Miyakogusa Predicted Gene
- Lj2g3v1252590.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1252590.2 Non Chatacterized Hit- tr|I1JIZ8|I1JIZ8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19205
PE,24.73,4e-18,PPR,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; seg,NULL; PPR_2,Penta,CUFF.36571.2
(624 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 786 0.0
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 676 0.0
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 5e-61
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 166 5e-41
AT4G17616.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 98 2e-20
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 8e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 87 5e-17
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 85 2e-16
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 4e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 83 6e-16
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 81 2e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 81 3e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 6e-14
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 8e-14
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 8e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 7e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 8e-13
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 70 4e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 70 5e-12
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 67 5e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 6e-11
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 65 1e-10
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 65 1e-10
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 64 5e-10
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 61 2e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 5e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 56 6e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 6e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 53 6e-07
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 53 7e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 52 1e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 6e-06
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 8e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26047372-26049348 REVERSE
LENGTH=658
Length = 658
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/665 (60%), Positives = 494/665 (74%), Gaps = 50/665 (7%)
Query: 1 MAKRVLTFLPHRQFSSIPEIPS-LYSFLQPSVFALNRNRTQPICEEPQXXXXXXXXXXXX 59
M ++ L + R FSS LYSFL+PS+F+ P PQ
Sbjct: 1 MFRKTLNSISRRHFSSSSPESPSLYSFLKPSLFSHKPITLSPSLSPPQNPKTLTP----- 55
Query: 60 XXDQVSTLQTTLHKSLITSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSL---GDI- 115
DQ S+ ++TLH SL TDEAWK+F+SLT+ + P K L NSLITHLS + G+
Sbjct: 56 --DQKSSFESTLHDSLNAHYTDEAWKAFRSLTAASSLPEKRLINSLITHLSGVEGSGESI 113
Query: 116 -HNLKRAFASAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNR------ 168
H LKRAFASA +++E++P++LE ET+ +L+SMK A A PA ALV+CMFKNR
Sbjct: 114 SHRLKRAFASAAYVIEKDPILLEFETVRTLLESMKLAKAAGPALALVKCMFKNRYFVPFD 173
Query: 169 ----------------------------VALDEKLEFMKPDVAACNAALEGCCCELESVT 200
+++DEKLEFMKPD+ A NAALE CC ++ES+
Sbjct: 174 LWGHLVIDICRENGSLAPFLKVFKESCRISVDEKLEFMKPDLVASNAALEACCRQMESLA 233
Query: 201 DAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLI 260
DAE V+ +M+ LGV+PDEL+FGFL YLYA KGL+EKI+ELE LM FG +++++ YSN+I
Sbjct: 234 DAENVIESMAVLGVKPDELSFGFLAYLYARKGLREKISELENLMDGFGFASRRILYSNMI 293
Query: 261 SGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQK 320
SGYVKSG+L S+ IL SL E ++ +F ET+C +VK ++ ++K LA +I EAQK
Sbjct: 294 SGYVKSGDLDSVSDVILHSLK-EGGEESSFSVETYCELVKGFIESKSVKSLAKVILEAQK 352
Query: 321 LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGG-SVGLGVYIPILKAYCKEN 379
LE S + D+S+G+GI+NACV++G SDKAHSIL+EM A GG SVG+GVY+PILKAYCKE
Sbjct: 353 LESSYVGVDSSVGFGIINACVNLGFSDKAHSILEEMIAQGGGSVGIGVYVPILKAYCKEY 412
Query: 380 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYL 439
RTAEAT LV EISSSGLQLDVE +ALIE SM++QDF SAF+LFRDMRE RV DLKGSYL
Sbjct: 413 RTAEATQLVTEISSSGLQLDVEISNALIEASMTNQDFISAFTLFRDMRENRVVDLKGSYL 472
Query: 440 TIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNF 499
TIMTGL+EN RPELMAAFLDEVV DPR+EV +HDWNSIIHAFCK+GRLEDARRTFRRM F
Sbjct: 473 TIMTGLLENQRPELMAAFLDEVVEDPRVEVNSHDWNSIIHAFCKSGRLEDARRTFRRMVF 532
Query: 500 LQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSS-DGHKGIKFDHNLVDAFLYAM 558
L++EPN+QTYLSLINGYVS EK+FNVL+LWN++K K+SS + K + DH LVDAFLYA+
Sbjct: 533 LRYEPNNQTYLSLINGYVSGEKYFNVLLLWNEIKGKISSVEAEKRSRLDHALVDAFLYAL 592
Query: 559 VKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKLKVAKLRKRNTKKMEAVIAFKN 618
VKGGFFDAAMQVVEKS EMKIFVDKWRYKQAFMETHKKL++ KLRKRN KKME+++AFKN
Sbjct: 593 VKGGFFDAAMQVVEKSQEMKIFVDKWRYKQAFMETHKKLRLPKLRKRNYKKMESLVAFKN 652
Query: 619 WAGLN 623
WAGLN
Sbjct: 653 WAGLN 657
>AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:25933023-25934882 FORWARD
LENGTH=619
Length = 619
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/599 (56%), Positives = 423/599 (70%), Gaps = 51/599 (8%)
Query: 63 QVSTLQTTLHKSLITSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDI------- 115
Q S+ ++TLH SLIT DTD+AWK F+S + + P K L NSLITHLSS +
Sbjct: 27 QKSSFESTLHHSLITHDTDQAWKVFRSFAAASSLPDKRLLNSLITHLSSFHNTDQNTSLR 86
Query: 116 HNLKRAFASAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNR------- 168
H LKRAF S +++E++P++LE ET+ +L+SMK A + PA ALV CMFKNR
Sbjct: 87 HRLKRAFVSTTYVIEKDPILLEFETVRTVLESMKLAKASGPALALVECMFKNRYFVPFDL 146
Query: 169 ---------------------------VALDEKLEFMKPDVAACNAALEGCCCELESVTD 201
+A+DEKL+FMKPD+ A NAALE CC ++ES+ D
Sbjct: 147 WGDLLIDVCRENGSLAAFLKVFRESCRIAVDEKLDFMKPDLVASNAALEACCRQMESLAD 206
Query: 202 AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLIS 261
AE ++ +M LGV+PDEL+FGFL YLYA KGL+EKI+ELE LM G +++++ YS++IS
Sbjct: 207 AENLIESMDVLGVKPDELSFGFLAYLYARKGLREKISELEDLMDGLGFASRRILYSSMIS 266
Query: 262 GYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKL 321
GYVKSG+L S IL SL +F ET+C +V+ ++ +++ LA LI EAQKL
Sbjct: 267 GYVKSGDLDSASDVILCSLKGVGEAS-SFSEETYCELVRGFIESKSVESLAKLIIEAQKL 325
Query: 322 EPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRT 381
E + S+G+GIVNACV +G S K SILDE+NA GGS G+GVY+PILKAYCKE RT
Sbjct: 326 ESMSTDVGGSVGFGIVNACVKLGFSGK--SILDELNAQGGSGGIGVYVPILKAYCKEGRT 383
Query: 382 AEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTI 441
+EAT LV EISSSGLQLDVETY+ +IE SM+ DF SA +LFRDMRE RV DLK YLTI
Sbjct: 384 SEATQLVTEISSSGLQLDVETYNTMIEASMTKHDFLSALTLFRDMRETRVADLKRCYLTI 443
Query: 442 MTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQ 501
MTGL+EN RPELMA F++EV+ DPR+EV +HDWNSIIHAFCK+GRL DA+ TFRRM FLQ
Sbjct: 444 MTGLLENQRPELMAEFVEEVMEDPRVEVKSHDWNSIIHAFCKSGRLGDAKSTFRRMTFLQ 503
Query: 502 FEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKG 561
+EPN+QTYLSLINGYVS EK+F V+++W + K K K +H L DAFL A+VKG
Sbjct: 504 YEPNNQTYLSLINGYVSCEKYFEVVVIWKEFK-------DKKAKLEHALADAFLNALVKG 556
Query: 562 GFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKLKVAKLRKRNTKKMEAVIAFKNWA 620
GFF A+QV+EK EMKIFVDKWRYK FMET K L++ KLRKR KK+E + AFKNWA
Sbjct: 557 GFFGTALQVIEKCQEMKIFVDKWRYKATFMETQKNLRLPKLRKRKMKKIEFLDAFKNWA 615
>AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:744026-746407 REVERSE
LENGTH=793
Length = 793
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 198/339 (58%), Gaps = 13/339 (3%)
Query: 293 ETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSI 352
E + + K +L G +K LA + +A+ E S + +DNS+ ++NAC+S+G+ D+AH +
Sbjct: 460 EIYVKLAKAFLESGKMKELAKFLLKAEH-EDSPVSSDNSMLINVINACISLGMLDQAHDL 518
Query: 353 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 412
LDEM G G VY +LKAYC N+T E T L+ + +G+QLD Y+ALI++ +
Sbjct: 519 LDEMRMAGVRTGSSVYSSLLKAYCNTNQTREVTSLLRDAQKAGIQLDSSCYEALIQSQVI 578
Query: 413 SQDFQSAFSLFRDMREARVPDLKGS---YLTIMTGLMENHRPELMAAFLDEVVGDPRIEV 469
D A ++F++M+EA++ L+G + ++ G N LM+ L E+ ++
Sbjct: 579 QNDTHGALNVFKEMKEAKI--LRGGNQKFEKLLKGCEGNAEAGLMSKLLREIREVQSLDA 636
Query: 470 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVS-AEKHFNVLML 528
G HDWN++IH F K G ++DA + +RM L PN QT+ S++ GY + K+ V L
Sbjct: 637 GVHDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSMVTGYAAIGSKYTEVTEL 696
Query: 529 WNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQ 588
W ++K ++ +KFD L+DA LY V+GGFF A +VVE + +FVDK++Y+
Sbjct: 697 WGEMKSIAAATS--SMKFDQELLDAVLYTFVRGGFFSRANEVVEMMEKKNMFVDKYKYRM 754
Query: 589 AFMETHK---KLKVAKLRKRNT-KKMEAVIAFKNWAGLN 623
F++ HK K K K++ + KK EA + FK W GL+
Sbjct: 755 LFLKYHKTAYKGKAPKVQSESQLKKREAGLVFKKWLGLS 793
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 171/346 (49%), Gaps = 18/346 (5%)
Query: 295 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 354
+ ++K Y++ G + A ++ ++ + N D +V+A V+ GL D+A +L
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 355 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEIS-SSGLQLDVETYDALIETSMSS 413
EM +G Y +LK YCK+ + A L+ E++ +G++ DV +Y+ +I+ +
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILI 536
Query: 414 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 473
D A + F +MR + K SY T+M + +P+L DE++ DPR++V
Sbjct: 537 DDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIA 596
Query: 474 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 533
WN ++ +C+ G +EDA+R RM F PN TY SL NG A K + L+LW ++K
Sbjct: 597 WNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIK 656
Query: 534 RKL-----------SSD-GHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFV 581
+ SSD +K D L+D V+ FF A++++ E I
Sbjct: 657 ERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPP 716
Query: 582 DKWRYKQAFMETHKKLKVAKLRK-----RNTKKMEAVIAFKNWAGL 622
+K +YK+ ++E H ++ +K R ++ A AFK W GL
Sbjct: 717 NKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGL 762
>AT4G17616.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:9819608-9821632 FORWARD
LENGTH=674
Length = 674
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 131/661 (19%), Positives = 262/661 (39%), Gaps = 149/661 (22%)
Query: 67 LQTTLHKSLITSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAV 126
L+ L +L D+AW FK FP + N +T LS D L +A
Sbjct: 57 LKKKLETALKDHRVDDAWDVFKDFKRLYGFPESVIMNRFVTVLSYSSDAGWLCKASDLTR 116
Query: 127 FLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRVAL--------------- 171
+++NP +L + + + S+ A A +++R M + L
Sbjct: 117 LALKQNPGMLSGDVLTKLSLSLARAQMVESACSILRIMLEKGYVLTSDVLRLVVMHMVKT 176
Query: 172 ---------------DEKLEF------------MKPDVAACNAALEGCCCELESVTDAER 204
D +EF +KPD N L G C +
Sbjct: 177 EIGTCLASNYLVQVCDRFVEFNVGKRNSSPGNVVKPDTVLFNLVL-GSCVRFGFSLKGQE 235
Query: 205 VVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFG---CSNKKVFYSNLIS 261
++ M+ + V D + + +Y + G+++++ + + +G+ + + F+ NL+S
Sbjct: 236 LIELMAKVDVVADAYSIVIMSCIYEMNGMRDELRKFKEHIGQVPPQLLGHYQHFFDNLLS 295
Query: 262 GYVKSGNLASM--------ESTILRSL------SDEDR---------------------- 285
K ++ S +S +L S+ S++ R
Sbjct: 296 LEFKFDDIGSAGRLALDMCKSKVLVSVENLGFDSEKPRVLPVGSHHIRSGLKIHISPKLL 355
Query: 286 -KDWNFG------------------GETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNI 326
+D + G +T +V Y R N+ L+ L+ L S +
Sbjct: 356 QRDSSLGVDTEATFVNYSNSKLGITNKTLAKLVYGYKRHDNLPELSKLLFS---LGGSRL 412
Query: 327 KADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 386
AD +++ACV++G + AH ILD+MN+ G + L Y +L Y K A +
Sbjct: 413 CAD------VIDACVAIGWLEAAHDILDDMNSAGYPMELATYRMVLSGYYKSKMLRNAEV 466
Query: 387 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 446
L+ +++ +GL D + + ++ +D ++ ++R+ V ++
Sbjct: 467 LLKQMTKAGLITD-PSNEIVVSPETEEKDSENT-----ELRDLLVQEINAG--------K 512
Query: 447 ENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPND 506
+ P ++ ++ NS ++ FCKA DA T+R++ ++ P
Sbjct: 513 QMKAPSML-----------------YELNSSLYYFCKAKMQGDALITYRKIPKMKIPPTV 555
Query: 507 QTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDA 566
Q++ LI+ Y S + + ++W D+KR ++S K +K +L++ + ++GG+F+
Sbjct: 556 QSFWILIDMYSSLGMYREITIVWGDIKRNIAS---KNLKTTQDLLEKLVVNFLRGGYFER 612
Query: 567 AMQVVEKSHEMKIFVDKWRYKQAFMETHKKLKVA-----KLRKRNTKKMEAVIAFKNWAG 621
M+++ E ++ D YK +++ HK L + + +++E V F+ G
Sbjct: 613 VMELISYMKENDMYNDLTMYKNEYLKLHKNLYRTLKASDAVTEAQAQRLEHVKTFRKLVG 672
Query: 622 L 622
+
Sbjct: 673 I 673
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 20/364 (5%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 238
+PDV ++ + G C + V DA +V M +G RPD + + + GL
Sbjct: 136 EPDVVTVSSLINGFC-QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 298
EL M G V Y++L++G SG S R + D +D TF AV
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRW----SDAARLMRDMVMRDIVPNVITFTAV 250
Query: 299 VKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 356
+ ++++G L E + ++P ++ NS+ +N G D+A +LD M
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDP-DVFTYNSL----INGLCMHGRVDEAKQMLDLM 305
Query: 357 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 416
G + Y ++ +CK R E T L E++ GL D TY+ +I+ +
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 417 QSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 476
+A +F M ++R P+++ +Y ++ GL N R E A L E + IE+ +N
Sbjct: 366 DAAQEIFSRM-DSR-PNIR-TYSILLYGLCMNWRVE-KALVLFENMQKSEIELDITTYNI 421
Query: 477 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKL 536
+IH CK G +EDA FR ++ +P+ +Y ++I+G+ + +L+ RK+
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY----RKM 477
Query: 537 SSDG 540
DG
Sbjct: 478 QEDG 481
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 177/399 (44%), Gaps = 23/399 (5%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 237
+KPDV+ N ++ C + A ++ M + G+ PDE TF + Y +G +
Sbjct: 185 IKPDVSTFNVLIKALC-RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 238 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE-TFC 296
+ M EFGCS V + ++ G+ K G + L + + +D F + TF
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA----LNFIQEMSNQDGFFPDQYTFN 299
Query: 297 AVVKEYLRKGNIKGLANLINEA-QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 355
+V + G++K +++ Q+ ++ NS+ G+ +G +A +LD+
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK----LGEVKEAVEVLDQ 355
Query: 356 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 415
M S Y ++ CKEN+ EAT L ++S G+ DV T+++LI+ +++
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 416 FQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLD--EVVGDPRIEVGTHD 473
+ A LF +MR + +Y ++ L + + L E+ G R +
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI---T 472
Query: 474 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 533
+N++I FCKA + +A F M N TY +LI+G + + + L +
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD--- 529
Query: 534 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 572
++ +G K K+ +N + L +GG A +V+
Sbjct: 530 -QMIMEGQKPDKYTYN---SLLTHFCRGGDIKKAADIVQ 564
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 153/343 (44%), Gaps = 20/343 (5%)
Query: 183 AACNAALEGCCCELESVTDAERVVGTMSNL-GVRPDELTFGFL-GYLYAVKGLQEKINEL 240
+ N + G C E V DA + MSN G PD+ TF L L ++ I +
Sbjct: 260 VSVNVIVHGFCKE-GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318
Query: 241 EVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVK 300
+V++ E G Y+++ISG K G + + + ++ +D + T+ ++
Sbjct: 319 DVMLQE-GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT----RDCSPNTVTYNTLIS 373
Query: 301 EYLRKGNIKGLANLINEAQKLEPSNIKAD----NSIGYGIVNACVSMGLSDKAHSILDEM 356
++ ++ L A+ L I D NS+ G+ C++ A + +EM
Sbjct: 374 TLCKENQVEEATEL---ARVLTSKGILPDVCTFNSLIQGL---CLTRN-HRVAMELFEEM 426
Query: 357 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 416
+ G Y ++ + C + + EA ++ ++ SG V TY+ LI+ +
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 417 QSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 476
+ A +F +M V +Y T++ GL ++ R E A +D+++ + + + + +NS
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNS 545
Query: 477 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 519
++ FC+ G ++ A + M EP+ TY +LI+G A
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 146/355 (41%), Gaps = 13/355 (3%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTF-GFLGYLYAVKGLQEKIN 238
PD N + G C + V A ++ M G PD T+ + L + ++E +
Sbjct: 293 PDQYTFNTLVNGLC-KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 298
L+ ++ CS V Y+ LIS K N + + R L+ K TF ++
Sbjct: 352 VLDQMITR-DCSPNTVTYNTLISTLCKE-NQVEEATELARVLTS---KGILPDVCTFNSL 406
Query: 299 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 358
++ N + L E + + D ++++ S G D+A ++L +M
Sbjct: 407 IQGLCLTRNHRVAMELFEE---MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 359 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 418
G + + Y ++ +CK N+T EA + E+ G+ + TY+ LI+ S+ +
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 419 AFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSI 477
A L M E + PD K +Y +++T + AA + + + E + ++
Sbjct: 524 AAQLMDQMIMEGQKPD-KYTYNSLLTHFCRGGDIK-KAADIVQAMTSNGCEPDIVTYGTL 581
Query: 478 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 532
I CKAGR+E A + R + Y +I G K + L+ ++
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 141/366 (38%), Gaps = 33/366 (9%)
Query: 93 HQAFPPKPLT-NSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETIHAMLDSMKGA 151
+ + P T NS+I+ L LG++ K A ++ R+ + T + ++ ++
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEV---KEAVEVLDQMITRD-CSPNTVTYNTLISTLCKE 378
Query: 152 NTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVV----G 207
N A L R + + PDV N+ ++G C +T RV
Sbjct: 379 NQVEEATELARVLTSKGIL---------PDVCTFNSLIQGLC-----LTRNHRVAMELFE 424
Query: 208 TMSNLGVRPDELTFGFLGYLYAVKG-LQEKINELEVLMGEFGCSNKKVFYSNLISGYVKS 266
M + G PDE T+ L KG L E +N L+ M GC+ + Y+ LI G+ K+
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ-MELSGCARSVITYNTLIDGFCKA 483
Query: 267 GNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNI 326
E + + + T+ ++ + ++ A L+++ +
Sbjct: 484 NKTREAEEI----FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ---MIMEGQ 536
Query: 327 KADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 386
K D ++ G KA I+ M + G + Y ++ CK R A+
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 387 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA-RVPDLKGSYLTIMTGL 445
L+ I G+ L Y+ +I+ + A +LFR+M E P SY + GL
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656
Query: 446 MENHRP 451
P
Sbjct: 657 CNGGGP 662
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 116/269 (43%), Gaps = 12/269 (4%)
Query: 250 SNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIK 309
S + Y ++ +SG+ M+ + L D G TF +++ Y +
Sbjct: 80 SPEPALYEEILLRLGRSGSFDDMK----KILEDMKSSRCEMGTSTFLILIESYAQFELQD 135
Query: 310 GLANLINEAQKLEPSNIKADNSIGYGIVNACV---SMGLSDKAHSILDEMNALGGSVGLG 366
+ ++++ ++ +K D ++N V S+ L + +H+ +M+ G +
Sbjct: 136 EILSVVD--WMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA---KMSVWGIKPDVS 190
Query: 367 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 426
