ G G+L + F
Sbjct: 162 QLVEKMEDHGYPSNTVTYNALVRGLCMLGSL---------------NQSLQF-------- 198
Query: 122 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMN 180
V+ ++KG A N+ Y ++ A +D+A +LDE+
Sbjct: 199 VERLMQKG--------------------LAPNAFTYSFLLEAAYKERGTDEAVKLLDEII 238
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
GG L Y +L +CKE RT +A L E+ + G + +V +Y+ L+ ++
Sbjct: 239 VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWE 298
Query: 241 SAFSLFRDMREA-RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV-GDPRIEVGTHDWN 298
A SL +M R P + +Y ++ L + R E L E+ G+ + V +N
Sbjct: 299 EANSLLAEMDGGDRAPSVV-TYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYN 357
Query: 299 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYL---SLINGYVSAEKHFNVLMLWNDV 355
+I CK G+++ + M + + +PN+ TY SL ++ F ++ ++
Sbjct: 358 PVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNK 417
Query: 356 KRKLSSDGHKGIKFD----HNLVDAF--LYAMVKGGF 386
++ + D +K + N AF LY M + GF
Sbjct: 418 QKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGF 454
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 139/350 (39%), Gaps = 39/350 (11%)
Query: 22 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 81
+ DA V+ M+ G P+ + + L + G K E++ LM G S Y+
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 82 LISGYVKSG-------------------NLASMESTI------------LRSLSDEDRKD 110
LI GY K+G N S S I LR + + ++
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 111 WNFGGETFCAVVKEYLRKG-NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLS 169
+ GG ++ + G + K L K + + N++ +G+ A G
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA----GKL 521
Query: 170 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 229
D+A I E+ G + Y ++ C + + EA + + E+ GL+ D TY L
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 230 IETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 288
I + + A + D R +PD+ +Y ++ G + R E F DE++
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVY-TYSVMIDGCCKAERTEEGQEFFDEMMSK- 639
Query: 289 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 338
++ T +N +I A+C++GRL A M PN TY SLI G
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 152/369 (41%), Gaps = 53/369 (14%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+ PDV A+ C + V +A ++ M GV P+ +TF + + G ++
Sbjct: 256 VSPDVYLFTTAINAFC-KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
+ M E G + YS L+ G ++ + D F
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIG----------------DAYF------- 351
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
V+KE +KG P N+ N++ +++ + G +KA I D M
Sbjct: 352 VLKEMTKKGF---------------PPNVIVYNNL----IDSFIEAGSLNKAIEIKDLMV 392
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
+ G S+ Y ++K YCK + A L+ E+ S G ++ ++ ++I S F
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 241 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRP----ELMAAFLDEVVGDPRIEVGTHD 296
SA +M + G T+++GL ++ + EL FL++ V T
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK-----GFVVDTRT 507
Query: 297 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND-V 355
N+++H C+AG+L++A R + + + +Y +LI+G +K M ++ V
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 356 KRKLSSDGH 364
KR L D +
Sbjct: 568 KRGLKPDNY 576
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 95/242 (39%), Gaps = 9/242 (3%)
Query: 149 IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 208
+K DN ++ +M ++A D+ G + Y ++ CK RT E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 209 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 268
E+ S +Q + Y+ LI S A L DM+ + +Y +++ G+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 269 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 328
R E A L E + +E + ++I + K G++ R M+ PN
Sbjct: 691 SIISRVE-EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 329 DQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVK-GGFF 387
TY +I GY + NV + R L+ KGI D F+Y +K GG
Sbjct: 750 KITYTVMIGGYA---RDGNV----TEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVL 802
Query: 388 DA 389
+A
Sbjct: 803 EA 804
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 139/350 (39%), Gaps = 39/350 (11%)
Query: 22 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 81
+ DA V+ M+ G P+ + + L + G K E++ LM G S Y+
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 82 LISGYVKSG-------------------NLASMESTI------------LRSLSDEDRKD 110
LI GY K+G N S S I LR + + ++
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 111 WNFGGETFCAVVKEYLRKG-NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLS 169
+ GG ++ + G + K L K + + N++ +G+ A G
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA----GKL 521
Query: 170 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 229
D+A I E+ G + Y ++ C + + EA + + E+ GL+ D TY L
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 230 IETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 288
I + + A + D R +PD+ +Y ++ G + R E F DE++
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVY-TYSVMIDGCCKAERTEEGQEFFDEMMSK- 639
Query: 289 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 338
++ T +N +I A+C++GRL A M PN TY SLI G
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 152/369 (41%), Gaps = 53/369 (14%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+ PDV A+ C + V +A ++ M GV P+ +TF + + G ++
Sbjct: 256 VSPDVYLFTTAINAFC-KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
+ M E G + YS L+ G ++ + D F
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIG----------------DAYF------- 351
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
V+KE +KG P N+ N++ +++ + G +KA I D M
Sbjct: 352 VLKEMTKKGF---------------PPNVIVYNNL----IDSFIEAGSLNKAIEIKDLMV 392
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
+ G S+ Y ++K YCK + A L+ E+ S G ++ ++ ++I S F
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 241 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRP----ELMAAFLDEVVGDPRIEVGTHD 296
SA +M + G T+++GL ++ + EL FL++ V T
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK-----GFVVDTRT 507
Query: 297 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND-V 355
N+++H C+AG+L++A R + + + +Y +LI+G +K M ++ V
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 356 KRKLSSDGH 364
KR L D +
Sbjct: 568 KRGLKPDNY 576
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 95/242 (39%), Gaps = 9/242 (3%)
Query: 149 IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 208
+K DN ++ +M ++A D+ G + Y ++ CK RT E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 209 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 268
E+ S +Q + Y+ LI S A L DM+ + +Y +++ G+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 269 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 328
R E A L E + +E + ++I + K G++ R M+ PN
Sbjct: 691 SIISRVE-EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 329 DQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVK-GGFF 387
TY +I GY + NV + R L+ KGI D F+Y +K GG
Sbjct: 750 KITYTVMIGGYA---RDGNV----TEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVL 802
Query: 388 DA 389
+A
Sbjct: 803 EA 804
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 147/366 (40%), Gaps = 47/366 (12%)
Query: 10 AALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GY-----LYAVKGLQEKI-- 60
L C C ++ A +G M LG P +TFG L G+ Y L ++I
Sbjct: 118 TTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG 177
Query: 61 ------------------------NELEVL--MGEFGCSNKKVFYSNLISGYVKSGNLAS 94
L+VL M + G V Y++LI+ SG
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237
Query: 95 MESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE-AQKLEPSNIKADN 153
R LSD R + TF A++ Y ++G + NE Q+ NI N
Sbjct: 238 SA----RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYN 293
Query: 154 SIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVME 213
S+ +N GL D+A +L+ + + G Y ++ YCK R + ++
Sbjct: 294 SL----INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCV 349
Query: 214 ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENH 272
+S G+ D TY+ L + + F +A + M V PD+ ++ ++ GL ++
Sbjct: 350 MSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMY-TFNILLDGLCDHG 408
Query: 273 RPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 332
+ L+++ + VG +N II CKA ++EDA F + P+ TY
Sbjct: 409 KIGKALVRLEDLQKSKTV-VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Query: 333 LSLING 338
++++ G
Sbjct: 468 ITMMIG 473
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 120/275 (43%), Gaps = 12/275 (4%)
Query: 171 KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALI 230
+A S++D++ LG + +Y I+ + C++ + A ++ + G++ DV TY++LI
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 231 ETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR 289
S + + + DM R PD+ I E E + + +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 290 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVL 349
+ T +NS+I+ C G L++A++ + F PN TY +LINGY A++ + +
Sbjct: 287 PNIVT--YNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGM 344
Query: 350 MLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
+ + R DG G F +N + G F AA +V+ + + D + +
Sbjct: 345 KILCVMSR----DGVDGDTFTYN---TLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTF 397
Query: 410 KQAF--METHKKLKVAKLRKRNTKKMEAVIAFKNW 442
+ H K+ A +R + +K + V+ +
Sbjct: 398 NILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITY 432
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 155/362 (42%), Gaps = 27/362 (7%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKI 60
P++ +A ++G C + +V A + + + P+ + FG L G+ A + + +
Sbjct: 267 PNLYTYSAMIDGYC-KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTAR- 324
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
L V M +FG Y+ LI G+ KSGN+ +E+ L S + + N + F
Sbjct: 325 -SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNM--LEAVGLLS----EMESLNLSPDVFTY 377
Query: 121 VVKEYLRKGNIKGLA--NLINEA----QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS 174
+ I GL + + EA QK++ I ++ +++ ++A
Sbjct: 378 TIL-------INGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 175 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 234
+ EM A G + + ++ YC A L E++ G+ DV TY ALI+
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490
Query: 235 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 294
+ + A L+ DM EA + ++ ++ G + R + F E + +
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE--NNQQRSCWN 548
Query: 295 H-DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWN 353
H + +I C+ G + A R F M P+ +Y+S++ G++ ++ + +ML
Sbjct: 549 HVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQC 608
Query: 354 DV 355
D+
Sbjct: 609 DM 610
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 151 ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATIL 210
D I + + C GL K +LDEM +LG + +Y + C++N+ EA +
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 211 VMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLME 270
+ G+ ++ TY A+I+ + + + A+ L++++ A + + T++ G +
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 316
Query: 271 NHRPELMAAFLDEVVG---DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEP 327
+ +V DP + V +N +IH CK+G + +A M L P
Sbjct: 317 ARELVTARSLFVHMVKFGVDPNLYV----YNCLIHGHCKSGNMLEAVGLLSEMESLNLSP 372
Query: 328 NDQTYLSLING 338
+ TY LING
Sbjct: 373 DVFTYTILING 383
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 161/389 (41%), Gaps = 45/389 (11%)
Query: 11 ALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL-GYLYAVKGLQEKINELEVLMGE 69
AL C ++ +V M + +RPD +T G L L + + E + E + G+
Sbjct: 299 ALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGK 358
Query: 70 FG-----CSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 124
+ ++ LI G K G L E ++R + E+R N T+ ++
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVR-MKLEERCAPN--AVTYNCLIDG 415
Query: 125 YLRKGNIKGLANLINEAQ--KLEPSNIKADNSIG-------------------------- 156
Y R G ++ +++ + +++P+ + + +G
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 157 ----YGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVM 212
+++AC S+ +KA ++M G S +Y ++ C+ R +A +V
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 213 EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMEN 271
++ G LD+ Y+ LI + + + + DM +E + PD +Y T+++ ++
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPD-SITYNTLISFFGKH 594
Query: 272 HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNF-LQFEPNDQ 330
E + ++++ D ++ + ++I A+C G L++A + F+ M + PN
Sbjct: 595 KDFESVERMMEQMREDG-LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV 653
Query: 331 TYLSLINGYVSAEKHFNVLMLWNDVKRKL 359
Y LIN + L L ++K K+
Sbjct: 654 IYNILINAFSKLGNFGQALSLKEEMKMKM 682
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 11/215 (5%)
Query: 167 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 226
G +D+A +L +M + G + Y ++ +C++ A I+ I GL+ + TY
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 227 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 286
LI+ + D Q+A + M + + Y TI+ GL + + L ++
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 287 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHF 346
+ R+ V +NSII F K G ++ A + M PN TY SL+NG +
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 347 NVLMLWNDVKRKLSSDGHKGIKFD----HNLVDAF 377
L + +++K +KG+K D L+D F
Sbjct: 637 QALEMRDEMK-------NKGVKLDIPAYGALIDGF 664
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 159/364 (43%), Gaps = 28/364 (7%)
Query: 4 DVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG--FLGYLYAVKGLQEKIN 61
+V CN L C + ++ +A ++ M + G+ P+ +++ LG+ +I
Sbjct: 442 NVFVCNTILSWLCKQGKT-DEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIV 500
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
+L E G YS LI G ++ + E L ++ + G + +
Sbjct: 501 FSNIL--EKGLKPNNYTYSILIDGCFRNHD----EQNALEVVNHMTSSNIEVNGVVYQTI 554
Query: 122 VKEYLRKGNIKG----LANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 177
+ + G LAN+I E ++L S + ++ I++ G D A + +
Sbjct: 555 INGLCKVGQTSKARELLANMIEE-KRLCVSCMSYNS-----IIDGFFKEGEMDSAVAAYE 608
Query: 178 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 237
EM G S + Y ++ CK NR +A + E+ + G++LD+ Y ALI+
Sbjct: 609 EMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS 668
Query: 238 DFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLD---EVVGDP-RIEVG 293
+ +SA +LF ++ E + + Y ++++G M A LD +++ D R ++G
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN---MVAALDLYKKMLKDGLRCDLG 725
Query: 294 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWN 353
T + ++I K G L A + M + P++ Y ++NG + V+ ++
Sbjct: 726 T--YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFE 783
Query: 354 DVKR 357
++K+
Sbjct: 784 EMKK 787
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 18/287 (6%)
Query: 119 CAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 178
CA++ LRK + + +K+ +K + G+V + GL ++A I E
Sbjct: 311 CAILITTLRKAG-RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTE 369
Query: 179 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 238
M G VY ++ AY K N E L E+ GL+ TY+ L++
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQ 429
Query: 239 FQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAA--FLD-EVVGDPRIEVGT 294
+L R+M + + P++K SY +++ + MAA FL + VG ++ +
Sbjct: 430 PDIVETLLREMEDLGLEPNVK-SYTCLISAYGRTKKMSDMAADAFLRMKKVG---LKPSS 485
Query: 295 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 354
H + ++IHA+ +G E A +F M +P+ +TY S+++ + + ++ +W
Sbjct: 486 HSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKL 545
Query: 355 VKRKLSSDGHKGIKFDHN-LVDAFLYAMVKGGFFDAAMQVVEKSHEM 400
+ R + KG + +N L+D F K G + A VV + +M
Sbjct: 546 MLR----EKIKGTRITYNTLLDGF----AKQGLYIEARDVVSEFSKM 584
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 3/194 (1%)
Query: 148 NIKADNSIGYGIVNACVSMGLSDK-AHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 206
N+ DN ++ G S K I ++M+ G V+ ++K++C E E
Sbjct: 303 NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEE 362
Query: 207 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 266
A ++ E+ G++ + Y+ L++ S + LF +MR+ + +Y +M
Sbjct: 363 ALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMD 422
Query: 267 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED-ARRTFRRMNFLQF 325
+P+++ L E + D +E + +I A+ + ++ D A F RM +
Sbjct: 423 AYARRMQPDIVETLLRE-MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGL 481
Query: 326 EPNDQTYLSLINGY 339
+P+ +Y +LI+ Y
Sbjct: 482 KPSSHSYTALIHAY 495
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 141/344 (40%), Gaps = 19/344 (5%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
PD C + S + + MS GV+ + FG L + +GL+E+
Sbjct: 306 PDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALV 365
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 122
++ M + G + + Y+ L+ Y KS ++ +E + + D+ K T+ ++
Sbjct: 366 IQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEG-LFTEMRDKGLKP---SAATYNILM 421
Query: 123 KEYLRKGNIKGLANLINEAQK--LEPSNIKADNSI--GYGIVNACVSMGLSDKAHSILDE 178
Y R+ + L+ E + LEP N+K+ + YG +SD A
Sbjct: 422 DAYARRMQPDIVETLLREMEDLGLEP-NVKSYTCLISAYGRTKK-----MSDMAADAFLR 475
Query: 179 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 238
M +G Y ++ AY +A E+ G++ VETY ++++ S D
Sbjct: 476 MKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGD 535
Query: 239 FQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR--IEVGTHD 296
+++ M ++ + +Y T++ G + L D V + ++
Sbjct: 536 TGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQG---LYIEARDVVSEFSKMGLQPSVMT 592
Query: 297 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV 340
+N +++A+ + G+ + + M L +P+ TY ++I +V
Sbjct: 593 YNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFV 636
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 108/261 (41%), Gaps = 10/261 (3%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYA-VKGLQEK 59
+KP A N ++ ++ E ++ M +LG+ P+ ++ L Y K + +
Sbjct: 410 LKPSAATYNILMDAYARRMQPDI-VETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDM 468
Query: 60 INELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFC 119
+ + M + G Y+ LI Y SG S + ++ ET+
Sbjct: 469 AADAFLRMKKVGLKPSSHSYTALIHAYSVSG----WHEKAYASFEEMCKEGIKPSVETYT 524
Query: 120 AVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 179
+V+ + R G+ L + + IK +++ GL +A ++ E
Sbjct: 525 SVLDAFRRSGDTGKLMEIWKLMLR---EKIKGTRITYNTLLDGFAKQGLYIEARDVVSEF 581
Query: 180 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 239
+ +G + Y ++ AY + + A+ L+ E+++ L+ D TY +I + +DF
Sbjct: 582 SKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDF 641
Query: 240 QSAFSLFRDM-REARVPDLKG 259
+ AF + M + +VPD +
Sbjct: 642 KRAFFYHKMMVKSGQVPDPRS 662
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 154/418 (36%), Gaps = 55/418 (13%)
Query: 4 DVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKIN 61
++ CN L C C ++ A +G M LG P +TFG L G+ + + + +
Sbjct: 115 NLCTCNILLN-CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR-VYDALY 172
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
+ ++G G V Y+ +I G KS + + + R D D T+ ++
Sbjct: 173 MFDQMVG-MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV----VTYNSL 227
Query: 122 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 181
+ G +++ K E I D +++ACV G +A +EM
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKRE---IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 182 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 241
+ Y ++ C +R EA + + S G DV TY LI S+ +
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 242 AFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSII 301
LF +M + G++ N T + +I
Sbjct: 345 GMKLFCEMSQ--------------RGVVRN----------------------TVTYTILI 368
Query: 302 HAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSS 361
+C+AG+L A FRRM F PN TY L++G K L++ D+++
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK---- 424
Query: 362 DGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKK 419
G+ D + + M K G A + + + D W Y + +KK
Sbjct: 425 ---NGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 12/251 (4%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
PDV NA ++ C E V++AE M + PD +T+ L Y + ++ E
Sbjct: 254 PDVFTFNALIDACVKE-GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 122
+ M GC V YS LI+GY KS + ++ + ++ T+ ++
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG----MKLFCEMSQRGVVRNTVTYTILI 368
Query: 123 KEYLRKGNIKGLANLINEAQ--KLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
+ Y R G + + + P NI N + +G+ + G +KA IL +M
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHP-NIITYNVLLHGLCDN----GKIEKALVILADMQ 423
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G + Y I++ CK A+A + ++ GL D+ TY ++ +
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR 483
Query: 241 SAFSLFRDMRE 251
A +LFR M+E
Sbjct: 484 EADALFRKMKE 494
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 150/380 (39%), Gaps = 50/380 (13%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+ PD AC A + G C + E V + + V+ + + L + G EK
Sbjct: 180 VSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKA 239
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
L+ M + GC V Y+ L++ Y + L E +++ R ++
Sbjct: 240 EALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGV----MAEMVRSGIQLDAYSYNQ 295
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
++K + R + N + +++EP S I C + + KA+ + +EM
Sbjct: 296 LLKRHCRVSHPDKCYNFM--VKEMEPRGFCDVVSYSTLIETFCRASN-TRKAYRLFEEMR 352
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G + + Y ++KA+ +E ++ A L+ +++ GL D Y +++ S +
Sbjct: 353 QKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVD 412
Query: 241 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSI 300
A+ +F DM E + P+ ++ +NS+
Sbjct: 413 KAYGVFNDMIEHEIT------------------PDAIS------------------YNSL 436
Query: 301 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLS 360
I C++GR+ +A + F M + P++ T+ +I G + +K +W+ +
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM---- 492
Query: 361 SDGHKGIKFDHNLVDAFLYA 380
KG D ++ D + A
Sbjct: 493 ---DKGFTLDRDVSDTLIKA 509
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 2/171 (1%)
Query: 170 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 229
D ++L +M LG + + L C+EN+ A + G + DV +Y L
Sbjct: 96 DLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTIL 155
Query: 230 IETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 288
I + A ++ M R PD K ++ GL + +L + E +
Sbjct: 156 INGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC-AALVVGLCHARKVDLAYEMVAEEIKSA 214
Query: 289 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
R+++ T +N++I FCKAGR+E A M+ + EP+ TY L+N Y
Sbjct: 215 RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 91/200 (45%), Gaps = 1/200 (0%)
Query: 159 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 218
+++ + G +++ + + M G + Y ++ +CK + +A L+ E+ + G
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 219 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 278
+ V TY ++I+ A+ LF + + R+ Y +++ G + R +
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 279 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 338
L+E++ + + WNS++ A KA + +A F+ M L+ PN TY LING
Sbjct: 678 LILEELM-QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILING 736
Query: 339 YVSAEKHFNVLMLWNDVKRK 358
K + W +++++
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQ 756
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/403 (20%), Positives = 157/403 (38%), Gaps = 25/403 (6%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
PD+ C + G C L A +++ + G PD +T+ + Y G +IN
Sbjct: 135 PDIIPCTTLIRGFC-RLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG---EINN 190
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 122
++ S V Y+ ++ SG L + R L ++D T+ ++
Sbjct: 191 ALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML----QRDCYPDVITYTILI 246
Query: 123 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNAL 182
+ R + L++E + D +VN G D+A L++M +
Sbjct: 247 EATCRDSGVGHAMKLLDE---MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 183 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSA 242
G + + IL++ C R +A L+ ++ G V T++ LI A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 243 FSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGTHDWNS 299
+ M + SY ++ G + + + +L+ +V P I +N+
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT----YNT 419
Query: 300 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKL 359
++ A CK G++EDA +++ P TY ++I+G A K + L ++++
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR--- 476
Query: 360 SSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKI 402
K +K D + + + + G D A++ + M I
Sbjct: 477 ----AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 142/370 (38%), Gaps = 61/370 (16%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--------GYLYA 52
+ PDV N L C + + A V+ M PD +T+ L G +A
Sbjct: 200 VSPDVVTYNTILRSLC-DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 53 VKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNL-------ASMEST------- 98
+K L E M + GC+ V Y+ L++G K G L M S+
Sbjct: 259 MKLLDE--------MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 99 ----ILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNS 154
ILRS+ R W E A + LRKG PS + +
Sbjct: 311 THNIILRSMCSTGR--W-MDAEKLLA---DMLRKG--------------FSPSVVTFNI- 349
Query: 155 IGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEI 214
++N GL +A IL++M G Y P+L +CKE + A + +
Sbjct: 350 ----LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 215 SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRP 274
S G D+ TY+ ++ + A + + + +Y T++ GL + +
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 275 ELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLS 334
LDE+ ++ T ++S++ + G++++A + F + PN T+ S
Sbjct: 466 GKAIKLLDEMRAKD-LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 335 LINGYVSAEK 344
++ G + +
Sbjct: 525 IMLGLCKSRQ 534
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 146/350 (41%), Gaps = 25/350 (7%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
P V NA + G C + V A ++ M +P+ TF L G K
Sbjct: 369 PSVITYNALINGYCKD-GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 122
L M + G S V Y+ LI G + G++ +T + LS + D TF A++
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHM----NTAYKLLSSMNCFDIEPDCLTFTAII 483
Query: 123 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD---EM 179
+ ++G + + + I D G +++ +G + A IL+ +M
Sbjct: 484 NAFCKQGKADVASAFLGLMLR---KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540
Query: 180 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 239
L L V + +L CK E ++ +I+ GL V TY L++ + S D
Sbjct: 541 RILTTPHSLNVILDMLSKGCK---VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597
Query: 240 QSAFSLFRDMR-EARVPDLKGSYLTIMTGLMENHRPE----LMAAFLDEVVGDPRIEVGT 294
+F + M+ +P++ Y I+ GL + R E L++A D V +
Sbjct: 598 TGSFRILELMKLSGCLPNVY-PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT--- 653
Query: 295 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 344
+ ++ + G+L+ A T R M +E ND+ Y SL+ G+V ++K
Sbjct: 654 --YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 20/251 (7%)
Query: 159 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 218
++ A GL DKA ++ DEM G + Y ++ C++ + EA + ++
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 219 LQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELM 277
+ V TY+ALI AF L M + A P+++ ++ +M GL +P
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR-TFNELMEGLCRVGKPYKA 425
Query: 278 AAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 337
L ++ D + +N +I C+ G + A + MN EP+ T+ ++IN
Sbjct: 426 VHLLKRML-DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 338 GYVSAEK-----HFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQ 392
+ K F LML KGI D + + K G A+
Sbjct: 485 AFCKQGKADVASAFLGLML------------RKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 393 VVEKSHEMKIF 403
++E +M+I
Sbjct: 533 ILETLVKMRIL 543
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 11/242 (4%)
Query: 151 ADNSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 209
A NS+ Y I ++ +G ++A + D+M G Y ++KA C +A
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 210 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 269
L E+ G + +V TY LI+ + A + R M + R+ +Y ++ G
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 270 ENHRPELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 328
++ R ++ AF L V+ + +N ++ C+ G+ A +RM P+
Sbjct: 383 KDGR--VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440
Query: 329 DQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFD 388
+Y LI+G + E H N + LSS I+ D A + A K G D
Sbjct: 441 IVSYNVLIDG-LCREGHMNT------AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 389 AA 390
A
Sbjct: 494 VA 495
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 135/331 (40%), Gaps = 18/331 (5%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 76
CE+ + +A + M G +P T+ L +GL +K L M GC
Sbjct: 277 CEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNV 336
Query: 77 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE-TFCAVVKEYLRKGNIKGLA 135
Y+ LI G + G + + + KD F T+ A++ Y + G +
Sbjct: 337 HTYTVLIDGLCRDGKIEEANGVCRKMV-----KDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 136 NLIN--EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIP 193
L+ E + +P N++ N + G+ +G KA +L M G S + Y
Sbjct: 392 ELLTVMEKRACKP-NVRTFNELMEGLCR----VGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 194 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE--TSMSSQDFQSAFSLFRDMRE 251
++ C+E A L+ ++ ++ D T+ A+I D SAF +
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 252 ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLE 311
+ ++ G+ T++ G+ + + A F+ E + RI H N I+ K +++
Sbjct: 507 ISLDEVTGT--TLIDGVCKVGKTR-DALFILETLVKMRILTTPHSLNVILDMLSKGCKVK 563
Query: 312 DARRTFRRMNFLQFEPNDQTYLSLINGYVSA 342
+ ++N L P+ TY +L++G + +
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 72/169 (42%), Gaps = 4/169 (2%)
Query: 172 AHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 231
A+ M A G VG+ Y I+ A CK T A + + +I G LD +L+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 232 TSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAF-LDEVVGDPR 289
+ + A +F M +E SY ++ GL E R E AF L + +G+
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLE--EAFGLKDQMGEKG 296
Query: 290 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 338
+ T + +I A C G ++ A F M +PN TY LI+G
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDG 345
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 156/372 (41%), Gaps = 31/372 (8%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG-LQEKI 60
+PD + A++ C + V + + LGV + T+ + + +G ++E +
Sbjct: 271 EPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAV 330
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE----DRKDWNFGGE 116
++ ++G FG + ++L++GY K GN + + +E D+ ++ E
Sbjct: 331 RVMDEMVG-FGIPMSVIAATSLVNGYCK-GNELGKALDLFNRMEEEGLAPDKVMFSVMVE 388
Query: 117 TFCA------VVKEYLRKGN-------------IKGLANLINEAQKLEPSNIKADNSIGY 157
FC ++ Y+R + I+G + LE N ++ I +
Sbjct: 389 WFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAH 448
Query: 158 GIVNACVSM-----GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVM 212
G + + + G D A S L M G + Y ++ A+C+ A +
Sbjct: 449 GFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFS 508
Query: 213 EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENH 272
E+ GL+ + TY LI+ ++D Q+A+ + M + + Y TI+ GL +
Sbjct: 509 EMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVG 568
Query: 273 RPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 332
+ L ++ + R + +NSII F K G + A T+R M+ PN T+
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTF 628
Query: 333 LSLINGYVSAEK 344
SLING+ + +
Sbjct: 629 TSLINGFCKSNR 640
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 138/329 (41%), Gaps = 44/329 (13%)
Query: 66 LMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEY 125
+M + G VFY+N++ + + N+ + +I + ++ + NF T+ ++ +
Sbjct: 474 MMEQKGIEPNVVFYNNMMLAHCRMKNM-DLARSIFSEMLEKGLEPNNF---TYSILIDGF 529
Query: 126 LRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKA------------- 172
+ + + ++IN+ + SN +A+ I I+N +G + KA
Sbjct: 530 FKNKDEQNAWDVINQ---MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRY 586
Query: 173 -------HSILD----------------EMNALGGSVGLGVYIPILKAYCKENRTAEATI 209
+SI+D EM+ G S + + ++ +CK NR A
Sbjct: 587 SMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALE 646
Query: 210 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 269
+ E+ S L+LD+ Y ALI+ D ++A++LF ++ E + Y ++++G
Sbjct: 647 MTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFR 706
Query: 270 ENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPND 329
+ + ++V D I + ++I K G + A + + L P++
Sbjct: 707 NLGKMDAAIDLYKKMVND-GISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDE 765
Query: 330 QTYLSLINGYVSAEKHFNVLMLWNDVKRK 358
++ L+NG + + ++K+K
Sbjct: 766 ILHMVLVNGLSKKGQFLKASKMLEEMKKK 794
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 117/279 (41%), Gaps = 58/279 (20%)
Query: 109 KDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIV-------- 160
K+++F F ++K Y KG +K ++ DN YG +
Sbjct: 149 KEFSFSPTVFDMILKVYAEKGLVKNALHVF-------------DNMGNYGRIPSLLSCNS 195
Query: 161 --NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS- 217
+ V G + A + D+M + S + ++ AYC+ +A + E SS
Sbjct: 196 LLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSL 255
Query: 218 GLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTG-----LMEN- 271
GL+L+V TY++LI D + + R M E V +Y +++ G LME
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 272 -HRPELM----------------------AAFLDEV-VGDPRIEVG----THDWNSIIHA 303
H EL+ D V V D IE+G T NS+I+
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
Query: 304 FCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 342
+CK+G+L +A + F RMN +P+ TY +L++GY A
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRA 414
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 136/341 (39%), Gaps = 12/341 (3%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVG--TMSNLGVRPDELTFGFLGYLYAVKGLQE 58
+ PDV C+ + C D V T S+LG+ + +T+ L YA+ G E
Sbjct: 221 VSPDVFTCSIVVNAYC--RSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVE 278
Query: 59 KINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 118
+ + LM E G S V Y++LI GY K G + E + D + G
Sbjct: 279 GMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG--- 335
Query: 119 CAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 178
++ Y R G I+ + + ++ ++ + +I ++N G +A I
Sbjct: 336 -VLMDGYCRTGQIRDAVRVHDNMIEI---GVRTNTTICNSLINGYCKSGQLVEAEQIFSR 391
Query: 179 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 238
MN Y ++ YC+ EA L ++ + V TY+ L++
Sbjct: 392 MNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA 451
Query: 239 FQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWN 298
F SL++ M + V + S T++ L + + V+ + T N
Sbjct: 452 FHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL-TDTITLN 510
Query: 299 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
+I CK ++ +A+ +N + +P QTY +L +GY
Sbjct: 511 VMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGY 551
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 18/283 (6%)
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACVSMGLSDKAHSI 175
T VV Y R GN+ A++ E S N + Y ++N +G + +
Sbjct: 227 TCSIVVNAYCRSGNVDKAMVF---AKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRV 283
Query: 176 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 235
L M+ G S + Y ++K YCK+ EA + + L D Y L++
Sbjct: 284 LRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 236 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV---VGDPRIEV 292
+ + A + +M E V + TI L+ + +++ + D ++
Sbjct: 344 TGQIRDAVRVHDNMIEIGVR----TNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKP 399
Query: 293 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 352
H +N+++ +C+AG +++A + +M + P TY L+ GY +VL LW
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLW 459
Query: 353 NDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 395
+ + +G+ D L A+ K G F+ AM++ E
Sbjct: 460 KMMLK-------RGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 136/342 (39%), Gaps = 21/342 (6%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELT-FGFLGYLYAVKGLQEKIN 61
P+V N + G C +L V +A ++ M + G PD+++ + +GYL K + E +
Sbjct: 310 PNVVTYNCMIRGYC-DLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRD 368
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
++ + E G +V Y+ LI K + L L D K + + A+
Sbjct: 369 LMKKMAKEHGLVPDQVTYNTLIHMLTKHDH----ADEALWFLKDAQEKGFRIDKLGYSAI 424
Query: 122 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 181
V ++G + +LINE L + D +VN +G DKA +L M+
Sbjct: 425 VHALCKEGRMSEAKDLINEM--LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHT 482
Query: 182 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 241
G Y +L C+ ++ EA ++ + TY ++
Sbjct: 483 HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSE 542
Query: 242 AFSLFRDMREARVPDLKGSYL------TIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 295
A + R+M LKG + ++ L + R F++E + + +
Sbjct: 543 ACDVVREMV------LKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL-NKGCAINVV 595
Query: 296 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 337
++ ++IH FC+ L+ A M + + TY +L++
Sbjct: 596 NFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVD 637
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 103/229 (44%), Gaps = 12/229 (5%)
Query: 116 ETFCAVVKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAH 173
E F V+ Y R G ++ ++ Q+ +EP+ + + +I + V +KA
Sbjct: 243 EAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTI-----DVFVRANRLEKAL 297
Query: 174 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 233
L+ M +G + Y +++ YC +R EA L+ ++ S G D +Y ++
Sbjct: 298 RFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYL 357
Query: 234 MSSQDFQSAFSLFRDMREAR--VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIE 291
+ L + M + VPD + +Y T++ L ++ + FL + +
Sbjct: 358 CKEKRIVEVRDLMKKMAKEHGLVPD-QVTYNTLIHMLTKHDHADEALWFLKD-AQEKGFR 415
Query: 292 VGTHDWNSIIHAFCKAGRLEDARRTFRRM-NFLQFEPNDQTYLSLINGY 339
+ +++I+HA CK GR+ +A+ M + P+ TY +++NG+
Sbjct: 416 IDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGF 464
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 97/234 (41%), Gaps = 10/234 (4%)
Query: 170 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS-GLQLDVETYDA 228
++A +L++M++ G Y I+ CKE R E L+ +++ GL D TY+
Sbjct: 329 EEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNT 388
Query: 229 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 288
LI A +D +E K Y I+ L + R ++E++
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG 448
Query: 289 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNV 348
+ ++++ FC+ G ++ A++ + M+ +PN +Y +L+NG K
Sbjct: 449 HCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA 508
Query: 349 LMLWNDVKRKLSSDGH-------KGIKFDHNLVDA--FLYAMVKGGFFDAAMQV 393
+ N + S G++ + L +A + MV GFF +++
Sbjct: 509 REMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI 562
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/334 (17%), Positives = 146/334 (43%), Gaps = 15/334 (4%)
Query: 10 AALEGCCCELESVTDAERVVGTMSNLG-VRPDELTFGFLGYLYAVKGLQEKINELEVLMG 68
+A+ C+ +++A+ ++ M + G PD +T+ + + G +K +L +M
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMH 481
Query: 69 EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRK 128
G V Y+ L++G ++G S+E+ + ++S+E W+ T+ ++ R+
Sbjct: 482 THGHKPNTVSYTALLNGMCRTGK--SLEAREMMNMSEEHW--WSPNSITYSVIMHGLRRE 537
Query: 129 GNIKGLANLINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSV 186
G + +++ E + P ++ + ++ + G + +A ++E G ++
Sbjct: 538 GKLSEACDVVREMVLKGFFPGPVEINL-----LLQSLCRDGRTHEARKFMEECLNKGCAI 592
Query: 187 GLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF 246
+ + ++ +C+ + A ++ ++ DV TY L++T A L
Sbjct: 593 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELM 652
Query: 247 RDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCK 306
+ M + +Y T++ + + + + A L++++ + +N +I C
Sbjct: 653 KKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRT---IYNQVIEKLCV 709
Query: 307 AGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV 340
G+LE+A ++ + +T +L+ GY+
Sbjct: 710 LGKLEEADTLLGKVLRTASRSDAKTCYALMEGYL 743
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 131/310 (42%), Gaps = 14/310 (4%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 76
C+ V A + M G +P+E TFG L Y GL +K EL M FG K
Sbjct: 158 CDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNK 217
Query: 77 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 136
V Y+ ++S + + G E + + + D TF + + ++G + +
Sbjct: 218 VIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDI----VTFNSRISALCKEGKVLDASR 273
Query: 137 LINEAQKLEPSNIKADNSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPIL 195
+ ++ + E + NSI Y + + +GL + A ++ + + L Y L
Sbjct: 274 IFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWL 333
Query: 196 KAYCKENRTAEATILVMEISSSGLQLDVETY----DALIETSMSSQDFQSAFSLFRDMRE 251
+ + + EA ++ +++ G+ + +Y D L + M S D ++ L + R
Sbjct: 334 QGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLS-DAKTIVGLMK--RN 390
Query: 252 ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLE 311
PD +Y ++ G + + + L E++ + + + N ++H+ K GR+
Sbjct: 391 GVCPD-AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP-NAYTCNILLHSLWKMGRIS 448
Query: 312 DARRTFRRMN 321
+A R+MN
Sbjct: 449 EAEELLRKMN 458
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 142/338 (42%), Gaps = 23/338 (6%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
P + + N ++G C +L ++DA+ +VG M GV PD +T+G L + Y G +
Sbjct: 359 PSIYSYNILMDGLC-KLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKS 417
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF-CAV 121
L M C + L+ K G ++ E +LR ++++ +G +T C +
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE-LLRKMNEK-----GYGLDTVTCNI 471
Query: 122 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 181
+ + + G L + ++ + ++G + N+ + GL D + L E N
Sbjct: 472 IVD-----GLCGSGELDKAIEIVKGMRVHGSAALG-NLGNSYI--GLVDDS---LIENNC 520
Query: 182 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 241
L + Y +L CK R AEA L E+ LQ D Y+ I S
Sbjct: 521 LPDLI---TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISS 577
Query: 242 AFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSII 301
AF + +DM + +Y +++ GL ++ + +DE + + I +N+ I
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDE-MKEKGISPNICTYNTAI 636
Query: 302 HAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
C+ ++EDA M PN ++ LI +
Sbjct: 637 QYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 165/398 (41%), Gaps = 66/398 (16%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMS---NLGV-RPDELTF-----GF--LGYLY 51
PD+ N+ + C E V DA R+ M LG+ RP+ +T+ GF +G L
Sbjct: 250 PDIVTFNSRISALCKE-GKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLE 308
Query: 52 AVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE----D 107
K L E I E + L Y+ + G V+ G E T+L+ ++D+
Sbjct: 309 DAKTLFESIRENDDLASLQS-------YNIWLQGLVRHGKFIEAE-TVLKQMTDKGIGPS 360
Query: 108 RKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSM 166
+N + C + G+ + L N +++ YG +++ S+
Sbjct: 361 IYSYNILMDGLCKL-----------GMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 167 GLSDKAHSILDEM---NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDV 223
G D A S+L EM N L + + +L + K R +EA L+ +++ G LD
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNI---LLHSLWKMGRISEAEELLRKMNEKGYGLDT 466
Query: 224 ETYDALIETSMSSQDFQSAFSLFRDMR---EARVPDLKGSYL------------------ 262
T + +++ S + A + + MR A + +L SY+
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLIT 526
Query: 263 --TIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRM 320
T++ GL + R E++G+ +++ + +N IH FCK G++ A R + M
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAEMMGE-KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Query: 321 NFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 358
+ +TY SLI G + F + L +++K K
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 127/320 (39%), Gaps = 28/320 (8%)
Query: 4 DVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINEL 63
D CN ++G C E + A +V M G G LG Y I +
Sbjct: 465 DTVTCNIIVDGLCGSGE-LDKAIEIVKGMRVHG----SAALGNLGNSY--------IGLV 511
Query: 64 EVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVK 123
+ + E C + YS L++G K+G A ++ + ++ + D + +
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPD----SVAYNIFIH 567
Query: 124 EYLRKGNIKGLANLINEAQKLE-PSNIKADNSI--GYGIVNACVSMGLSDKAHSILDEMN 180
+ ++G I ++ + +K +++ NS+ G GI N + H ++DEM
Sbjct: 568 HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI------HGLMDEMK 621
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G S + Y ++ C+ + +AT L+ E+ + +V ++ LIE DF
Sbjct: 622 EKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFD 681
Query: 241 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSI 300
A +F + K ++M + L A L E V D E+GT + +
Sbjct: 682 MAQEVFE--TAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDL 739
Query: 301 IHAFCKAGRLEDARRTFRRM 320
+ + CK LE A +M
Sbjct: 740 VESLCKKDELEVASGILHKM 759
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 6/211 (2%)
Query: 159 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 218
++N + G +AHSI + + G L Y ++ A ++ L+ ++ +G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 219 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 278
L+ D ++A+I S S + A +F M+E+ ++ T++ G + + E +
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 279 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 338
LD ++ D ++ N ++ A+C ++E+A +M +P+ T+ +L
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 339 YV------SAEKHFNVLMLWNDVKRKLSSDG 363
Y +AE ML N VK + + G
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCG 535
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 151/379 (39%), Gaps = 54/379 (14%)
Query: 36 GVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASM 95
G++PD + F + + G ++ ++ M E GC ++ LI GY K G L
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 96 ESTILRSLSDE-----DR----------------KDWN-------FGGE----TFCAVVK 123
+ L DE DR + WN +G + TF + K
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 124 EYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALG 183
Y R G+ ++I ++ + +K + IVN G ++A M LG
Sbjct: 504 AYARIGSTCTAEDMI--IPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG 561
Query: 184 GSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAF 243
L V+ ++K + N +V + G++ DV T+ L+ S D +
Sbjct: 562 VHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCE 621
Query: 244 SLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVG---DPRIEVGTHDWNS 299
++ DM E + PD+ ++ + G PE L+++ P + + T
Sbjct: 622 EIYTDMLEGGIDPDIH-AFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQ---- 676
Query: 300 IIHAFCKAGRLEDARRTFRRM-NFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 358
II +C AG ++ A + +++M + PN TY +LI G+ A++ + L D++ K
Sbjct: 677 IISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 736
Query: 359 ----------LSSDGHKGI 367
L +DG K I
Sbjct: 737 NVVPTRKTMQLIADGWKSI 755
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 20/269 (7%)
Query: 80 SNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLIN 139
+ L++G ++ G S I +L +E K T+ +V R+ + L +LI+
Sbjct: 323 TKLMNGLIERGRPQEAHS-IFNTLIEEGHKPSLI---TYTTLVTALTRQKHFHSLLSLIS 378
Query: 140 EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC 199
K+E + +K D + I+NA G D+A I ++M G + ++K Y
Sbjct: 379 ---KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG 435
Query: 200 KENRTAEAT-ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDL 257
K + E++ +L M + LQ + T + L++ + + + A+++ M+ V PD+
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 258 KGSYLTIMTGLMENHRPELMAAFLDEVVGDPR-----IEVGTHDWNSIIHAFCKAGRLED 312
+T T R D ++ PR ++ +I++ +C+ G++E+
Sbjct: 496 ----VTFNTLAKAYARIGSTCTAEDMII--PRMLHNKVKPNVRTCGTIVNGYCEEGKMEE 549
Query: 313 ARRTFRRMNFLQFEPNDQTYLSLINGYVS 341
A R F RM L PN + SLI G+++
Sbjct: 550 ALRFFYRMKELGVHPNLFVFNSLIKGFLN 578
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 157/397 (39%), Gaps = 59/397 (14%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL-GYLYAVKGLQEKI 60
+PDV A NA + G C++ + DA RV+ M + PD +T+ + G L + L +
Sbjct: 155 QPDVFAYNALING-FCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
L L+ + C + Y+ LI E+T+L DE K
Sbjct: 214 KVLNQLLSD-NCQPTVITYTILI------------EATMLEGGVDEALK----------- 249
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
++ E L +G +K D I+ G+ D+A ++ +
Sbjct: 250 LMDEMLSRG-------------------LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 290
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G + Y +L+A + + E L+ ++ S +V TY LI T +
Sbjct: 291 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 241 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGTHDW 297
A +L + M+E + SY ++ R ++ FL+ ++ D P I ++
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV----NY 406
Query: 298 NSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKR 357
N+++ CK G+ + A F ++ + PN +Y ++ + S+ L + ++
Sbjct: 407 NTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM- 465
Query: 358 KLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVV 394
GI D ++ + + + G D A +++
Sbjct: 466 ------SNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 118/292 (40%), Gaps = 18/292 (6%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+KPD+ N + G C E V A +V + G PD +++ L +G E+
Sbjct: 259 LKPDMFTYNTIIRGMCKE-GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
+L M C V YS LI+ + G + E+ L L E K ++
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE--EAMNLLKLMKE--KGLTPDAYSYDP 373
Query: 121 VVKEYLRKGN----IKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSM-GLSDKAHSI 175
++ + R+G I+ L +I++ + + Y V A + G +D+A I
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGC--------LPDIVNYNTVLATLCKNGKADQALEI 425
Query: 176 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 235
++ +G S Y + A A +++E+ S+G+ D TY+++I
Sbjct: 426 FGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485
Query: 236 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD 287
AF L DMR +Y ++ G + HR E L+ +VG+
Sbjct: 486 EGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 103/484 (21%), Positives = 187/484 (38%), Gaps = 68/484 (14%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+ PDV + GCC + +DA ++ M G PD + + L A GL ++
Sbjct: 427 IAPDVINYTTLIGGCCLQ-GKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEA 485
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
E +M G V ++ +I G + +G L E+ SL + R++ + FCA
Sbjct: 486 FETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEA-FYESLEHKSRENDASMVKGFCA 544
Query: 121 VVKEYLRKGNIKGLANLINEA-QKLEPSNIKADNSIGYGIVNA-CVSMGLSDKAHSILDE 178
A ++ A ++ S+ + + + C KA +LD
Sbjct: 545 --------------AGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDR 590
Query: 179 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 238
M LG +Y ++ A+C+ N +A + + + D+ TY +I T +
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNE 650
Query: 239 FQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPEL-----MAAFLDEVVGDPRIEV 292
+ A++LF DM+ V PD+ + ++ N PEL M AF +V+ D
Sbjct: 651 PKQAYALFEDMKRRDVKPDV------VTYSVLLNSDPELDMKREMEAF--DVIPD----- 697
Query: 293 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY----VSAEK---- 344
+ +I+ +C L+ F+ M + P+ TY L+ +S E
Sbjct: 698 -VVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFD 756
Query: 345 ------HFNVLMLWN-------DVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAM 391
++ VL+ W + KR G+ D A + K G+ A
Sbjct: 757 VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAK 816
Query: 392 QVVEKSHEMKIFVDKWRY--------KQAFMETHKKLKVAKLRKRNTKKMEAVIAFKNWA 443
+ ++ E + D Y + F+ KL V ++ ++ K +A ++ ++A
Sbjct: 817 MIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKL-VKEMLEKGIKPTKASLSAVHYA 875
Query: 444 GLNA 447
L A
Sbjct: 876 KLKA 879
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 163/394 (41%), Gaps = 61/394 (15%)
Query: 5 VAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELE 64
+ +CN L+G ++ + A R++ + + G P+ +TF L + +G ++ +L
Sbjct: 252 IVSCNKVLKGL--SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLF 309
Query: 65 VLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 124
+M + G + YS LI GY K+G L ++L + D F + +
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV----VVFSSTIDV 365
Query: 125 YLRKGN--------------------------IKGLAN--LINEA---------QKLEPS 147
Y++ G+ IKGL I EA + +EPS
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 148 NIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEA 207
+ + +++ G ++ ++M +G + +Y ++ K+ A
Sbjct: 426 IVTYSS-----LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 208 TILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIM- 265
+++ ++L+V +++LI+ F A +FR M + PD+ ++ T+M
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV-ATFTTVMR 539
Query: 266 TGLMEN----HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMN 321
+ME+ H + L +++ +I N +IH K R+EDA + F +
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Query: 322 FLQFEPNDQTYLSLINGYVS------AEKHFNVL 349
+ EP+ TY ++I GY S AE+ F +L
Sbjct: 600 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 633
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 129/314 (41%), Gaps = 44/314 (14%)
Query: 34 NLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLA 93
N+ V P+ TF L + K E+ E+ M E G V Y+ + + YV+ G
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETV 240
Query: 94 SMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLE-PSNIKAD 152
ES ++ + +++ N G T VV Y R+G ++ + +++ +N+
Sbjct: 241 RAESEVVEKMVMKEKAKPN--GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 153 NSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVM 212
NS+ G V G+ D+ +++ E N
Sbjct: 299 NSLINGFVEVMDRDGI-DEVLTLMKECN-------------------------------- 325
Query: 213 EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENH 272
++ DV TY ++ S+ + A +F++M +A V +Y + G +
Sbjct: 326 ------VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 379
Query: 273 RPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 332
P+ L+ ++ + R V + ++I +C G ++DA R F +M PN +T+
Sbjct: 380 EPKKAEELLETLIVESRPNVVI--FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTF 437
Query: 333 LSLINGYVSAEKHF 346
+L+ GY+ ++ +
Sbjct: 438 ETLMWGYLEVKQPW 451
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Query: 159 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 218
++N + G +A ++ + G L Y +L A + + + +V E+ SG
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 219 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 278
+LD ++A+I S + + A M+E + +Y T++ G +PE +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 279 AFLDEVVGDPRIEVGTH--DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
LD ++ + ++VG + +N ++ A+CK ++E+A ++M P+ TY ++
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 337 NGYV 340
YV
Sbjct: 231 TCYV 234
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 129/302 (42%), Gaps = 21/302 (6%)
Query: 98 TILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY 157
T+ ++L++ + T A + + G+I + + ++E S K D+
Sbjct: 66 TVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS------EVEQSGTKLDSIFFN 119
Query: 158 GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC---KENRTAEATILVMEI 214
++NA G + A L +M LG + Y ++K Y K R++E L++E
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 215 SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM---EN 271
+ + ++ T++ L++ + + A+ + + M E V +Y TI T + E
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 272 HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 331
R E + ++++V + + ++ +C+ GR+ D R RRM ++ E N
Sbjct: 240 VRAE--SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV 297
Query: 332 YLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAM 391
+ SLING+V +M + + L+ +K D + A G+ + A
Sbjct: 298 FNSLINGFVE-------VMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAA 350
Query: 392 QV 393
QV
Sbjct: 351 QV 352
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 123/279 (44%), Gaps = 21/279 (7%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG----LQE 58
P++ N ++ C + + V +A VV M GVRPD +T+ + Y KG +
Sbjct: 186 PNIRTFNVLVQAWC-KKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAES 244
Query: 59 KINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 118
++ E +++M E N + ++ GY + G + + R E R + N F
Sbjct: 245 EVVE-KMVMKEKAKPNGRTC-GIVVGGYCREGRVRDGLRFVRR--MKEMRVEANL--VVF 298
Query: 119 CAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 178
+++ ++ + G+ ++ ++ N+KAD ++NA S G +KA + E