+ ++KA C+ ++ A +++ ++ S GL D +T+ +++ + D A + M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 427 REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGR 486
E S I+ G + R E F+ E+ + +N++++ CKAG
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 487 LEDARRTFRRMNFLQFEPNDQTYLSLING 515
++ A M ++P+ TY S+I+G
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 212/497 (42%), Gaps = 98/497 (19%)
Query: 129 MERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAA 188
M ++ V S ++ S+ N A L+ MF L PD N
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF---------LMGCVPDAETFNDV 293
Query: 189 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL-------GYLYAVKGLQEKINELE 241
+ G C + + + +A ++V M G PD++T+G+L G + A K L +I + E
Sbjct: 294 ILGLC-KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 242 VLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE----TFCA 297
+ V ++ LI G+V G L ++ + ++ ++G T+ +
Sbjct: 353 I-----------VIFNTLIHGFVTHGRLDDAKAVLSDMVT-------SYGIVPDVCTYNS 394
Query: 298 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGI-VNACVSMGLSDKAHSILDEM 356
++ Y ++G + GLA + + K N Y I V+ +G D+A+++L+EM
Sbjct: 395 LIYGYWKEG-LVGLA--LEVLHDMRNKGCKP-NVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 357 NALG---GSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
+A G +VG I A+CKE+R EA + E+ G + DV T+++LI
Sbjct: 451 SADGLKPNTVGFNCLI---SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 414 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV--GDPRIEVGT 471
+ + A L RDM V +Y T++ + + ++E+V G P E+
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI-- 565
Query: 472 HDWNSIIHAFCKAGRLEDARRTFRRM------------NFL--------------QFE-- 503
+NS+I C+AG ++ AR F +M N L +F+
Sbjct: 566 -TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 504 -------PNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLY 556
P+ T+ SLING A + + L ++ RKL ++ GI D + +
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF----RKLQAE---GIPPDTVTFNTLMS 677
Query: 557 AMVKGGF-FDAAMQVVE 572
+ KGGF +DA + + E
Sbjct: 678 WLCKGGFVYDACLLLDE 694
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 148/366 (40%), Gaps = 38/366 (10%)
Query: 202 AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVL--MGEFGCSNKKVFYSNL 259
A V M + + P TFG + + A + E + L +L M + GC V Y L
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVV--MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258
Query: 260 ISGYVKSGN----LASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLI 315
I K L +E L + ETF V+ + I A ++
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPD--------AETFNDVILGLCKFDRINEAAKMV 310
Query: 316 NE--AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILK 373
N + P +I + GY ++N +G D A + + + ++ ++
Sbjct: 311 NRMLIRGFAPDDI----TYGY-LMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIH 361
Query: 374 AYCKENRTAEA-TILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVP 432
+ R +A +L ++S G+ DV TY++LI A + DMR
Sbjct: 362 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421
Query: 433 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 492
SY ++ G + + + L+E+ D ++ T +N +I AFCK R+ +A
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG-LKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 493 TFRRMNFLQFEPNDQTYLSLINGYVSAE--KHFNVLMLWNDVKRKLSSDGHKGIKFDHN- 549
FR M +P+ T+ SLI+G + KH LW + R + S+G +N
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKH----ALW--LLRDMISEGVVANTVTYNT 534
Query: 550 LVDAFL 555
L++AFL
Sbjct: 535 LINAFL 540
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 134/322 (41%), Gaps = 13/322 (4%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 238
KP+V + ++G C +L + +A V+ MS G++P+ + F L + + +
Sbjct: 421 KPNVYSYTILVDGFC-KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 298
E+ M GC +++LISG + + L L D + T+ +
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA----LWLLRDMISEGVVANTVTYNTL 535
Query: 299 VKEYLRKGNIKGLANLINEAQ-KLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 357
+ +LR+G IK L+NE + P + NS+ G+ A G DKA S+ ++M
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA----GEVDKARSLFEKML 591
Query: 358 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 417
G + ++ C+ EA E+ G D+ T+++LI + +
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Query: 418 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSI 477
++FR ++ +P ++ T+M+ L + LDE + D + W+ +
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP-NHRTWSIL 710
Query: 478 IHAFCKAGRLEDARRTFRRMNF 499
+ + L+ RR F F
Sbjct: 711 LQSIIPQETLD--RRRFYNAAF 730
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 174/401 (43%), Gaps = 54/401 (13%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 238
KP + NA + G C V+DA ++ M G +P+E+T+G + + G
Sbjct: 174 KPTLITLNALVNGLCLN-GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS-------ME-----------STILRSL 280
EL M E V YS +I G K G+L + ME +T++R
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 281 SDEDRKDWNFGGE---------------TFCAVVKEYLRKGNIKGLANLINEAQKLEPSN 325
R W+ G + F A++ ++++G ++ EA++L
Sbjct: 293 CYAGR--WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR-------EAEELHKEM 343
Query: 326 IK---ADNSIGY-GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRT 381
I+ + +++ Y +++ DKA+ +LD M + G + + ++ YCK N
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 382 AEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLT 440
+ L ++S G+ D TY+ LI+ + A LF++M RV PD+ SY
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV-SYKI 462
Query: 441 IMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFL 500
++ GL +N PE A + E + ++E+ +N IIH C A +++DA F +
Sbjct: 463 LLDGLCDNGEPE-KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 501 QFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGH 541
+P+ +TY +I G +L+ RK+ DGH
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLF----RKMEEDGH 558
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 144/334 (43%), Gaps = 16/334 (4%)
Query: 192 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 251
CCC ++ A +G + LG PD +TF L ++G + EL M E G
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 252 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 311
+ + L++G +G ++ I R + + T+ V+K + G
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVE----TGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 312 ANLINEAQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDEMNALGGSVGLGVYIP 370
L+ +K+E IK D ++ Y I+ + G D A ++ +EM G + +Y
Sbjct: 232 MELL---RKMEERKIKLD-AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 371 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 430
+++ +C R + L+ ++ + DV + ALI+ + + A L ++M +
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 431 VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGTHDWNSIIHAFCKAGRL 487
+ +Y +++ G + ++ + LD +V P I +N +I+ +CKA +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT----FNILINGYCKANLI 403
Query: 488 EDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 521
+D FR+M+ + TY +LI G+ K
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 118/276 (42%), Gaps = 31/276 (11%)
Query: 160 LVRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDEL 219
L+R M K ++ PDV A +A ++ C + + +AE + M G+ PD +
Sbjct: 304 LLRDMIKRKIT---------PDVVAFSALID-CFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 220 TFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRS 279
T+ L + + +K N + LM GC ++ LI+GY K+ NL + R
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA-NLIDDGLELFRK 412
Query: 280 LSDE----DRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIG 333
+S D +N + FC + G ++ L E ++++ P + +
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCEL-------GKLEVAKELFQEMVSRRVRP------DIVS 459
Query: 334 YGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEIS 392
Y I ++ G +KA I +++ + +G+Y I+ C ++ +A L +
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 393 SSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE 428
G++ DV+TY+ +I A LFR M E
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 193/449 (42%), Gaps = 58/449 (12%)
Query: 169 VALDEKLEFMK--PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY 226
VAL +++ MK PD+ + + G C + V++A ++ M G +PDE+T+G +
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLK-GRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 227 LYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS-------ME------ 273
G +L M E V YS +I K G+ ME
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 274 -----STILRSLSDEDRKDWNFGGE---------------TFCAVVKEYLRKGNIKGLAN 313
S+++ L ++ + W+ G + TF A++ ++++G +
Sbjct: 279 DVVTYSSLIGGLCNDGK--WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 336
Query: 314 LINE--AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 371
L NE + + P I ++ I C+ +A+ + D M + G + Y +
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLH-----EANQMFDLMVSKGCEPDIVTYSIL 391
Query: 372 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 431
+ +YCK R + L EISS GL + TY+ L+ S +A LF++M V
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 432 PDLKGSYLTIMTGLMENHRPELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 490
P +Y ++ GL +N EL A + E + R+ +G +N IIH C A +++DA
Sbjct: 452 PPSVVTYGILLDGLCDNG--ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509
Query: 491 RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNL 550
F ++ +P+ TY +I G ML+ RK+ DG F +N+
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF----RKMKEDGCTPDDFTYNI 565
Query: 551 VDAFLYAMVKGGFFDAAMQVVEKSHEMKI 579
+ + A + G ++++++E EMK+
Sbjct: 566 L---IRAHLGGSGLISSVELIE---EMKV 588
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 164/394 (41%), Gaps = 27/394 (6%)
Query: 192 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 251
C C + + A V+G LG PD +TF L + ++G + L M E
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 252 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE--TFCAVVKEYLRKGNIK 309
V S LI+G G ++ I R + ++ F + T+ V+ + GN
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMV------EYGFQPDEVTYGPVLNRLCKSGN-S 226
Query: 310 GLANLINEAQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDEMNALGGSVGLGVY 368
LA ++ +K+E NIKA + + Y IV ++ G D A S+ +EM G + Y
Sbjct: 227 ALA--LDLFRKMEERNIKA-SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 369 IPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE 428
++ C + + + ++ E+ + DV T+ ALI+ + A L+ +M
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 429 ARVPDLKGSYLTIMTGLMEN---HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAG 485
+ +Y +++ G + H M + +P I ++ +I+++CKA
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT----YSILINSYCKAK 399
Query: 486 RLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIK 545
R++D R FR ++ PN TY +L+ G+ + K N K +G+
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK-------LNAAKELFQEMVSRGVP 452
Query: 546 FDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKI 579
L + G + A+++ EK + ++
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 169/420 (40%), Gaps = 58/420 (13%)
Query: 205 VVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYV 264
V + G P +T+G L LY G K E+ +M E G + YS +I+G+V
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 265 KSGNLASMESTILRSLSDEDRKD---WNFGGETFCAVVKEYLRKGNIKGLANLINEAQKL 321
K + A+ + + + + D +N FC + GN+ + E QKL
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGM-------GNMDRAIQTVKEMQKL 583
Query: 322 E--PSNIKADNSI-GY-----------------------------GIVNACVSMGLSDKA 349
P+ I GY G++N V +KA
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 350 HSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIET 409
ILDEM G S Y I++ Y T +A + + GL +D+ TY+AL++
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703
Query: 410 SMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELM-AAFLDEVVGDPRIE 468
S QSA ++ ++M +P Y ++ G R ++ AA L + + ++
Sbjct: 704 CCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA--RRGDVWEAADLIQQMKKEGVK 761
Query: 469 VGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLML 528
H + S I A KAG + A +T M L +PN +TY +LI G+ A L
Sbjct: 762 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 821
Query: 529 WNDVKRKLSSDGHKGIKFD----HNLVDAFL--YAMVKGGFFDAAMQVVEKSHEMKIFVD 582
+ ++K GIK D H L+ + L ++ + + M + ++ E + VD
Sbjct: 822 YEEMKA-------MGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVD 874
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/326 (18%), Positives = 134/326 (41%), Gaps = 43/326 (13%)
Query: 209 MSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGN 268
M G+ P + L + YAV ++ M E G V YS ++ G+ K+G+
Sbjct: 335 MRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGH 394
Query: 269 LASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKA 328
+ + + R + ++ + + N++ L+ E +E I A
Sbjct: 395 AEAADYW----FDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVRE---MEEEGIDA 447
Query: 329 DNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILV 388
+I + +++ + K + + G + + Y ++ Y K + ++A +
Sbjct: 448 PIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVS 507
Query: 389 MEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMEN 448
+ G++ +++TY +I + +D+ +AF++F DM + E
Sbjct: 508 RVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM------------------VKEG 549
Query: 449 HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 508
+P+++ +N+II AFC G ++ A +T + M L+ P +T
Sbjct: 550 MKPDVIL------------------YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 509 YLSLINGYVSAEKHFNVLMLWNDVKR 534
++ +I+GY + L +++ ++R
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRR 617
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 117/287 (40%), Gaps = 17/287 (5%)
Query: 295 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 354
F +VK Y R+G++ +++ I + I +++A D+A S +
Sbjct: 312 FGLMVKFYGRRGDMHRARETF---ERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVR 368
Query: 355 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 414
+M G + L Y I+ + K A E L+ Y +I +
Sbjct: 369 KMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC 428
Query: 415 DFQSAFSLFRDMREARVPDLKGSYLTIMTG---LMENHRPELMAAFLDEVVGDPRIEVGT 471
+ + A +L R+M E + Y T+M G + + + ++ L E P +
Sbjct: 429 NMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT-- 486
Query: 472 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 531
+ +I+ + K G++ A R M + N +TY +ING+V + N ++ D
Sbjct: 487 --YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 532 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMK 578
+ + +G+K D L + + A G D A+Q V++ +++
Sbjct: 545 MVK-------EGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 175/402 (43%), Gaps = 29/402 (7%)
Query: 192 CCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVL---MGE 246
C C ++ A ++G M LG P +T L G+ + +I+E L M E
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG-----NRISEAVALVDQMVE 163
Query: 247 FGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKG 306
G V ++ L+ G + + + + R + + D T+ AV+ ++G
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL----VTYGAVINGLCKRG 219
Query: 307 NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 366
NL+N K+E I+AD I ++++ D A ++ EM+ G +
Sbjct: 220 EPDLALNLLN---KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 367 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 426
Y ++ C R ++A+ L+ ++ + +V T+++LI+ A LF +M
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 427 REARVPDLKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAG 485
+ + +Y +++ G M + E F V D +V T +N++I+ FCKA
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT--YNTLINGFCKAK 394
Query: 486 RLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG-HKGI 544
++ D FR M+ N TY +LI+G+ A N M++ +++ SDG H I
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF----KQMVSDGVHPNI 450
Query: 545 KFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 586
+ L+D + K G + AM V E + K+ D + Y
Sbjct: 451 MTYNTLLD----GLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 151/376 (40%), Gaps = 42/376 (11%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY-LYAVKGLQEKIN 238
P + N+ L G C +++A +V M +G +PD +TF L + L+ E +
Sbjct: 133 PSIVTLNSLLNGFC-HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSGN-------LASME-----------STILRSL 280
+E ++ + GC V Y +I+G K G L ME ST++ SL
Sbjct: 192 LVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 281 -------------SDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA--QKLEPSN 325
++ D K T+ +++ G + L+++ +K+ P N
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP-N 309
Query: 326 IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 385
+ NS+ ++A G +A + DEM + Y ++ +C +R EA
Sbjct: 310 VVTFNSL----IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 386 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 445
+ + S DV TY+ LI ++ LFRDM + +Y T++ G
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 446 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 505
+ + ++V D + +N+++ CK G+LE A F + + EP+
Sbjct: 426 FQASDCDNAQMVFKQMVSDG-VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 506 DQTYLSLINGYVSAEK 521
TY + G A K
Sbjct: 485 IYTYNIMSEGMCKAGK 500
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 128/324 (39%), Gaps = 45/324 (13%)
Query: 194 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 253
C+ V DA + M N G+RPD T
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFT--------------------------------- 277
Query: 254 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 313
YS+LIS G + R LSD + N TF +++ + ++G +
Sbjct: 278 --YSSLISCLCNYGRWSDAS----RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 314 LINEA-QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPIL 372
L +E Q+ NI NS+ +N D+A I M + + Y ++
Sbjct: 332 LFDEMIQRSIDPNIVTYNSL----INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 373 KAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVP 432
+CK + + L ++S GL + TY LI + D +A +F+ M V
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 433 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 492
+Y T++ GL +N + E A + E + ++E + +N + CKAG++ED
Sbjct: 448 PNIMTYNTLLDGLCKNGKLE-KAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 493 TFRRMNFLQFEPNDQTYLSLINGY 516
F ++ +P+ Y ++I+G+
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGF 530
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 158/390 (40%), Gaps = 60/390 (15%)
Query: 80 TDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMER--NPMVLE 137
D+A F + + P +SLI+ L + G + R + ++ER NP V+
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD---MLERKINPNVV- 311
Query: 138 SETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLE-FMKPDVAACNAALEGCCCEL 196
T ++++D AFA + + DE ++ + P++ N+ + G C
Sbjct: 312 --TFNSLID----------AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH- 358
Query: 197 ESVTDAERVVGTMSNLGVRPDELTF-----GFLGYLYAVKGLQEKINELEVLMGEFGCSN 251
+ + +A+++ M + PD +T+ GF V G+ EL M G
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM-----ELFRDMSRRGLVG 413
Query: 252 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKD---WNFGGETFCA--------VVK 300
V Y+ LI G+ ++ + + + + +SD + +N + C VV
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 473
Query: 301 EYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALG 360
EYL+K K+EP +I N + G+ A G + + ++ G
Sbjct: 474 EYLQK-------------SKMEP-DIYTYNIMSEGMCKA----GKVEDGWDLFCSLSLKG 515
Query: 361 GSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAF 420
+ Y ++ +CK+ EA L +++ G D TY+ LI + D ++
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 575
Query: 421 SLFRDMREARVPDLKGSYLTIMTGLMENHR 450
L ++MR R +Y ++T ++ + R
Sbjct: 576 ELIKEMRSCRFAGDASTY-GLVTDMLHDGR 604
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 149/360 (41%), Gaps = 45/360 (12%)
Query: 192 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 251
C C ++ A V+G M LG P +TFG L + + + L +LM + G
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 252 KKVFYSNLISGYVKSGNLA-------SME-----------STIL-------------RSL 280
V Y+ LI G K+G L ME +T+L R L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 281 SDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKAD---NSIGY-GI 336
D ++ N TF A++ ++++GN+ +EAQ+L I++ N++ Y I
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNL-------DEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 337 VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGL 396
+N G A D M + G + Y ++ +CK E L +S G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 397 QLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMA 455
D+ TY+ LI + A +F M RV PD+ ++ ++ GL N E
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDII-THCILLHGLCVNGEIESAL 406
Query: 456 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 515
D++ + +G +N +IH CKA ++E A F R+ +P+ +TY +I G
Sbjct: 407 VKFDDMRESEKY-IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 123/298 (41%), Gaps = 11/298 (3%)
Query: 306 GNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGL 365
N++ +I +QK+E I D +++ A S+L +M LG +
Sbjct: 82 ANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSI 141
Query: 366 GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 425
+ +L +C NR +A LV+ + SG + +V Y+ LI+ + + A L +
Sbjct: 142 VTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNE 201
Query: 426 MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAG 485
M + + +Y T++TGL + R A L +++ I + ++I F K G
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM-KRSINPDVVTFTALIDVFVKQG 260
Query: 486 RLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIK 545
L++A+ ++ M +PN+ TY S+ING + + D K+ KG
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY-------DAKKTFDLMASKGCF 313
Query: 546 FDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKLKVAKLR 603
+ + + K D M++ ++ D + Y H +V KLR
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI---HGYCQVGKLR 368
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 169/408 (41%), Gaps = 48/408 (11%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 238
KPD+ N + G C + +A ++ M G +P+ +T+G + + G
Sbjct: 190 KPDLITINTLVNGLCLSGKE-AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNL------------ASMESTIL--------- 277
EL M E V YS +I G K G+L + + I+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 278 ----------RSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 327
+ L D ++ N TF ++ ++++G ++ EA++L I
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR-------EAEELHKEMIH 361
Query: 328 ---ADNSIGY-GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 383
A ++I Y +++ DKA+ ++D M + G + + ++ YCK NR +
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 384 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 443
L ++S G+ D TY+ LI+ A LF++M +VP +Y ++
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 444 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFE 503
GL +N E A + E + ++E+ +N IIH C A +++DA F + +
Sbjct: 482 GLCDNGESE-KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 504 PNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLV 551
P +TY +I G +L+ RK+ DGH + +N++
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLF----RKMEEDGHAPDGWTYNIL 584
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 144/338 (42%), Gaps = 24/338 (7%)
Query: 192 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 251
C C + A +G + LG P+ +TF L ++G + EL M E G
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 252 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE----TFCAVVKEYLRKGN 307
+ + L++G SG A E+ +L K +G + T+ V+ + G
Sbjct: 192 DLITINTLVNGLCLSGKEA--EAMLLID------KMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 308 IKGLANLINEAQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDEMNALGGSVGLG 366
L+ +K+E NIK D ++ Y I+ + G D A ++ +EM G + +
Sbjct: 244 TALAMELL---RKMEERNIKLD-AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 367 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 426
Y ++ +C R + L+ ++ + +V T+ LI++ + + A L ++M
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 427 REARVPDLKGSYLTIMTGLM-ENH--RPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCK 483
+ +Y +++ G ENH + M + DP I +N +I+ +CK
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT----FNILINGYCK 415
Query: 484 AGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 521
A R++D FR+M+ + TY +LI G+ K
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 165/385 (42%), Gaps = 29/385 (7%)
Query: 194 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 253
C++ A ++ M ++PD + + + G L M E G +
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 254 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 313
Y+ +I G+ G + + R L D ++ N TF A++ +++G +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQ----RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 314 LINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 371
L +E + + P + NS+ YG C D H M L S + + I
Sbjct: 388 LCDEMLHRCIFPDTVTY-NSMIYGF---CKHNRFDDAKH-----MFDLMASPDVVTFNTI 438
Query: 372 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 431
+ YC+ R E L+ EIS GL + TY+ LI + +A LF++M V
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 432 -PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 490
PD + ++ G EN + E A L EV+ +I++ T +N IIH CK ++++A
Sbjct: 499 CPDTITCNI-LLYGFCENEKLE-EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 491 RRTFRRMNFLQFEPNDQTYLSLINGYV--SAEKHFNVLMLWNDVKRKLSSDGHKGIKFDH 548
F + EP+ QTY +I+G+ SA NVL K+ +GH+ D+
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF------HKMKDNGHEP---DN 607
Query: 549 NLVDAFLYAMVKGGFFDAAMQVVEK 573
+ + + +K G D +++++ +
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISE 632
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 177/413 (42%), Gaps = 40/413 (9%)
Query: 192 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMG------ 245
C C+ ++ + G ++ LG +PD +TF L L+ + L+++I+E L G
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL--LHGL-CLEDRISEALALFGYMVETG 206
Query: 246 ------------EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 293
E G + + ++ LI+G G + + + + + K +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG----KGLHIDVV 262
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 353
T+ +V + G+ K NL++ K+E ++IK D I I++ G A +
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLS---KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
EM G + + Y ++ +C R ++A L+ ++ + DV T++ALI S+
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 414 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 473
A L +M + +Y +++ G +++R + D ++ P +
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD-LMASPDVVT---- 434
Query: 474 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 533
+N+II +C+A R+++ + R ++ N TY +LI+G+ + L D+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN----LNAAQDLF 490
Query: 534 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 586
+++ S G+ D + LY + + A+++ E KI +D Y
Sbjct: 491 QEMIS---HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 165/385 (42%), Gaps = 29/385 (7%)
Query: 194 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 253
C++ A ++ M ++PD + + + G L M E G +
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 254 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 313
Y+ +I G+ G + + R L D ++ N TF A++ +++G +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQ----RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 314 LINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 371
L +E + + P + NS+ YG C D H M L S + + I
Sbjct: 388 LCDEMLHRCIFPDTVTY-NSMIYGF---CKHNRFDDAKH-----MFDLMASPDVVTFNTI 438
Query: 372 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 431
+ YC+ R E L+ EIS GL + TY+ LI + +A LF++M V
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 432 -PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 490
PD + ++ G EN + E A L EV+ +I++ T +N IIH CK ++++A
Sbjct: 499 CPDTITCNI-LLYGFCENEKLE-EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 491 RRTFRRMNFLQFEPNDQTYLSLINGYV--SAEKHFNVLMLWNDVKRKLSSDGHKGIKFDH 548
F + EP+ QTY +I+G+ SA NVL K+ +GH+ D+
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF------HKMKDNGHEP---DN 607
Query: 549 NLVDAFLYAMVKGGFFDAAMQVVEK 573
+ + + +K G D +++++ +
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISE 632
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 177/413 (42%), Gaps = 40/413 (9%)
Query: 192 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMG------ 245
C C+ ++ + G ++ LG +PD +TF L L+ + L+++I+E L G
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL--LHGL-CLEDRISEALALFGYMVETG 206
Query: 246 ------------EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 293
E G + + ++ LI+G G + + + + + K +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG----KGLHIDVV 262
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 353
T+ +V + G+ K NL++ K+E ++IK D I I++ G A +
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLS---KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
EM G + + Y ++ +C R ++A L+ ++ + DV T++ALI S+
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 414 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 473
A L +M + +Y +++ G +++R + D ++ P +
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD-LMASPDVVT---- 434
Query: 474 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 533
+N+II +C+A R+++ + R ++ N TY +LI+G+ + L D+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN----LNAAQDLF 490
Query: 534 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 586
+++ S G+ D + LY + + A+++ E KI +D Y
Sbjct: 491 QEMIS---HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 160/342 (46%), Gaps = 21/342 (6%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 237
++PD+ ++ + G C S+ DA V G M +G++ D + L L +
Sbjct: 9 IEPDIVTASSLVNGFCLS-NSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLV--V 65
Query: 238 NELEVL--MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 295
LEVL M + G S V YS+LI+G KSG LA E R L + D K N TF
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAE----RRLHEMDSKKINPNVITF 121
Query: 296 CAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 353
A++ Y ++G + + ++ ++P N+ +S+ YG+ C+ + D+A +L
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDP-NVFTYSSLIYGL---CMHNRV-DEAIKML 176
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
D M + G + + Y + + K +R + L+ ++ G+ + + + LI+ +
Sbjct: 177 DLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQA 236
Query: 414 QDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPE-LMAAFLDEVVGDPRIEVGT 471
A +F M +P+++ SY ++ GL N E ++ F E + R ++
Sbjct: 237 GKIDLALGVFGYMTSNGLIPNIR-SYNIVLAGLFANGEVEKALSRF--EHMQKTRNDLDI 293
Query: 472 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
+ +IH CKA +++A F ++ F + EP+ + Y +I
Sbjct: 294 ITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 21/322 (6%)
Query: 199 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 258
+ D ER++ MS G+ PD LT L ++Y+ G E+ E + +G + Y
Sbjct: 400 IEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEA 459
Query: 259 LISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA 318
+I GYV +G E R + + K+ E + A+++ Y + G+ G A + +
Sbjct: 460 MILGYVNAGKPKLGE----RLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSM 515
Query: 319 QKLEPSNIKADNSIGYG----IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKA 374
Q +D + + V A G DKA S DEM LG +++A
Sbjct: 516 Q------YASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRA 569
Query: 375 YCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF---RDMREARV 431
Y EN +A L++++ G+++ V TY L++ + + A L + EA
Sbjct: 570 YKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPP 629
Query: 432 PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDAR 491
+L+ S + +G+ N + L A + E D ++G ++++ +I A + G +DAR
Sbjct: 630 FELQVSLCCMYSGV-RNEKKTLQALGVLEAKRD---QMGPNEFDKVISALKRGGFEKDAR 685
Query: 492 RTFRRMNFLQFEPNDQTYLSLI 513
R ++ M +F P+ + + ++
Sbjct: 686 RMYKYMEARKFLPSQRLQMDMV 707
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 150/341 (43%), Gaps = 19/341 (5%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 239
P+V N ++G C +L + D +++ +M+ G+ P+ +++ + +G ++++
Sbjct: 238 PNVVTYNTLIDGYC-KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF 296
Query: 240 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS---MESTILRSLSDEDRKDWNFGGETFC 296
+ M G S +V Y+ LI GY K GN M + +LR T+
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-------HGLTPSVITYT 349
Query: 297 AVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 356
+++ + GN+ +++ + + + +V+ G ++A+ +L EM
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQ---MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 357 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 416
N G S + Y ++ +C + +A ++ ++ GL DV +Y ++ S D
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 417 QSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV--VGDPRIEVGTHDW 474
A + R+M E + +Y +++ G E R + +E+ VG P E +
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF---TY 523
Query: 475 NSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 515
++I+A+C G LE A + M P+ TY LING
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 168/401 (41%), Gaps = 42/401 (10%)
Query: 169 VALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLY 228
V L + FM P V + NA L+ +++ AE V M V P+ T+ L +
Sbjct: 157 VHLAQAHGFM-PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGF 215
Query: 229 AVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVK------------SGNLASMESTI 276
G + L M GC V Y+ LI GY K S L +E +
Sbjct: 216 CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL 275
Query: 277 LR-------------------SLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE 317
+ L++ +R+ ++ T+ ++K Y ++GN + E
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 318 AQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAY 375
+ L PS I + ++++ G ++A LD+M G Y ++ +
Sbjct: 336 MLRHGLTPSVITYTS-----LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 376 CKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDL 434
++ EA ++ E++ +G V TY+ALI + + A ++ DM+E + PD+
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 435 KGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTF 494
SY T+++G ++ + E+V + I+ T ++S+I FC+ R ++A +
Sbjct: 451 V-SYSTVLSGFCRSYDVDEALRVKREMV-EKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 495 RRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 535
M + P++ TY +LIN Y L L N++ K
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 108/496 (21%), Positives = 184/496 (37%), Gaps = 90/496 (18%)
Query: 83 AWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETIH 142
A FK + Q P N LI G+I F ME + T +
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK----METKGCLPNVVTYN 244
Query: 143 AMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCELESVTDA 202
++D F L+R M L+ ++P++ + N + G C E + +
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSM---------ALKGLEPNLISYNVVINGLCRE-GRMKEV 294
Query: 203 ERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISG 262
V+ M+ G DE+T+ L Y +G + + M G + + Y++LI
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 263 YVKSGNLAS----MESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA 318
K+GN+ ++ +R L +R T+ +V + +KG + ++ E
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNER--------TYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 319 QK--LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGS-------------- 362
PS + + ++N G + A ++L++M G S
Sbjct: 407 NDNGFSPSVVTYN-----ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 363 ---------------VGLGV------YIPILKAYCKENRTAEATILVMEISSSGLQLDVE 401
V G+ Y +++ +C++ RT EA L E+ GL D
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 402 TYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPE-----LMA 455
TY ALI D + A L +M E V PD+ +Y ++ GL + R L+
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV-TYSVLINGLNKQSRTREAKRLLLK 580
Query: 456 AFLDEVVGDPRIEVGTHDW------------NSIIHAFCKAGRLEDARRTFRRMNFLQFE 503
F +E V +V H S+I FC G + +A + F M +
Sbjct: 581 LFYEESVPS---DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 504 PNDQTYLSLINGYVSA 519
P+ Y +I+G+ A
Sbjct: 638 PDGTAYNIMIHGHCRA 653
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 199 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG-LQEKINELEVLMGEFGCSNKKVFYS 257
+ +A RV+ M++ G P +T+ L + V G +++ I LE M E G S V YS
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED-MKEKGLSPDVVSYS 454
Query: 258 NLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE 317
++SG+ +S ++ LR + K T+ ++++ + + K +L E
Sbjct: 455 TVLSGFCRSYDV----DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 318 AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 377
++ + D ++NA G +KA + +EM G + Y ++ K
Sbjct: 511 MLRV---GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 378 ENRTAEATILVMEI-SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 436
++RT EA L++++ + DV TY LIE S+ +F+S SL + +
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDV-TYHTLIENC-SNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 437 SYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRR 496
M G +NH+P+ A +N +IH C+AG + A ++
Sbjct: 626 QVFESMLG--KNHKPDGTA------------------YNIMIHGHCRAGDIRKAYTLYKE 665
Query: 497 MNFLQFEPNDQTYLSLI 513
M F + T ++L+
Sbjct: 666 MVKSGFLLHTVTVIALV 682
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 176/389 (45%), Gaps = 25/389 (6%)
Query: 189 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLMGE 246
L C C ++ A ++G M LG P +T L GY + K + + + ++ ++ E
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG-KRISDAVALVDQMV-E 183
Query: 247 FGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKG 306
G + ++ LI G + + + R + + + T+ VV ++G
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL----VTYGVVVNGLCKRG 239
Query: 307 NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 366
+I NL+N K+E + I+A+ I ++++ D A ++ EM G +