Sbjct: 299 NSLINGFVEVMDRDGIDEVLT---LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKE 355
Query: 179 MNALGGSVGLGVYIPILKAY--CKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 236
M G Y + K Y KE + AE + + + S + +V + +I S+
Sbjct: 356 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES---RPNVVIFTTVISGWCSN 412
Query: 237 QDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRP 274
A +F M + V P++K ++ T+M G +E +P
Sbjct: 413 GSMDDAMRVFNKMCKFGVSPNIK-TFETLMWGYLEVKQP 450
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Query: 149 IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 208
I+ D I G++ + + +A ++ M A G V + Y ++ CK+ + EA
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 209 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 268
+ +++ L+ DV TY L+ Q+F+ + +M R + + +++ GL
Sbjct: 283 GIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGL 342
Query: 269 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 328
+ + E + VV D + +N++I + CK + +A F RM + PN
Sbjct: 343 RKRGKIEEALNLVKRVV-DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 329 DQTYLSLINGY 339
D TY LI+ +
Sbjct: 402 DVTYSILIDMF 412
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 168/435 (38%), Gaps = 65/435 (14%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++P V + + G C + + A R+ M+ G+ P TF L GL
Sbjct: 468 LEPTVVTYTSLMGGYCSK-GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
+L M E+ +V Y+ +I GY + G++ S L+ ++++
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM-SKAFEFLKEMTEKG------------I 573
Query: 121 VVKEYLRKGNIKGLANLINEAQK-------LEPSNIKADNSIGYGIVNACVSMGLSDKAH 173
V Y + I GL L +A + L N + + G+++ G ++A
Sbjct: 574 VPDTYSYRPLIHGLC-LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 174 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 233
S+ EM G + L Y ++ K L+ E+ GL+ D Y ++I+
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK 692
Query: 234 MSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMEN---HRPELMAA---------- 279
+ DF+ AF ++ M E VP+ + +Y ++ GL + + E++ +
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPN-EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPN 751
Query: 280 ------FLD-----EVVGDPRIEV----------GTHDWNSIIHAFCKAGRLEDARRTFR 318
FLD EV +E+ T +N +I FC+ GR+E+A
Sbjct: 752 QVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELIT 811
Query: 319 RMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFL 378
RM P+ TY ++IN + LWN + KGI+ D + +
Sbjct: 812 RMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT-------EKGIRPDRVAYNTLI 864
Query: 379 YAMVKGGFFDAAMQV 393
+ G A ++
Sbjct: 865 HGCCVAGEMGKATEL 879
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 160/408 (39%), Gaps = 53/408 (12%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTF-GFLGYLYAVKGLQEKIN 61
P+V +A L G + A + M ++G+RPD + G + L +K L +
Sbjct: 190 PEVRTLSALLHGLV-KFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLS-RAK 247
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
E+ M GC V Y+ LI G K + E+ ++ D KD T+C +
Sbjct: 248 EMIAHMEATGCDVNIVPYNVLIDGLCKKQKV--WEAVGIKK--DLAGKDLKPDVVTYCTL 303
Query: 122 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 181
V GL + Q+ E +GL ++DEM
Sbjct: 304 VY---------GLC----KVQEFE--------------------IGLE-----MMDEMLC 325
Query: 182 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 241
L S +++ K + EA LV + G+ ++ Y+ALI++ + F
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385
Query: 242 AFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSII 301
A LF M + + +Y ++ + + +FL E+V D +++ + +NS+I
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV-DTGLKLSVYPYNSLI 444
Query: 302 HAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSS 361
+ CK G + A M + EP TY SL+ GY S K L L++++
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT----- 499
Query: 362 DGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
KGI L + + G A+++ + E + ++ Y
Sbjct: 500 --GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/318 (19%), Positives = 128/318 (40%), Gaps = 12/318 (3%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 76
C+ ++ AE + M N + P +T+ L Y KG K L M G +
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 77 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE--TFCAVVKEYLRKGNIKGL 134
++ L+SG ++G + + +WN T+ +++ Y +G++
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLF------NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 135 ANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 194
+ E + I D +++ G + +A +D ++ + Y +
Sbjct: 562 FEFLKE---MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 195 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 254
L +C+E + EA + E+ G+ LD+ Y LI+ S+ +D + F L ++M + +
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 255 PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDAR 314
Y +++ + + D ++ + + + ++I+ CKAG + +A
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP-NEVTYTAVINGLCKAGFVNEAE 737
Query: 315 RTFRRMNFLQFEPNDQTY 332
+M + PN TY
Sbjct: 738 VLCSKMQPVSSVPNQVTY 755
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 158/396 (39%), Gaps = 53/396 (13%)
Query: 38 RPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMES 97
+P+E + + L +GL +K E+ M G S Y+ LI+ Y ++G
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRY----E 193
Query: 98 TILRSLSDEDRKDWNFGGETFCAVVKEYLRKG-NIKGLANLINEAQKLEPSNIKADNSIG 156
T L L + + T+ V+ R G + +GL L E + I+ D
Sbjct: 194 TSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAE---MRHEGIQPDIVTY 250
Query: 157 YGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISS 216
+++AC GL D+A + MN G L Y +++ + K R + L+ E++S
Sbjct: 251 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 310
Query: 217 SGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA--------------------RVPD 256
G D+ +Y+ L+E S + A +F M+ A R D
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 257 LKGSYLTIMTG-----------LME-----NHRPELMAAFLDEVVGDPRIEVGTHDWNSI 300
++ +L + + L+E + E++ F D V + IE + I
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV--EENIEPDMETYEGI 428
Query: 301 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLS 360
I A K G EDAR+ + M P+ + Y +I + A + L+ +N + S
Sbjct: 429 IFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGS 488
Query: 361 SDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEK 396
+ I+ H+L LY+ +GG + ++ +
Sbjct: 489 ---NPSIETFHSL----LYSFARGGLVKESEAILSR 517
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 163/410 (39%), Gaps = 71/410 (17%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVG---TMSNLGVRPDELTFGFLGYLYAVKGLQ 57
+ P + N + C D E ++G M + G++PD +T+ L A++GL
Sbjct: 207 ISPSILTYNTVINACA---RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLG 263
Query: 58 EKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET 117
++ + M + G YS+L+ + K LR L E
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETFGK-----------LRRL------------EK 300
Query: 118 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 177
C ++ E G++ + + N+ ++ A G +A +
Sbjct: 301 VCDLLGEMASGGSLPDITSY----------NV---------LLEAYAKSGSIKEAMGVFH 341
Query: 178 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 237
+M A G + Y +L + + R + L +E+ SS D TY+ LIE
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGG 401
Query: 238 DFQSAFSLFRDMREARV-PDLKGSYLTIM-----TGLMENHRPELMAAFLDEVVGDPRIE 291
F+ +LF DM E + PD++ +Y I+ GL E+ R L +++V +
Sbjct: 402 YFKEVVTLFHDMVEENIEPDME-TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAY 460
Query: 292 VGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLML 351
G +I AF +A E+A F M+ + P+ +T+ SL+ + L
Sbjct: 461 TG------VIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGG-------L 507
Query: 352 WNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQV---VEKSH 398
+ + LS GI + + +A + A +GG F+ A++ +EKS
Sbjct: 508 VKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/429 (19%), Positives = 163/429 (37%), Gaps = 52/429 (12%)
Query: 1 MKPDVAACNAALEGCCCELESVTD-AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEK 59
++PD+ N L C + + D AE V TM++ G+ PD T+ L + EK
Sbjct: 243 IQPDIVTYNTLLSACA--IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300
Query: 60 INELEVLMGEFGCSNKKVFYSNLISGYVKSGNL------------------ASMESTILR 101
+ +L M G Y+ L+ Y KSG++ A+ S +L
Sbjct: 301 VCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN 360
Query: 102 SLSDEDRKD-------------WNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSN 148
R D + T+ +++ + G K + L ++ + N
Sbjct: 361 LFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD---MVEEN 417
Query: 149 IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 208
I+ D GI+ AC GL + A IL M A Y +++A+ + EA
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Query: 209 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 268
+ + G +ET+ +L+ + + + ++ + ++ +P + ++ +
Sbjct: 478 VAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAY 537
Query: 269 MENHR-PELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEP 327
+ + E + ++D + R + +++ + A +++ R F M P
Sbjct: 538 KQGGKFEEAVKTYVD--MEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILP 595
Query: 328 NDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGF- 386
+ Y ++ Y E+ W+DV L + H ++ M+KG +
Sbjct: 596 SIMCYCMMLAVYGKTER-------WDDVNELLEEMLSNRVSNIHQVIG----QMIKGDYD 644
Query: 387 FDAAMQVVE 395
D+ Q+VE
Sbjct: 645 DDSNWQIVE 653
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 156/403 (38%), Gaps = 40/403 (9%)
Query: 11 ALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQE--KINELEVLMG 68
AL G C + A ++ M G + D F+ Y ++ L KI+ + +L
Sbjct: 202 ALIGACARNNDIEKALNLIAKMRQDGYQSD-----FVNYSLVIQSLTRSNKIDSVMLLRL 256
Query: 69 EFGCSNKKV-----FYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVK 123
K+ +++I G+ KSG+ S L+ L + T +++
Sbjct: 257 YKEIERDKLELDVQLVNDIIMGFAKSGD----PSKALQLLGMAQATGLSAKTATLVSIIS 312
Query: 124 EYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALG 183
G L E L S IK ++ V G A S++ EM G
Sbjct: 313 ALADSGRTLEAEALFEE---LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 184 GSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAF 243
S Y ++ AY R A I++ E+ + +Q + + L+ ++Q F
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 244 SLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIH 302
+ ++M+ V PD + + I T N M F D ++ + IE WN++I
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTF-DRMLSEG-IEPDRVTWNTLID 487
Query: 303 AFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSD 362
CK GR A F M P TY +IN Y E+ W+D+KR L
Sbjct: 488 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER-------WDDMKRLLGKM 540
Query: 363 GHKGIKFD----HNLVDAFLYAMVKGGFFDAAMQVVEKSHEMK 401
+GI + LVD + K G F+ A++ +E EMK
Sbjct: 541 KSQGILPNVVTHTTLVDVY----GKSGRFNDAIECLE---EMK 576
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 132/324 (40%), Gaps = 24/324 (7%)
Query: 62 ELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 118
E E L E G + Y+ L+ GYVK+G L ES + S+ +++ + T+
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMV----SEMEKRGVSPDEHTY 377
Query: 119 CAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 178
++ Y+ G + ++ E +E +++ ++ + ++ G K +L E
Sbjct: 378 SLLIDAYVNAGRWESARIVLKE---MEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Query: 179 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 238
M ++G Y ++ + K N A + S G++ D T++ LI+
Sbjct: 435 MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Query: 239 FQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIE-VGTHDW 297
A +F M +Y ++ + R + M L ++ + V TH
Sbjct: 495 HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTH-- 552
Query: 298 NSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVS---AEKHFNVLMLWND 354
+++ + K+GR DA M + +P+ Y +LIN Y +E+ N
Sbjct: 553 TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF----- 607
Query: 355 VKRKLSSDGHKGIKFDHN-LVDAF 377
R ++SDG K N L++AF
Sbjct: 608 --RVMTSDGLKPSLLALNSLINAF 629
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 10/210 (4%)
Query: 135 ANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 194
A L+++ Q L P A ++ AC +KA +++ +M G Y +
Sbjct: 186 AFLLSQKQTLTPLTYNA-------LIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLV 238
Query: 195 LKAYCKENRTAEATILVM--EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 252
+++ + N+ +L + EI L+LDV+ + +I S D A L +
Sbjct: 239 IQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQAT 298
Query: 253 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 312
+ + ++I++ L ++ R L A L E + I+ T +N+++ + K G L+D
Sbjct: 299 GLSAKTATLVSIISALADSGR-TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKD 357
Query: 313 ARRTFRRMNFLQFEPNDQTYLSLINGYVSA 342
A M P++ TY LI+ YV+A
Sbjct: 358 AESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 141/363 (38%), Gaps = 25/363 (6%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+KP A NA L+G + + DAE +V M GV PDE T+ L Y G E
Sbjct: 335 IKPRTRAYNALLKGYV-KTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA 393
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGN-------LASMESTILRSLSDEDRKDWNF 113
+ M +S L++G+ G L M+S ++ DR+ +N
Sbjct: 394 RIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP----DRQFYNV 449
Query: 114 GGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAH 173
+TF G L + + ++ I+ D +++ G A
Sbjct: 450 VIDTF----------GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAE 499
Query: 174 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 233
+ + M G Y ++ +Y + R + L+ ++ S G+ +V T+ L++
Sbjct: 500 EMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVY 559
Query: 234 MSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPE-LMAAFLDEVVGDPRIEV 292
S F A +M+ + Y ++ + E + AF V+ ++
Sbjct: 560 GKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF--RVMTSDGLKP 617
Query: 293 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 352
NS+I+AF + R +A + M +P+ TY +L+ + +K V +++
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 677
Query: 353 NDV 355
++
Sbjct: 678 EEM 680
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 128/355 (36%), Gaps = 62/355 (17%)
Query: 50 LYAVKGLQEKINELEVLMGEFGCSNKKVF----YSNLISGYVKSGNLASMESTILRSLSD 105
LY++ L + E L F S K+ Y+ LI ++ ++ + I + D
Sbjct: 169 LYSI--LIHALGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQD 226
Query: 106 EDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVS 165
+ D+ + V++ R I + L+ +++E ++ D + I+
Sbjct: 227 GYQSDF----VNYSLVIQSLTRSNKIDSVM-LLRLYKEIERDKLELDVQLVNDIIMGFAK 281
Query: 166 MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVET 225
G KA +L A G S + I+ A RT EA L E+ SG++
Sbjct: 282 SGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRA 341
Query: 226 YDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEV 284
Y+AL++ + + + A S+ +M + V PD
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPD---------------------------- 373
Query: 285 VGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA-- 342
H ++ +I A+ AGR E AR + M +PN + L+ G+
Sbjct: 374 ---------EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGE 424
Query: 343 -EKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEK 396
+K F VL + G+K D + + K D AM ++
Sbjct: 425 WQKTFQVLKEMKSI----------GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDR 469
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 150/388 (38%), Gaps = 73/388 (18%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
MKPD A N + C EL + +AE+ V M GV P T+ L Y K +K
Sbjct: 420 MKPDHLAYNCLIRRFC-ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
++ M + G V Y LI+ K L +E+ I++
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKL--LEAQIVK------------------- 517
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
+ +E + I +++ C S G + A EM
Sbjct: 518 ---------------------RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G + L Y ++ + +EA L++EIS GL+ DV TY++LI + + Q
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616
Query: 241 SAFSLFRDMREARV-PDLKGSYLTIMTGLME------------NHRPELMA--------- 278
+L+ +M+ + + P LK +L I E + +P+L+
Sbjct: 617 RCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYA 676
Query: 279 -------AF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQ 330
AF L + + + I + +NS+I K G+L + R MN + EP
Sbjct: 677 VHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEAD 736
Query: 331 TYLSLINGYVSAEKHFNVLMLWNDVKRK 358
TY ++ G+ + + + + + +++ K
Sbjct: 737 TYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 167/437 (38%), Gaps = 60/437 (13%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
P V N ++G C + + + DAE++ M + P +T+ L Y G EK +
Sbjct: 212 PSVFIYNVLIDGLC-KGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFK 270
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 122
+ M + ++ L+ G K+G + E+ + ++ KD F + F +
Sbjct: 271 VRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVL------KEMKDLGFVPDAFTFSI 324
Query: 123 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNAL 182
N K A L ++ S +K + ++NA G +KA IL A
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVD-SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 183 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLD-------------------- 222
G +Y ++ YC++ A + + + G++ D
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 223 ---------------VETYDALIETSMSSQDFQSAFSLFRDMRE-ARVPDLKGSYLTIMT 266
VETY+ LI +F F + ++M + +P++ SY T++
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV-SYGTLIN 502
Query: 267 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFE 326
L + + L A + + D + +N +I C G++EDA R + M E
Sbjct: 503 CLCKGSKL-LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Query: 327 PNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLY-AMVKG- 384
N TY +LI+G K L ++ R KG+K D F Y +++ G
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISR-------KGLK-----PDVFTYNSLISGY 609
Query: 385 GFFDAAMQVVEKSHEMK 401
GF + + EMK
Sbjct: 610 GFAGNVQRCIALYEEMK 626
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 149/389 (38%), Gaps = 63/389 (16%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEKINELEVLMGEF---G 71
C+L V A V M PD T+ L + GL +E+I+E +L+ E G
Sbjct: 198 CKLRFVDRAIEVFRGMPERKCLPDGYTYCTL-----MDGLCKEERIDEAVLLLDEMQSEG 252
Query: 72 CSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNI 131
CS V Y+ LI G K G+L + +V KG +
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLTRVTK-----------------------LVDNMFLKGCV 289
Query: 132 KGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVY 191
P+ + N++ +G+ C+ G DKA S+L+ M + Y
Sbjct: 290 --------------PNEVTY-NTLIHGL---CLK-GKLDKAVSLLERMVSSKCIPNDVTY 330
Query: 192 IPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE 251
++ K+ R +A L+ + G L+ Y LI + A SL+R M E
Sbjct: 331 GTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE 390
Query: 252 ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLE 311
Y ++ GL +P L+ ++ + + ++S++ F K G E
Sbjct: 391 KGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP-NAYTYSSLMKGFFKTGLCE 449
Query: 312 DARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDH 371
+A + ++ M+ N Y LI+G + +M+W+ + GIK D
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKML-------TIGIKPDT 502
Query: 372 NLVDAFLYAMVKGGFFDAAMQVVEKSHEM 400
+ + + G DAA+++ HEM
Sbjct: 503 VAYSSIIKGLCGIGSMDAALKLY---HEM 528
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 143/342 (41%), Gaps = 18/342 (5%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
PD ++G C E E + +A ++ M + G P + + L KG ++ +
Sbjct: 220 PDGYTYCTLMDGLCKE-ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTK 278
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 122
L M GC +V Y+ LI G G L S + R +S + + G +V
Sbjct: 279 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338
Query: 123 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNAL 182
K+ ++ L+++ E + I +++ G +++A S+ +M
Sbjct: 339 KQRRATDAVRLLSSM-------EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK 391
Query: 183 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSA 242
G + VY ++ C+E + EA ++ + +SG + TY +L++ + + A
Sbjct: 392 GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451
Query: 243 FSLFRDMREARVPDLKGSYLTIMTGLMENHRPE--LMAAFLDEVVGDPRIEVGTHDWNSI 300
++++M + K Y ++ GL R + +M +G I+ T ++SI
Sbjct: 452 VQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG---IKPDTVAYSSI 508
Query: 301 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQ----TYLSLING 338
I C G ++ A + + M Q EP Q TY L++G
Sbjct: 509 IKGLCGIGSMDAALKLYHEM-LCQEEPKSQPDVVTYNILLDG 549
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 144/352 (40%), Gaps = 33/352 (9%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
PDV ++G C + V DA ++ M G+ PD +T+ L A G +E++ E
Sbjct: 421 PDVINYTTLIDGYCLQ-GKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLE 479
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMES--TILRSLSDEDRKDWNFGGETFCA 120
+ M G V S +I G + + E + L E++ + G +C
Sbjct: 480 IYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKG---YC- 535
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
+ L K K L +K S+ + + G +KAH +L +M+
Sbjct: 536 --EAGLSKKAYKAFVRLEYPLRK----------SVYIKLFFSLCIEGYLEKAHDVLKKMS 583
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
A G + ++ A+CK N EA +L + GL D+ TY +I T + Q
Sbjct: 584 AYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQ 643
Query: 241 SAFSLFRDMREARV-PDLKGSYLTIMTGLM----ENHRP-----ELMAAFLDEVVGD--- 287
A SLF DM++ + PD+ +Y ++ + E+H E+ EV+ +
Sbjct: 644 KAESLFEDMKQRGIKPDVV-TYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSA 702
Query: 288 PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
I + + +I CK LE A F RM EP+ Y +LI+ Y
Sbjct: 703 AGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSY 754
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 131/324 (40%), Gaps = 33/324 (10%)
Query: 32 MSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVF-YSNLISGYVKSG 90
+ LG+ +E T+ + VK L K N E M N+ VF Y I+G +G
Sbjct: 207 LKQLGLCANEYTYAIV-----VKALCRKGNLEEAAM--LLIENESVFGYKTFINGLCVTG 259
Query: 91 NLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 150
+ IL + DRK G+ AV+ +R G N + K S I
Sbjct: 260 ETEKAVALILELI---DRK--YLAGDDLRAVLGMVVR-----GFCNEMK--MKAAESVII 307
Query: 151 ADNSIGYGI-VNACVS--------MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKE 201
IG+G+ V AC++ M L + A LD+M G V + IL+ YCK
Sbjct: 308 EMEEIGFGLDVYACLAVIDRYCKNMNLPE-ALGFLDKMLGKGLKVNCVIVSLILQCYCKM 366
Query: 202 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE-ARVPDLKGS 260
+ EA E + LD Y+ + + AF L ++M++ VPD+ +
Sbjct: 367 DMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVI-N 425
Query: 261 YLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRM 320
Y T++ G + +DE++G+ + +N ++ + G E+ + RM
Sbjct: 426 YTTLIDGYCLQGKVVDALDLIDEMIGNG-MSPDLITYNVLVSGLARNGHEEEVLEIYERM 484
Query: 321 NFLQFEPNDQTYLSLINGYVSAEK 344
+PN T +I G A K
Sbjct: 485 KAEGPKPNAVTNSVIIEGLCFARK 508
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 131/326 (40%), Gaps = 55/326 (16%)
Query: 22 VTDAERVVGTMSNLGVRPDELTFG-FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYS 80
V A V+ M G+ PDE FG L L ++E E + +F + + +++
Sbjct: 183 VKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLR--YFT 240
Query: 81 NLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE 140
+L+ G+ + G L + +++ +KE + +I NL++
Sbjct: 241 SLLYGWCREGKLMEAKEVLVQ--------------------MKEAGLEPDIVVFTNLLS- 279
Query: 141 AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 200
GY G A+ ++++M G + Y +++A C+
Sbjct: 280 ---------------GYA------HAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCR 318
Query: 201 -ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 259
E R EA + +E+ G + D+ TY ALI +S+ DMR+ V +
Sbjct: 319 TEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQV 378
Query: 260 SYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD----WNSIIHAFCKAGRLEDARR 315
+Y+ IM + + E L+ + R G H +N +I CK G +++A R
Sbjct: 379 TYMQIMVA---HEKKEQFEECLELIEKMKR--RGCHPDLLIYNVVIRLACKLGEVKEAVR 433
Query: 316 TFRRMNFLQFEPNDQTYLSLINGYVS 341
+ M P T++ +ING+ S
Sbjct: 434 LWNEMEANGLSPGVDTFVIMINGFTS 459
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 152/376 (40%), Gaps = 46/376 (12%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++PD L+ C + SV +A +V M P+ F L Y + +G +
Sbjct: 198 LEPDEYVFGCLLDALC-KNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEA 255
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
E+ V M E G V ++NL+SGY +G +A ++D ++ + +
Sbjct: 256 KEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL----MNDMRKRGFEPNVNCYTV 311
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
+++ R K + + ++E +AD +++ G+ DK +S+LD+M
Sbjct: 312 LIQALCRTE--KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR 369
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G Y+ I+ A+ K+ + E L+ ++ G D+ Y+ +I + + +
Sbjct: 370 KKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVK 429
Query: 241 SAFSLFRDMREARVPDLKGSYLTIMTG------LME--NHRPELMA-------------A 279
A L+ +M + +++ ++ G L+E NH E+++ +
Sbjct: 430 EAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKS 489
Query: 280 FLDEVVGDPRIEVGTHDWNSI-----------------IHAFCKAGRLEDARRTFRRMNF 322
L+ +V D ++E+ W+ I IHA G +++A M
Sbjct: 490 LLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMME 549
Query: 323 LQFEPNDQTYLSLING 338
+ P TY L+ G
Sbjct: 550 MDLMPQPNTYAKLMKG 565
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 14/248 (5%)
Query: 116 ETFCAVVKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAH 173
E F +++ + +K +++E K LEP D + +++A G +A
Sbjct: 168 ELFVVLMRRFASANMVKKAVEVLDEMPKYGLEP-----DEYVFGCLLDALCKNGSVKEAS 222
Query: 174 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 233
+ ++M L + +L +C+E + EA +++++ +GL+ D+ + L+
Sbjct: 223 KVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
Query: 234 MSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL--MENHRPELMAAFLD-EVVGDPRI 290
+ A+ L DMR+ Y ++ L E E M F++ E G
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYG---C 338
Query: 291 EVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLM 350
E + ++I FCK G ++ M P+ TY+ ++ + E+ L
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398
Query: 351 LWNDVKRK 358
L +KR+
Sbjct: 399 LIEKMKRR 406
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 20/236 (8%)
Query: 190 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 249
+++ +++ + N +A ++ E+ GL+ D + L++ + + A +F DM
Sbjct: 169 LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM 228
Query: 250 REARVPDLKGSYLTIMTG------LMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHA 303
RE P+L+ + +++ G LME E++ + E +P I V T+ ++
Sbjct: 229 REKFPPNLR-YFTSLLYGWCREGKLMEAK--EVLVQ-MKEAGLEPDIVVFTN----LLSG 280
Query: 304 FCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG 363
+ AG++ DA M FEPN Y LI EK + M R
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAM------RVFVEME 334
Query: 364 HKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKK 419
G + D A + K G D V++ + + + Y Q + KK
Sbjct: 335 RYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKK 390
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 152/368 (41%), Gaps = 33/368 (8%)
Query: 36 GVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASM 95
GV PD +T+ L Y+ KGL E+ EL M G S Y+ +I+G K G
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 96 ESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSI 155
+ L R + T+ +++ E +KG++ + ++ + ++ D
Sbjct: 325 KEVFAEML----RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSD---MRSRDVVPDLVC 377
Query: 156 GYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEIS 215
+++ G DKA + + G +Y +++ YC++ + A L E+
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 216 SSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE-ARVPDLKGSY-LTIMT------G 267
G +DV TY+ ++ + A LF +M E A PD SY LTI+ G
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD---SYTLTILIDGHCKLG 494
Query: 268 LMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEP 327
++N A L + + + RI + +N+++ F K G ++ A+ + M + P
Sbjct: 495 NLQN------AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 328 NDQTYLSLINGYVSAEKHFNVLMLWNDVKRK-------LSSDGHKGIKFDHNLVD--AFL 378
+Y L+N S +W+++ K + + KG N D +FL
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 379 YAMVKGGF 386
M+ GF
Sbjct: 609 EKMISEGF 616
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 132/344 (38%), Gaps = 85/344 (24%)
Query: 4 DVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINEL 63
DV N L G C + + + +A+++ M+ + PD T L + G + EL