Sbjct: 240 DIDLAFNLLN---KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 367 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 426
Y ++ C R ++A+ L+ ++ + +V T++ALI+ + A L+ +M
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 427 REARV-PDLKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKA 484
+ + PD+ +Y +++ G M + E F + D V T +N++I+ FCKA
Sbjct: 357 IKRSIDPDIF-TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT--YNTLINGFCKA 413
Query: 485 GRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG-HKG 543
R+++ FR M+ N TY +LI+G+ A N M++ +++ SDG H
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF----KQMVSDGVHPN 469
Query: 544 IKFDHNLVDAFLYAMVKGGFFDAAMQVVE 572
I + L+D + K G + AM V E
Sbjct: 470 IMTYNTLLD----GLCKNGKLEKAMVVFE 494
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 153/378 (40%), Gaps = 44/378 (11%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEK 236
+P + ++ L G C + ++DA +V M +G RPD +TF L + GL K
Sbjct: 152 EPSIVTLSSLLNGYC-HGKRISDAVALVDQMVEMGYRPDTITFTTL-----IHGLFLHNK 205
Query: 237 INELEVL---MGEFGCSNKKVFYSNLISGYVKSGN-------LASME-----------ST 275
+E L M + GC V Y +++G K G+ L ME ST
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 276 ILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKG---LANLINEAQKLEPSNIKAD--- 329
++ SL +D F + + +R I ++ L N + + S + +D
Sbjct: 266 VIDSLCKYRHEDDAL--NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 330 -----NSIGY-GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 383
N + + +++A V G +A + DEM + Y ++ +C +R E
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 384 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 443
A + + S +V TY+ LI ++ LFR+M + + +Y T++
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 444 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFE 503
G + + ++V D + +N+++ CK G+LE A F + + E
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDG-VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 504 PNDQTYLSLINGYVSAEK 521
P TY +I G A K
Sbjct: 503 PTIYTYNIMIEGMCKAGK 520
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 4/239 (1%)
Query: 278 RSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIV 337
R LSD + N TF A++ ++++G + L +E K +I D ++
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK---RSIDPDIFTYSSLI 372
Query: 338 NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQ 397
N D+A + + M + + Y ++ +CK R E L E+S GL
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 398 LDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAF 457
+ TY LI ++D +A +F+ M V +Y T++ GL +N + E A
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE-KAMV 491
Query: 458 LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
+ E + ++E + +N +I CKAG++ED F ++ +P+ Y ++I+G+
Sbjct: 492 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 158/359 (44%), Gaps = 17/359 (4%)
Query: 181 DVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINEL 240
DV + ++GCC E + + ++ ++ G P+ + + L KG EK +L
Sbjct: 162 DVYSFGILIKGCC-EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 241 EVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVK 300
MG+ G + Y+ LI+G K+G + + ED N T+ V+
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNG--VKKQGFEMYEKMQEDGVFPNL--YTYNCVMN 276
Query: 301 EYLRKGNIKGLANLINEAQKLEPS-NIKADNSIGYGIVNACVSMGLSDKAHSILDEMNAL 359
+ + G K + +E ++ S NI N++ G+ C M L++ A+ ++D+M +
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL---CREMKLNE-ANKVVDQMKSD 332
Query: 360 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSA 419
G + L Y ++ +C + +A L ++ S GL + TY+ L+ D A
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392
Query: 420 FSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAF---LDEVVGDPRIEVGTHDWNS 476
+ ++M E + K +Y ++ + E ++E+ P + H ++
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV----HTYSV 448
Query: 477 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 535
+IH FC G++ +A R F+ M EPN+ Y ++I GY + L L +++ K
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 135/321 (42%), Gaps = 16/321 (4%)
Query: 201 DAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLI 260
D E V M ++P+ TF + G K ++ M +GCS V Y+ LI
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 261 SGYVKSGNLASM--ESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA 318
GY K G M +L+ + + D TF ++ + + N+ G + E
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSP---NLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 319 --QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC 376
Q ++P N+ + NS+ G+ N G +A S+ D+M + G L Y ++ +C
Sbjct: 323 LDQDVKP-NVISYNSLINGLCNG----GKISEAISMRDKMVSAGVQPNLITYNALINGFC 377
Query: 377 KENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLK 435
K + EA + + G Y+ LI+ F+L +M RE VPD+
Sbjct: 378 KNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV- 436
Query: 436 GSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFR 495
G+Y ++ GL N E D++ ++ T ++ ++ +C+ G A +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVT--FHILMEGYCRKGESRKAAMLLK 494
Query: 496 RMNFLQFEPNDQTYLSLINGY 516
M+ + +P TY ++ GY
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGY 515
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 143/321 (44%), Gaps = 23/321 (7%)
Query: 202 AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLIS 261
+E++ M G++PD TF + G+ ++ E M FGC V + +I
Sbjct: 194 SEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMID 253
Query: 262 GYVKSGNLASMESTILRSLSDEDRKD-WNFGGETFCAVVKEYLRKGNIKGLANLINEAQK 320
Y ++GN+ + SL D R + W TF +++ Y GN G N+ E +
Sbjct: 254 AYGRAGNV-----DMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKA 308
Query: 321 LEPSNIKADNSIGYGIVNACVSMGLSDK---AHSILDEMNALGGSVGLGVYIPILKAYCK 377
L +K + I +++ SMG + + A I ++ G + Y +++AY +
Sbjct: 309 L---GVKPNLVIYNRLID---SMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGR 362
Query: 378 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG- 436
+A + E+ GL L V Y+ L+ ++ AF +F+DM+ D
Sbjct: 363 ARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSW 422
Query: 437 SYLTIMTGLMENHR-PELMAAFLD--EVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRT 493
++ +++T + R E AA L E +P + V T S+I + KA +++D RT
Sbjct: 423 TFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLT----SVIQCYGKAKQVDDVVRT 478
Query: 494 FRRMNFLQFEPNDQTYLSLIN 514
F ++ L P+D+ L+N
Sbjct: 479 FDQVLELGITPDDRFCGCLLN 499
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 192/465 (41%), Gaps = 104/465 (22%)
Query: 192 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEKINELEVL---MGE 246
C C A V+G + LG PD TF L +KGL + K++E VL M E
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTL-----IKGLFLEGKVSEAVVLVDRMVE 186
Query: 247 FGCSNKKVFYSNLISGYVKSGN-------LASME-----------STILRSLSDEDRKD- 287
GC V Y+++++G +SG+ L ME STI+ SL + D
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 288 --------------------------------WNFGGE---------------TFCAVVK 300
WN G TF ++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 301 EYLRKGNIKGLANLINE--AQKLEPSNIKADNSI--GYGIVNACVSMGLSDKAHSILDEM 356
++++G ++ L E + + P NI N++ GY C+ LS+ A+++LD M
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISP-NIITYNTLMDGY-----CMQNRLSE-ANNMLDLM 359
Query: 357 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 416
S + + ++K YC R + + IS GL + TY L++ S
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 417 QSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWN 475
+ A LF++M +PD+ +Y ++ GL +N + E A + E + ++++G +
Sbjct: 420 KLAEELFQEMVSHGVLPDVM-TYGILLDGLCDNGKLE-KALEIFEDLQKSKMDLGIVMYT 477
Query: 476 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV--SAEKHFNVLMLWNDVK 533
+II CK G++EDA F + +PN TY +I+G + N+L+
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL------ 531
Query: 534 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMK 578
RK+ DG+ +N + A ++ G A+ +++E EMK
Sbjct: 532 RKMEEDGNAPNDCTYN---TLIRAHLRDGDLTASAKLIE---EMK 570
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 153/372 (41%), Gaps = 22/372 (5%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 238
KP + N + G C V+DA ++ M G +P+E+T+G + + G
Sbjct: 190 KPTLITLNTLVNGLCLN-GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 298
EL M E V YS +I G K G+L ++ + K + T+ +
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSL----DNAFNLFNEMEIKGFKADIITYNTL 304
Query: 299 VKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGI-VNACVSMGLSDKAHSILDE 355
+ + G A L+ + +K+ P N + + + +++ V G +A +L E
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISP------NVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 356 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 415
M G + Y ++ +CKENR EA +V + S G D+ T++ LI +
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 416 FQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWN 475
LFR+M V +Y T++ G ++ + E+ E+V R+ +
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS-RRVRPDIVSYK 477
Query: 476 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 535
++ C G LE A F ++ + E + Y+ +I+G +A K +D
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK-------VDDAWDL 530
Query: 536 LSSDGHKGIKFD 547
S KG+K D
Sbjct: 531 FCSLPLKGVKLD 542
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 142/334 (42%), Gaps = 16/334 (4%)
Query: 192 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 251
C C ++ A +G + LG PD + F L ++ + EL M E G
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 252 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 311
+ + L++G +G ++ I R + + T+ V+ + G
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVE----TGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 312 ANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIP 370
L+ +K+E NIK D ++ Y I++ G D A ++ +EM G + Y
Sbjct: 248 MELL---RKMEERNIKLD-AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 371 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 430
++ +C R + L+ ++ + +V T+ LI++ + + A L ++M +
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 431 VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG---DPRIEVGTHDWNSIIHAFCKAGRL 487
+ +Y +++ G + +R E +D ++ DP I +N +I+ +CKA R+
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI----MTFNILINGYCKANRI 419
Query: 488 EDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 521
+D FR M+ N TY +L+ G+ + K
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 117/293 (39%), Gaps = 17/293 (5%)
Query: 140 TIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCELESV 199
T ++DS A L++ M + +A P+ N+ ++G C E +
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIA---------PNTITYNSLIDGFCKE-NRL 384
Query: 200 TDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNL 259
+A ++V M + G PD +TF L Y + EL M G V Y+ L
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 260 ISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQ 319
+ G+ +SG L + +S R D ++ ++ G ++ +
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDI----VSYKILLDGLCDNGELEKALEIFG--- 497
Query: 320 KLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKEN 379
K+E S ++ D I I++ + D A + + G + Y ++ C+++
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD 557
Query: 380 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVP 432
++A IL +++ G D TY+ LI + D +A L +M+ + P
Sbjct: 558 SLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFP 610
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 145/341 (42%), Gaps = 48/341 (14%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 237
++P V N ++G C + + + DA + M G+RP+ +T
Sbjct: 252 LEPGVLIYNTIIDGLC-KYKHMDDALNLFKEMETKGIRPNVVT----------------- 293
Query: 238 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 297
YS+LIS G + R LSD + N TF A
Sbjct: 294 ------------------YSSLISCLCNYGRWSDAS----RLLSDMIERKINPDVFTFSA 331
Query: 298 VVKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 355
++ ++++G + L +E K ++PS + + ++N D+A + +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS-----LINGFCMHDRLDEAKQMFEF 386
Query: 356 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 415
M + + Y ++K +CK R E + E+S GL + TY+ LI+ + D
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 416 FQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWN 475
A +F++M VP +Y T++ GL +N + E A + E + ++E + +N
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE-KAMVVFEYLQRSKMEPTIYTYN 505
Query: 476 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
+I CKAG++ED F ++ +P+ Y ++I+G+
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 160/399 (40%), Gaps = 41/399 (10%)
Query: 187 AALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLM 244
+ L C C + A V+G M LG P+ +T L GY ++ ++I+E L+
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS-----KRISEAVALV 174
Query: 245 GEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 301
+ G V ++ LI G + + I R ++ + D T+ VV
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL----VTYGVVVNG 230
Query: 302 YLRKGNIKGLANLIN--EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNAL 359
++G+ NL+N E KLEP + I I++ D A ++ EM
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVL-----IYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 360 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSA 419
G + Y ++ C R ++A+ L+ ++ + DV T+ ALI+ + A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 420 FSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH------D 473
L+ +M + + +Y +++ G + R LDE V H
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDR-------LDEAKQMFEFMVSKHCFPDVVT 398
Query: 474 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 533
+N++I FCK R+E+ FR M+ N TY LI G A + ++
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD----CDMAQEIF 454
Query: 534 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 572
+++ SDG +N L + K G + AM V E
Sbjct: 455 KEMVSDGVPPNIMTYN---TLLDGLCKNGKLEKAMVVFE 490
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 151/382 (39%), Gaps = 52/382 (13%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEK 236
+P++ ++ L G C + +++A +V M G +P+ +TF L + GL K
Sbjct: 148 EPNIVTLSSLLNGYC-HSKRISEAVALVDQMFVTGYQPNTVTFNTL-----IHGLFLHNK 201
Query: 237 INELEVLMGEF---GCSNKKVFYSNLISGYVKSGN-------LASME-----------ST 275
+E L+ GC V Y +++G K G+ L ME +T
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 276 ILRSLSDEDRKDWNFGGETFCAVVKEYLRKG---NIKGLANLIN---------EAQKLEP 323
I+ L D + KE KG N+ ++LI+ +A +L
Sbjct: 262 IIDGLCKYKHMDDALN------LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 324 S----NIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKEN 379
I D +++A V G +A + DEM + Y ++ +C +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 380 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYL 439
R EA + + S DV TY+ LI+ + + +FR+M + + +Y
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 440 TIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNF 499
++ GL + ++ E+V D + +N+++ CK G+LE A F +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 500 LQFEPNDQTYLSLINGYVSAEK 521
+ EP TY +I G A K
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGK 516
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 132/348 (37%), Gaps = 68/348 (19%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 237
++P+V ++L C C +DA R++ M + PD TF L + +G K+
Sbjct: 287 IRPNVVT-YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG---KL 342
Query: 238 NELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE---DRKDWNFG 291
E E L E V YS+LI+G+ L + +S D +N
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 292 GETFCAVVK-----EYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGI-VNACVSMGL 345
+ FC + E R+ + +GL N++ Y I + G
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVG----------------NTVTYNILIQGLFQAGD 446
Query: 346 SDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDA 405
D A I EM + G + Y +L CK + +A ++ + S ++ + TY+
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 406 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 465
+IE + + + LF ++ LKG +P+++A
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNL------SLKGV------------KPDVVA---------- 538
Query: 466 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
+N++I FC+ G E+A F+ M PN Y +LI
Sbjct: 539 --------YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 11/247 (4%)
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKL--EPSNIKADNSIGYGIVNACVSMGLSDKAHS 351
T+ ++ + R+ + ++ + KL EP NI +S+ G C S +S+ A +
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEP-NIVTLSSLLNGY---CHSKRISE-AVA 172
Query: 352 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 411
++D+M G + ++ N+ +EA L+ + + G Q D+ TY ++
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232
Query: 412 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLME-NHRPELMAAFLDEVVGDPRIEVG 470
D AF+L M + ++ Y TI+ GL + H + + F + R V
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
Query: 471 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWN 530
T ++S+I C GR DA R M + P+ T+ +LI+ +V K L++
Sbjct: 293 T--YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 531 D-VKRKL 536
+ VKR +
Sbjct: 351 EMVKRSI 357
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 152/357 (42%), Gaps = 55/357 (15%)
Query: 232 GLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFG 291
GL +++ ++ + M E Y+ +++GY K GN+ + + + E D +F
Sbjct: 197 GLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV--EAGLDPDFF 254
Query: 292 GETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG--IVNACVSMGLSDKA 349
T+ +++ Y ++ ++ + NE P N + Y I CV+ + D+A
Sbjct: 255 --TYTSLIMGYCQRKDLDSAFKVFNEM----PLKGCRRNEVAYTHLIHGLCVARRI-DEA 307
Query: 350 HSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIET 409
+ +M + Y ++K+ C R +EA LV E+ +G++ ++ TY LI++
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 410 SMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEV 469
S F+ A L M E GLM N
Sbjct: 368 LCSQCKFEKARELLGQMLEK--------------GLMPN--------------------- 392
Query: 470 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 529
+N++I+ +CK G +EDA M + PN +TY LI GY + H + +L
Sbjct: 393 -VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLN 451
Query: 530 NDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 586
++RK+ D + ++L+D + G FD+A +++ ++ + D+W Y
Sbjct: 452 KMLERKVLPD----VVTYNSLID----GQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 159/363 (43%), Gaps = 30/363 (8%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTF-GFLGYLYAVKGLQEKIN 238
PDV N+ ++G C + A R++ M++ G+ PD+ T+ + L K ++E +
Sbjct: 460 PDVVTYNSLIDGQC-RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 298
+ L + G + V Y+ LI GY K+G + + + LS K+ TF A+
Sbjct: 519 LFDSL-EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS----KNCLPNSLTFNAL 573
Query: 299 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 358
+ G +K A L+ E K+ ++ S +++ + G D A+S +M +
Sbjct: 574 IHGLCADGKLKE-ATLLEE--KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS 630
Query: 359 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 418
G Y ++ YC+E R +A ++ ++ +G+ D+ TY +LI+