Sbjct: 444 DVVTYNTILHGLC-KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 64 EVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVK 123
M E V Y+ L+ G+ K G++ D ++ W
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDI------------DTAKEIW------------ 538
Query: 124 EYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGI-VNACVSMGLSDKAHSILDEMNAL 182
A+++ ++++ P+ I Y I VNA S G +A + DEM +
Sbjct: 539 -----------ADMV--SKEILPT------PISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 183 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSA 242
+ + ++K YC+ ++ + ++ S G D +Y+ LI + ++ A
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA 639
Query: 243 FSLFRDMREAR---VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 299
F L + M E + VPD+ +NS
Sbjct: 640 FGLVKKMEEEQGGLVPDV-------------------------------------FTYNS 662
Query: 300 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAE 343
I+H FC+ ++++A R+M P+ TY +ING+VS +
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQD 706
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 118/311 (37%), Gaps = 44/311 (14%)
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 176
T +V + G ++ + +++ Q+ + D +++A S GL ++A ++
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQE---KGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 177 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 236
+ M G S G+ Y ++ CK + A + E+ SGL D TY +L+ +
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 237 QDFQSAFSLFRDMREAR-VPDLK--GSYLTIMT-------GLMENHRPELMAAFLDEVVG 286
D +F DMR VPDL S +++ T LM + + D V+
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 287 DPRIE------------------------VGTHDWNSIIHAFCKAGRLEDARRTFRRMNF 322
I+ + +N+I+H CK L +A + F M
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 323 LQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMV 382
P+ T LI+G+ N + L+ +K K I+ D + L
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK-------EKRIRLDVVTYNTLLDGFG 526
Query: 383 KGGFFDAAMQV 393
K G D A ++
Sbjct: 527 KVGDIDTAKEI 537
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 98/238 (41%), Gaps = 12/238 (5%)
Query: 158 GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYI--PILKAYCKENRTAEATILVMEIS 215
++ + V +G + A + E++ G VG+ VY ++ A CK+ + + + ++
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEISRSG--VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ 262
Query: 216 SSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPE 275
G+ D+ TY+ LI S + AF L M +Y T++ GL ++ + E
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 276 LMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSL 335
E++ + + + S++ CK G + + + F M P+ + S+
Sbjct: 323 RAKEVFAEMLRSG-LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 336 INGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQV 393
++ + + LM +N VK G+ D+ + + + G AM +
Sbjct: 382 MSLFTRSGNLDKALMYFNSVK-------EAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 173/400 (43%), Gaps = 32/400 (8%)
Query: 41 ELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTI- 99
+L+ F+ ++ ++EK + + F S K+ Y++ + YV ++ ++ +
Sbjct: 113 KLSPNFVSFVLKSDEIREKPD---IAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVD 169
Query: 100 -LRSLSDEDRK-DWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY 157
+R +S E +K ++ A++K + G + + L+ +K++ + I+
Sbjct: 170 RIRFVSSEIKKFEFPMTVSAANALIKSF---GKLGMVEELLWVWRKMKENGIEPTLYTYN 226
Query: 158 GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS 217
++N VS D A + + M + + Y ++K YCK +T +A + ++ +
Sbjct: 227 FLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETR 286
Query: 218 GLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM-ENHRPEL 276
G + D TY +I+ + DF S +L+++M E + ++ ++ GL E E
Sbjct: 287 GHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEG 346
Query: 277 MAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
F + + + V + +I + K+G +EDA R RM F+P+ TY ++
Sbjct: 347 YTVFENMIRKGSKPNVAI--YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVV 404
Query: 337 NGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMV-----KGGFFDAAM 391
NG L + + + + D +FD +++ Y+ + K G D A
Sbjct: 405 NG------------LCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 392 QVVEKSHEMKIFVDKWRYK---QAFMETHKKLKVAKLRKR 428
++ E+ E D + Y AF + K + L KR
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKR 492
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 159/384 (41%), Gaps = 22/384 (5%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 61
K D AA NA C A+++ M + G P E F L ++A ++
Sbjct: 155 KHDFAAYNA-FAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVY 213
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSG----NLASMESTILRSLSDEDRKDWNFGGET 117
+ M +FG + Y+ ++ VK+G LA E L +E T
Sbjct: 214 YVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEE--------STT 265
Query: 118 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 177
F +VK + G I+ + ++ Q++ + K D ++ VS G D + + D
Sbjct: 266 FMILVKGLCKAGRIEEMLEIL---QRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWD 322
Query: 178 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 237
EM + Y ++ CK+ R L ME+ + +D E Y LIE ++
Sbjct: 323 EMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADG 382
Query: 238 DFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDW 297
+SA +L+ D+ ++ G Y ++ GL ++ + A L +V + +E
Sbjct: 383 KVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVD-KAYKLFQVAIEEELEPDFETL 441
Query: 298 NSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKR 357
+ I+ A+ RL D R+ L + +D YL+ + A++ N + L DV
Sbjct: 442 SPIMVAYVVMNRLSDFSNVLERIGELGYPVSD--YLTQFFKLLCADEEKNAMAL--DVFY 497
Query: 358 KLSSDGHKGIKFDHNLVDAFLYAM 381
L + GH + + L++A LY M
Sbjct: 498 ILKTKGHGSVSVYNILMEA-LYKM 520
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 152/372 (40%), Gaps = 60/372 (16%)
Query: 25 AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVL---MGEFGCSNKKVFYSN 81
AERV+ +S +G P+ +++ L Y G K N E + M G + Y
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGG---KCNNAEAIFRRMQSSGPEPSAITYQI 214
Query: 82 LISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA 141
++ +V+ E + +L DE + + + ++ Y + GN + +A
Sbjct: 215 ILKTFVEGDKFKEAEE-VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE-------KA 266
Query: 142 QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS-ILDEMNALGGSVGLGVYIPILKAYCK 200
+K+ S + N+ +S S K S I D+M + Y ++KAY +
Sbjct: 267 RKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGR 326
Query: 201 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKG 259
R EA + E+ +G++ + Y+ L++ S + A ++F+ MR R+ PDL
Sbjct: 327 ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL-W 385
Query: 260 SYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRR 319
SY T+++ A+ A +E A + F+R
Sbjct: 386 SYTTMLS------------------------------------AYVNASDMEGAEKFFKR 409
Query: 320 MNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLY 379
+ FEPN TY +LI GY A ++ ++ K +LS GIK + ++ +
Sbjct: 410 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE--KMRLS-----GIKANQTILTTIMD 462
Query: 380 AMVKGGFFDAAM 391
A + F +A+
Sbjct: 463 ASGRCKNFGSAL 474
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 131/323 (40%), Gaps = 53/323 (16%)
Query: 25 AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVL---MGEFGCSNKKVFYSN 81
AERV+ +S +G P+ +++ L Y G K N E + M G + Y
Sbjct: 165 AERVLSVLSKMGSTPNVISYTALMESYGRGG---KCNNAEAIFRRMQSSGPEPSAITYQI 221
Query: 82 LISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA 141
++ +V+ E + +L DE + + + ++ Y + GN + +A
Sbjct: 222 ILKTFVEGDKFKEAEE-VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE-------KA 273
Query: 142 QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS-ILDEMNALGGSVGLGVYIPILKAYCK 200
+K+ S + N+ +S S K S I D+M + Y ++KAY +
Sbjct: 274 RKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGR 333
Query: 201 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKG 259
R EA + E+ +G++ + Y+ L++ S + A ++F+ MR R+ PDL
Sbjct: 334 ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL-W 392
Query: 260 SYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRR 319
SY T+++ A+ A +E A + F+R
Sbjct: 393 SYTTMLS------------------------------------AYVNASDMEGAEKFFKR 416
Query: 320 MNFLQFEPNDQTYLSLINGYVSA 342
+ FEPN TY +LI GY A
Sbjct: 417 IKVDGFEPNIVTYGTLIKGYAKA 439
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 174/453 (38%), Gaps = 82/453 (18%)
Query: 32 MSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFY-------SNLIS 84
+ N G P LTF L Y + KG E N +EVL +NK V Y S +IS
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKG--EMDNAIEVLEM---MTNKNVNYPFDNFVCSAVIS 179
Query: 85 GYVKSG--------------------NLASMESTI--------LRSLSDEDRKDWNFGGE 116
G+ K G NL + + + + + D R+ + G E
Sbjct: 180 GFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFE 239
Query: 117 TFCAVVKEYLRKGNIKG--LANLINEAQKLEPSNIKADNSIGYGI-VNACVSMGLSDKAH 173
C ++ G KG L + + + +++ + D + Y I ++ G ++A
Sbjct: 240 FDCVFYSNWIH-GYFKGGALVDALMQDREMVEKGMNRD-VVSYSILIDGLSKEGNVEEAL 297
Query: 174 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 233
+L +M G L Y I++ CK + EA +L I S G+++D Y LI+
Sbjct: 298 GLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGI 357
Query: 234 MSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD------ 287
+ AFS+ DM + + +Y T++ GL R VVGD
Sbjct: 358 CRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYST 417
Query: 288 -----------------------PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQ 324
+I + N ++ AF G +A +R M +
Sbjct: 418 LLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMD 477
Query: 325 FEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKG 384
P+ TY ++I GY + L ++N++++ S + ++ ++D A+ K
Sbjct: 478 LTPDTATYATMIKGYCKTGQIEEALEMFNELRK---SSVSAAVCYNR-IID----ALCKK 529
Query: 385 GFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETH 417
G D A +V+ + E +++D + H
Sbjct: 530 GMLDTATEVLIELWEKGLYLDIHTSRTLLHSIH 562
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 8/176 (4%)
Query: 191 YIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR 250
Y I+ CKE +A L S G+ L+ TY++LI A LF +
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 251 EARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGTHDWNSIIHAFCKA 307
+ + +Y ++ L + LD +V P I + +NSI+ +CK
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIII----YNSIVDGYCKL 773
Query: 308 GRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK-LSSD 362
G+ EDA R R + P+ T S+I GY L ++ + K K +S+D
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 121/290 (41%), Gaps = 45/290 (15%)
Query: 50 LYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISG-YVKSGNLASMESTILRSLSDEDR 108
+Y +G+ + E+ LMG +G N V+ N I G VKSG ED
Sbjct: 172 VYLREGMIQDSLEIFRLMGLYG-FNPSVYTCNAILGSVVKSG---------------EDV 215
Query: 109 KDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGL 168
W+F +KE L++ +A NI ++N + G
Sbjct: 216 SVWSF--------LKEMLKRKICPDVATF----------NI---------LINVLCAEGS 248
Query: 169 SDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDA 228
+K+ ++ +M G + + Y +L YCK+ R A L+ + S G+ DV TY+
Sbjct: 249 FEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNM 308
Query: 229 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 288
LI S + L RDMR+ + + +Y T++ G + + + L+E++
Sbjct: 309 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 368
Query: 289 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 338
+ +N++I G ++A + F M P++ +Y L++G
Sbjct: 369 -LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 129/333 (38%), Gaps = 27/333 (8%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 76
C+ + +A ++ MS G+ PD +T+ L + G + E+ + G S
Sbjct: 454 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 513
Query: 77 VFYSNLISGYVKSGNLAS----MESTILRSLSDEDRKDWNFGGETFC-----AVVKEYLR 127
+ YS LI + G L E+ IL D +N + C A +E++R
Sbjct: 514 IIYSTLIYNCCRMGCLKEAIRIYEAMILEG-HTRDHFTFNVLVTSLCKAGKVAEAEEFMR 572
Query: 128 KGNIKGLANLINEAQKLEPSNIKADNSI-GYGIVNACVSMGLSDKAHSILDEMNALGGSV 186
G+ P+ + D I GYG + G KA S+ DEM +G
Sbjct: 573 CMTSDGIL----------PNTVSFDCLINGYG------NSGEGLKAFSVFDEMTKVGHHP 616
Query: 187 GLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF 246
Y +LK CK EA + + + +D Y+ L+ S + A SLF
Sbjct: 617 TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 676
Query: 247 RDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCK 306
+M + + +Y ++++GL + + F E + + + K
Sbjct: 677 GEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFK 736
Query: 307 AGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
AG+ + +M+ L P+ T ++I+GY
Sbjct: 737 AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 769
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 137/336 (40%), Gaps = 13/336 (3%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
P V CNA L E V+ + M + PD TF L + +G EK +
Sbjct: 196 PSVYTCNAILGSVVKSGEDVS-VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSY 254
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 122
L M + G + V Y+ ++ Y K G + + L K + T+ ++
Sbjct: 255 LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA----IELLDHMKSKGVDADVCTYNMLI 310
Query: 123 KEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
+ R I L+ + +K + P+ + + ++N + G A +L+EM
Sbjct: 311 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT-----LINGFSNEGKVLIASQLLNEML 365
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
+ G S + ++ + E EA + + + GL +Y L++ + +F
Sbjct: 366 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD 425
Query: 241 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSI 300
A + M+ V + +Y ++ GL +N + L+E+ D I+ ++++
Sbjct: 426 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG-IDPDIVTYSAL 484
Query: 301 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
I+ FCK GR + A+ R+ + PN Y +LI
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 4/223 (1%)
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 176
T+ V+ Y +KG K L++ ++ + AD +++ K + +L
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDH---MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 326
Query: 177 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 236
+M Y ++ + E + A+ L+ E+ S GL + T++ALI+ +S
Sbjct: 327 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 386
Query: 237 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 296
+F+ A +F M + + SY ++ GL +N +L F + + + VG
Sbjct: 387 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG-VCVGRIT 445
Query: 297 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
+ +I CK G L++A M+ +P+ TY +LING+
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 488
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 150/364 (41%), Gaps = 26/364 (7%)
Query: 79 YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLI 138
++ L++ + K GN++ + + + ++ +F ++ Y + GN+ L
Sbjct: 243 FNILMNKFCKEGNISDAQ----KVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL- 297
Query: 139 NEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAY 198
++E S + D ++NA D AH + DEM G ++ ++ +
Sbjct: 298 --KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 199 CKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDL 257
+ ++ S GLQ D+ Y+ L+ + D +A ++ M R PD
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD- 414
Query: 258 KGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTF 317
K +Y T++ G E E+ + IE+ +++++ CK GR+ DA R
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQN-GIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 318 RRMNFLQFEPNDQTYLSLINGYV---SAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLV 374
R M +P+D TY +++ + A+ F +L +++ SDGH +N++
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLL-------KEMQSDGHVPSVVTYNVL 526
Query: 375 DAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKLKVAKLRKRNTKKME 434
L + K G A +++ + + D Y +E H + A KR +K E
Sbjct: 527 ---LNGLCKLGQMKNADMLLDAMLNIGVVPDDITY-NTLLEGHHRH--ANSSKRYIQKPE 580
Query: 435 AVIA 438
I
Sbjct: 581 IGIV 584
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/339 (18%), Positives = 138/339 (40%), Gaps = 44/339 (12%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++P V + N + G C ++ ++ + R+ M RPD T+ L + +
Sbjct: 271 LQPTVVSFNTLINGYC-KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
+ L M + G V ++ LI G+ ++G + M+ + + LS + D +
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVL----YNT 385
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
+V + + G++ N+++ + ++ D +++ G + A I EM+
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIR---RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G + + ++ CKE R +A + E+ +G++ D TY +++ D Q
Sbjct: 443 QNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQ 502
Query: 241 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSI 300
+ F L ++M+ + H P ++ +N +
Sbjct: 503 TGFKLLKEMQS------------------DGHVPSVVT------------------YNVL 526
Query: 301 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
++ CK G++++A M + P+D TY +L+ G+
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH 565
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 160/404 (39%), Gaps = 65/404 (16%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEKI 60
P++ N ++G C + + A R+VG + G +PD +T+ L Y GL K
Sbjct: 249 PNLFTYNLFIQGLC-QRGELDGAVRMVGCLIEQGPKPDVITYNNLIY-----GLCKNSKF 302
Query: 61 NELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET 117
E EV +G+ G Y+ LI+GY K G + E R + D + T
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE----RIVGDAVFNGFVPDQFT 358
Query: 118 FCAVVKEYLRKGNIKGLANLINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSI 175
+ +++ +G L NEA + ++P N+ N++ G+ N G+ +A +
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKP-NVILYNTLIKGLSNQ----GMILEAAQL 413
Query: 176 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 235
+EM+ G + + ++ CK ++A LV + S G D+ T++ LI +
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
Query: 236 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 295
++A E++ LD V DP + +
Sbjct: 474 QLKMENAL-------------------------------EILDVMLDNGV-DPDV----Y 497
Query: 296 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 355
+NS+++ CK + ED T++ M PN T+ L+ K L L ++
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 356 KRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHE 399
K K S + F L+D F K G D A + K E
Sbjct: 558 KNK--SVNPDAVTFG-TLIDGF----CKNGDLDGAYTLFRKMEE 594
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 148/355 (41%), Gaps = 27/355 (7%)
Query: 51 YAVKG-LQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLS---DE 106
Y KG +QE +N E M + C Y+ ++S V SG +R
Sbjct: 86 YGRKGKVQEAVNVFE-RMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITP 144
Query: 107 DRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACVS 165
D + ++FC + + ++ L N+ ++ ++ N + Y +V
Sbjct: 145 DVYSFTIRMKSFCKTSRPH---AALRLLNNMSSQGCEM--------NVVAYCTVVGGFYE 193
Query: 166 MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVET 225
+ + + +M A G S+ L + +L+ CK+ E L+ ++ G+ ++ T
Sbjct: 194 ENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFT 253
Query: 226 YDALIETSMSSQDFQSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV 284
Y+ I+ + A + + E PD+ +Y ++ GL +N + + +L ++
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI-TYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 285 VGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 344
V + +E ++ +N++I +CK G ++ A R F F P+ TY SLI+G +
Sbjct: 313 VNE-GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 345 HFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHE 399
L L+N+ KGIK + L + + + G A Q+ + E
Sbjct: 372 TNRALALFNEAL-------GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 154/368 (41%), Gaps = 61/368 (16%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
P V + N + G C + S+ +A + M+ GV PD +T+ L + + G+ E
Sbjct: 255 PSVYSHNILINGLCL-VGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWE 313
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 122
+ M + G S + Y+ L+ G + GN+ M +L+ D + + C+V+
Sbjct: 314 VIRDMLDKGLSPDVITYTILLCGQCQLGNI-DMGLVLLK---DMLSRGFELNSIIPCSVM 369
Query: 123 KEYLRK-GNIKGLANLINE--AQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDE 178
L K G I +L N+ A L P + + Y IV + +G D A + DE
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSP------DLVAYSIVIHGLCKLGKFDMALWLYDE 423
Query: 179 M---NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 235
M L S G +L C++ EA L+ + SSG LD+ Y+ +I+
Sbjct: 424 MCDKRILPNSRTHGA---LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 236 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 295
S + A LF+ + I TG+ + +A F
Sbjct: 481 SGCIEEALELFK--------------VVIETGITPS-----VATF--------------- 506
Query: 296 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 355
NS+I+ +CK + +AR+ + P+ +Y +L++ Y + ++ +++
Sbjct: 507 --NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI----DEL 560
Query: 356 KRKLSSDG 363
+R++ ++G
Sbjct: 561 RREMKAEG 568
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 154/368 (41%), Gaps = 61/368 (16%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
P V + N + G C + S+ +A + M+ GV PD +T+ L + + G+ E
Sbjct: 255 PSVYSHNILINGLCL-VGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWE 313
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 122
+ M + G S + Y+ L+ G + GN+ M +L+ D + + C+V+
Sbjct: 314 VIRDMLDKGLSPDVITYTILLCGQCQLGNI-DMGLVLLK---DMLSRGFELNSIIPCSVM 369
Query: 123 KEYLRK-GNIKGLANLINE--AQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDE 178
L K G I +L N+ A L P + + Y IV + +G D A + DE
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSP------DLVAYSIVIHGLCKLGKFDMALWLYDE 423
Query: 179 M---NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 235
M L S G +L C++ EA L+ + SSG LD+ Y+ +I+
Sbjct: 424 MCDKRILPNSRTHG---ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 236 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 295
S + A LF+ + I TG+ + +A F
Sbjct: 481 SGCIEEALELFK--------------VVIETGITPS-----VATF--------------- 506
Query: 296 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 355
NS+I+ +CK + +AR+ + P+ +Y +L++ Y + ++ +++
Sbjct: 507 --NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI----DEL 560
Query: 356 KRKLSSDG 363
+R++ ++G
Sbjct: 561 RREMKAEG 568
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 148/363 (40%), Gaps = 40/363 (11%)
Query: 9 NAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMG 68
+A+ C + +V +A R + L + P TF L + A E + L+
Sbjct: 439 HASFFKACKKQRAVKEAFR----FTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQ 494
Query: 69 EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE----TFCAVVKE 124
E G + Y+ LIS KSG + +M + +S N G E TF A++
Sbjct: 495 ESGMTADCKLYTTLISSCAKSGKVDAM-FEVFHQMS-------NSGVEANLHTFGALIDG 546
Query: 125 YLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGG 184
R G + A L N+K D + +++AC G D+A +L EM A
Sbjct: 547 CARAGQV---AKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETH 603
Query: 185 SVGLGVYIPI---LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 241
+ +I I +KA C + A + I G++ E Y + + S D+
Sbjct: 604 PIDPD-HISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDF 662
Query: 242 AFSLFRDMREARV-PD-LKGSYLTIMTGLMENHRPELMAAFLDEVVG---DPR---IEVG 293
A S+++DM+E V PD + S L + G A LDE G D + I +G
Sbjct: 663 ACSIYKDMKEKDVTPDEVFFSALIDVAG---------HAKMLDEAFGILQDAKSQGIRLG 713
Query: 294 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWN 353
T ++S++ A C A + A + ++ ++ P T +LI + + +
Sbjct: 714 TISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLD 773
Query: 354 DVK 356
++K
Sbjct: 774 EIK 776
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 131/315 (41%), Gaps = 17/315 (5%)
Query: 36 GVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFG---CSNKKVFYSNLISGYVKSGNL 92
G+ PD + FL L + G ++ EL + E G C+ V Y+ +I +S
Sbjct: 333 GLTPDVV---FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389
Query: 93 ASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA-QKLEPSNIKA 151
S S+ + + F T+ ++ Y + ++ L+ E +K P A
Sbjct: 390 VSEVSSWFDKMKADSVSPSEF---TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA 446
Query: 152 DNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILV 211
S+ +NA + A+ + E+ G+V VY ++K + K + +EA L
Sbjct: 447 YCSL----INALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLF 502
Query: 212 MEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMEN 271
E+ + G DV Y+AL+ + + A SL R M E S+ I+ G
Sbjct: 503 NEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFART 562
Query: 272 HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 331
P A + E + I+ +N+++ F AG E+A R R M FE + T
Sbjct: 563 GVPR-RAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAIT 621
Query: 332 YLSLIN--GYVSAEK 344
Y S+++ G V EK
Sbjct: 622 YSSILDAVGNVDHEK 636
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 148/387 (38%), Gaps = 37/387 (9%)
Query: 25 AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLIS 84
A R+ M + ++P E + L +Y G EK +L M GCS Y+ LI
Sbjct: 252 AIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIK 311
Query: 85 GYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQ-- 142
G K+G + L D D F + K G ++ L N+ +E
Sbjct: 312 GLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK----VGRVEELTNVFSEMGMW 367
Query: 143 KLEPSNIKADNSIGYGIVNACVSMGLSDKAH-----SILDEMNALGGSVGLGVYIPILKA 197
+ P+ + N + KAH S D+M A S Y ++
Sbjct: 368 RCTPTVVS---------YNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDG 418
Query: 198 YCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDL 257
YCK NR +A +L+ E+ G Y +LI ++ +++A LF++++E
Sbjct: 419 YCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVS 478
Query: 258 KGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGTHDWNSIIHAFCKAGRLEDAR 314
Y ++ + + +E+ P + + +N+++ KAG + +A
Sbjct: 479 SRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDV----YAYNALMSGMVKAGMINEAN 534
Query: 315 RTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLV 374
R+M + ++ ++NG+ + ++ +K H GIK D
Sbjct: 535 SLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIK-------HSGIKPDGVTY 587
Query: 375 DAFLYAMVKGGFFDAAMQVVEKSHEMK 401
+ L G F+ A +++ EMK
Sbjct: 588 NTLLGCFAHAGMFEEAARMM---REMK 611
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 7/242 (2%)
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 176
T+ A++ Y + G L +E ++ + ++ I ++ +G +KA +
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDE---MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 177 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 236
+EM G S + Y ++K K R EA ++ GL DV + L+
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 237 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMEN--HRPELMAAFLDEVVGDPRIEVGT 294
+ ++F +M R SY T++ L E+ H E+ +++ D++ D +
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEV-SSWFDKMKADS-VSPSE 409
Query: 295 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 354
++ +I +CK R+E A M+ F P Y SLIN A+++ L+ +
Sbjct: 410 FTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE 469
Query: 355 VK 356
+K
Sbjct: 470 LK 471
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 9/194 (4%)
Query: 158 GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVM----- 212
+V+A + G A+ +L +M G G VY ++ + C + + +L +
Sbjct: 377 SLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAY 436
Query: 213 -EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLME 270
E+ ++G+ L+ + S+ ++ AFS+ R+M + +PD +Y ++ L
Sbjct: 437 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD-TSTYSKVLNYLCN 495
Query: 271 NHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQ 330
+ EL A L E + + + + ++ +FCKAG +E AR+ F M + PN
Sbjct: 496 ASKMEL-AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Query: 331 TYLSLINGYVSAEK 344
TY +LI+ Y+ A+K
Sbjct: 555 TYTALIHAYLKAKK 568
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 19/240 (7%)
Query: 122 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 181
V YL + LA L+ E K + AD +V++ GL ++A +EM
Sbjct: 489 VLNYLCNASKMELAFLLFEEMK--RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 182 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 241
+G + + Y ++ AY K + + A L + S G ++ TY ALI+ + +
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 242 AFSLFRDMREAR-VPDLKG---------------SYLTIMTGLMENHRPELMAAFLDEVV 285
A +F M ++ VPD+ +Y ++ G ++HR E LD +
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 286 GDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKH 345
+ E ++++I CK G+L++A+ M+ F TY SLI+ Y ++