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690
Query: 419 AFSLFRDMREARVPDLKGSYLTIMTGLME-------NHRPELMA-----------AFLDE 460
AF + + MR+ + ++L+++ L+E PEL A L++
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 461 VVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQ-FEPNDQTYLSLINGYVSA 519
+V + + + +I C+ G L A + F M + P++ + +L++
Sbjct: 751 MV-EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 520 EKH 522
+KH
Sbjct: 810 KKH 812
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 157/376 (41%), Gaps = 43/376 (11%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 239
P++ N + G C +L +V +A + V + G+ PD T+ L Y + + +
Sbjct: 216 PNIYTYNKMVNGYC-KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK 274
Query: 240 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE---DRKDWNFGGETFC 296
+ M GC +V Y++LI G + + ++ DE + + ++ C
Sbjct: 275 VFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 297 A---------VVKEYLRKG---NIKGLANLINE--------------AQKLEPSNIKADN 330
+VKE G NI LI+ Q LE + N
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP--N 392
Query: 331 SIGY-GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVM 389
I Y ++N G+ + A +++ M + S Y ++K YCK N +L
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNK 452
Query: 390 EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMEN 448
+ L DV TY++LI+ S +F SA+ L M + VPD + +Y +++ L ++
Sbjct: 453 MLERKVLP-DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD-QWTYTSMIDSLCKS 510
Query: 449 HRPELMAAFLDEVVG---DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 505
R E D + +P + + + ++I +CKAG++++A +M PN
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVM----YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 506 DQTYLSLINGYVSAEK 521
T+ +LI+G + K
Sbjct: 567 SLTFNALIHGLCADGK 582
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 139/366 (37%), Gaps = 60/366 (16%)
Query: 194 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 253
C E ++A +V M G++P+ T+ L + EK EL M E G
Sbjct: 334 CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 254 VFYSNLISGYVKSGNLAS-------MESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKG 306
+ Y+ LI+GY K G + MES R LS R T+ ++K Y K
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMES---RKLSPNTR--------TYNELIKGYC-KS 441
Query: 307 NIKGLANLINE--AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVG 364
N+ ++N+ +K+ P ++ NS+ I C S G D A+ +L MN G
Sbjct: 442 NVHKAMGVLNKMLERKVLP-DVVTYNSL---IDGQCRS-GNFDSAYRLLSLMNDRGLVPD 496
Query: 365 LGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFR 424
Y ++ + CK R EA L + G+ +V Y ALI+ + A +
Sbjct: 497 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 425 DMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG---DPRIEVGT---------- 471
M ++ ++ GL + + + +++V P + T
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 472 ---------------------HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYL 510
H + + I +C+ GRL DA +M P+ TY
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 511 SLINGY 516
SLI GY
Sbjct: 677 SLIKGY 682
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 156/389 (40%), Gaps = 68/389 (17%)
Query: 178 MKPDVAACNAALEGCCCELES--VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG-LQ 234
+KP++ CN L G S ++ A V M +GV + TF L Y ++G L+
Sbjct: 162 LKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLE 221
Query: 235 EKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSD---EDRKDWNFG 291
+ + LE ++ EF + V Y+ ++ K G L+ ++ +L + +R +N
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281
Query: 292 GETFCAV--------VKEYLRKGN-----------IKGLANLINEAQKLEPSN------I 326
+C + + E +++ N I GL N + + LE + +
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKL 341
Query: 327 KADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 386
+ D +++ C +GLS +A ++++M G + LK CKE + T
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTR 401
Query: 387 LVME-ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 445
V E + G D+ TY LI+ + D A + R+M
Sbjct: 402 KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM------------------- 442
Query: 446 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 505
G I++ T N+I+ A CK +L++A + F +
Sbjct: 443 -----------------GQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 485
Query: 506 DQTYLSLINGYVSAEKHFNVLMLWNDVKR 534
+ TY +LI G+ EK L +W+++K+
Sbjct: 486 EVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 184/425 (43%), Gaps = 36/425 (8%)
Query: 97 PPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETIHAMLDSMKGANTAAP 156
P + N+L+ LG +LK AF V LM++ ++ + T + +++ + A +
Sbjct: 273 PNRVTYNNLVYGYCKLG---SLKEAF-QIVELMKQTNVLPDLCTYNILINGLCNAGSMRE 328
Query: 157 AFALVRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRP 216
L+ M + ++PDV N ++GC EL +A +++ M N GV+
Sbjct: 329 GLELMDAMKSLK---------LQPDVVTYNTLIDGCF-ELGLSLEARKLMEQMENDGVKA 378
Query: 217 DELTFGF-LGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMEST 275
+++T L +L + + +++ L+ G S V Y LI Y+K G+L S
Sbjct: 379 NQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL----SG 434
Query: 276 ILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG 335
L + + +K T ++ ++ + NL+N A K D + YG
Sbjct: 435 ALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHK---RGFIVD-EVTYG 490
Query: 336 IVNACVSMGL-----SDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVME 390
+ MG +KA + DEM + + + + ++ C +T A E
Sbjct: 491 TL----IMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 391 ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD-MREARVPDLKGSYLTIMTGLMENH 449
++ SGL D T++++I + AF + + ++ + PD + ++ GL +
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD-NYTCNILLNGLCKEG 605
Query: 450 RPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 509
E F + ++ + EV T +N++I AFCK +L++A M EP+ TY
Sbjct: 606 MTEKALNFFNTLIEER--EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY 663
Query: 510 LSLIN 514
S I+
Sbjct: 664 NSFIS 668
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 143/350 (40%), Gaps = 18/350 (5%)
Query: 171 LDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAV 230
LD K + P+ N + G C +L S+ +A ++V M V PD T+ L
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYC-KLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCN 322
Query: 231 KGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDED-----R 285
G + EL M V Y+ LI G + G S+E+ L + D +
Sbjct: 323 AGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELG--LSLEARKLMEQMENDGVKANQ 380
Query: 286 KDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGL 345
N + C KE R+ + + L++ D + ++ A + +G
Sbjct: 381 VTHNISLKWLC---KEEKREAVTRKVKELVDM------HGFSPDIVTYHTLIKAYLKVGD 431
Query: 346 SDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDA 405
A ++ EM G + IL A CKE + EA L+ G +D TY
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 406 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 465
LI + + A ++ +M++ ++ ++ +++ GL + + EL DE + +
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE-LAES 550
Query: 466 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 515
+ +NSII +CK GR+E A + F+P++ T L+NG
Sbjct: 551 GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 165/415 (39%), Gaps = 36/415 (8%)
Query: 160 LVRCMFKNRVALDEKLE---FMK-----PDVAACNAALEGCCCELESVTDAERVVGTMSN 211
LVRC + R+ +DE +E MK P CN L L + +A M
Sbjct: 161 LVRCCCQLRM-VDEAIECFYLMKEKGFYPKTETCNHILT-LLSRLNRIENAWVFYADMYR 218
Query: 212 LGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS 271
+ ++ + TF + + +G +K +M FG V Y+ L+ G+ G +
Sbjct: 219 MEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEG 278
Query: 272 MESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNS 331
I S+ K + +T+ ++ +G + + E L P +S
Sbjct: 279 ARLII----SEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI-GLVP------DS 327
Query: 332 IGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVME 390
+ Y I + C + G + A + DEM G Y ++ EN+ A IL+ E
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 387
Query: 391 ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHR 450
I G+ LD TY+ LI D + AF+L +M + + +Y +++ L ++
Sbjct: 388 IREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNK 447
Query: 451 PELMAAFLDEVVG---DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQ 507
++VVG P + + N+++ C G ++ A + M+ + P+D
Sbjct: 448 TREADELFEKVVGKGMKPDLVM----MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDV 503
Query: 508 TYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGG 562
TY L+ G K L ++KR +GIK DH + + K G
Sbjct: 504 TYNCLMRGLCGEGKFEEARELMGEMKR-------RGIKPDHISYNTLISGYSKKG 551
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 170/444 (38%), Gaps = 78/444 (17%)
Query: 80 TDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESE 139
DEA + F + +P N ++T LS L I N F + ++ ME V
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIEN-AWVFYADMYRMEIKSNVY--- 226
Query: 140 TIHAMLDSM---------KG----------------ANTAAPAFALVRCMFKNRVALDE- 173
T + M++ + KG NT F+L + R+ + E
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 174 KLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG----------- 222
K + +PD+ N L C E A V+ M +G+ PD +++
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNE----GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 223 -------------------FLGYLYAVKGL--QEKINELEVLMGEF---GCSNKKVFYSN 258
F Y + GL + KI E+L+ E G V Y+
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 259 LISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE-TFCAVVKEYLRKGNIKGLANLINE 317
LI+GY + G+ +L DE D + T+ +++ RK + L
Sbjct: 403 LINGYCQHGDAKKA-----FALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF-- 455
Query: 318 AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 377
+K+ +K D + +++ ++G D+A S+L EM+ + + Y +++ C
Sbjct: 456 -EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCG 514
Query: 378 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGS 437
E + EA L+ E+ G++ D +Y+ LI D + AF + +M +
Sbjct: 515 EGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLT 574
Query: 438 YLTIMTGLMENHRPELMAAFLDEV 461
Y ++ GL +N EL L E+
Sbjct: 575 YNALLKGLSKNQEGELAEELLREM 598
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 137/340 (40%), Gaps = 46/340 (13%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 237
++ DV N ++G C + + + DA + M N G+RPD T
Sbjct: 254 IEADVVIYNTIIDGLC-KYKHMDDALNLFTEMDNKGIRPDVFT----------------- 295
Query: 238 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 297
YS+LIS G + R LSD + N TF A
Sbjct: 296 ------------------YSSLISCLCNYGRWSDAS----RLLSDMIERKINPNVVTFSA 333
Query: 298 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 357
++ ++++G + L +E K +I D ++N D+A + + M
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIK---RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 358 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 417
+ + Y ++K +CK R E L E+S GL + TY LI ++D
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 418 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHR-PELMAAFLDEVVGDPRIEVGTHDWNS 476
+A +F+ M V +Y ++ GL +N + + M F E + +E + +N
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF--EYLQRSTMEPDIYTYNI 508
Query: 477 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
+I CKAG++ED F ++ PN Y ++I+G+
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 170/415 (40%), Gaps = 65/415 (15%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEK 236
+PD+ ++ L G C + ++DA +V M +G +PD TF L + GL K
Sbjct: 150 EPDIVTLSSLLNGYC-HSKRISDAVALVDQMVEMGYKPDTFTFTTL-----IHGLFLHNK 203
Query: 237 INELEVL---MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 293
+E L M + GC V Y +++G K
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK---------------------------- 235
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 353
+G+I +L+ +K+E I+AD I I++ D A ++
Sbjct: 236 -----------RGDIDLALSLL---KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
EM+ G + Y ++ C R ++A+ L+ ++ + +V T+ ALI+ +
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 414 QDFQSAFSLFRDMREARV-PDLKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGT 471
A L+ +M + + PD+ +Y +++ G M + E F + D V T
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIF-TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 472 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 531
++++I FCKA R+E+ FR M+ N TY +LI+G+ A N M++
Sbjct: 401 --YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF-- 456
Query: 532 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 586
K+ +S H I + L+D + K G AM V E + D + Y
Sbjct: 457 -KQMVSVGVHPNILTYNILLD----GLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 115/269 (42%), Gaps = 16/269 (5%)
Query: 254 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 313
V YS+LIS G + LSD K N TF A++ ++++G
Sbjct: 221 VTYSSLISCLCSYGRWSDASQL----LSDMIEKKINPNLVTFNALIDAFVKEGKFV---- 272
Query: 314 LINEAQKLEPSNIK----ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYI 369
EA+KL IK D ++N DKA + + M + L Y
Sbjct: 273 ---EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 329
Query: 370 PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 429
++K +CK R + T L E+S GL D TY LI+ D +A +F+ M
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389
Query: 430 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 489
VP +Y ++ GL N + E D + I++ + + ++I CKAG+++D
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFD-YMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 490 ARRTFRRMNFLQFEPNDQTYLSLINGYVS 518
F ++ +PN TY ++I+G S
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 172/417 (41%), Gaps = 69/417 (16%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG--LQEK 236
+P + ++ L G C + ++DA +V M +G RPD +TF L + G L K
Sbjct: 77 EPSIVTLSSLLNGYC-HGKRISDAVALVDQMVEMGYRPDTITFTTL-----IHGLFLHNK 130
Query: 237 INELEVL---MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 293
+E L M + GC V Y +++G K G++ D F
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI-----------------DLAF--- 170
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 353
NL+N K+E + I+AD I I+++ D A ++
Sbjct: 171 -------------------NLLN---KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
EM G + Y ++ C R ++A+ L+ ++ + ++ T++ALI+ +
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 414 QDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEV 469
F A L DM + + PD+ +Y +++ G + R + + +V P ++
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDI-FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 470 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 529
+N++I FCK+ R+ED FR M+ + TY +LI G N
Sbjct: 328 ----YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA---- 379
Query: 530 NDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 586
V +++ SD G+ D L + G + A++V + + +I +D + Y
Sbjct: 380 QKVFKQMVSD---GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 433
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 18/231 (7%)
Query: 349 AHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 408
A ++L +M LG + +L YC R ++A LV ++ G + D T+ LI
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 409 TSMSSQDFQSAFSLF-RDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRI 467
A +L R ++ P+L +Y ++ GL + +L L+++ +I
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLV-TYGVVVNGLCKRGDIDLAFNLLNKMEA-AKI 181
Query: 468 EVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLM 527
E +N+II + CK ++DA F+ M PN TY SLI+ S +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR------ 235
Query: 528 LWNDVKRKLSSDGHKGIKFDHNLV--DAFLYAMVKGGFFDAAMQVVEKSHE 576
W+D + LS K K + NLV +A + A VK G F A EK H+
Sbjct: 236 -WSDASQLLSDMIEK--KINPNLVTFNALIDAFVKEGKFVEA----EKLHD 279
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 147/384 (38%), Gaps = 32/384 (8%)
Query: 80 TDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMER--NPMVLE 137
D+A FK + + P +SLI+ L S G + + + ++E+ NP ++
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD---MIEKKINPNLV- 256
Query: 138 SETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCELE 197
T +A++D+ A L M K + PD+ N+ + G C +
Sbjct: 257 --TFNALIDAFVKEGKFVEAEKLHDDMIKRSI---------DPDIFTYNSLINGFCMH-D 304
Query: 198 SVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYS 257
+ A+++ M + PD T+ L + E EL M G V Y+
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 258 NLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE 317
LI G G+ + + + +SD D T+ ++ G ++ + +
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI----MTYSILLDGLCNNGKLEKALEVFDY 420
Query: 318 AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 377
QK S IK D I ++ G D + ++ G + Y ++ C
Sbjct: 421 MQK---SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Query: 378 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGS 437
+ EA L+ ++ G D TY+ LI + D ++ L R+MR R G
Sbjct: 478 KRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR---FVGD 534
Query: 438 YLTIMTGLMEN--HRPELMAAFLD 459
TI GL+ N H L +FLD
Sbjct: 535 ASTI--GLVANMLHDGRLDKSFLD 556
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 176/402 (43%), Gaps = 23/402 (5%)
Query: 189 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLMGE 246
L C C ++ A ++G M LG P +T L GY + K + + + ++ ++ E
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG-KRISDAVALVDQMV-E 183
Query: 247 FGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKG 306
G + ++ LI G + + + R + + + T+ VV ++G
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL----VTYGVVVNGLCKRG 239
Query: 307 NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 366
+ NL+N K+E + I+AD I I+++ D A ++ EM G +
Sbjct: 240 DTDLALNLLN---KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 367 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 426
Y ++ C R ++A+ L+ ++ + ++ T++ALI+ + F A L+ DM
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 427 REARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVG-DPRIEVGTHDWNSIIHAFCKA 484
+ + PD+ +Y +++ G + R + + +V D +V T +N++I FCK+
Sbjct: 357 IKRSIDPDIF-TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT--YNTLIKGFCKS 413
Query: 485 GRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGI 544
R+ED FR M+ + TY +LI G N V +++ SD G+
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA----QKVFKQMVSD---GV 466
Query: 545 KFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 586
D L + G + A++V + + +I +D + Y
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 115/269 (42%), Gaps = 16/269 (5%)
Query: 254 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 313
V YS+LIS G + LSD K N TF A++ ++++G
Sbjct: 296 VTYSSLISCLCSYGRWSDASQL----LSDMIEKKINPNLVTFNALIDAFVKEGKFV---- 347
Query: 314 LINEAQKLEPSNIK----ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYI 369
EA+KL IK D +VN DKA + + M + + Y
Sbjct: 348 ---EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 370 PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 429
++K +CK R + T L E+S GL D TY LI+ D +A +F+ M
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Query: 430 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 489