Sbjct: 667 MEG-CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 160/403 (39%), Gaps = 44/403 (10%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
P+V + L GC + + + +RV+ M G P F L + Y G +
Sbjct: 335 PNVVTYSTLLCGCLNK-KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYK 393
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 122
L M + G V Y+ LI G++ + ++ L D K ++ E A V
Sbjct: 394 LLKKMVKCGHMPGYVVYNILI------GSICGDKDSLNCDLLDLAEKAYS---EMLAAGV 444
Query: 123 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG----------IVNACVSMGLSDKA 172
L K N+ + A K E + IG G ++N + + A
Sbjct: 445 --VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 173 HSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIET 232
+ +EM G + Y ++ ++CK +A E+ G +V TY ALI
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562
Query: 233 SMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---P 288
+ ++ A LF M E +P++ +Y ++ G + + E + + G P
Sbjct: 563 YLKAKKVSYANELFETMLSEGCLPNIV-TYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Query: 289 RIEV--GTHDWNS----------IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
+++ +D NS ++ FCK+ R+E+AR+ M+ EPN Y +LI
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 337 NGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDH-NLVDAFL 378
+G K L +VK ++S G + + +L+D +
Sbjct: 682 DGLCKVGK----LDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 140/388 (36%), Gaps = 78/388 (20%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 76
C+ + A + M +G P+ +T+ L + Y NEL M GC
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 77 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 136
V YS LI G+ K+G + R +D D V Y ++ +
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD-----------VDMYFKQYD------ 631
Query: 137 LINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPIL 195
N + N + YG +++ ++A +LD M+ G VY ++
Sbjct: 632 ----------DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 196 KAYCKENRTAEATILVMEISSSGLQLDVETYDALIET--SMSSQDFQSAFSLFRDMREAR 253
CK + EA + E+S G + TY +LI+ + QD S
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK----------- 730
Query: 254 VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 313
+++ ++EN P + + + +I CK G+ ++A
Sbjct: 731 ----------VLSKMLENS-------------CAPNVVI----YTEMIDGLCKVGKTDEA 763
Query: 314 RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNL 373
+ + M +PN TY ++I+G+ K L L L G KG+ ++
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL-------LERMGSKGVAPNYVT 816
Query: 374 VDAFLYAMVKGGFFDAAMQVVEKSHEMK 401
+ K G D A ++E EMK
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLE---EMK 841
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 144/389 (37%), Gaps = 83/389 (21%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTF----------------- 44
+P+V A L+G C + V +A +++ MS G P+++ +
Sbjct: 636 RPNVVTYGALLDGFC-KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 45 ---------GFLGYLYAVKGL---------QEKINELEVLMGEFGCSNKKVFYSNLISGY 86
GF LY L Q+ +++ M E C+ V Y+ +I G
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754
Query: 87 VKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEP 146
K G + E+ L + +E N T+ A++ + G I+ L+
Sbjct: 755 CKVGK--TDEAYKLMQMMEEKGCQPNV--VTYTAMIDGFGMIGKIETCLELLERMG---- 806
Query: 147 SNIKADNSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTA 205
S A N + Y + ++ C G D AH++L+EM Y +++ + KE
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF--- 863
Query: 206 EATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIM 265
I S GL ++ D + F S + L D
Sbjct: 864 --------IESLGLLDEIGQDD--------TAPFLSVYRLLID----------------- 890
Query: 266 TGLMENHRPELMAAFLDEVVGDPRIEVG-THDWNSIIHAFCKAGRLEDARRTFRRMNFLQ 324
L++ R E+ L+EV V + +NS+I + C A ++E A + F M
Sbjct: 891 -NLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKG 949
Query: 325 FEPNDQTYLSLINGYVSAEKHFNVLMLWN 353
P Q++ SLI G K L+L +
Sbjct: 950 VIPEMQSFCSLIKGLFRNSKISEALLLLD 978
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 147/361 (40%), Gaps = 32/361 (8%)
Query: 50 LYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDED-- 107
+Y+ G K EL M + GC + ++ LI+ +KSG L + L +
Sbjct: 234 VYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGL 293
Query: 108 RKDWNFGGETFCAVVKEYLRKGNIKGLANLIN--EAQKLEPSNIKADNSIGYGIVNACVS 165
R D T+ ++ R N+ G + EA + +P NA +S
Sbjct: 294 RPD----AITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPD---------LWTYNAMIS 340
Query: 166 M----GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQL 221
+ GL+ +A + E+ G Y +L A+ +E T + + ++ G
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 222 DVETYDALIETSMSSQDFQSAFSLFRDMR--EARVPDLKGSYLTIMTGLMENHRPELMAA 279
D TY+ +I A L++DM+ R PD +Y ++ L + +R AA
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD-AITYTVLIDSLGKANRTVEAAA 459
Query: 280 FLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
+ E++ D I+ ++++I + KAG+ E+A TF M +P++ Y +++
Sbjct: 460 LMSEML-DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVL 518
Query: 340 VSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHE 399
+ + L+ D + SDGH + L + + ++K D + + E
Sbjct: 519 LRGNETRKAWGLYRD----MISDGHTP---SYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Query: 400 M 400
+
Sbjct: 572 L 572
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 137/348 (39%), Gaps = 56/348 (16%)
Query: 15 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEK----INELEVLMGEF 70
CC E +A +V + G E + +Y G E +N+ E F
Sbjct: 690 CCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHF 749
Query: 71 GCSNKKVFYSNLISGYVKSGNLASMESTI--LR-SLSDEDRKDWNFGGETFCAVVKEYLR 127
CS Y+++I Y K ES + LR S D K WN +++ Y +
Sbjct: 750 ACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN-------SLMSAYAQ 799
Query: 128 KGNIKGLANLINEAQKLEPSNIKADNSIG-------------YGIVNACVSMGLSDKAHS 174
G + + N + PS +I Y +V MG S
Sbjct: 800 CGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSS 859
Query: 175 ILDEMNALG------------GSVGLGVYIPILKAY-------CKENRTAEATILVMEIS 215
IL ++A S+ Y+P ++ Y CK R +A I+V E+
Sbjct: 860 ILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEME 919
Query: 216 SSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPE 275
+ ++++ ++++++ + +D++ +++ ++E + + +Y T++ + RPE
Sbjct: 920 EANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPE 979
Query: 276 ---LMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRM 320
L+ + + DP+++ + S+I AF K LE A + F +
Sbjct: 980 EGYLLMQQMRNLGLDPKLDT----YKSLISAFGKQKCLEQAEQLFEEL 1023
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 154/385 (40%), Gaps = 36/385 (9%)
Query: 35 LGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS 94
L +R T+ L GL + ++ M G S L+S + + G L
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 95 MESTILRSLSDEDRKDWNFGGETFCAVVKEYL----RKGNIKGLANLINEAQKLEPSNIK 150
+ +L+S F E C VV L + ++ L +E + + N
Sbjct: 157 ATALLLQS----------FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-- 204
Query: 151 ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATIL 210
D ++ +G ++KA +L M+ G + Y +++ +CK N +A+ +
Sbjct: 205 -DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 211 VMEI-SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 269
++ S S DV TY ++I + + A SL DM + ++ ++ G
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 270 ENHRPELMAAFLDEVVGDPRIEVGTHD----WNSIIHAFCKAGRLEDARRTFRRMNFLQF 325
+ E++ A +E+ G I G + S+I +C+ G++ R + MN
Sbjct: 324 K--AGEMLTA--EEIRGK-MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 326 EPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN-LVDAFLYAMVKG 384
PN TY LIN + N L+ ++ +L+S F +N ++D F K
Sbjct: 379 FPNAFTYSILINALCNE----NRLLKARELLGQLASKDIIPQPFMYNPVIDGF----CKA 430
Query: 385 GFFDAAMQVVEKSHEMKIFVDKWRY 409
G + A +VE+ + K DK +
Sbjct: 431 GKVNEANVIVEEMEKKKCKPDKITF 455
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 102/253 (40%), Gaps = 10/253 (3%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINEL--EVLMGEFGCSN 74
C + A ++G MS G PD +T+ L + K +E+ +V G CS
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV-CSP 275
Query: 75 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 134
V Y+++ISGY K+G + S L D R TF +V Y + G +
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSL----LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 135 ANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 194
+ K+ D +++ +G + + +EMNA G Y +
Sbjct: 332 EEI---RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 195 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 254
+ A C ENR +A L+ +++S + Y+ +I+ + A + +M + +
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 255 PDLKGSYLTIMTG 267
K ++ ++ G
Sbjct: 449 KPDKITFTILIIG 461
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 13/251 (5%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 61
+PD+ N ++G C E +E S PD +T+ + Y G + +
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
L M G V ++ L+ GY K+G + + E + +S D TF ++
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDV----VTFTSL 353
Query: 122 VKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGI-VNACVSMGLSDKAHSILDE 178
+ Y R G + L E A+ + P N+ Y I +NA + KA +L +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFP------NAFTYSILINALCNENRLLKARELLGQ 407
Query: 179 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 238
+ + +Y P++ +CK + EA ++V E+ + D T+ LI
Sbjct: 408 LASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGR 467
Query: 239 FQSAFSLFRDM 249
A S+F M
Sbjct: 468 MFEAVSIFHKM 478
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 154/385 (40%), Gaps = 36/385 (9%)
Query: 35 LGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS 94
L +R T+ L GL + ++ M G S L+S + + G L
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 95 MESTILRSLSDEDRKDWNFGGETFCAVVKEYL----RKGNIKGLANLINEAQKLEPSNIK 150
+ +L+S F E C VV L + ++ L +E + + N
Sbjct: 157 ATALLLQS----------FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-- 204
Query: 151 ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATIL 210
D ++ +G ++KA +L M+ G + Y +++ +CK N +A+ +
Sbjct: 205 -DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 211 VMEI-SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 269
++ S S DV TY ++I + + A SL DM + ++ ++ G
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 270 ENHRPELMAAFLDEVVGDPRIEVGTHD----WNSIIHAFCKAGRLEDARRTFRRMNFLQF 325
+ E++ A +E+ G I G + S+I +C+ G++ R + MN
Sbjct: 324 K--AGEMLTA--EEIRGK-MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 326 EPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN-LVDAFLYAMVKG 384
PN TY LIN + N L+ ++ +L+S F +N ++D F K
Sbjct: 379 FPNAFTYSILINALCNE----NRLLKARELLGQLASKDIIPQPFMYNPVIDGF----CKA 430
Query: 385 GFFDAAMQVVEKSHEMKIFVDKWRY 409
G + A +VE+ + K DK +
Sbjct: 431 GKVNEANVIVEEMEKKKCKPDKITF 455
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 102/253 (40%), Gaps = 10/253 (3%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINEL--EVLMGEFGCSN 74
C + A ++G MS G PD +T+ L + K +E+ +V G CS
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV-CSP 275
Query: 75 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 134
V Y+++ISGY K+G + S L D R TF +V Y + G +
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSL----LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 135 ANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 194
+ K+ D +++ +G + + +EMNA G Y +
Sbjct: 332 EEI---RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 195 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 254
+ A C ENR +A L+ +++S + Y+ +I+ + A + +M + +
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 255 PDLKGSYLTIMTG 267
K ++ ++ G
Sbjct: 449 KPDKITFTILIIG 461
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 13/251 (5%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 61
+PD+ N ++G C E +E S PD +T+ + Y G + +
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 121
L M G V ++ L+ GY K+G + + E + +S D TF ++
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDV----VTFTSL 353
Query: 122 VKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGI-VNACVSMGLSDKAHSILDE 178
+ Y R G + L E A+ + P N+ Y I +NA + KA +L +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFP------NAFTYSILINALCNENRLLKARELLGQ 407
Query: 179 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 238
+ + +Y P++ +CK + EA ++V E+ + D T+ LI
Sbjct: 408 LASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGR 467
Query: 239 FQSAFSLFRDM 249
A S+F M
Sbjct: 468 MFEAVSIFHKM 478
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 125/315 (39%), Gaps = 53/315 (16%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY-LYAVKGLQEKI 60
KPD N + GC + DA ++ M V+P +TFG L + L ++E +
Sbjct: 149 KPDACTYNILIHGCS-QSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEAL 207
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
++ +G Y++LI + G L +F
Sbjct: 208 KMKHDMLKVYGVRPTVHIYASLIKALCQIGEL------------------------SFAF 243
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
+K+ +G IK D +I ++++ + G S++ IL+EM+
Sbjct: 244 KLKDEAYEGKIK------------------VDAAIYSTLISSLIKAGRSNEVSMILEEMS 285
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G Y ++ +C EN + A ++ E+ GL+ DV +Y+ ++ + ++
Sbjct: 286 EKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWE 345
Query: 241 SAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV---GDPRIEVGTHD 296
A LF DM R PD SY + GL E + E A LDE++ PR
Sbjct: 346 EATYLFEDMPRRGCSPDTL-SYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPR----RDR 400
Query: 297 WNSIIHAFCKAGRLE 311
+ C++G+LE
Sbjct: 401 LEGFLQKLCESGKLE 415
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEM 179
+VK +K +I+ +++E PS N + Y I+ V+ G + A +L+EM
Sbjct: 197 LVKALCKKNDIESAYKVLDEI----PSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM 252
Query: 180 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 239
G Y ++ YCK R +EA ++ ++ + ++ + TY +I +
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 240 QSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD-- 296
A ++F +M E + +PD ++ L E+H+ +DE G R + +
Sbjct: 313 GEARNMFDEMLERSFMPD-SSLCCKVIDALCEDHK-------VDEACGLWRKMLKNNCMP 364
Query: 297 ----WNSIIHAFCKAGRLEDARRTFRRMNFLQFE----PNDQTYLSLINGYVSAEKHFNV 348
+++IH CK GR+ +AR+ F +FE P+ TY +LI G +
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFD-----EFEKGSIPSLLTYNTLIAGMCEKGELTEA 419
Query: 349 LMLWNDV-KRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDK 406
LW+D+ +RK + F +N++ + + K G ++V+E+ E+ F +K
Sbjct: 420 GRLWDDMYERKCKPNA-----FTYNVL---IEGLSKNGNVKEGVRVLEEMLEIGCFPNK 470
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 129/314 (41%), Gaps = 27/314 (8%)
Query: 34 NLGVRPDELTFGFLGYLYAVKGLQEKINELE----VL--MGEFGCSNKKVFYSNLISGYV 87
+ G+ P+ T L VK L +K N++E VL + G V Y+ ++ GYV
Sbjct: 184 SFGITPNIFTCNLL-----VKALCKK-NDIESAYKVLDEIPSMGLVPNLVTYTTILGGYV 237
Query: 88 KSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQK--LE 145
G++ S + R L + + W T+ ++ Y + G A ++++ +K +E
Sbjct: 238 ARGDMESAK----RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIE 293
Query: 146 PSNIKADNSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRT 204
P N + YG+ + A S +A ++ DEM + ++ A C++++
Sbjct: 294 P------NEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKV 347
Query: 205 AEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTI 264
EA L ++ + D LI A LF + + +P L +Y T+
Sbjct: 348 DEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLL-TYNTL 406
Query: 265 MTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQ 324
+ G+ E D++ + + + +N +I K G +++ R M +
Sbjct: 407 IAGMCEKGELTEAGRLWDDMY-ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG 465
Query: 325 FEPNDQTYLSLING 338
PN T+L L G
Sbjct: 466 CFPNKTTFLILFEG 479
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 138/338 (40%), Gaps = 35/338 (10%)
Query: 50 LYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRK 109
+Y GL E+ E+ + EFGC Y++++ + N M + R D R
Sbjct: 120 VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGE-NRIQMIYMVYR---DMKRD 175
Query: 110 DWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKA-DNSIGYG-IVNACVSMG 167
+ T+ ++K + + G L+ +E SN +++ Y ++++ +G
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLL-----VEMSNKGCCPDAVSYTTVISSMCEVG 230
Query: 168 LSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYD 227
L + + + + + VY ++ CKE+ A L+ E+ G+ +V +Y
Sbjct: 231 LVKEGRELAERFEPV-----VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 228 ALIETSMSSQDFQSAFSLFRDM-REARVPDL-------KGSYLTIMTGLMENHRPELMAA 279
LI +S + AFS M + P++ KG +L T + +++
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 280 FLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
F ++ +N+++ FC G + A F M + PN +TY SLING+
Sbjct: 346 F--------GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Query: 340 VSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAF 377
+ +WN + L+S + N+V+A
Sbjct: 398 AKRGSLDGAVYIWN---KMLTSGCCPNVVVYTNMVEAL 432
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 153/370 (41%), Gaps = 22/370 (5%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 61
+P V+ NA + G C E A ++ M G+ P+ +++ L + G E
Sbjct: 243 EPVVSVYNALINGLCKE-HDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAF 301
Query: 62 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE----T 117
M + GC S+L+ G G T +L ++ FG +
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRG-------TTFDALDLWNQMIRGFGLQPNVVA 354
Query: 118 FCAVVKEYLRKGNIKGLANLINEAQKLEPS-NIKADNSIGYGIVNACVSMGLSDKAHSIL 176
+ +V+ + GNI ++ + +++ S NI+ S+ +N G D A I
Sbjct: 355 YNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL----INGFAKRGSLDGAVYIW 410
Query: 177 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 236
++M G + VY +++A C+ ++ EA L+ +S V T++A I+ +
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470
Query: 237 QDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 295
A +FR M ++ R P +Y ++ GL + +R E E+ +E +
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR-GVEWSSS 529
Query: 296 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV---SAEKHFNVLMLW 352
+N+++H C AG A + +M P++ T +I Y AE+ +L L
Sbjct: 530 TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLV 589
Query: 353 NDVKRKLSSD 362
+ +RK D
Sbjct: 590 SCGRRKWRPD 599
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 102/248 (41%), Gaps = 43/248 (17%)
Query: 147 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 206
S+IKAD I IV+ G A ++ EM+ G + Y ++ ++C R ++
Sbjct: 4 SHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSD 63
Query: 207 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 266
A L+ + + D+ T+ ALI + + A ++++M + + T +T
Sbjct: 64 ADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSI------FPTTIT 117
Query: 267 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFE 326
+NS+I FCK R++DA+R M
Sbjct: 118 ------------------------------YNSMIDGFCKQDRVDDAKRMLDSMASKGCS 147
Query: 327 PNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGF 386
P+ T+ +LINGY A++ N + ++ ++ R +GI + ++ + G
Sbjct: 148 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHR-------RGIVANTVTYTTLIHGFCQVGD 200
Query: 387 FDAAMQVV 394
DAA ++
Sbjct: 201 LDAAQDLL 208
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 106/249 (42%), Gaps = 14/249 (5%)
Query: 167 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 226
G DK +L +M LG Y ++ +C++ + A L + SGLQ +V T+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 227 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 286
+ LI + Q A +F +M+ V +Y T++ G + E+ F +++V
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 287 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV---SAE 343
+ I+ +N++I CK + A + + ++ PN T+ +LI G +A+
Sbjct: 372 NG-IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNAD 430
Query: 344 KHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIF 403
+ F + K + S H + + LV AF + FD A QV+ + I
Sbjct: 431 RGFEL------YKSMIRSGCHPNEQTFNMLVSAF----CRNEDFDGASQVLREMVRRSIP 480
Query: 404 VDKWRYKQA 412
+D Q
Sbjct: 481 LDSRTVHQV 489
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 97/243 (39%), Gaps = 45/243 (18%)
Query: 190 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 249
V+ + K + + AT M++ G VE+ +A + + + A +R+M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 250 REARV-PDL-----------------KG-----------------SYLTIMTGLMENHRP 274
R ++ P+ KG SY T++ G E +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE--KG 287
Query: 275 ELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYL 333
L +A L ++G ++ +N++IH FC+A +L++A + F M + PN TY
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 334 SLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQV 393
+LINGY H + D+ GI+ D +A ++ + K A Q
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMV-------CNGIQRDILTYNALIFGLCKQAKTRKAAQF 400
Query: 394 VEK 396
V++
Sbjct: 401 VKE 403
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 10/248 (4%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
P V +CNA + + V A R M + P+ T + Y G +K E
Sbjct: 201 PTVESCNAYMSSLLGQ-GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE 259
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 122
L M G V Y+ LI+G+ + G L+S + L+++ + N TF ++
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSS--ALKLKNMMGKSGLQPNV--VTFNTLI 315
Query: 123 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNA 181
+ R ++ + + E ++ N+ A N++ Y ++N G + A ++M
Sbjct: 316 HGFCRAMKLQEASKVFGE---MKAVNV-APNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 182 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 241
G + Y ++ CK+ +T +A V E+ L + T+ ALI ++
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431
Query: 242 AFSLFRDM 249
F L++ M
Sbjct: 432 GFELYKSM 439
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 106/249 (42%), Gaps = 14/249 (5%)
Query: 167 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 226
G DK +L +M LG Y ++ +C++ + A L + SGLQ +V T+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 227 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 286
+ LI + Q A +F +M+ V +Y T++ G + E+ F +++V
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 287 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV---SAE 343
+ I+ +N++I CK + A + + ++ PN T+ +LI G +A+
Sbjct: 372 NG-IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNAD 430
Query: 344 KHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIF 403
+ F + K + S H + + LV AF + FD A QV+ + I
Sbjct: 431 RGFEL------YKSMIRSGCHPNEQTFNMLVSAF----CRNEDFDGASQVLREMVRRSIP 480
Query: 404 VDKWRYKQA 412
+D Q
Sbjct: 481 LDSRTVHQV 489
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 97/243 (39%), Gaps = 45/243 (18%)
Query: 190 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 249
V+ + K + + AT M++ G VE+ +A + + + A +R+M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 250 REARV-PDL-----------------KG-----------------SYLTIMTGLMENHRP 274
R ++ P+ KG SY T++ G E +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE--KG 287
Query: 275 ELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYL 333
L +A L ++G ++ +N++IH FC+A +L++A + F M + PN TY
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 334 SLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQV 393
+LINGY H + D+ GI+ D +A ++ + K A Q
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMV-------CNGIQRDILTYNALIFGLCKQAKTRKAAQF 400
Query: 394 VEK 396
V++
Sbjct: 401 VKE 403
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 10/248 (4%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
P V +CNA + + V A R M + P+ T + Y G +K E
Sbjct: 201 PTVESCNAYMSSLLGQ-GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE 259
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 122
L M G V Y+ LI+G+ + G L+S + L+++ + N TF ++
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSS--ALKLKNMMGKSGLQPNV--VTFNTLI 315
Query: 123 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNA 181
+ R ++ + + E ++ N+ A N++ Y ++N G + A ++M
Sbjct: 316 HGFCRAMKLQEASKVFGE---MKAVNV-APNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 182 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 241
G + Y ++ CK+ +T +A V E+ L + T+ ALI ++
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431
Query: 242 AFSLFRDM 249
F L++ M
Sbjct: 432 GFELYKSM 439
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 135/342 (39%), Gaps = 49/342 (14%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
++P++ NA ++ C + M GV+PD +TF L + + GL E
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
L M Y+ L+ K G + D F
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM-----------------DLAF------- 394
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEM 179
E L + +K ++ P N + Y +++ G D+A ++ EM
Sbjct: 395 ---EILAQMPVK----------RIMP------NVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Query: 180 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 239
LG ++ Y +L Y K R+ EA ++ E++S G++ DV TY+AL+ +
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495
Query: 240 QSAFSLFRDM-REARVPDLKGSYLTIMTGLMENH-RPELMAAFLDEVVGDPRIEVGTHDW 297
+F +M RE +P+L +Y T++ G + E M F + R +V +
Sbjct: 496 DEVKKVFTEMKREHVLPNLL-TYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVL--Y 552
Query: 298 NSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
+++I A CK G + A M PN TY S+I+ +
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 100/233 (42%), Gaps = 11/233 (4%)
Query: 180 NALGGSVGLGVYI--PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIET-SMSS 236
A G G VY ++ AY + EA + + GL+ ++ TY+A+I+
Sbjct: 258 TAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGG 317
Query: 237 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 296
+F+ F +M+ V + ++ +++ E DE+ + RIE
Sbjct: 318 MEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT-NRRIEQDVFS 376
Query: 297 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 356
+N+++ A CK G+++ A +M + PN +Y ++I+G+ A + L L+ +++
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 357 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
+ GI D + L K G + A+ ++ + + I D Y
Sbjct: 437 -------YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY 482
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 129/310 (41%), Gaps = 22/310 (7%)
Query: 117 TFCAVVKEYLRKGNIKGLANLINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS 174
T+ ++ + R N+ A + N+ Q L+P +I A N + G++ S SD A
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKP-DIVAHNVMLEGLLR---SRKKSD-AIK 354
Query: 175 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 234
+ M + G + Y +++ +CK++ A ++ SGLQ D Y LI
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 235 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 294
+ + + + L ++M+E P +Y ++ + PE ++++ + IE
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN-EIEPSI 473
Query: 295 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 354
H +N I+ ++ A E R + M P+D +Y LI G + K +
Sbjct: 474 HTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEE 533
Query: 355 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEM---KIFVDKW---- 407
+ K G K D+N A + + F+ Q + S + +IF +W
Sbjct: 534 MLDK----GMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFA-RWAQMT 588
Query: 408 --RYKQAFME 415
R+KQ FME
Sbjct: 589 RRRFKQRFME 598
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 1/178 (0%)
Query: 159 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 218
++N G ++A ILD M G + + Y ++ +CK + EA E+ +G
Sbjct: 274 MINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTG 333
Query: 219 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 278
L+LD Y L+ + + A L +M+ +R +Y I+ GL R E
Sbjct: 334 LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEAL 393
Query: 279 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
LD+ G + + + I++A C G LE A + M+ P+ T+ L+
Sbjct: 394 QMLDQ-WGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 130/299 (43%), Gaps = 16/299 (5%)
Query: 17 CELESVTDAERVVGTMSNLGVR-PDELTFG-FLGYLYAVKGLQEKINELEVLMGEFGCSN 74
C+ + A VV M G+ P+ +T+ + L+A +E + E ++ + G S
Sbjct: 207 CKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISP 266
Query: 75 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 134
V ++ +I+G+ ++G + + + L + N + A++ + + G I+
Sbjct: 267 DPVTFNVMINGFCRAGEVERAK----KILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEA 322
Query: 135 ANLINEAQKLEPSNIKADNSIGYGIVNACVSM-GLSDKAHSILDEMNALGGSVGLGVYIP 193
+E +K + +K D ++GY + C G +D+A +L EM A Y