VP +Y ++ GL N + E D + I++ + + ++I CKAG+++D
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFD-YMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 490 ARRTFRRMNFLQFEPNDQTYLSLINGYVS 518
F ++ +PN TY ++I+G S
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCS 552
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 148/384 (38%), Gaps = 32/384 (8%)
Query: 80 TDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMER--NPMVLE 137
D+A FK + + P +SLI+ L S G + + + ++E+ NP ++
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD---MIEKKINPNLV- 331
Query: 138 SETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCELE 197
T +A++D+ A L M K + PD+ N+ + G C +
Sbjct: 332 --TFNALIDAFVKEGKFVEAEKLYDDMIKRSI---------DPDIFTYNSLVNGFCMH-D 379
Query: 198 SVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYS 257
+ A+++ M + PD +T+ L + E EL M G V Y+
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 258 NLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE 317
LI G G+ + + + +SD D T+ ++ G ++ + +
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI----MTYSILLDGLCNNGKLEKALEVFDY 495
Query: 318 AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 377
QK S IK D I ++ G D + ++ G + Y ++ C
Sbjct: 496 MQK---SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552
Query: 378 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGS 437
+ EA L+ ++ G + TY+ LI + D ++ L R+MR R G
Sbjct: 553 KRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR---FVGD 609
Query: 438 YLTIMTGLMEN--HRPELMAAFLD 459
TI GL+ N H L +FLD
Sbjct: 610 ASTI--GLVANMLHDGRLDKSFLD 631
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 156/385 (40%), Gaps = 56/385 (14%)
Query: 143 AMLDSM--KGANTAAPAFALVRCMFKNRVALDEKLEFMK--------PDVAACNAALEGC 192
A++D M KG + +V R +D L +K P V N ++
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 193 CCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNK 252
C ++V DA + M N G+RP+ +T
Sbjct: 267 C-NYKNVNDALNLFTEMDNKGIRPNVVT-------------------------------- 293
Query: 253 KVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLA 312
Y++LI G + R LSD + N TF A++ ++++G +
Sbjct: 294 ---YNSLIRCLCNYGRWSDAS----RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 313 NLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPIL 372
L +E K +I D ++N D+A + + M + + Y ++
Sbjct: 347 KLYDEMIK---RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 373 KAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARV 431
K +CK R E L E+S GL + TY LI +++ +A +F+ M + +
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 432 PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDAR 491
PD+ +Y ++ GL N + E A + E + ++E + +N +I CKAG++ED
Sbjct: 464 PDIM-TYSILLDGLCNNGKVE-TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521
Query: 492 RTFRRMNFLQFEPNDQTYLSLINGY 516
F ++ +PN TY ++++G+
Sbjct: 522 DLFCSLSLKGVKPNVVTYTTMMSGF 546
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 173/415 (41%), Gaps = 65/415 (15%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEK 236
+PD+ N+ L G C ++DA +VG M +G +PD TF L + GL +
Sbjct: 148 EPDIVTLNSLLNGFC-HGNRISDAVSLVGQMVEMGYQPDSFTFNTL-----IHGLFRHNR 201
Query: 237 INELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 293
+E L+ GC V Y +++G K G++ + ++L+ +
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI-DLALSLLKKM------------- 247
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 353
E K+EP + I I++A + + A ++
Sbjct: 248 -----------------------EQGKIEPGVV-----IYNTIIDALCNYKNVNDALNLF 279
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
EM+ G + Y +++ C R ++A+ L+ ++ + +V T+ ALI+ +
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 414 QDFQSAFSLFRDMREARV-PDLKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGT 471
A L+ +M + + PD+ +Y +++ G M + E F + D V T
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIF-TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 472 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 531
+N++I FCKA R+++ FR M+ N TY +LI+G+ A + N +++
Sbjct: 399 --YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF-- 454
Query: 532 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 586
+++ SD G+ D L + G + A+ V E K+ D + Y
Sbjct: 455 --KQMVSD---GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 181/449 (40%), Gaps = 64/449 (14%)
Query: 168 RVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--G 225
RV + K + + PD+ N+ + G + + + +A + M G++P+ T+G G
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLS-KAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 226 YLYAVK--GLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE 283
Y+ A + + + E M E G KV + LI+ Y K G + S RS+ D+
Sbjct: 532 YIEASEFASADKYVKE----MRECGVLPNKVLCTGLINEYCKKGKVIEACSA-YRSMVDQ 586
Query: 284 DRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGI-VNACVS 342
+T+ ++ + + + E + I D YG+ +N
Sbjct: 587 GILG---DAKTYTVLMNGLFKNDKVDDAEEIFRE---MRGKGIAPD-VFSYGVLINGFSK 639
Query: 343 MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVET 402
+G KA SI DEM G + + +Y +L +C+ +A L+ E+S GL + T
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 403 YDALIETSMSSQDFQSAFSLFRDMR-EARVPDLKGSYLTIMTG----------------- 444
Y +I+ S D AF LF +M+ + VPD Y T++ G
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD-SFVYTTLVDGCCRLNDVERAITIFGTN 758
Query: 445 -----------------LMENHRPELMAAFLDEVVGDPRIEVGTHD---WNSIIHAFCKA 484
+ + + EL L+ ++ G + +N +I CK
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 485 GRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGI 544
G LE A+ F +M P TY SL+NGY + + ++++ GI
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI-------AAGI 871
Query: 545 KFDHNLVDAFLYAMVKGGFFDAAMQVVEK 573
+ DH + + A +K G A+ +V++
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKALVLVDQ 900
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 344 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 403
G+ +KA ++ D M A G Y +++ YC+E + L++E+ + + TY
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420
Query: 404 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 463
+++ SS D A+++ ++M + Y T++ ++N R L E +
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE-MK 479
Query: 464 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 521
+ I +NS+I KA R+++AR M +PN TY + I+GY+ A +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 160/385 (41%), Gaps = 50/385 (12%)
Query: 194 CELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLY-----AVKGLQEKINELEVLMGE 246
C+++ + DA+ ++ M +LGV D T+ L G L A KGL + M
Sbjct: 288 CKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE-------MVS 340
Query: 247 FGCSNKKVFYSNLISGYVKSGNL----ASMESTILRSLSDEDRKDWNFGGETFCAVVKEY 302
G + K Y I K G + A + I L + + + ++++ Y
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ--------AQAYASLIEGY 392
Query: 303 LRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGS 362
R+ N++ L+ E +K NI +V S G D A++I+ EM A G
Sbjct: 393 CREKNVRQGYELLVEMKK---RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 363 VGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSL 422
+ +Y ++K + + +R +A ++ E+ G+ D+ Y++LI ++ A S
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 423 FRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD----WNSII 478
+M E + +Y ++G +E E +A D+ V + R E G +I
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIE--ASEFASA--DKYVKEMR-ECGVLPNKVLCTGLI 564
Query: 479 HAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSS 538
+ +CK G++ +A +R M + +TY L+NG +K +D +
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK-------VDDAEEIFRE 617
Query: 539 DGHKGIKFDHNLVDAFLYAMVKGGF 563
KGI D F Y ++ GF
Sbjct: 618 MRGKGIA-----PDVFSYGVLINGF 637
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 17/243 (6%)
Query: 334 YG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEIS 392
YG I+N MG ++ A ++L +M + +Y I+ CK+ A L E+
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 393 SSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRP 451
G+ DV TY +I++ S + A L RDM E ++ PD + + L+
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPD-----VVTFSALINALVK 158
Query: 452 ELMAAFLDEVVGD---PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 508
E + +E+ GD I T +NS+I FCK RL DA+R M P+ T
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVT 218
Query: 509 YLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAM 568
+ +LINGY A++ N + ++ ++ R +GI + ++ + G DAA
Sbjct: 219 FSTLINGYCKAKRVDNGMEIFCEMHR-------RGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 569 QVV 571
++
Sbjct: 272 DLL 274
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 164/397 (41%), Gaps = 23/397 (5%)
Query: 121 AFASAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKP 180
A +F+ME P + T + ++ + N A+ A AL+ M +P
Sbjct: 171 ALVDQMFVMEYQP---NTVTFNTLIHGLFLHNKASEAVALIDRMVARGC---------QP 218
Query: 181 DVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG-FLGYLYAVKGLQEKINE 239
D+ + G C + + A ++ M + D + + + L K + + +N
Sbjct: 219 DLFTYGTVVNGLC-KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN- 276
Query: 240 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 299
L M G V Y++LI G + R LSD + N TF A++
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS----RLLSDMIERKINPNVVTFSALI 332
Query: 300 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNAL 359
++++G + L +E K +I D ++N D+A + + M +
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIK---RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 360 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSA 419
+ Y ++K +CK R E L E+S GL + TY+ LI+ + D A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 420 FSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIH 479
+F+ M VP +Y ++ GL + + E A + E + ++E + +N +I
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE-KALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 480 AFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
CKAG++ED F ++ +PN Y ++I+G+
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 175/405 (43%), Gaps = 29/405 (7%)
Query: 189 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLMGE 246
L C C + A V+G M LG PD +T L GY + ++I+E L+ +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG-----KRISEAVALVDQ 175
Query: 247 FGCSNKK---VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYL 303
+ V ++ LI G + + I R ++ + D T+ VV
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF----TYGTVVNGLC 231
Query: 304 RKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSV 363
++G+I +L+ +K+E I+AD I I++A + + A ++ EM+ G
Sbjct: 232 KRGDIDLALSLL---KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 364 GLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF 423
+ Y +++ C R ++A+ L+ ++ + +V T+ ALI+ + A L+
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 424 RDMREARV-PDLKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAF 481
+M + + PD+ +Y +++ G M + E F + D V T +N++I F
Sbjct: 349 DEMIKRSIDPDI-FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT--YNTLIKGF 405
Query: 482 CKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGH 541
CKA R+E+ FR M+ N TY +LI G A + + +K+ SD
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD----CDMAQKIFKKMVSD-- 459
Query: 542 KGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 586
G+ D L + K G + A+ V E + K+ D + Y
Sbjct: 460 -GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 157/377 (41%), Gaps = 42/377 (11%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY-LYAVKGLQEKI 237
+PD+ ++ L G C + +++A +V M + +P+ +TF L + L+ E +
Sbjct: 147 EPDIVTLSSLLNGYC-HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 238 NELEVLMGEFGCSNKKVFYSNLISGYVKSGN-------LASME-----------STILRS 279
++ ++ GC Y +++G K G+ L ME +TI+ +
Sbjct: 206 ALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 280 L-------------SDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA--QKLEPS 324
L ++ D K T+ ++++ G + L+++ +K+ P+
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Query: 325 NIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEA 384
+ +++A V G +A + DEM + Y ++ +C +R EA
Sbjct: 325 VVTFS-----ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 385 TILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTG 444
+ + S +V TY+ LI+ ++ + LFR+M + + +Y T++ G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 445 LMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEP 504
L + ++ ++V D + ++ ++ CK G+LE A F + + EP
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 505 NDQTYLSLINGYVSAEK 521
+ TY +I G A K
Sbjct: 499 DIYTYNIMIEGMCKAGK 515
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 167/417 (40%), Gaps = 91/417 (21%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 239
PDV ACN+ L + + DA +V M + G D + L VKG+ NE
Sbjct: 168 PDVIACNSLL-SLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCIL-----VKGM---CNE 218
Query: 240 LEVLMGEF--------GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFG 291
+V +G GC VFY+ +I GY K G++ + + + L K +
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIEN-AYLVFKELK---LKGFMPT 274
Query: 292 GETFCAVVKEYLRKGNI------------KGLA------NLINEAQKLEPSNIKADNSIG 333
ETF ++ + ++G+ +GL N I +A+ + SIG
Sbjct: 275 LETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIG 334
Query: 334 YGIVNAC--------------VSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKEN 379
+ I N C G + A LDE + G Y P+++AYCK
Sbjct: 335 WIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSK 394
Query: 380 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYL 439
A+ L+++++ G + D+ TY LI + S A ++ + + V Y
Sbjct: 395 EYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYN 454
Query: 440 TIMTGLMENHR-----------------PE--LMAAFLDEVV--GD-------------- 464
+M+GL + R P+ + A +D + GD
Sbjct: 455 MLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEK 514
Query: 465 -PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAE 520
+++V H N++I FC++G L++A RMN P+ TY ++I+GYV +
Sbjct: 515 GVKVDVVHH--NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 128/341 (37%), Gaps = 56/341 (16%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTM---SNLGVRPDELTFGFLGYLYAVKGLQE 235
KPDVA N + C E E VG + S G+ P+ L++ L Y +
Sbjct: 342 KPDVATYNILINRLCKE----GKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397
Query: 236 KINELEVLMGEFGCSNKKVFYSNLISGYVKSGNL---ASMESTILRSLSDEDRKDWNFGG 292
++L + M E GC V Y LI G V SG++ +M+ ++ D +N
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457
Query: 293 ETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSI 352
C + G L +E + NI D + +++ + G D+A +
Sbjct: 458 SGLC-------KTGRFLPAKLLFSE---MLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Query: 353 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 412
G V + + ++K +C+ EA + ++ L D TY +I+ +
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Query: 413 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 472
QD +A +FR M + + +P ++
Sbjct: 568 QQDMATAIKIFRYMEKNKC------------------KPNVVT----------------- 592
Query: 473 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
+ S+I+ FC G + A TF+ M PN TY +LI
Sbjct: 593 -YTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 164/379 (43%), Gaps = 17/379 (4%)
Query: 163 CMFKNRVALDEKLEFMK----PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDE 218
C F+ +AL + +K PD + + G C V+DA +V M +G +PD
Sbjct: 132 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFC-RRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 219 LTF-GFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTIL 277
+ + + L K + + + + + + G V Y+ L++G S S S
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNS----SRWSDAA 245
Query: 278 RSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIV 337
R LSD +K T+ A++ +++ G + L E ++ +I D ++
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM---SIDPDIVTYSSLI 302
Query: 338 NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQ 397
N D+A+ + D M + G + Y ++ +CK R + L E+S GL
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 398 LDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAA 456
+ TY+ LI+ + D A F M + PD+ +Y ++ GL +N E A
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI-WTYNILLGGLCDNGELE-KAL 420
Query: 457 FLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
+ E + +++ + ++I CK G++E+A F ++ +P+ TY ++++G
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Query: 517 VSAEKHFNVLMLWNDVKRK 535
+ V L+ +K++
Sbjct: 481 CTKGLLHEVEALYTKMKQE 499
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 149/372 (40%), Gaps = 52/372 (13%)
Query: 169 VALDEKLEFM--KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY 226
++L +K+E + + D+ N + CC + V+ A ++G M LG PD +T G L
Sbjct: 105 ISLGKKMEVLGIRNDLYTFNIVINCFCCCFQ-VSLALSILGKMLKLGYEPDRVTIGSLVN 163
Query: 227 LYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRK 286
+ + L M E G V Y+ +I K+ + + + +RK
Sbjct: 164 GFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV----NDAFDFFKEIERK 219
Query: 287 DWNFGGETFCAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGY-GIVNACVSM 343
T+ A+V A L+++ +K+ P N I Y +++A V
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP------NVITYSALLDAFVKN 273
Query: 344 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 403
G +A + +EM + + Y ++ C +R EA + + S G DV +Y
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 404 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 463
+ LI ++ + LFR+M + GL+ N
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQ--------------RGLVSN--------------- 364
Query: 464 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHF 523
T +N++I F +AG ++ A+ F +M+F P+ TY L+ G +
Sbjct: 365 -------TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 524 NVLMLWNDVKRK 535
L+++ D++++
Sbjct: 418 KALVIFEDMQKR 429
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 142/343 (41%), Gaps = 10/343 (2%)
Query: 174 KLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL 233
KL F +PD+ + L G C + DA + + +G +P+ +T+ L
Sbjct: 146 KLGF-EPDLVTFTSLLNGYC-HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 234 QEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 293
EL MG G V Y+ L++G + G + +LR + R + N
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD-AAWLLRDMMKR-RIEPNV--I 259
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 353
TF A++ +++ G + L N ++ ++ D ++N GL D+A +
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQM---SVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
M G +Y ++ +CK R + + E+S G+ + TY LI+
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 414 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 473
A +F M R P +Y ++ GL N + E A + E + +++
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE-KALMIFEYMRKREMDINIVT 435
Query: 474 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
+ II CK G++EDA F + +PN TY ++I+G+
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 336 IVNACVSMGLSD-KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS 394