Sbjct: 323 KQTFDEVKK---TGLKLD-TVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNV 378
Query: 194 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 253
IL+ E R+ EA ++ + S G+ L+ +Y ++ + + + A M E
Sbjct: 379 ILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERG 438
Query: 254 VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEV--GTHDWNSIIHAFCKAGRL 310
+ ++ ++ L E+ E+ L +G RI + G W +++ + CK +L
Sbjct: 439 IWPHHATWNELVVRLCESGYTEIGVRVL---IGFLRIGLIPGPKSWGAVVESICKERKL 494
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 10/194 (5%)
Query: 218 GLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV--PDLKGSYLTIMTGLMENHRPE 275
GLQ + ++ L++ + D AF + +M+ + + P+ +Y T+M L + R +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPN-SITYSTLMDCLFAHSRSK 249
Query: 276 LMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSL 335
++++ I +N +I+ FC+AG +E A++ M PN Y +L
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 336 INGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 395
+NG+ K +++VK+ G+K D + + G D AM+++
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKK-------TGLKLDTVGYTTLMNCFCRNGETDEAMKLLG 362
Query: 396 KSHEMKIFVDKWRY 409
+ + D Y
Sbjct: 363 EMKASRCRADTLTY 376
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 5/186 (2%)
Query: 159 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 218
++ AC G A S+ M G + + Y ++ Y K ++ + L+ E+ S+G
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 219 LQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELM 277
+ DV TY+ LI + + A + ++ R VP ++ ++ G + R +
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS-TLAFTDVIGGF--SKRGDFQ 565
Query: 278 AAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
AF L + D R++ ++++H +CKA R+E A F ++ +P+ Y +LI
Sbjct: 566 EAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Query: 337 NGYVSA 342
+GY S
Sbjct: 626 HGYCSV 631
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 152/379 (40%), Gaps = 50/379 (13%)
Query: 32 MSNLGVRPDELTFG-FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSG 90
M + G+RPD + F F+ L L+E + L L FG S V S++I G+ K G
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKL-KLFGISQDSVSVSSVIDGFCKVG 355
Query: 91 NLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNI----KGLANLINEAQKLEP 146
E ++ + + NI L+N+ + L
Sbjct: 356 K-----------------------PEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 147 SNIKADNSIGYGIVNACV----------SMGLSDKAHSILDEMNALGGSVGLGVYIPILK 196
S I + G++ CV ++G +DKA + G L ++
Sbjct: 393 STIFQE-IFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 197 AYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-P 255
A + ++A + + + GL+LDV TY+ L+ + F L +MR A + P
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 256 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 315
D+ + I + ++ + E + E++ + T + +I F K G ++A
Sbjct: 512 DVATYNILIHSMVVRGYIDE-ANEIISELIRRGFVP-STLAFTDVIGGFSKRGDFQEAFI 569
Query: 316 TFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVD 375
+ M L+ +P+ T +L++GY A++ ++L+N + G+K D L +
Sbjct: 570 LWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLL-------DAGLKPDVVLYN 622
Query: 376 AFLYAMVKGGFFDAAMQVV 394
++ G + A +++
Sbjct: 623 TLIHGYCSVGDIEKACELI 641
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 5/186 (2%)
Query: 159 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 218
++ AC G A S+ M G + + Y ++ Y K ++ + L+ E+ S+G
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 219 LQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELM 277
+ DV TY+ LI + + A + ++ R VP ++ ++ G + R +
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS-TLAFTDVIGGF--SKRGDFQ 565
Query: 278 AAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
AF L + D R++ ++++H +CKA R+E A F ++ +P+ Y +LI
Sbjct: 566 EAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Query: 337 NGYVSA 342
+GY S
Sbjct: 626 HGYCSV 631
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 152/379 (40%), Gaps = 50/379 (13%)
Query: 32 MSNLGVRPDELTFG-FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSG 90
M + G+RPD + F F+ L L+E + L L FG S V S++I G+ K G
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKL-KLFGISQDSVSVSSVIDGFCKVG 355
Query: 91 NLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNI----KGLANLINEAQKLEP 146
E ++ + + NI L+N+ + L
Sbjct: 356 K-----------------------PEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 147 SNIKADNSIGYGIVNACV----------SMGLSDKAHSILDEMNALGGSVGLGVYIPILK 196
S I + G++ CV ++G +DKA + G L ++
Sbjct: 393 STIFQE-IFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 197 AYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-P 255
A + ++A + + + GL+LDV TY+ L+ + F L +MR A + P
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 256 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 315
D+ + I + ++ + E + E++ + T + +I F K G ++A
Sbjct: 512 DVATYNILIHSMVVRGYIDE-ANEIISELIRRGFVP-STLAFTDVIGGFSKRGDFQEAFI 569
Query: 316 TFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVD 375
+ M L+ +P+ T +L++GY A++ ++L+N + G+K D L +
Sbjct: 570 LWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLL-------DAGLKPDVVLYN 622
Query: 376 AFLYAMVKGGFFDAAMQVV 394
++ G + A +++
Sbjct: 623 TLIHGYCSVGDIEKACELI 641
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 142/350 (40%), Gaps = 56/350 (16%)
Query: 1 MKPDVAACNAALEGCCCELESV-TDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEK 59
+ PD N + CC+ S+ +A +V M G D++T+ L +Y G +
Sbjct: 275 IAPDAYTYNTLI--TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY---GKSHR 329
Query: 60 INELEVLMGEF---GCSNKKVFYSNLISGYVKSGNL-ASMESTILRSLSDEDRKDWNFGG 115
E ++ E G S V Y++LIS Y + G L +ME + ++++ K F
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME--LKNQMAEKGTKPDVF-- 385
Query: 116 ETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSI 175
T+ ++ + R G ++ ++ E + + K + + + G + I
Sbjct: 386 -TYTTLLSGFERAGKVESAMSIFEEMRN---AGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 176 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 235
DE+N G S + + +L + + +E + + E+ +G + ET++ LI
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
Query: 236 SQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 294
F+ A +++R M +A V PDL
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPDLS------------------------------------ 525
Query: 295 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 344
+N+++ A + G E + + M + +PN+ TY SL++ Y + ++
Sbjct: 526 -TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 133/325 (40%), Gaps = 26/325 (8%)
Query: 24 DAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLI 83
+A +V+ M G P +T+ L YA G+ ++ EL+ M E G Y+ L+
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 84 SGYVKSGNLASMESTILRSLSDEDRKDWNFGGE----TFCAVVKEYLRKGNIKGLANLIN 139
SG+ ++G + S S+ +E R N G + TF A +K Y +G + + +
Sbjct: 392 SGFERAGKVESA-----MSIFEEMR---NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 140 EAQ--KLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKA 197
E L P + + + N G+ + + EM G + ++ A
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQN-----GMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 198 YCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDL 257
Y + +A + + +G+ D+ TY+ ++ ++ + + +M + R
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 258 KGSYLTIMTGLMENHRPELMAAFLDEV---VGDPRIEVGTHDWNSIIHAFCKAGRLEDAR 314
+ +Y +++ LM + +EV V +PR + +++ K L +A
Sbjct: 559 ELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL----LKTLVLVCSKCDLLPEAE 614
Query: 315 RTFRRMNFLQFEPNDQTYLSLINGY 339
R F + F P+ T S+++ Y
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIY 639
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 114/290 (39%), Gaps = 47/290 (16%)
Query: 142 QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKE 201
+K++ I D ++ C L +A + +EM A G S Y +L Y K
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 202 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGS 260
+R EA ++ E+ +G + TY++LI A L M E PD+ +
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV-FT 386
Query: 261 YLTIMTGL---------------MENH--RPEL------------------MAAFLDEV- 284
Y T+++G M N +P + M DE+
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 285 VGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 344
V ++ T WN+++ F + G + F+ M F P +T+ +LI+ Y
Sbjct: 447 VCGLSPDIVT--WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 345 HFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVV 394
+ ++ +R L + G+ D + + L A+ +GG ++ + +V+
Sbjct: 505 FEQAMTVY---RRMLDA----GVTPDLSTYNTVLAALARGGMWEQSEKVL 547
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 8/230 (3%)
Query: 117 TFCAVVKEYLRKGNIKGLANLINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS 174
T+ ++ + R N+ A + N+ L+P +I A N + G++ SM SD A
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKP-DIVAHNVMLEGLLR---SMKKSD-AIK 353
Query: 175 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 234
+ M + G + Y +++ +CK++ A ++ SGLQ D Y LI
Sbjct: 354 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 413
Query: 235 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 294
+ + + + L ++M+E P +Y ++ + PE ++++ + IE
Sbjct: 414 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN-EIEPSI 472
Query: 295 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 344
H +N I+ ++ A E R + M P+D +Y LI G +S K
Sbjct: 473 HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 522
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 162/423 (38%), Gaps = 70/423 (16%)
Query: 20 ESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL-QEKINELEVLMGEFGCSNKKVF 78
E + A R + M GV PD + L + + V GL ++++ + M G S
Sbjct: 72 ERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFA 131
Query: 79 YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLI 138
+ LI + K G L+ S + + D +N C GLA+
Sbjct: 132 LNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCE-----------HGLAD-- 178
Query: 139 NEAQKLEPSNIKA---DNSIGYG-IVNACVSMGLSDKAHSILDE---MNALGGSVGLGVY 191
EA + +K +++ Y +++ +G +A +++DE +N + ++ L Y
Sbjct: 179 -EAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSY 237
Query: 192 I-------------------------PILKAYCKENRTAEATILVMEISSSGLQLDVETY 226
I+ CK + E +L+ E+ + + TY
Sbjct: 238 YNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTY 297
Query: 227 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 286
L+++ + ++ A +L+ M +P Y +M GL + ++
Sbjct: 298 TTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLE 357
Query: 287 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA---E 343
D ++ + +++ CKAG L A +M PN TY S+INGYV E
Sbjct: 358 DNQVP-NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 344 KHFNVLMLWNDVKRKLSSDGHKGIKFDHNLV-DAFLYAMVKGGFFDAAMQ--VVEKSHEM 400
+ ++L RK+ D N+V + F Y V G F A + +E S EM
Sbjct: 417 EAVSLL-------RKME---------DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 401 KIF 403
++
Sbjct: 461 RLI 463
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 136/319 (42%), Gaps = 18/319 (5%)
Query: 77 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 136
V YS++I+GYVK G L S +LR + D++ F T+ V+ + G +
Sbjct: 400 VTYSSMINGYVKKGMLEEAVS-LLRKMEDQNVVPNGF---TYGTVIDGLFKAGKEEMAIE 455
Query: 137 LINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILK 196
L E + + ++ +N I +VN +G + ++ +M + G ++ Y ++
Sbjct: 456 LSKEMRLI---GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Query: 197 AYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-P 255
+ K A E+ G+ DV +Y+ LI + + ++ ++ MRE + P
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEP 571
Query: 256 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 315
D+ ++ +M + E + D++ I+ N ++ C+ G++E+A
Sbjct: 572 DI-ATFNIMMNSQRKQGDSEGILKLWDKM-KSCGIKPSLMSCNIVVGMLCENGKMEEAIH 629
Query: 316 TFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVD 375
+M ++ PN TY ++ ++ KH ++ + LS GIK + +
Sbjct: 630 ILNQMMLMEIHPNLTTYRIFLD---TSSKHKRADAIFKTHETLLSY----GIKLSRQVYN 682
Query: 376 AFLYAMVKGGFFDAAMQVV 394
+ + K G A V+
Sbjct: 683 TLIATLCKLGMTKKAAMVM 701
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 143/333 (42%), Gaps = 41/333 (12%)
Query: 22 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 81
+ + + +V M + GV D++ + L ++ G +E M E G V Y+
Sbjct: 485 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNV 544
Query: 82 LISGYVKSGNLASMESTILRSLSDEDRKDWNFGG----------ETFCAVVKEYLRKGNI 131
LISG +K G + + DW + G TF ++ ++G+
Sbjct: 545 LISGMLKFGKVGA---------------DWAYKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Query: 132 KGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 189
+G+ L ++ + ++PS + + +G N G ++A IL++M + L
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCEN-----GKMEEAIHILNQMMLMEIHPNLT 644
Query: 190 VYIPILKAYCKENRTAEATILVME-ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 248
Y L K R A+A E + S G++L + Y+ LI T + A + D
Sbjct: 645 TYRIFLDTSSKHKR-ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGD 703
Query: 249 MREAR--VPDLKGSYLTIMTG-LMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFC 305
M EAR +PD ++ ++M G + +H + ++ + V+ + I +N+II
Sbjct: 704 M-EARGFIPD-TVTFNSLMHGYFVGSHVRKALSTY--SVMMEAGISPNVATYNTIIRGLS 759
Query: 306 KAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 338
AG +++ + M P+D TY +LI+G
Sbjct: 760 DAGLIKEVDKWLSEMKSRGMRPDDFTYNALISG 792
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 8/230 (3%)
Query: 117 TFCAVVKEYLRKGNIKGLANLINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS 174
T+ ++ + R N+ A + N+ L+P +I A N + G++ SM SD A
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKP-DIVAHNVMLEGLLR---SMKKSD-AIK 354
Query: 175 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 234
+ M + G + Y +++ +CK++ A ++ SGLQ D Y LI
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 235 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 294
+ + + + L ++M+E P +Y ++ + PE ++++ + IE
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN-EIEPSI 473
Query: 295 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 344
H +N I+ ++ A E R + M P+D +Y LI G +S K
Sbjct: 474 HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 523
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 5/185 (2%)
Query: 171 KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALI 230
KA S+L EM + Y +++ +C+ +A L E+ SG + T+ LI
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Query: 231 ETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV--GDP 288
+ + A ++M+ + Y +++ G + + A DEV+ GD
Sbjct: 220 DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS 279
Query: 289 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNV 348
+ +N++I FCK G+L++A F M PN TY LI+G K
Sbjct: 280 PCAIT---YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 349 LMLWN 353
L L N
Sbjct: 337 LQLLN 341
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 194 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE-A 252
+L+ Y + +T A ++ + G +V ++ L++ + + A SL R+MR +
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 253 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 312
+PD+ SY T++ G E E +E+ G W +I AFCKAG++++
Sbjct: 173 LMPDV-FSYNTVIRGFCEGKELEKALELANEMKGSG-CSWSLVTWGILIDAFCKAGKMDE 230
Query: 313 ARRTFRRMNFLQFEPNDQTYLSLINGY 339
A + M F+ E + Y SLI G+
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGF 257
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 163/409 (39%), Gaps = 40/409 (9%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLMGEF---- 70
C + V DA ++V M N G PD +TF L GY +I ELEV F
Sbjct: 173 CTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYC--------EIRELEVAHKVFDEMR 224
Query: 71 --GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSD--EDRKDWNFGGETFCAVVKEYL 126
G + S LI G++K ++ + +++ L + ++ D + F +V
Sbjct: 225 VCGIRPNSLTLSVLIGGFLKMRDVETGRK-LMKELWEYMKNETDTSMKAAAFANLVDSMC 283
Query: 127 RKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGGS 185
R+G + + E N++ YG ++++ + A I+ M + G
Sbjct: 284 REGYFNDIFEIAENMSLCESVNVE----FAYGHMIDSLCRYRRNHGAARIVYIMKSKGLK 339
Query: 186 VGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSL 245
Y I+ CK+ A L+ E S TY L+E+ D A ++
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 246 FRDMREARVPDLKGSYLTIMTGLMENHRP-ELMAAFLDEVVGDPRIEVGTHDWNSIIHAF 304
M D Y + GL P E++ + + GD R + + N++I+
Sbjct: 400 LELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPD--EYTLNTVINGL 457
Query: 305 CKAGRLEDARRTFRRMNFLQF-EPNDQTYLSLINGYVS---AEKHFNVLMLWNDVKRKLS 360
CK GR++DA + M +F P+ T +++ G ++ AE+ +VL R +
Sbjct: 458 CKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVL------NRVMP 511
Query: 361 SDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
+ K +N V L+ + KG D AM V + + + D Y
Sbjct: 512 ENKIKPGVVAYNAVIRGLFKLHKG---DEAMSVFGQLEKASVTADSTTY 557
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 144/357 (40%), Gaps = 49/357 (13%)
Query: 22 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 81
+DA+++ M+ G+ P+ +T+ L +G + +L M G V ++
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNA 273
Query: 82 LISGYVKSGNLASMESTILRSLSDED-----------RKDWNFGGETFCAVVKEY--LRK 128
L+ G+ K G + +E+ L L ++D D F + + Y + K
Sbjct: 274 LLDGFCKLGRM--VEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 129 GNIKG-------LANLINEAQKLE---------PSN-IKADNSIGYGIVNACVSMGLSDK 171
NIK L +++A K+E PS I D ++ A GL ++
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391
Query: 172 AHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 231
S+ EM+ + ++ + C+ EA + EI SG V T++ALI+
Sbjct: 392 GRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALID 451
Query: 232 TSMSSQDFQSAFSLFRDMREARVPDL--------KGSYLTIMT--GLMENHRPELMAAFL 281
S + + A L M R L S+ T++ +++ +R +A F
Sbjct: 452 GLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRD--LAHFA 509
Query: 282 DEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 338
D P I +N +I+ FC+AG ++ A + + P+ TY +LING
Sbjct: 510 D-TGSSPDIV----SYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLING 561
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Query: 170 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENR-TAEATILVMEISSSGLQLDVETYDA 228
+KAH + EM G V VY ++ AY + R A T+L SS Q DV TY
Sbjct: 167 EKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSI 226
Query: 229 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 288
LI++ + F L DMR + +Y T++ + M + L +++G+
Sbjct: 227 LIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGED 286
Query: 289 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
+ + NS + AF G++E + + EPN +T+ L++ Y
Sbjct: 287 DCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSY 337
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 170 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 229
D+ + ++ A G + Y ++KA CK RT EA IL E+ S GL+ V TY+++
Sbjct: 596 DRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSM 655
Query: 230 IETSMSSQDFQSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 288
I+ + S M E + PD+ +Y +++ GL + RP +E+ G
Sbjct: 656 IDGWCKEGEIDRGLSCIVRMYEDEKNPDVI-TYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Query: 289 ----RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 332
RI + ++I CK G +A FR M + EP+ Y
Sbjct: 715 CYPNRIT-----FMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 3/166 (1%)
Query: 194 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REA 252
++K C+ R +A + +++ G + A I+ + ++ LFRD+
Sbjct: 550 LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANG 609
Query: 253 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 312
PD+ +Y ++ L + R +E+V ++ +NS+I +CK G ++
Sbjct: 610 HCPDVI-AYHVLIKALCKACRTMEADILFNEMVSKG-LKPTVATYNSMIDGWCKEGEIDR 667
Query: 313 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 358
RM + P+ TY SLI+G ++ + + WN++K K
Sbjct: 668 GLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGK 713
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 147 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 206
S+ K D +++ C +G D SI+ EM+ LG Y I+ Y K E
Sbjct: 209 SDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEE 268
Query: 207 ATILVMEISSSGLQL-DVETYDALIETSMSSQDF---QSAFSLFRDMREARVPDLKGSYL 262
++ ++ G L DV T +++I + + ++ +S +S F+ M PD+ +
Sbjct: 269 MESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLM--GVQPDITTFNI 326
Query: 263 TIMT----GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFR 318
I++ G+ + M + +D + + T +N +I F KAGR+E FR
Sbjct: 327 LILSFGKAGMYKK-----MCSVMD-FMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFR 380
Query: 319 RMNFLQFEPNDQTYLSLINGYVSA 342
+M + +PN TY SL+N Y A
Sbjct: 381 KMKYQGVKPNSITYCSLVNAYSKA 404
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 14/292 (4%)
Query: 124 EYL-RKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNAL 182
E+L R N+ N + ++ +K + ++ + + GL ++ + M +
Sbjct: 108 EFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQM 167
Query: 183 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSS-GLQLDVETYDALIETSMSSQDFQS 241
G S + + +L K RT A L E+ + G+ D T++ LI +
Sbjct: 168 GISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDE 227
Query: 242 AFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR-IEVGTHDWNS 299
AF +F+DM PD+ +Y TI+ GL + ++ L ++ + + +
Sbjct: 228 AFRIFKDMELYHCNPDVV-TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTT 286
Query: 300 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKL 359
++ +C +++A F M +PN TY +LI G A + ++++K L
Sbjct: 287 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR-------YDEIKDIL 339
Query: 360 --SSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
+D D + + A G DAAM+V ++ MK+ D Y
Sbjct: 340 IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 103/244 (42%), Gaps = 15/244 (6%)
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 176
TF +++ L++G +L +E ++ + D+ ++N + D+A I
Sbjct: 175 TFNSLLSILLKRGRTGMAHDLFDEMRR--TYGVTPDSYTFNTLINGFCKNSMVDEAFRIF 232
Query: 177 DEMNALGGSVGLGVYIPILKAYCKENRT--AEATILVMEISSSGLQLDVETYDALIETSM 234
+M + + Y I+ C+ + A + M ++ + +V +Y L+
Sbjct: 233 KDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYC 292
Query: 235 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 294
Q+ A +F DM + +Y T++ GL E HR + + L + G+
Sbjct: 293 MKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL--IGGNDAFTTFA 350
Query: 295 HD---WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI------NGYVSAEKH 345
D +N +I A C AG L+ A + F+ M ++ P+ +Y LI N + AE
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 346 FNVL 349
FN L
Sbjct: 411 FNEL 414
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 141/363 (38%), Gaps = 58/363 (15%)
Query: 24 DAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINEL-EVLMGEFGCSNKKVFYSNL 82
++ ++ TM +G+ P LTF L + +G ++L + + +G + ++ L
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215
Query: 83 ISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIK----GLANLI 138
I+G+ K+ SM R D + N T+ ++ R G +K L+ ++
Sbjct: 216 INGFCKN----SMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 139 NEAQKLEPSNIKADNSI-GYG----------IVNACVSMGLSDKAHSI------------ 175
+A + P+ + + GY + + +S GL A +
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR 331
Query: 176 LDEMN--ALGGSVGLGVYIP-------ILKAYCKENRTAEATILVMEISSSGLQLDVETY 226
DE+ +GG+ + P ++KA+C A + E+ + L D +Y
Sbjct: 332 YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Query: 227 DALIETSMSSQDFQSAFSLFRDMREARV-------PDLKGSYLTIMTGLMENHRPE---- 275
LI T +F A +LF ++ E V L +Y + L N + +
Sbjct: 392 SVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEK 451
Query: 276 LMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSL 335
+ + V DP + ++I C+ G+ + A M +F P+ +TY L
Sbjct: 452 VFRQLMKRGVQDP------PSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELL 505
Query: 336 ING 338
I+G
Sbjct: 506 IDG 508
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 9/226 (3%)
Query: 108 RKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLE-PSNIKADNSIGYGIVNACVSM 166
RK ETFC V+++Y R + N +K + P N+ A N G+++A
Sbjct: 161 RKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFN----GLLSALCKS 216
Query: 167 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 226
KA + + M + Y +L+ + KE +A + E+ +G D+ TY
Sbjct: 217 KNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTY 275
Query: 227 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY-LTIMTGLMENHRPELMAAFLDEVV 285
+++ + A + R M + Y + + T EN E + FL+
Sbjct: 276 SIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMER 335
Query: 286 GDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 331
+ +V +NS+I AFCKA R+++ R + M PN ++
Sbjct: 336 SGMKADVAV--FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKS 379
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 7/187 (3%)
Query: 155 IGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVME 213
+ Y I V+ G D+A I+ M+ +Y ++ Y ENR EA +E
Sbjct: 273 VTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLE 332
Query: 214 ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMEN-H 272
+ SG++ DV +++LI + ++ + + ++M+ V S I+ L+E
Sbjct: 333 MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGE 392
Query: 273 RPELMAAFLDEV-VGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 331
+ E F + V +P + T +I FC+ +E A + ++ M P+ T
Sbjct: 393 KDEAFDVFRKMIKVCEPDADTYTM----VIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 448
Query: 332 YLSLING 338
+ LING
Sbjct: 449 FSVLING 455
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 195 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 254
+ +CK NR EA + E+ G + V +Y +I +F + + +M
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 255 PDLKGSYLTIMTGLMENHRPELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 313
P +Y TIM+ L N + E A + + + + +N +IH +AGRLE+A
Sbjct: 291 PPNSITYTTIMSSL--NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
Query: 314 RRTFR-RMNFLQFEPNDQTYLSLINGY 339
R FR M L N TY S+I Y
Sbjct: 349 ERVFRVEMPELGVSINTSTYNSMIAMY 375
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 195 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 254
+ +CK NR EA + E+ G + V +Y +I +F + + +M
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 255 PDLKGSYLTIMTGLMENHRPELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 313
P +Y TIM+ L N + E A + + + + +N +IH +AGRLE+A
Sbjct: 291 PPNSITYTTIMSSL--NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
Query: 314 RRTFR-RMNFLQFEPNDQTYLSLINGY 339
R FR M L N TY S+I Y
Sbjct: 349 ERVFRVEMPELGVSINTSTYNSMIAMY 375
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 145/364 (39%), Gaps = 29/364 (7%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL-------GYLYAVKG 55
P +CN L +L D +R M G RP T+ + G + A +G
Sbjct: 225 PKTRSCNGLLHRFA-KLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARG 283
Query: 56 LQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGG 115
L E+ M G V Y+++I G+ K G L + T+ E+ KD
Sbjct: 284 LFEE-------MKFRGLVPDTVTYNSMIDGFGKVGRL---DDTVCFF---EEMKDMCCEP 330
Query: 116 E--TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKA 172
+ T+ A++ + + G + E + N N + Y +V+A G+ +A
Sbjct: 331 DVITYNALINCFCKFGKLPIGLEFYREMK----GNGLKPNVVSYSTLVDAFCKEGMMQQA 386
Query: 173 HSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIET 232
+M +G Y ++ A CK ++A L E+ G++ +V TY ALI+
Sbjct: 387 IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG 446
Query: 233 SMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEV 292
++ + A LF M A V SY ++ G ++ + L+E+ G I+
Sbjct: 447 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG-IKP 505
Query: 293 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 352
+ + I C ++E A+ M + N Y +L++ Y + L L
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 353 NDVK 356
+++K
Sbjct: 566 DEMK 569
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 149/332 (44%), Gaps = 31/332 (9%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEKINELEVLMGEF---G 71
C++ +++DA R+ M +GV + +T+ L + GL E++ E E L G+ G
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL-----IDGLCDAERMKEAEELFGKMDTAG 467
Query: 72 CSNKKVFYSNLISGYVKSGNL-ASMESTILRSLSDEDRKDWNFGGETF----CAVVKEYL 126
Y+ LI G+VK+ N+ ++E +L L K TF C++ K
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALE--LLNELKGRGIKPDLLLYGTFIWGLCSLEK--- 522
Query: 127 RKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSV 186
I+ ++NE ++ IKA++ I +++A G + +LDEM L V
Sbjct: 523 ----IEAAKVVMNEMKE---CGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 575
Query: 187 GLGVYIPILKAYCKENRTAEATILVMEISSS-GLQLDVETYDALIETSMSSQDFQSAFSL 245
+ + ++ CK ++A IS+ GLQ + + A+I+ ++A +L
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635