IV CV + +A L +M LG L + +L YC NR +A L +I
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 395 GLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPEL 453
G + +V TY LI ++ A LF M P++ +Y ++TGL E R
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV-TYNALVTGLCEIGRWGD 241
Query: 454 MAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
A L +++ RIE + ++I AF K G+L +A+ + M + P+ TY SLI
Sbjct: 242 AAWLLRDMM-KRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 514 NG 515
NG
Sbjct: 301 NG 302
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 124/313 (39%), Gaps = 52/313 (16%)
Query: 159 ALVRCMFKNRVALDEKLEFM--------KPDVAACNAALEGCC----------------- 193
L+RC+ KNR L+ +E +P+V NA + G C
Sbjct: 193 TLIRCLCKNR-HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK 251
Query: 194 -----------------CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEK 236
++ + +A+ + M + V PD T+G L + GL ++
Sbjct: 252 RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDE 311
Query: 237 INELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFC 296
++ LM GC +V Y+ LI G+ KS + ++ + +K T+
Sbjct: 312 ARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG----MKIFYEMSQKGVVANTITYT 367
Query: 297 AVVKEYLRKGNIKGLANLINE-AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 355
+++ Y G + N+ + + P +I+ N + G+ C + G +KA I +
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL---CCN-GKVEKALMIFEY 423
Query: 356 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 415
M + + Y I++ CK + +A L + S G++ +V TY +I
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 416 FQSAFSLFRDMRE 428
A SLF+ M+E
Sbjct: 484 IHEADSLFKKMKE 496
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 111/494 (22%), Positives = 206/494 (41%), Gaps = 49/494 (9%)
Query: 80 TDEAWKSFKSLTSHQA-FPPKPLTNSLITH------LSSLGDIHNLKRAFAS------AV 126
D+A+K + ++ FPP +T ++ H L + I L F+S +V
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 127 FLME------RNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNR---------VAL 171
+L +N + I + L K A P AL+ C+ +N + +
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 172 DEKLEFMKPDVAACNAALEGCCCELESVTDA----ERVVGTMSNLG--VRPDELTFGFLG 225
DE ++PDV L C+ V +A E++ G ++ G ++ D + F L
Sbjct: 321 DEVK--IRPDVVTL-GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377
Query: 226 YLYAVKGLQEKINELEVLMG-EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDED 284
G ++ EL V M E C V Y+ LI GY ++G L + + + R DE
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 285 RKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMG 344
+ + T +V R GL + +E +K + +++AC S+
Sbjct: 438 KPNV----VTVNTIVGGMCRH---HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 345 LSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYD 404
+KA ++M G S +Y ++ C+ R +A +V ++ G LD+ Y+
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 405 ALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 463
LI + + + + DM +E + PD +Y T+++ ++ E + ++++
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPD-SITYNTLISFFGKHKDFESVERMMEQMRE 609
Query: 464 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNF-LQFEPNDQTYLSLINGYVSAEKH 522
D ++ + ++I A+C G L++A + F+ M + PN Y LIN +
Sbjct: 610 DG-LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF 668
Query: 523 FNVLMLWNDVKRKL 536
L L ++K K+
Sbjct: 669 GQALSLKEEMKMKM 682
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 111/494 (22%), Positives = 206/494 (41%), Gaps = 49/494 (9%)
Query: 80 TDEAWKSFKSLTSHQA-FPPKPLTNSLITH------LSSLGDIHNLKRAFAS------AV 126
D+A+K + ++ FPP +T ++ H L + I L F+S +V
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 127 FLME------RNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNR---------VAL 171
+L +N + I + L K A P AL+ C+ +N + +
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 172 DEKLEFMKPDVAACNAALEGCCCELESVTDA----ERVVGTMSNLG--VRPDELTFGFLG 225
DE ++PDV L C+ V +A E++ G ++ G ++ D + F L
Sbjct: 321 DEVK--IRPDVVTL-GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377
Query: 226 YLYAVKGLQEKINELEVLMG-EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDED 284
G ++ EL V M E C V Y+ LI GY ++G L + + + R DE
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 285 RKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMG 344
+ + T +V R GL + +E +K + +++AC S+
Sbjct: 438 KPNV----VTVNTIVGGMCRH---HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 345 LSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYD 404
+KA ++M G S +Y ++ C+ R +A +V ++ G LD+ Y+
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 405 ALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 463
LI + + + + DM +E + PD +Y T+++ ++ E + ++++
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPD-SITYNTLISFFGKHKDFESVERMMEQMRE 609
Query: 464 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNF-LQFEPNDQTYLSLINGYVSAEKH 522
D ++ + ++I A+C G L++A + F+ M + PN Y LIN +
Sbjct: 610 DG-LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF 668
Query: 523 FNVLMLWNDVKRKL 536
L L ++K K+
Sbjct: 669 GQALSLKEEMKMKM 682
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 152/353 (43%), Gaps = 32/353 (9%)
Query: 174 KLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL 233
KL F +P + + L G C + +A +V +M G P+ + Y + GL
Sbjct: 142 KLGF-RPSIVTLGSLLNGFC-QGNRFQEAVSLVDSMDGFGFVPNVVI-----YNTVINGL 194
Query: 234 ---QEKINELEVLMGEFGCSNKK------VFYSNLISGYVKSGNLASMESTILRSLSDED 284
++ N LEV F C KK V Y+ LISG SG R L D
Sbjct: 195 CKNRDLNNALEV----FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA----RLLRDMV 246
Query: 285 RKDWNFGGETFCAVVKEYLRKGNIKGLANLINE-AQKLEPSNIKADNSIGYGIVNACVSM 343
++ + F A++ ++++GN+ NL E ++ N+ NS+ G C+
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF---CIHG 303
Query: 344 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 403
L D A + D M + G + Y ++ +CK R + L E++ GL D TY
Sbjct: 304 CLGD-AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 404 DALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVV 462
+ LI + A +F M + V PD+ +Y ++ L N + E A + E +
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV-TYNILLDCLCNNGKIE-KALVMVEDL 420
Query: 463 GDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 515
++V +N II C+ +L++A FR + +P+ Y+++I+G
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 140/351 (39%), Gaps = 59/351 (16%)
Query: 192 CCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLMGEFGC 249
C C ++ A ++G M LG RP +T G L G+ + QE ++ ++ + G FG
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR-FQEAVSLVDSMDG-FGF 180
Query: 250 SNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIK 309
V Y+ +I+G K+ +D N E F
Sbjct: 181 VPNVVIYNTVINGLCKN-------------------RDLNNALEVFYC------------ 209
Query: 310 GLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYI 369
+E I+AD +++ + G A +L +M + +
Sbjct: 210 -----------MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 370 PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-RE 428
++ + KE EA L E+ + +V TY++LI A +F M +
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 429 ARVPDLKGSYLTIMTGLMENHRPELMAAFLDE-----VVGDPRIEVGTHDWNSIIHAFCK 483
PD+ +Y T++TG ++ R E E +VGD +N++IH +C+
Sbjct: 319 GCFPDVV-TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD------AFTYNTLIHGYCQ 371
Query: 484 AGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKR 534
AG+L A++ F RM P+ TY L++ + K L++ D+++
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 10/227 (4%)
Query: 348 KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALI 407
+A S++D M+ G + +Y ++ CK A + + G++ D TY+ LI
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 408 ETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR 466
+S + A L RDM + ++ P++ I T + E + E + + +
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 467 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVL 526
V T +NS+I+ FC G L DA+ F M P+ TY +LI G+ +++ + +
Sbjct: 287 PNVFT--YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 527 MLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEK 573
L+ + ++ G G F +N ++ + G + A +V +
Sbjct: 345 KLFCE----MTYQGLVGDAFTYN---TLIHGYCQAGKLNVAQKVFNR 384
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 138/349 (39%), Gaps = 60/349 (17%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG--LQEK 236
+PD+ ++ L G C + ++DA +V M +G +PD TF L + G L K
Sbjct: 150 EPDIVTLSSLLNGYC-HSKRISDAVALVDQMVEMGYKPDTFTFTTL-----IHGLFLHNK 203
Query: 237 INELEVL---MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 293
+E L M + GC V Y +++G K
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK---------------------------- 235
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 353
+G+I NL+N K+E + IKA+ I I+++ + A +
Sbjct: 236 -----------RGDIDLALNLLN---KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
EM G + Y ++ C R ++A+ L+ + + +V T++ALI+
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 414 QDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD--PRIEVG 470
A L +M + + PD L I M N E F V D P I+
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT- 400
Query: 471 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 519
+N++I+ FCK R+ED FR M+ N TY ++I G+ A
Sbjct: 401 ---YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 16/238 (6%)
Query: 332 IGYG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVME 390
+ YG +VN G D A ++L++M A + ++ I+ + CK A L E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 391 ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENH 449
+ + G++ +V TY++LI + + A L +M E ++ P++ I E
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 450 RPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 509
E A L E + I+ T +N +I+ FC RL++A++ F+ M PN QTY
Sbjct: 344 LVE--AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 510 LSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAA 567
+LING+ ++ + + L+ R++S G G + Y + GFF A
Sbjct: 402 NTLINGFCKCKRVEDGVELF----REMSQRGLVG--------NTVTYTTIIQGFFQAG 447
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 128/291 (43%), Gaps = 23/291 (7%)
Query: 254 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 313
V Y++LI+ G + R LS+ K N TF A++ + ++G +
Sbjct: 294 VTYNSLINCLCNYGRWSDAS----RLLSNMLEKKINPNVVTFNALIDAFFKEGKLV---- 345
Query: 314 LINEAQKLEPSNIKAD---NSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYI 369
EA+KL I+ ++I Y + +N D+A + M + + Y
Sbjct: 346 ---EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYN 402
Query: 370 PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 429
++ +CK R + L E+S GL + TY +I+ + D SA +F+ M
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Query: 430 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 489
RVP +Y ++ GL + + A + + + +E+ +N++I CKAG++ +
Sbjct: 463 RVPTDIMTYSILLHGLCSYGKLD-TALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 490 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG 540
A F L +P+ TY ++I+G S +L +D+ RK+ DG
Sbjct: 522 AWDLFCS---LSIKPDVVTYNTMISGLCSKR----LLQEADDLFRKMKEDG 565
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/449 (20%), Positives = 183/449 (40%), Gaps = 29/449 (6%)
Query: 71 LHKSLITSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLME 130
LH+ TD+ + FK + A P N +I + GD+ + F M+
Sbjct: 234 LHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEE----MK 289
Query: 131 RNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFM--KPDVAACNAA 188
+V ++ T ++M+D + V E+++ M +PDV N A
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVGR-----------LDDTVCFFEEMKDMCCEPDVITYN-A 337
Query: 189 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFG 248
L C C+ + M G++P+ +++ L + +G+ ++ + V M G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 249 CSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNI 308
+ Y++LI K GNL+ ++ L + + +WN T+ A++ +
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLS--DAFRLGNEMLQVGVEWNV--VTYTALIDGLCDAERM 453
Query: 309 KGLANLIN--EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 366
K L + + P N+ + N++ +G V A D+A +L+E+ G L
Sbjct: 454 KEAEELFGKMDTAGVIP-NLASYNALIHGFVKA----KNMDRALELLNELKGRGIKPDLL 508
Query: 367 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 426
+Y + C + A +++ E+ G++ + Y L++ S + L +M
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 427 REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGR 486
+E + ++ ++ GL +N + + + D ++ + ++I CK +
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 487 LEDARRTFRRMNFLQFEPNDQTYLSLING 515
+E A F +M P+ Y SL++G
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 102/524 (19%), Positives = 197/524 (37%), Gaps = 98/524 (18%)
Query: 81 DEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESET 140
+EA + F + + FP N L+ + LG ++KR F + R P V T
Sbjct: 209 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGAR-PTVF---T 264
Query: 141 IHAMLDSMKGANTAAPAFALVRCM-FKNRVA-----------------LDEKLEFMK--- 179
+ M+D M A L M F+ V LD+ + F +
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 180 -----PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQ 234
PDV NA L C C+ + M G++P+ +++ L + +G+
Sbjct: 325 DMCCEPDVITYNA-LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 235 EKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS------------------MESTI 276
++ + V M G + Y++LI K GNL+ + +
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 277 LRSLSDEDR---KDWNFGG----------ETFCAVVKEYLRKGNIKGLANLINEAQ---- 319
+ L D +R + FG ++ A++ +++ N+ L+NE +
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 320 ----------------------------KLEPSNIKADNSIGYGIVNACVSMGLSDKAHS 351
+++ IKA++ I +++A G +
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 352 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS-GLQLDVETYDALIETS 410
+LDEM L V + + ++ CK ++A IS+ GLQ + + A+I+
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 623
Query: 411 MSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEV 469
++A +LF M ++ VPD + +Y ++M G + L A L + + + +++
Sbjct: 624 CKDNQVEAATTLFEQMVQKGLVPD-RTAYTSLMDGNFKQGNV-LEALALRDKMAEIGMKL 681
Query: 470 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
+ S++ +L+ AR M P++ +S++
Sbjct: 682 DLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 725
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 156/403 (38%), Gaps = 40/403 (9%)
Query: 152 NTAAPAFALVRCMFKNRV---ALDEKLE-FMK-------PDVAACNAALEGCCCELESVT 200
N P F + +F + L+E ++ F K P +CN L +L
Sbjct: 186 NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFA-KLGKTD 244
Query: 201 DAERVVGTMSNLGVRPDELTFGFL-------GYLYAVKGLQEKINELEVLMGEFGCSNKK 253
D +R M G RP T+ + G + A +GL E+ M G
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEE-------MKFRGLVPDT 297
Query: 254 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE--TFCAVVKEYLRKGNIKGL 311
V Y+++I G+ K G L E+ KD + T+ A++ + + G +
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFF------EEMKDMCCEPDVITYNALINCFCKFGKLPIG 351
Query: 312 ANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIP 370
E + N N + Y +V+A G+ +A +M +G Y
Sbjct: 352 LEFYREMK----GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 371 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 430
++ A CK ++A L E+ G++ +V TY ALI+ ++ + A LF M A
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 431 VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 490
V SY ++ G ++ + L+E+ G I+ + + I C ++E A
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRG-IKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 491 RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 533
+ M + N Y +L++ Y + L L +++K
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 371 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR-EA 429
+L + K +T + ++ +G + V TY+ +I+ D ++A LF +M+
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292
Query: 430 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 489
VPD +Y +++ G + R + F +E+ D E +N++I+ FCK G+L
Sbjct: 293 LVPD-TVTYNSMIDGFGKVGRLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 490 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKR 534
+R M +PN +Y +L++ + + + D++R
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 165/410 (40%), Gaps = 27/410 (6%)
Query: 135 VLESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFM--KPDVAACNAALEGC 192
++ES + +++D K N A F + L + L+ M D+ CN L C
Sbjct: 63 MVESRPLPSIIDFTKLLNVIAKMKK-----FDVVINLCDHLQIMGVSHDLYTCNL-LMNC 116
Query: 193 CCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNK 252
C+ A +G M LG PD +TF L + + E+ + M E G
Sbjct: 117 FCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD 176
Query: 253 KVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE----TFCAVVKEYLRKGNI 308
V Y+ +I K+G++ +LS D+ + N+G + ++V G
Sbjct: 177 VVMYTTIIDSLCKNGHVNY-------ALSLFDQME-NYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 309 KGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVY 368
+ +L+ K IK D +++A V G A + +EM + + + Y
Sbjct: 229 RDADSLLRGMTK---RKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 369 IPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE 428
++ +C E EA + + + G DV Y +LI + A +F +M +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 429 ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLE 488
+ +Y T++ G + +P + +V + +N ++H C G+++
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG-VPPNIRTYNVLLHCLCYNGKVK 404
Query: 489 DARRTFRRMNFLQFE---PNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 535
A F M + + PN TY L++G K LM++ D++++
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 84/405 (20%), Positives = 152/405 (37%), Gaps = 52/405 (12%)
Query: 174 KLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL 233
KL F +PD+ + + G C + +A +V M +G++PD + + + G
Sbjct: 135 KLGF-EPDIVTFTSLINGFCLG-NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 234 QEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 293
L M +G V Y++L++G SG +S +LR ++ K
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS-LLRGMTKRKIKPDVI--- 248
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACVSMGLSDKAHSI 352
TF A++ ++++G L NE ++ A N Y ++N G D+A +
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSI----APNIFTYTSLINGFCMEGCVDEARQM 304
Query: 353 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 412
M G + Y ++ +CK + +A + E+S GL + TY LI+
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 413 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 472
A +F M VP +Y ++ L N + + +++ V +
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 473 DW--NSIIHAFC-----------------------------------KAGRLEDARRTFR 495
W N ++H C KAG++++A F
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 496 RMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG 540
+ +PN TY ++I+G +L+ RK+ DG
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF----RKMKEDG 525
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 162/413 (39%), Gaps = 68/413 (16%)
Query: 79 DTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLES 138
+ D+ WK + + P + S+I L + + + AF+ M R ++ ++
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE----MIRQGILPDT 351