Query: 246 FRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAF 304
F M ++ VPD + +Y ++M G + L A L + + + +++ + S++
Sbjct: 636 FEQMVQKGLVPD-RTAYTSLMDGNFKQGNV-LEALALRDKMAEIGMKLDLLAYTSLVWGL 693
Query: 305 CKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
+L+ AR M P++ +S++
Sbjct: 694 SHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 725
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 92/207 (44%), Gaps = 7/207 (3%)
Query: 156 GYGIVNACVS----MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILV 211
G+G+ +A S +G+ ++A +M +L + K +T +
Sbjct: 191 GFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF 250
Query: 212 MEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR-EARVPDLKGSYLTIMTGLME 270
++ +G + V TY+ +I+ D ++A LF +M+ VPD +Y +++ G +
Sbjct: 251 KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD-TVTYNSMIDGFGK 309
Query: 271 NHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQ 330
R + F +E+ D E +N++I+ FCK G+L +R M +PN
Sbjct: 310 VGRLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 331 TYLSLINGYVSAEKHFNVLMLWNDVKR 357
+Y +L++ + + + D++R
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRR 395
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 108/249 (43%), Gaps = 14/249 (5%)
Query: 173 HSILDEM---NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 229
S+ +EM ++ G + Y +++ K + A + SG ++D +TY+ L
Sbjct: 225 QSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNL 284
Query: 230 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAF-LDEVVGDP 288
+ ++ AF ++ M + +Y I+ L ++ R L AAF L + + +
Sbjct: 285 MMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGR--LDAAFKLFQQMKER 342
Query: 289 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNV 348
++ ++S++ + KAGRL+ + + + M P+ ++SLI+ Y A K
Sbjct: 343 KLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTA 402
Query: 349 LMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWR 408
L LW+++K+ G + + L + + K G + AM V K E F+
Sbjct: 403 LRLWDEMKK-------SGFRPNFGLYTMIIESHAKSGKLEVAMTVF-KDMEKAGFLPTPS 454
Query: 409 YKQAFMETH 417
+E H
Sbjct: 455 TYSCLLEMH 463
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 135/339 (39%), Gaps = 14/339 (4%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 62
PD A C L C E V A M +LG +P+ + F L KG ++ E
Sbjct: 250 PDNATCTLILTALC-ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFE 308
Query: 63 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 122
+ M G ++ LI G K G L+ + + K T+ +++
Sbjct: 309 MLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP---NVHTYTSMI 365
Query: 123 KEYLRKGNIKGLANLIN--EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
Y ++ + L + + Q L P N+ ++ +N G +A+ +++ M
Sbjct: 366 GGYCKEDKLNRAEMLFSRMKEQGLFP-NVNTYTTL----INGHCKAGSFGRAYELMNLMG 420
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G + Y + + CK++R EA L+ + S GL+ D TY LI+ D
Sbjct: 421 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 480
Query: 241 SAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 299
A + F M + D++ + + I + E F ++V + + S
Sbjct: 481 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF--QLVVSLGLIPTKETYTS 538
Query: 300 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 338
+I +CK G ++ A + F M P+ TY SLI+G
Sbjct: 539 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 93/240 (38%), Gaps = 44/240 (18%)
Query: 140 EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALG---------------- 183
+ Q L PS+I + ++ V +GL + A ++ DEM+ G
Sbjct: 174 QNQGLTPSSITMN-----CVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCF 228
Query: 184 -------------GSVGLGVYIP-------ILKAYCKENRTAEATILVMEISSSGLQLDV 223
G + G +IP IL A C+ A ++ G + ++
Sbjct: 229 RDGKIQEADRWLTGMIQRG-FIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNL 287
Query: 224 ETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLD 282
+ +LI+ + AF + +M R P++ ++ ++ GL + E
Sbjct: 288 INFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY-THTALIDGLCKRGWTEKAFRLFL 346
Query: 283 EVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 342
++V + H + S+I +CK +L A F RM PN TY +LING+ A
Sbjct: 347 KLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKA 406
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 28/282 (9%)
Query: 34 NLGVRPDELTFGFLGYLYAVKGLQEKIN---ELEVL--MGEFGCSNKKVFYSNLISGYVK 88
++ +RP+ ++F L +KG +K + +V M E V Y++LI +
Sbjct: 179 DMRLRPNSVSFNIL-----IKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCR 233
Query: 89 SGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKL---- 144
+ ++ +S L D +K TF ++K KG NEA+KL
Sbjct: 234 NDDMGKAKSL----LEDMIKKRIRPNAVTFGLLMKGLCCKGEY-------NEAKKLMFDM 282
Query: 145 EPSNIKADNSIGYGIVNACV-SMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENR 203
E K + YGI+ + + G D+A +L EM + +Y ++ C E R
Sbjct: 283 EYRGCKP-GLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR 341
Query: 204 TAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLT 263
EA ++ E+ G + + TY +I+ +DF S ++ M +R +++
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVC 401
Query: 264 IMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFC 305
++ GL++ + A F+ EV+G + G+ W +++ C
Sbjct: 402 MVAGLIKGGNLD-HACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 125/327 (38%), Gaps = 16/327 (4%)
Query: 36 GVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS- 94
GV P +T L G EK + L M E G S V Y+ LI G N+
Sbjct: 151 GVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKA 210
Query: 95 --MESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKAD 152
+ +T+ + +R N C K + N K L +++ +Q +N D
Sbjct: 211 LYLFNTMNKYGIRPNRVTCNIIVHALCQ--KGVIGNNNKKLLEEILDSSQ----ANAPLD 264
Query: 153 NSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVM 212
I ++++C G +A + EM+ VY I++ C A +
Sbjct: 265 IVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMC 324
Query: 213 EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM--- 269
++ G+ DV TY+ LI F A L M+ V + SY I+ GL
Sbjct: 325 DMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHG 384
Query: 270 ENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPND 329
+ +R + + P + + WN +I + + G A M +PN
Sbjct: 385 DVNRANEFLLSMLKSSLLPEVLL----WNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNV 440
Query: 330 QTYLSLINGYVSAEKHFNVLMLWNDVK 356
T +LI+GYV + + + N+++
Sbjct: 441 YTNNALIHGYVKGGRLIDAWWVKNEMR 467
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 109/253 (43%), Gaps = 8/253 (3%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+ PDV N + C E +A + GTM N GV PD++++ + + G +
Sbjct: 331 VNPDVFTYNTLISALCKE-GKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 61 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 120
NE + M + + + ++ +I GY + G+ +S S + LS + + T A
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPN----VYTNNA 445
Query: 121 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 180
++ Y++ G + + NE + + I D + ++ A ++G A + DEM
Sbjct: 446 LIHGYVKGGRLIDAWWVKNE---MRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEML 502
Query: 181 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 240
G + Y +++ C + R +A L+ I ++G+ +D + L + Q
Sbjct: 503 RRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPG 562
Query: 241 SAFSLFRDMREAR 253
A+ +++ R
Sbjct: 563 EAYLVYKKWLATR 575
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 174 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 233
S++D+M A + + I + Y + + EA ++ G +++ ++ +++T
Sbjct: 149 SLVDDMKA-KKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTL 207
Query: 234 MSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEV---VGDPR 289
S++ A +F M++ R PD+K SY T L+E EL +DEV + D
Sbjct: 208 SKSRNVGDAQKVFDKMKKKRFEPDIK-SY----TILLEGWGQELNLLRVDEVNREMKDEG 262
Query: 290 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFN 347
E + II+A CKA + E+A R F M +P+ + SLING + +EK N
Sbjct: 263 FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLING-LGSEKKLN 319
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 102/248 (41%), Gaps = 8/248 (3%)
Query: 99 ILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG 158
++ SL D+ + ETF + + Y R +K I K+E K ++S
Sbjct: 146 LIWSLVDDMKAKKLLSKETFALISRRYARARKVK---EAIGAFHKMEEFGFKMESSDFNR 202
Query: 159 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 218
+++ A + D+M + Y +L+ + +E + E+ G
Sbjct: 203 MLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEG 262
Query: 219 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 278
+ DV Y +I ++ ++ A F +M + + +++ GL +
Sbjct: 263 FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL 322
Query: 279 AFLD--EVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
F + + G P +E T +N+++ A+C + R+EDA +T M PN +TY ++
Sbjct: 323 EFFERSKSSGFP-LEAPT--YNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
Query: 337 NGYVSAEK 344
+ + ++
Sbjct: 380 HHLIRMQR 387
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 117/289 (40%), Gaps = 60/289 (20%)
Query: 4 DVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINEL 63
D + N L G C + S +AERV M N+GV+ D ++
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVS-------------------- 304
Query: 64 EVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILR---SLSDEDRKDWNFGGETFCA 120
YS++IS Y K G+L + R + DRK +N A
Sbjct: 305 ---------------YSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYN-------A 342
Query: 121 VVKEYLRKGNIKGLANLIN---EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 177
VV + + NL+ E + +EP N+ NS+ + A +++A + D
Sbjct: 343 VVHALAKASFVSEARNLMKTMEEEKGIEP-NVVTYNSLIKPLCKA----RKTEEAKQVFD 397
Query: 178 EMNALGGSVGLGVYIPILKAYCKENRTAEATI-LVMEISSSGLQLDVETYDALIETSMSS 236
EM GL I A+ + RT E L+ ++ G + VETY LI
Sbjct: 398 EM----LEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRW 453
Query: 237 QDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEV 284
+DF + L+ +M+E V PDL SY+ ++ GL N + E + E+
Sbjct: 454 RDFDNVLLLWDEMKEKTVGPDL-SSYIVMIHGLFLNGKIEEAYGYYKEM 501
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 103/248 (41%), Gaps = 12/248 (4%)
Query: 114 GGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAH 173
G + F +++ R N+ +LI + P + K+ N + G N +G +A
Sbjct: 231 GIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNV---IGSPREAE 287
Query: 174 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 233
+ EM +G + Y ++ Y K + L + ++ D + Y+A++
Sbjct: 288 RVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHAL 347
Query: 234 MSSQDFQSAFSLFRDMREAR--VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIE 291
+ A +L + M E + P++ +Y +++ L + + E DE+ +E
Sbjct: 348 AKASFVSEARNLMKTMEEEKGIEPNV-VTYNSLIKPLCKARKTEEAKQVFDEM-----LE 401
Query: 292 VGTHDWNSIIHAFCKAGRL-EDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLM 350
G HAF + R E+ +M + EP +TY+ LI NVL+
Sbjct: 402 KGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLL 461
Query: 351 LWNDVKRK 358
LW+++K K
Sbjct: 462 LWDEMKEK 469
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 30/204 (14%)
Query: 167 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 226
G ++A ++ EM G S GL + ++ Y + + A L+ ++ + G+ DV T+
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 227 DALIETSMSSQDFQSAFSLFRDMREARV-PDL--------KGSYLTIMTGLMENHRPELM 277
A+I + + A +FR M A V P+ S L ++ E H +
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 278 AAFLDEV-VGDPRIEV--------------------GTHDWNSIIHAFCKAGRLEDARRT 316
F+D+V VG+ +++ + WNS+I +C+AG A
Sbjct: 381 MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYEL 440
Query: 317 FRRMNFLQFEPNDQTYLSLINGYV 340
F RM PN T+ ++I+GY+
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYI 464
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 59/115 (51%)
Query: 222 DVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFL 281
DV T++++I + A+ LF M++A + ++ T+++G ++N
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 282 DEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 336
+ D +++ T WN II + + G+ ++A FR+M F +F PN T LSL+
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 127/326 (38%), Gaps = 56/326 (17%)
Query: 22 VTDAERVVGTMSNLGVRPDELTFG-FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYS 80
V A V+ M G PDE FG L L +++ E + F + + +++
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLR--YFT 256
Query: 81 NLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE 140
+L+ G+ + G + + +++ +NE
Sbjct: 257 SLLYGWCRVGKMMEAKYVLVQ------------------------------------MNE 280
Query: 141 AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 200
A EP + N + G NA G A+ +L +M G Y +++A CK
Sbjct: 281 AG-FEPDIVDYTNLLS-GYANA----GKMADAYDLLRDMRRRGFEPNANCYTVLIQALCK 334
Query: 201 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKG 259
+R EA + +E+ + DV TY AL+ + + DM ++ +P
Sbjct: 335 VDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMP---- 390
Query: 260 SYLTIMTGLMENHRPELMAAFLDEVVGDPRIE----VGTHDWNSIIHAFCKAGRLEDARR 315
S LT M ++ + + E L+ + +IE +G +N +I CK G +++A R
Sbjct: 391 SELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGI--YNVVIRLACKLGEVKEAVR 448
Query: 316 TFRRMNFLQFEPNDQTYLSLINGYVS 341
+ M P T++ +ING S
Sbjct: 449 LWNEMEENGLSPGVDTFVIMINGLAS 474
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 98/243 (40%), Gaps = 40/243 (16%)
Query: 116 ETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSI 175
E F +V+ + +K +++E K + D + +++A G A +
Sbjct: 184 ELFVVLVQRFASADMVKKAIEVLDEMPKF---GFEPDEYVFGCLLDALCKHGSVKDAAKL 240
Query: 176 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 235
++M + V L + +L +C+ + EA ++++++ +G + D+ Y L+ +
Sbjct: 241 FEDMR-MRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYAN 299
Query: 236 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 295
+ A+ L RDMR +G E +
Sbjct: 300 AGKMADAYDLLRDMRR------RG------------------------------FEPNAN 323
Query: 296 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 355
+ +I A CK R+E+A + F M + E + TY +L++G+ K ++ +D+
Sbjct: 324 CYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDM 383
Query: 356 KRK 358
+K
Sbjct: 384 IKK 386
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 137/360 (38%), Gaps = 47/360 (13%)
Query: 17 CELESVTDAERVVGTMS-NLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNK 75
C+ SV DA ++ M V T G+ K ++ K + V M E G
Sbjct: 229 CKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKY--VLVQMNEAGFEPD 286
Query: 76 KVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLA 135
V Y+NL+SGY +G +A L D R+ + + +++ + ++
Sbjct: 287 IVDYTNLLSGYANAGKMADAYDL----LRDMRRRGFEPNANCYTVLIQALCKVDRMEEAM 342
Query: 136 NLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPIL 195
+ E ++ E +AD +V+ G DK + +LD+M G Y+ I+
Sbjct: 343 KVFVEMERYE---CEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIM 399
Query: 196 KAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVP 255
A+ K+ E L+ ++ D+ Y+ +I + + + A L+ +M E +
Sbjct: 400 VAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLS 459
Query: 256 DLKGSYLTIMTGLME--------NHRPEL-------------MAAFLDEVVGDPRIEVGT 294
+++ ++ GL +H E+ + L+ V+ D ++E+
Sbjct: 460 PGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAK 519
Query: 295 HDWNSI----------------IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 338
W+ I IHA G ++A M + F P T+ L+ G
Sbjct: 520 DVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKG 579
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 19/226 (8%)
Query: 202 NRTAEATILVME--ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 259
N+ ++ ILV E + S Q DV ++ LI+ ++ A SL+ + E+R +
Sbjct: 132 NKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED 191
Query: 260 SYLTI-----MTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCK-AGRLEDA 313
+Y + M GL+E R E++ + P+ +G +N+ I K G E+A
Sbjct: 192 TYALLIKAYCMAGLIE--RAEVVLVEMQNHHVSPKT-IGVTVYNAYIEGLMKRKGNTEEA 248
Query: 314 RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNL 373
F+RM + +P +TY +IN Y A K + M W S I L
Sbjct: 249 IDVFQRMKRDRCKPTTETYNLMINLYGKASKSY---MSWKLYCEMRSHQCKPNICTYTAL 305
Query: 374 VDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKK 419
V+AF + G + A ++ E+ E + D + Y A ME++ +
Sbjct: 306 VNAF----AREGLCEKAEEIFEQLQEDGLEPDVYVY-NALMESYSR 346
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 136/347 (39%), Gaps = 21/347 (6%)
Query: 79 YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLI 138
++ L+ K G + E+ +LR + + D N TF + + R + K L+
Sbjct: 237 FNMLLDALCKCGLVKEGEA-LLRRMRHRVKPDAN----TFNVLFFGWCRVRDPKKAMKLL 291
Query: 139 NEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGV---YIPIL 195
E + + K +N ++ G+ D+A + D M G +V + ++
Sbjct: 292 EE---MIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMI 348
Query: 196 KAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVP 255
A K ++ E L+ + S+G DV TY +IE ++ A+ +M P
Sbjct: 349 VALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 408
Query: 256 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 315
+Y + L EN + + +V + R +N +I F + + A
Sbjct: 409 PDIVTYNCFLRVLCENRKTDEALKLYGRMV-ESRCAPSVQTYNMLISMFFEMDDPDGAFN 467
Query: 316 TFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVD 375
T+ M+ + +TY ++ING + L +V +KG+K + + D
Sbjct: 468 TWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEV-------VNKGLKLPYRVFD 520
Query: 376 AFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKLKV 422
+FL + + G A +V E H K + + A E K K+
Sbjct: 521 SFLMRLSEVGNLKAIHKVSE--HMKKFYNHSMARRFALSEKRKSTKL 565
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 109/245 (44%), Gaps = 42/245 (17%)
Query: 170 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 229
D+ + EM++LG + + ++ ++CKE++ EA + + G+ +V +++ +
Sbjct: 200 DRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMM 259
Query: 230 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR 289
I+ + + D + A L ++ + G++++ P +
Sbjct: 260 IDGACKTGDMRFALQLL-----GKMGMMSGNFVS----------PNAVT----------- 293
Query: 290 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVL 349
+NS+I+ FCKAGRL+ A R M + N++TY +L++ Y A L
Sbjct: 294 -------YNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 350 MLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 409
L +++ KG+ + + ++ +Y + G + AM V+ + + +D R+
Sbjct: 347 RLCDEMT-------SKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQID--RF 397
Query: 410 KQAFM 414
QA +
Sbjct: 398 TQAIV 402
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 19/226 (8%)
Query: 202 NRTAEATILVME--ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 259
N+ ++ ILV E + S Q DV ++ LI+ ++ A SL+ + E+R +
Sbjct: 154 NKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED 213
Query: 260 SYLTI-----MTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCK-AGRLEDA 313
+Y + M GL+E R E++ + P+ +G +N+ I K G E+A
Sbjct: 214 TYALLIKAYCMAGLIE--RAEVVLVEMQNHHVSPKT-IGVTVYNAYIEGLMKRKGNTEEA 270
Query: 314 RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNL 373
F+RM + +P +TY +IN Y A K + M W S I L
Sbjct: 271 IDVFQRMKRDRCKPTTETYNLMINLYGKASKSY---MSWKLYCEMRSHQCKPNICTYTAL 327
Query: 374 VDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKK 419
V+AF + G + A ++ E+ E + D + Y A ME++ +
Sbjct: 328 VNAF----AREGLCEKAEEIFEQLQEDGLEPDVYVY-NALMESYSR 368
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 14/259 (5%)
Query: 1 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 60
+ PD+ N + G C +L V +A++ V + G PD F + ++ +E
Sbjct: 151 VSPDIYTFNTLVNGYC-KLGYVVEAKQYVTWLIQAGCDPD--YFTYTSFITGHCRRKEVD 207
Query: 61 NELEVL--MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 118
+V M + GC +V Y+ LI G ++ + S +++ D + T+
Sbjct: 208 AAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNV----RTY 263
Query: 119 CAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 178
++ G NL +++ S IK D+ + ++ + S D+A +L+
Sbjct: 264 TVLIDALCGSGQKSEAMNLF---KQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEH 320
Query: 179 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 238
M G + Y ++K +CK+N +A L+ ++ L D+ TY+ LI SS +
Sbjct: 321 MLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGN 379
Query: 239 FQSAFSLFRDMREA-RVPD 256
SA+ L M E+ VP+
Sbjct: 380 LDSAYRLLSLMEESGLVPN 398
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 7/188 (3%)
Query: 159 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 218
++++ GL ++ + EM S + + ++ YCK EA V + +G
Sbjct: 126 LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAG 185
Query: 219 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 278
D TY + I ++ +AF +F++M + + SY ++ GL E + +
Sbjct: 186 CDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEAL 245
Query: 279 AFLDEVVGD---PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSL 335
+ L ++ D P + + +I A C +G+ +A F++M+ +P+D Y L
Sbjct: 246 SLLVKMKDDNCCPNVRT----YTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 336 INGYVSAE 343
I + S +
Sbjct: 302 IQSFCSGD 309
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 80/194 (41%), Gaps = 14/194 (7%)
Query: 194 ILKAYCKENRTAEATI-LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 252
++KA C+ + T +A + + +E+ G D TY LI A LF +M E
Sbjct: 162 LIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221
Query: 253 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 312
+Y +++ GL + + +L+E+ IE ++S++ CK GR
Sbjct: 222 DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM-KSKGIEPNVFTYSSLMDGLCKDGRSLQ 280
Query: 313 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN 372
A F M PN TY +LI G +K + L + +++ G K
Sbjct: 281 AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLD----RMNLQGLKP------ 330
Query: 373 LVDAFLYAMVKGGF 386
DA LY V GF
Sbjct: 331 --DAGLYGKVISGF 342
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 170 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 229
DKA IL M GG Y I+ CK+ A +L+ ++S SG DV TY+ +
Sbjct: 156 DKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTV 215
Query: 230 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR 289
I + + A ++D + P +Y T++ L+ + A EV+ D
Sbjct: 216 IRCMFDYGNAEQAIRFWKDQLQNGCPPFMITY-TVLVELVCRYCGSARAI---EVLEDMA 271
Query: 290 IEVGTHD---WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHF 346
+E D +NS+++ C+ G LE+ + + E N TY +L++ S E
Sbjct: 272 VEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHE--- 328
Query: 347 NVLMLWNDVKRKLS 360
W++V+ L+
Sbjct: 329 ----YWDEVEEILN 338
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 143/335 (42%), Gaps = 18/335 (5%)
Query: 27 RVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGY 86
RV M + G PD TF L Y G + +++ M G + Y+ L++
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 87 VKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGN---IKGLANLINEAQK 143
+ G+ S E+ I SD K + ++ +++ Y + GN I+ + N I E Q
Sbjct: 537 ARKGDWRSGENVI----SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQ- 591
Query: 144 LEPSNIKADNSIGYGIVN-ACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKEN 202
+ PS + + + N C ++ S++A ++ + G + ++ +L + + N
Sbjct: 592 IFPSWMLLRTLL---LANFKCRALAGSERAFTLFKKH---GYKPDMVIFNSMLSIFTRNN 645
Query: 203 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSY 261
+A ++ I GL D+ TY++L++ + + A + + + ++++ PDL SY
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLV-SY 704
Query: 262 LTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMN 321
T++ G + L E+ + I +N+ + + G + M
Sbjct: 705 NTVIKGFCRRGLMQEAVRMLSEMT-ERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
Query: 322 FLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 356
PN+ T+ +++GY A K+ + + +K
Sbjct: 764 KNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
>AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:338538-339905 FORWARD
LENGTH=409
Length = 409
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 18 ELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL----QEKINELEVLMGEFGCS 73
+L V DAER + +M N G D++T + LY+ G +E NE+++L
Sbjct: 177 KLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFNEIKLLGEPLDYR 236
Query: 74 NKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKG 133
+ Y ++I Y+++G ES +LR + D ++ G E + A++++Y G+ +G
Sbjct: 237 S----YGSMIMAYIRAGVPEKGES-LLREM---DSQEICAGREVYKALLRDYSMGGDAEG 288
Query: 134 LANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIP 193
+ + Q + I D + ++NA G S A + M G
Sbjct: 289 AKRVFDAVQ---IAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKCVAL 345
Query: 194 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 231
+L AY KE + EA ++E+ + L E L +
Sbjct: 346 VLAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLAQ 383
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 3/189 (1%)
Query: 170 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 229
++A ++L + LG + Y ++K Y + EA + + +G++ DV TY++L
Sbjct: 30 ERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSL 89
Query: 230 IETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 288
I + + LF +M + + PD+ SY T+M+ + R L E +
Sbjct: 90 ISGAAKNLMLNRVLQLFDEMLHSGLSPDM-WSYNTLMSCYFKLGRHGEAFKILHEDIHLA 148
Query: 289 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNV 348
+ G +N ++ A CK+G ++A F+ + + +P TY LING + + +V
Sbjct: 149 GLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSV 207
Query: 349 LMLWNDVKR 357
+ ++K+
Sbjct: 208 DWMMRELKK 216
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 149/387 (38%), Gaps = 34/387 (8%)
Query: 17 CELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLMGEFGCSN 74
C+ ++ AE ++ LGV PD +T+ L GY + G+ E + M E G
Sbjct: 24 CKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFI-GIDEAY-AVTRRMREAGIEP 81
Query: 75 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKD-WNFGGETFCAVVKEYLRKGNIKG 133
Y++LISG K+ L + L D W++ C Y + G
Sbjct: 82 DVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSC-----YFKLGRHGE 136
Query: 134 LANLINEAQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDEMNALGGSVGLGVYI 192
+++E L D Y I+ +A G +D A + + + L Y
Sbjct: 137 AFKILHEDIHLAGLVPGIDT---YNILLDALCKSGHTDNAIELFKHLKSRVKP-ELMTYN 192
Query: 193 PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 252
++ CK R ++ E+ SG + TY +++ ++ + LF M++
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 253 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 312
+ +++ L++ R E + E+V +N++++ + K G L+
Sbjct: 253 GYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDA 312
Query: 313 ARRTFRRMNFLQFEPNDQTYLSLINGYVS------AEKHFNVLMLWNDVKRKLSSDGHKG 366
+ +P+D T+ ++NG ++ AEKH L+ G G
Sbjct: 313 VDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKH-------------LACIGEMG 359
Query: 367 IKFDHNLVDAFLYAMVKGGFFDAAMQV 393
++ + + + K G D AM++
Sbjct: 360 MQPSVVTCNCLIDGLCKAGHVDRAMRL 386
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 115/285 (40%), Gaps = 51/285 (17%)
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 176
T+ ++K Y R G+ +++ + I+ D + +++ + ++ +
Sbjct: 50 TYNTLIKGYTR---FIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLF 106
Query: 177 DEMNALGGSVGLGVYIPILKAYCKENRTAEA-TILVMEISSSGLQLDVETYDALIETSMS 235
DEM G S + Y ++ Y K R EA IL +I +GL ++TY+ L++
Sbjct: 107 DEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCK 166
Query: 236 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 295
S +A LF+ ++ +RV +PELM
Sbjct: 167 SGHTDNAIELFKHLK-SRV------------------KPELMT----------------- 190
Query: 296 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 355
+N +I+ CK+ R+ R + + PN TY +++ Y ++ L L+ +
Sbjct: 191 -YNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM 249
Query: 356 KRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEM 400
K+ +G FD A + A++K G A + E HE+
Sbjct: 250 KK-------EGYTFDGFANCAVVSALIKTG---RAEEAYECMHEL 284
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 15/248 (6%)
Query: 167 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS-GLQLDVET 225
G+++ AH + DEM L + + +L AY + EA E+ G+ D+ T
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 226 YDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAA--FLD 282
Y+ +I+ S+F ++ + PDL ++ T L E +R EL +
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDL----ISFNTLLEEFYRRELFVEGDRIW 251
Query: 283 EVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 342
+++ + +NS + + + DA M P+ TY +LI Y
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVD 311
Query: 343 EKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKI 402
V+ +N++K KG+ D + + K G D A++V E++ + K+
Sbjct: 312 NNLEEVMKCYNEMK-------EKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKL 364
Query: 403 FVDKWRYK 410
YK
Sbjct: 365 LSRPNMYK 372
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 120/300 (40%), Gaps = 15/300 (5%)
Query: 43 TFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRS 102
TF L Y GL + M ++GC K+ +S +IS + AS + S
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRR-ASEAQSFFDS 246
Query: 103 LSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQ--KLEPSNIKADNSIGYGIV 160
L D D + +V+ + R G I + E + +EP N Y IV
Sbjct: 247 LKDRFEPDVI----VYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP------NVYTYSIV 296
Query: 161 -NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGL 219
+A G +AH + +M G + + +++ + K RT + + ++ G
Sbjct: 297 IDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGC 356
Query: 220 QLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAA 279
+ D TY+ LIE ++ ++A + M + + ++ S + +E R A
Sbjct: 357 EPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC-EVNASTFNTIFRYIEKKRDVNGAH 415
Query: 280 FLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
+ + + + E T +N ++ F + + + + M+ + EPN TY L+ +
Sbjct: 416 RMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMF 475
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 69/167 (41%)
Query: 186 VGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSL 245
V Y+P+L+AY K EA L+ +++ G + ++ +++ +S ++ +
Sbjct: 141 VAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMV 200
Query: 246 FRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFC 305
M+ ++P SY M E + E+VGD +EVG ++ + +
Sbjct: 201 VSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYI 260
Query: 306 KAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 352
K+G E AR + N Y LI Y S V+ LW
Sbjct: 261 KSGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLW 307
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 178/438 (40%), Gaps = 52/438 (11%)
Query: 1 MKPDVAACNAALEGCCCEL-ESVTDAERVVGTMSNL---GVRPDELTFGFLGYLYAVKGL 56
M+ D + + L EL + D + + S L G+ PD + + + +Y L
Sbjct: 216 MEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKL 275
Query: 57 QEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 116
+ L M E G V YS L+S YV++ S + K+ N +
Sbjct: 276 FREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVF------AEMKEVNCALD 329
Query: 117 -TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKAD---NSIGYG-IVNACVSMGLSDK 171
T C ++ ++ G +++ EA +L S K D N + Y I+ L +
Sbjct: 330 LTTCNIM------IDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGE 383
Query: 172 AHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 231
A + M + Y ++K Y K +AT LV E+ S G++ + TY +I
Sbjct: 384 AIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIIS 443
Query: 232 TSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIM-----TGLMENHRPELMAAFLDEVVG 286
+ A +LF+ +R + V + Y T++ GLM + + L L + +
Sbjct: 444 IWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNI- 502
Query: 287 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLS----LINGYVSA 342
PR + I KAGR E+A FR+ FE + +S +IN Y
Sbjct: 503 -PR--------ETAITILAKAGRTEEATWVFRQ----AFESGEVKDISVFGCMINLYSRN 549
Query: 343 EKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVV-EKSHEMK 401
+++ NV+ +V K+ + G+ D N++ L A K F+ A V E E
Sbjct: 550 QRYVNVI----EVFEKMRTAGYFP---DSNVIAMVLNAYGKQREFEKADTVYREMQEEGC 602
Query: 402 IFVDKWRYKQAFMETHKK 419
+F D+ ++ + + KK
Sbjct: 603 VFPDEVHFQMLSLYSSKK 620
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 101/253 (39%), Gaps = 21/253 (8%)
Query: 147 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 206
SN K N I G +G K +M+ G + L Y + CK + +
Sbjct: 187 SNTKIHNLILRGWSK----LGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWK 242
Query: 207 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 266
A L E+ S ++LDV Y+ +I +SQ + +FR+MRE ++ TI+
Sbjct: 243 AVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIK 302
Query: 267 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRT---FRRMNFL 323
L E+ R LDE+ P+ G +SI + C RLE F RM
Sbjct: 303 LLCEDGRMRDAYRMLDEM---PK--RGCQP-DSITY-MCLFSRLEKPSEILSLFGRMIRS 355
Query: 324 QFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVK 383
P TY+ L+ + VL +W +K G D +A + A+++
Sbjct: 356 GVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMK-------ESGDTPDSAAYNAVIDALIQ 408
Query: 384 GGFFDAAMQVVEK 396
G D A + E+
Sbjct: 409 KGMLDMAREYEEE 421
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 136/332 (40%), Gaps = 38/332 (11%)
Query: 78 FYSNLISGYVKSGNLASMEST------ILRSLSDEDRKDWNFGGETFCAVVKEYLRK--- 128
F+++++ Y G++A + T IL+S + ++ G TF ++ R
Sbjct: 87 FHNSVLQSY---GSIAVVNDTVKLFQHILKS-----QPNFRPGRSTFLILLSHACRAPDS 138
Query: 129 --GNIKGLANL-INEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGS 185
N+ + NL +N LEP + D + V + G D+A ++ E+
Sbjct: 139 SISNVHRVLNLMVNNG--LEPDQVTTDIA-----VRSLCETGRVDEAKDLMKELTEKHSP 191
Query: 186 VGLGVYIPILKAYCKENRTAEATILVMEISSS-GLQLDVETYDALIETSMSSQDFQSAFS 244
Y +LK CK V E+ ++ D+ ++ LI+ +S++ + A
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 245 LFRDMREARVPDLKGSYLTIMTGLMENHR-PELMAAFLDEVVGDPRIEVGTHDWNSIIHA 303
L + A Y TIM G + E + + + + + +E +N++I
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVY--KKMKEEGVEPDQITYNTLIFG 309
Query: 304 FCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG 363
KAGR+E+AR + M +EP+ TY SL+NG + L L +++
Sbjct: 310 LSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEME------- 362
Query: 364 HKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 395
+G + + L+ + K D M++ E
Sbjct: 363 ARGCAPNDCTYNTLLHGLCKARLMDKGMELYE 394
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 147/361 (40%), Gaps = 56/361 (15%)
Query: 22 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE---LEVLMGEFGCSNKKVF 78
V+ AE + + LG+R +E T + L AV G Q K+ E L + GE K V
Sbjct: 651 VSKAEMIADIIIRLGLRMEEET---IATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVI 707
Query: 79 YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKG--------- 129
S +I YV+ G L + S K + G T +V +G
Sbjct: 708 RS-MIDAYVRCGWLEDAYGLFMESAE----KGCDPGAVTISILVNALTNRGKHREAEHIS 762
Query: 130 ------NIK----GLANLIN---EAQKLE--------------PSNIKADNSIGYGIVNA 162
NI+ G LI EA KL+ P +I+ Y + +
Sbjct: 763 RTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQT-----YNTMIS 817
Query: 163 CVSMGLS-DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQL 221
GL DKA I G + +Y ++ Y K + +EA L E+ G++
Sbjct: 818 VYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKP 877
Query: 222 DVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAF 280
+Y+ +++ +S+ L + M R R DL +YLT++ E+ +
Sbjct: 878 GTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDL-STYLTLIQVYAESSQFAEAEKT 936
Query: 281 LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV 340
+ +V + I + ++S++ A KAG +E+A RT+ +M+ P+ +++ GY+
Sbjct: 937 IT-LVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYM 995
Query: 341 S 341
+
Sbjct: 996 T 996
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 22/260 (8%)
Query: 86 YVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLE 145
YV+ GN+ T L ++ + + CA+V + ++ +G A EA K+
Sbjct: 328 YVREGNM----ETTLEVVAAMRKAELKVTDCILCAIVNGFSKQ---RGFA----EAVKVY 376
Query: 146 PSNIKADNSIG---YGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKE 201
+K + G Y I +NA + +KA + DEM G + Y I+ Y K
Sbjct: 377 EWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKT 436
Query: 202 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY 261
R ++A L+ ++ G + ++ Y++LI+ + D + A ++++M+ A+V K SY
Sbjct: 437 RRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSY 496
Query: 262 LTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDW---NSIIHAFCKAGRLEDARRTFR 318
++++ N EL E+ + R+ G D ++ F K R+++ R +
Sbjct: 497 TSMISAY--NRSKELERCV--ELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQ 552
Query: 319 RMNFLQFEPNDQTYLSLING 338
M + + Y S +N
Sbjct: 553 DMKVEGTRLDARLYSSALNA 572
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 191 YIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM- 249
Y I+ CK + EA + + SGLQ DV+TY+ +I S A L+ +M
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFS----SLGRAEKLYAEMI 72
Query: 250 REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGR 309
R VPD +Y +++ GL + ++ + ++ +N++I+ +CKA R
Sbjct: 73 RRGLVPDTI-TYNSMIHGLCKQNK----------LAQARKVSKSCSTFNTLINGYCKATR 121
Query: 310 LEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
++D F M N TY +LI+G+
Sbjct: 122 VKDGMNLFCEMYRRGIVANVITYTTLIHGF 151
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 15/221 (6%)
Query: 133 GLANLINEA----QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGL 188
G AN +NEA +++ + K D +++ G D A + M A G S
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 189 GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 248
Y I+ K A L E+ G ++ TY+ +++ ++++Q+A L+RD
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 249 MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV-----VGDPRIEVGTHDWNSIIHA 303
M+ A K +Y +M L E A E+ + D + + ++
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV------YGLLVDL 583
Query: 304 FCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 344
+ KAG +E A + ++ M PN T SL++ ++ K
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 15/221 (6%)
Query: 133 GLANLINEA----QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGL 188
G AN +NEA +++ + K D +++ G D A + M A G S
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 189 GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 248
Y I+ K A L E+ G ++ TY+ +++ ++++Q+A L+RD
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 249 MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV-----VGDPRIEVGTHDWNSIIHA 303
M+ A K +Y +M L E A E+ + D + + ++
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV------YGLLVDL 583
Query: 304 FCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 344
+ KAG +E A + ++ M PN T SL++ ++ K
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 3/176 (1%)
Query: 169 SDKAHSILDEMNALGG--SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 226
S + + AL G SV Y IL +C RT +A ++ E+ G+ ++ TY
Sbjct: 174 SKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTY 233
Query: 227 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 286
+ +++ + + A+ F +M++ +Y T++ G + DE++
Sbjct: 234 NTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIR 293
Query: 287 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 342
+ + +N++I CK +E+A F M +EPN TY LI G A
Sbjct: 294 EGVLP-SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 121/314 (38%), Gaps = 48/314 (15%)
Query: 28 VVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYV 87
++ M +L + P TF + YA G +K +L + M E GC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQ------------- 159
Query: 88 KSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPS 147
+LAS +TIL L R V K Y ++G ++
Sbjct: 160 ---DLASF-NTILDVLCKSKR------------VEKAYELFRALRGRFSV---------- 193
Query: 148 NIKADNSIGYGIV-NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 206
+++ Y ++ N + + KA +L EM G + L Y +LK + + +
Sbjct: 194 -----DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRH 248
Query: 207 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIM 265
A +E+ ++DV TY ++ + + + A ++F +M RE +P + +Y ++
Sbjct: 249 AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV-ATYNAMI 307
Query: 266 TGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQF 325
L + E +E+V E +N +I AG +RM
Sbjct: 308 QVLCKKDNVENAVVMFEEMVRRG-YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGC 366
Query: 326 EPNDQTYLSLINGY 339
EPN QTY +I Y
Sbjct: 367 EPNFQTYNMMIRYY 380
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 197 AYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR-VP 255
+C ++ E + ++ G + D+ TY+ L+ + + AF L++ M R VP
Sbjct: 245 VFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVP 304
Query: 256 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 315
DL +Y +++ GL ++ R +V D I+ +N++I+A+CK G ++ +++
Sbjct: 305 DL-VTYTSLIKGLCKDGRVREAHQTFHRMV-DRGIKPDCMSYNTLIYAYCKEGMMQQSKK 362
Query: 316 TFRRMNFLQFEPNDQTYLSLINGYV 340
M P+ T ++ G+V
Sbjct: 363 LLHEMLGNSVVPDRFTCKVIVEGFV 387
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 162/393 (41%), Gaps = 45/393 (11%)
Query: 32 MSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKV---FYSNLISGYVK 88
M + G++PD +++ L Y ++++ + E E E L+ E N ++ S L YV+
Sbjct: 393 MKDDGLKPDPVSYRTLLYAFSIRHMVE---EAEGLIAEMDDDNVEIDEYTQSALTRMYVE 449
Query: 89 SGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSN 148
+ L S R N E + A + Y +G + + Q++
Sbjct: 450 AEMLEKSWSWFKRF-----HVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRT 504
Query: 149 IKADNSI--GYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 206
+ N + YGI +C +KA + + M + G + Y +++ + +
Sbjct: 505 VIEYNVMIKAYGISKSC------EKACELFESMMSYGVTPDKCTYNTLVQILASADMPHK 558
Query: 207 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIM 265
+ ++ +G D Y A+I + + A ++++M E + PD+ Y ++
Sbjct: 559 GRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVV-VYGVLI 617
Query: 266 TGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRM----N 321
+ + +++ E + + I + +NS+I + K G L++A +R++ N
Sbjct: 618 NAFADTGNVQQAMSYV-EAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN 676
Query: 322 FLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAM 381
Q+ P+ T +IN Y +++ +K++ ++ F +AM
Sbjct: 677 KTQY-PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEAN-------------EFTFAM 722
Query: 382 V-----KGGFFDAAMQVVEKSHEMKIFVDKWRY 409
+ K G F+ A Q+ ++ EMKI D Y
Sbjct: 723 MLCMYKKNGRFEEATQIAKQMREMKILTDPLSY 755
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 15/221 (6%)
Query: 133 GLANLINEA----QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGL 188
G AN +NEA +++ + K D +++ G D A + M A G S
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 189 GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 248
Y I+ K A L E+ G ++ TY+ +++ ++++Q+A L+RD
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 249 MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV-----VGDPRIEVGTHDWNSIIHA 303
M+ A K +Y +M L E A E+ + D + + ++
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV------YGLLVDL 583
Query: 304 FCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 344
+ KAG +E A + ++ M PN T SL++ ++ K
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 133/314 (42%), Gaps = 22/314 (7%)
Query: 98 TILRSLSDEDR-----------KDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEP 146
++L+S D DR D F A V+ K + ++NL++ + P
Sbjct: 52 SLLKSEKDPDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRP 111
Query: 147 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 206
++K++ + IV + D + + ++ S + +L A E
Sbjct: 112 -DLKSERFAAHAIV-LYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKE 169
Query: 207 ATILVMEISSS-GLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIM 265
A + +E+ G++ D+ETY+ +I+ S S++S+ +M + S+ ++
Sbjct: 170 AKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMI 229
Query: 266 TGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQF 325
+G + + + L ++ D + +G +N I + CK + ++A+ M
Sbjct: 230 SGFYAEDKSDEVGKVL-AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGM 288
Query: 326 EPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGG 385
+PN TY LI+G+ + + + + K+ ++G K D +Y + KGG
Sbjct: 289 KPNTVTYSHLIHGFCNEDD-------FEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGG 341
Query: 386 FFDAAMQVVEKSHE 399
F+ A+ + ++S E
Sbjct: 342 DFETALSLCKESME 355
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 171/384 (44%), Gaps = 33/384 (8%)
Query: 22 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 81
+ DA + M GV D +TF + + G + L M E G S Y+
Sbjct: 321 LNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNI 380
Query: 82 LISGYVKSGNL-ASMESTILRSLSDEDRKDWNFGGE-TFCAVVKEYLRKGNIKGLANLIN 139
L+S + +G++ A++E R + RK F T AV+ ++ + + +I
Sbjct: 381 LLSLHADAGDIEAALE--YYRKI----RKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIA 434
Query: 140 EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD--EMNALGGSVGLGVYIPILKA 197
E ++ ++I+ D I+ V+ GL +A ++ + +++ + S L I +
Sbjct: 435 E---MDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDV--- 488
Query: 198 YCKENRTAEA-TILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR-EARVP 255
Y ++ EA T+ + + SG + DV Y+ +I+ ++ + A SLF+ M+ + P
Sbjct: 489 YAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWP 548
Query: 256 D--LKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 312
D S ++ G+ + + ++A LD + G + ++I ++ + G L D
Sbjct: 549 DECTYNSLFQMLAGVDLVDEAQRILAEMLDS-----GCKPGCKTYAAMIASYVRLGLLSD 603
Query: 313 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN 372
A + M +PN+ Y SLING+ + M+ ++ + H G++ +H
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAESG------MVEEAIQYFRMMEEH-GVQSNHI 656
Query: 373 LVDAFLYAMVKGGFFDAAMQVVEK 396
++ + + A K G + A +V +K
Sbjct: 657 VLTSLIKAYSKVGCLEEARRVYDK 680
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 116/292 (39%), Gaps = 31/292 (10%)
Query: 36 GVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASM 95
G +PD TFG L V E ++EL L + G +L++ YVK G+LA+
Sbjct: 209 GKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANA 268
Query: 96 ----ESTILRSLSDEDRKDWNFGGETFCA-----VVKEYLRKGNIKGLANLINEAQKLEP 146
E T R L F + C + K+ +R +K + + + L+
Sbjct: 269 WKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIR---MKTKMDEVVVSSMLKI 325
Query: 147 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 206
A +IG I G + K+ I ++ ALG S ++ Y K +
Sbjct: 326 CTTIASVTIGRQI------HGFALKSSQIRFDV-ALGNS--------LIDMYAKSGEIED 370
Query: 207 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 266
A + E+ + DV ++ +LI +F+ A L+ M R+ ++L++++
Sbjct: 371 AVLAFEEMK----EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLS 426
Query: 267 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFR 318
+ EL D ++ IE + II ++G LE+A R
Sbjct: 427 ACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIR 478
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 190 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 249
++ ++K + ++ A +++++ G+ D + + LIE+ + Q + +F+ M
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 250 REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGR 309
++ V SY ++ ++ R + + +++V + +E H +N ++ F + R
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEG-VEPTRHTYNLMLWGFFLSLR 270
Query: 310 LEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 344
LE A R F M P+D T+ ++ING+ +K
Sbjct: 271 LETALRFFEDMKTRGISPDDATFNTMINGFCRFKK 305
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 97/243 (39%), Gaps = 7/243 (2%)
Query: 167 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 226
G+ ++ I +M LG + Y + K + R A ++ S G++ TY
Sbjct: 199 GIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTY 258
Query: 227 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 286
+ ++ S ++A F DM+ + ++ T++ G + + E+ G
Sbjct: 259 NLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKG 318
Query: 287 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHF 346
+ +I + ++I + R++D R F M EPN TY +L+ G A K
Sbjct: 319 N-KIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMV 377
Query: 347 NVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDK 406
+ ++ K H K D+++ L + K G AA +V++ + + +
Sbjct: 378 EAKNILKNMMAK-----HIAPK-DNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEA 431
Query: 407 WRY 409
Y
Sbjct: 432 GHY 434
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 22/245 (8%)
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 176
++ +V+K ++ I+ LA+L+N Q+L+ D +VN D A +I+
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELD---FVPDVDTYLIVVNELCKKNDRDAAFAII 570
Query: 177 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 236
D M LG + +Y I+ + K+ R EA ++ SG+Q D Y +I T +
Sbjct: 571 DAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARN 630
Query: 237 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVG 293
A L ++ + + +Y +++G ++ E +LD+++ D P + +
Sbjct: 631 GRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVL- 689
Query: 294 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWN 353
+ ++I F K G + + F M + + Y++L++G LW
Sbjct: 690 ---YTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSG------------LWR 734
Query: 354 DVKRK 358
+ RK
Sbjct: 735 AMARK 739
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 161/391 (41%), Gaps = 35/391 (8%)
Query: 2 KPDVAACNAALEGCC--CELESVTDAERVVGTMSNLGVRPDELTFG--FLGYLYAVKGLQ 57
+PDV + N+ ++G C ++ S + + +PD ++F F G+
Sbjct: 88 EPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGF-----SKM 142
Query: 58 EKINELEVLMGEF--GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGG 115
+ ++E+ V MG CS V YS I + KSG L L+S R +
Sbjct: 143 KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL----QLALKSFHSMKRDALSPNV 198
Query: 116 ETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACVSMGLSDKAHS 174
TF ++ Y + G+++ +L E +++ S N + Y +++ G +A
Sbjct: 199 VTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSL----NVVTYTALIDGFCKKGEMQRAEE 254
Query: 175 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 234
+ M VY I+ + + + A + ++ + G++LD+ Y +I
Sbjct: 255 MYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLC 314
Query: 235 SSQDFQSAFSLFRDMREAR-VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVG 293
+ + A + DM ++ VPD+ + T+M ++ R + +++ + E
Sbjct: 315 GNGKLKEATEIVEDMEKSDLVPDMV-IFTTMMNAYFKSGRMKAAVNMYHKLI-ERGFEPD 372
Query: 294 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING------YVSAEKHFN 347
+++I K G+L +A + F + ND Y LI+ ++ E+ F+
Sbjct: 373 VVALSTMIDGIAKNGQLHEA-----IVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFS 427
Query: 348 VLMLWNDVKRK-LSSDGHKGIKFDHNLVDAF 377
+ V K + + G+ NLVDAF
Sbjct: 428 KISEAGLVPDKFMYTSWIAGLCKQGNLVDAF 458
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 117 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 176
T+ +++ +++KG + ++++ + + AD + I+ MG +D A ++L
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQ---MFENFCAADIATYNVIIQGLGKMGRADLASAVL 688
Query: 177 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 236
D + GG + + +Y ++ A K R EAT L + S+G+ DV +Y+ +IE + +
Sbjct: 689 DRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKA 748
Query: 237 QDFQSAFSLFRDMREA 252
+ A+ + M +A
Sbjct: 749 GKLKEAYKYLKAMLDA 764
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 3/183 (1%)
Query: 175 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 234
+L M A + +Y I+K C + EA + + G D Y +I
Sbjct: 270 VLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFC 329
Query: 235 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 294
SA L+ +M + + + +Y ++ G + L+ AF +E++ + GT
Sbjct: 330 EKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGY--GGT 387
Query: 295 H-DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWN 353
N++I FC G+ ++A F+ M+ PN TY +LI G+ K L L+
Sbjct: 388 MLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYK 447
Query: 354 DVK 356
++K
Sbjct: 448 ELK 450
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 18/233 (7%)
Query: 15 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 74
CC + + M G P+ +TF L +Y L +K+NEL +L G +
Sbjct: 673 CCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVD 732
Query: 75 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGG-----ETFCAVVKEYLRKG 129
+ Y+ +I+ Y K+ + +M S I K+ F G E + ++ Y G
Sbjct: 733 V-ISYNTIIAAYGKNKDYTNMSSAI---------KNMQFDGFSVSLEAYNTLLDAY---G 779
Query: 130 NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 189
K + + ++++ S D+ ++N G D+ +L E+ G L
Sbjct: 780 KDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLC 839
Query: 190 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSA 242
Y ++KAY EA LV E+ + D TY L+ + +F A
Sbjct: 840 SYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEA 892
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 1/174 (0%)
Query: 167 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEA-TILVMEISSSGLQLDVET 225
G ++A + DEM G + +Y +L AY + N +A +IL S Q DV T
Sbjct: 138 GQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFT 197
Query: 226 YDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV 285
Y L++ + + F SL+++M E + + +++G R + M L +++
Sbjct: 198 YSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDML 257
Query: 286 GDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 339
+ N I+ F G+++ + + EP +T+ LI Y
Sbjct: 258 VSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSY 311
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 152/378 (40%), Gaps = 69/378 (18%)
Query: 2 KPDVAACNAALEGCCCELESVTDAERVVG---TMSNLGVRPDELTFGFL----------- 47
KPDV+ CN L G ++ E+ V M GV PD TF F+
Sbjct: 74 KPDVSICNHVLRGSAQSMK----PEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRS 129
Query: 48 -GYLYAVK------GLQEKINELEVLM----GEFGCSNK---------KVFYSNLISGYV 87
G+ + K L E + +L G+ G +++ KV +S++ SGY
Sbjct: 130 NGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYA 189
Query: 88 KSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPS 147
K G + + + +D+ WN T C KE ++ A++L
Sbjct: 190 KRGKIDE-AMRLFDEMPYKDQVAWNV-MITGCLKCKE-------------MDSARELFDR 234
Query: 148 NIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC-----KEN 202
+ D +++ V+ G +A I EM G + + +L A +
Sbjct: 235 FTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETG 294
Query: 203 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYL 262
+ IL SS + + ++ALI+ A +FR +++ DL ++
Sbjct: 295 KRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR---DL-STWN 350
Query: 263 TIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD--WNSIIHAFCKAGRLEDARRTFRRM 320
T++ GL +H + F +E+ R++V ++ + +I A +GR+++ R+ F M
Sbjct: 351 TLIVGLALHHAEGSIEMF-EEM---QRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLM 406
Query: 321 -NFLQFEPNDQTYLSLIN 337
+ EPN + Y +++
Sbjct: 407 RDMYNIEPNIKHYGCMVD 424
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 21/145 (14%)
Query: 218 GLQLDVETYDALIETSMSSQDFQSAFSLFRDMR-EARVPDLKGSYLTIMTGLMENHRPEL 276
GL+ DV TY++LI+ ++ + A+ L MR E PD+ +Y T++ GL +P+
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVI-TYTTVIGGLGLIGQPDK 299
Query: 277 MAAFLDEVVGDPRIEVGTHD----WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 332
L E+ E G + +N+ I FC A RL DA + M PN TY
Sbjct: 300 AREVLKEMK-----EYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 333 LSLINGYVSAEKHFNVLMLWNDVKR 357
F VL L ND+ R
Sbjct: 355 ----------NLFFRVLSLANDLGR 369
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 123/317 (38%), Gaps = 50/317 (15%)
Query: 36 GVRPDELTFGFLGYLYAVKGLQ--EKINE---LEVLMGEFGCSNKKVFYSNLISGYVKSG 90
G+ D T+G L +KGL +I + L +M G + V Y+ L+ K+G
Sbjct: 177 GIHGDVYTYGIL-----MKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNG 231
Query: 91 NLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 150
+ S ++ + + + +N +C NE QKL S +
Sbjct: 232 KVGRARS-LMSEMKEPNDVTFNILISAYC-------------------NE-QKLIQSMVL 270
Query: 151 ADNSIGYGIVNACVSM----------GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 200
+ G V V++ G +A +L+ + + GG V + ++K YC
Sbjct: 271 LEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCA 330
Query: 201 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGS 260
+ A +E+ G +VETY+ LI SA F DM+ + +
Sbjct: 331 LGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFAT 390
Query: 261 YLTIMTGLMENHRPELMAAFLD-----EVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 315
+ T++ GL R + L+ + V RI+ +N +I+ F K R EDA
Sbjct: 391 FNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARID----PYNCVIYGFYKENRWEDALE 446
Query: 316 TFRRMNFLQFEPNDQTY 332
+M L D+++
Sbjct: 447 FLLKMEKLFPRAVDRSF 463
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 112/298 (37%), Gaps = 60/298 (20%)
Query: 3 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL------ 56
PD + NAA+ C + + + R+ + GV+P GF GYL V+ L
Sbjct: 353 PDSSTFNAAM-SCLLKGHDLVETCRIFDGFVSRGVKP-----GFNGYLVLVQALLNAQRF 406
Query: 57 -------------------------------QEKINELEVLMGEF---GCSNKKVFYSNL 82
+I + + E G S V ++
Sbjct: 407 SEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTF 466
Query: 83 ISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQ 142
+SGY G++ + + + L + D TF ++ R IK + E
Sbjct: 467 LSGYSVRGDVKKVHGVLEKLLVHGFKPDV----ITFSLIINCLCRAKEIKDAFDCFKEML 522
Query: 143 K--LEPSNIKADNSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC 199
+ +EP N I Y I + +C S G +D++ + +M G S L Y ++++C
Sbjct: 523 EWGIEP------NEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFC 576
Query: 200 KENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPD 256
K + +A L+ + GL+ D TY LI+ S A +F + R VPD
Sbjct: 577 KMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634