Query: 139 ETIHAMLDSM--KGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCEL 196
++D +G AA F F + D + PDV A + G C ++
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKF------FYEMHSRD-----ITPDVLTYTAIISGFC-QI 399
Query: 197 ESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFY 256
+ +A ++ M G+ PD +TF L Y G + + M + GCS V Y
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 257 SNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE----TFCAVVKEYLRKGNIKGLA 312
+ LI G K G+L S + + W G + T+ ++V + GNI+
Sbjct: 460 TTLIDGLCKEGDLDSANELL--------HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 313 NLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM------------NAL- 359
L+ E E + + AD +++A G DKA IL EM N L
Sbjct: 512 KLVGE---FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 360 ----------------------GGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQ 397
G + + ++K YC N AT + ++ S G+
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 398 LDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHR 450
D +TY+ L++ +++ + A+ LF++M+ +Y ++ G ++ +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 152/389 (39%), Gaps = 40/389 (10%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG-FLGYLYAVKGLQEKIN 238
PDV + + + G C + +++ M G++P+ +G +G L + L E
Sbjct: 279 PDVISYSTVVNGYC-RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 298
++ + G V Y+ LI G+ K G++ + S + D T+ A+
Sbjct: 338 AFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD----VLTYTAI 392
Query: 299 VKEYLRKGNIKGLANLINE--AQKLEPSNIK----------------------------- 327
+ + + G++ L +E + LEP ++
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 328 ADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 386
+ N + Y +++ G D A+ +L EM +G + Y I+ CK EA
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 387 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 446
LV E ++GL D TY L++ S + A + ++M + ++ +M G
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 447 ENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPND 506
+ E L+ ++ I +NS++ +C L+ A ++ M P+
Sbjct: 573 LHGMLEDGEKLLNWMLAKG-IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 507 QTYLSLINGYVSAEKHFNVLMLWNDVKRK 535
+TY +L+ G+ A L+ ++K K
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 175/441 (39%), Gaps = 57/441 (12%)
Query: 194 CELESVTDAERVVGTMSNLGVRPDELT----------FGFLGYLYAV------KGLQE-- 235
C+L + +A ++ M G PD ++ FG L ++ + KGL+
Sbjct: 257 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316
Query: 236 --------------KINELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILR 278
K+ E E E G V Y+ LI G+ K G++ +
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 279 SLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGI 336
S + D T+ A++ + + G++ L +E + LEP ++ +
Sbjct: 377 MHSRDITPD----VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE-----L 427
Query: 337 VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGL 396
+N G A + + M G S + Y ++ CKE A L+ E+ GL
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 397 QLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAA 456
Q ++ TY++++ S + + A L + A + +Y T+M ++ +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 457 FLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
L E++G ++ +N +++ FC G LED + M PN T+ SL+ Y
Sbjct: 548 ILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 517 VSAEKHFNVLMLWNDV-KRKLSSDGH------KGIKFDHNLVDA-FLYAMVKGGFFDAAM 568
++ D+ R + DG KG N+ +A FL+ +KG F ++
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF--SV 664
Query: 569 QVVEKSHEMKIFVDKWRYKQA 589
V S +K F+ + ++ +A
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEA 685
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 160/406 (39%), Gaps = 40/406 (9%)
Query: 69 TTLHKSLITS-----DTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFA 123
T ++ +LI D A K F + S P ++I+ +GD+ + F
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF- 409
Query: 124 SAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVA 183
+F P +S T +++ A AF + M + + P+V
Sbjct: 410 HEMFCKGLEP---DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS---------PNVV 457
Query: 184 ACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQE--KINELE 241
++G C E + + A ++ M +G++P+ T+ + V GL + I E
Sbjct: 458 TYTTLIDGLCKEGD-LDSANELLHEMWKIGLQPNIFTYNSI-----VNGLCKSGNIEEAV 511
Query: 242 VLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 298
L+GEF G + V Y+ L+ Y KSG + + + L K TF +
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG----KGLQPTIVTFNVL 567
Query: 299 VKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 356
+ + G ++ L+N A+ + P N NS+ + C+ L A +I +M
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAP-NATTFNSL---VKQYCIRNNLK-AATAIYKDM 622
Query: 357 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 416
+ G Y ++K +CK EA L E+ G + V TY LI+ + + F
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682
Query: 417 QSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV 462
A +F MR + K + + RP+ + +DE++
Sbjct: 683 LEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEII 728
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 133/340 (39%), Gaps = 12/340 (3%)
Query: 182 VAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELE 241
V +CN L + A V +GV + ++ + + G ++ + L
Sbjct: 210 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 242 VLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 301
+LM G + + YS +++GY + G L + + + RK + +++
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGEL----DKVWKLIEVMKRKGLKPNSYIYGSIIGL 325
Query: 302 YLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGG 361
R I LA ++ I D + +++ G A EM++
Sbjct: 326 LCR---ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 362 SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFS 421
+ + Y I+ +C+ EA L E+ GL+ D T+ LI + + AF
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 422 LFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV--VGDPRIEVGTHDWNSIIH 479
+ M +A +Y T++ GL + + L E+ +G ++ +NSI++
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG---LQPNIFTYNSIVN 499
Query: 480 AFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 519
CK+G +E+A + + TY +L++ Y +
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 162/413 (39%), Gaps = 68/413 (16%)
Query: 79 DTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLES 138
+ D+ WK + + P + S+I L + + + AF+ M R ++ ++
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE----MIRQGILPDT 351
Query: 139 ETIHAMLDSM--KGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCEL 196
++D +G AA F F + D + PDV A + G C ++
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKF------FYEMHSRD-----ITPDVLTYTAIISGFC-QI 399
Query: 197 ESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFY 256
+ +A ++ M G+ PD +TF L Y G + + M + GCS V Y
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 257 SNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE----TFCAVVKEYLRKGNIKGLA 312
+ LI G K G+L S + + W G + T+ ++V + GNI+
Sbjct: 460 TTLIDGLCKEGDLDSANELL--------HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 313 NLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM------------NAL- 359
L+ E E + + AD +++A G DKA IL EM N L
Sbjct: 512 KLVGE---FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 360 ----------------------GGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQ 397
G + + ++K YC N AT + ++ S G+
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 398 LDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHR 450
D +TY+ L++ +++ + A+ LF++M+ +Y ++ G ++ +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 152/389 (39%), Gaps = 40/389 (10%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG-FLGYLYAVKGLQEKIN 238
PDV + + + G C + +++ M G++P+ +G +G L + L E
Sbjct: 279 PDVISYSTVVNGYC-RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 298
++ + G V Y+ LI G+ K G++ + S + D T+ A+
Sbjct: 338 AFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD----VLTYTAI 392
Query: 299 VKEYLRKGNIKGLANLINE--AQKLEPSNIK----------------------------- 327
+ + + G++ L +E + LEP ++
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 328 ADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 386
+ N + Y +++ G D A+ +L EM +G + Y I+ CK EA
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 387 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 446
LV E ++GL D TY L++ S + A + ++M + ++ +M G
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 447 ENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPND 506
+ E L+ ++ I +NS++ +C L+ A ++ M P+
Sbjct: 573 LHGMLEDGEKLLNWMLAKG-IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 507 QTYLSLINGYVSAEKHFNVLMLWNDVKRK 535
+TY +L+ G+ A L+ ++K K
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 175/441 (39%), Gaps = 57/441 (12%)
Query: 194 CELESVTDAERVVGTMSNLGVRPDELT----------FGFLGYLYAV------KGLQE-- 235
C+L + +A ++ M G PD ++ FG L ++ + KGL+
Sbjct: 257 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316
Query: 236 --------------KINELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILR 278
K+ E E E G V Y+ LI G+ K G++ +
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 279 SLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGI 336
S + D T+ A++ + + G++ L +E + LEP ++ +
Sbjct: 377 MHSRDITPD----VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE-----L 427
Query: 337 VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGL 396
+N G A + + M G S + Y ++ CKE A L+ E+ GL
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 397 QLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAA 456
Q ++ TY++++ S + + A L + A + +Y T+M ++ +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 457 FLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
L E++G ++ +N +++ FC G LED + M PN T+ SL+ Y
Sbjct: 548 ILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 517 VSAEKHFNVLMLWNDV-KRKLSSDGH------KGIKFDHNLVDA-FLYAMVKGGFFDAAM 568
++ D+ R + DG KG N+ +A FL+ +KG F ++
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF--SV 664
Query: 569 QVVEKSHEMKIFVDKWRYKQA 589
V S +K F+ + ++ +A
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEA 685
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 160/406 (39%), Gaps = 40/406 (9%)
Query: 69 TTLHKSLITS-----DTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFA 123
T ++ +LI D A K F + S P ++I+ +GD+ + F
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF- 409
Query: 124 SAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVA 183
+F P +S T +++ A AF + M + + P+V
Sbjct: 410 HEMFCKGLEP---DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS---------PNVV 457
Query: 184 ACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQE--KINELE 241
++G C E + + A ++ M +G++P+ T+ + V GL + I E
Sbjct: 458 TYTTLIDGLCKEGD-LDSANELLHEMWKIGLQPNIFTYNSI-----VNGLCKSGNIEEAV 511
Query: 242 VLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 298
L+GEF G + V Y+ L+ Y KSG + + + L K TF +
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG----KGLQPTIVTFNVL 567
Query: 299 VKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 356
+ + G ++ L+N A+ + P N NS+ + C+ L A +I +M
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAP-NATTFNSL---VKQYCIRNNLK-AATAIYKDM 622
Query: 357 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 416
+ G Y ++K +CK EA L E+ G + V TY LI+ + + F
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682
Query: 417 QSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV 462
A +F MR + K + + RP+ + +DE++
Sbjct: 683 LEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEII 728
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 133/340 (39%), Gaps = 12/340 (3%)
Query: 182 VAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELE 241
V +CN L + A V +GV + ++ + + G ++ + L
Sbjct: 210 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 242 VLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 301
+LM G + + YS +++GY + G L + + + RK + +++
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGEL----DKVWKLIEVMKRKGLKPNSYIYGSIIGL 325
Query: 302 YLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGG 361
R I LA ++ I D + +++ G A EM++
Sbjct: 326 LCR---ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 362 SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFS 421
+ + Y I+ +C+ EA L E+ GL+ D T+ LI + + AF
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 422 LFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV--VGDPRIEVGTHDWNSIIH 479
+ M +A +Y T++ GL + + L E+ +G ++ +NSI++
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG---LQPNIFTYNSIVN 499
Query: 480 AFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 519
CK+G +E+A + + TY +L++ Y +
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 154/358 (43%), Gaps = 30/358 (8%)
Query: 194 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN-- 251
C+ + DA ++ +M+ PD +++ L + Y G K E +L + +
Sbjct: 354 CDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMG---KFVEASLLFDDLRAGDIH 406
Query: 252 -KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE-TFCAVVKEYLRKGNIK 309
V Y+ LI G +SGNL + L +E F T+ +VK +++ GN+
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQR-----LKEEMTTQLIFPDVITYTTLVKGFVKNGNLS 461
Query: 310 GLANLINEAQKLEPSNIKADNSIGYGIVNACVS---MGLSDKAHSILDEMNALGGSV-GL 365
+ +E + IK D GY V +G SDKA + +EM A L
Sbjct: 462 MATEVYDEMLR---KGIKPD---GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDL 515
Query: 366 GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 425
+Y + CK +A +I GL D TY +I + + F+ A +L+ +
Sbjct: 516 TIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE 575
Query: 426 MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG-DPRIEVGTHDWNSIIHAFCKA 484
M R+ +Y ++ G + R E + E+ R V TH N++++ CKA
Sbjct: 576 MLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTH--NALLYGMCKA 633
Query: 485 GRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND-VKRKLSSDGH 541
G +++A R +M PN +Y LI+ EK V+ L+ + + +++ DG+
Sbjct: 634 GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGY 691
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 101/481 (20%), Positives = 183/481 (38%), Gaps = 57/481 (11%)
Query: 143 AMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEF-MKPDVAACNAALEGC--CCELESV 199
L S++ N R M K + +E + P V N L+ C +LE V
Sbjct: 198 GFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERV 257
Query: 200 TDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNL 259
+++ M + E+T+ L ++ G E+ M G + ++ L
Sbjct: 258 ---DKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPL 314
Query: 260 ISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLA----NLI 315
I GY K G L D+ W E A + NI A I
Sbjct: 315 IEGYCKQG------------LFDD---AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359
Query: 316 NEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKA 374
++A++L S++ A + + Y +++ + MG +A + D++ A + Y ++
Sbjct: 360 DDAREL-LSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDG 418
Query: 375 YCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPD 433
C+ A L E+++ + DV TY L++ + + + A ++ +M R+ PD
Sbjct: 419 LCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
Query: 434 LKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRT 493
+Y T G + + +E+V +N I CK G L A
Sbjct: 479 -GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEF 537
Query: 494 FRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK----------LSSDGH-- 541
R++ + P+ TY ++I GY+ + L++++ RK + GH
Sbjct: 538 QRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAK 597
Query: 542 ----------------KGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWR 585
+G++ + +A LY M K G D A + + K E I +K+
Sbjct: 598 AGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYS 657
Query: 586 Y 586
Y
Sbjct: 658 Y 658
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 179/422 (42%), Gaps = 26/422 (6%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 237
+K V + +EG C E V +++++ S G++P+ T+ + Y + +
Sbjct: 220 VKITVYSLTIVVEGLCRRGE-VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 238 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDR-KDWNFGGETFC 296
+ +M + G KV Y+ L+ VK+G ++ E L DE R + +
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEK-----LFDEMRERGIESDVHVYT 333
Query: 297 AVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSIL 353
+++ RKGN+K L +E + L PS S YG +++ +G A ++
Sbjct: 334 SLISWNCRKGNMKRAFLLFDELTEKGLSPS------SYTYGALIDGVCKVGEMGAAEILM 387
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
+EM + G ++ V+ ++ YC++ EA+++ + G Q DV T + +
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL 447
Query: 414 QDFQSAFSLFRDMREARVPDLKGSYLTIM-TGLMENHRPELMAAFLDEVVGDPRIEVGTH 472
+ + A M E V SY ++ E + E F++ + ++
Sbjct: 448 KRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVE--MSSKGVQPNAI 505
Query: 473 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 532
+N +I+A+CK G++++AR+ M +P+ TY SLI+G A+ NV ++
Sbjct: 506 TYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD---NV----DEA 558
Query: 533 KRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFME 592
R S G KG+ + + + K G D A + ++ +D Y
Sbjct: 559 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Query: 593 TH 594
H
Sbjct: 619 MH 620
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 171/404 (42%), Gaps = 27/404 (6%)
Query: 189 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVL--- 243
L C C ++ A ++G M LG PD +T L G+ + +I++ L
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG-----NRISDAVALVDQ 173
Query: 244 MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYL 303
M E G V ++ LI G + + I R + + D T+ AVV
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDL----VTYGAVVNGLC 229
Query: 304 RKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSV 363
++G+ NL+N K+E + I+A+ I ++++ D A ++ EM G
Sbjct: 230 KRGDTDLALNLLN---KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 364 GLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF 423
+ Y ++ C R ++A+ L+ ++ + ++ T+ ALI+ + A L+
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 424 RDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV-GDPRIEVGTHDWNSIIHAFC 482
+M + + +Y +++ G R L+ ++ D V T +N++I+ FC
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT--YNTLINGFC 404
Query: 483 KAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHK 542
KA R++ FR M+ N TY +LI+G+ A N M++ K+ +S H
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF---KQMVSVGVHP 461
Query: 543 GIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 586
I + L+D + K G AM V E + D + Y
Sbjct: 462 NILTYNILLD----GLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 152/385 (39%), Gaps = 58/385 (15%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEK 236
+PD+ N+ L G C ++DA +V M +G +PD +TF L + GL K
Sbjct: 145 EPDIVTLNSLLNGFC-HGNRISDAVALVDQMVEMGYKPDTVTFTTL-----IHGLFLHNK 198
Query: 237 INELEVL---MGEFGCSNKKVFYSNLISGYVKSGN-------LASME-----------ST 275
+E L M + GC V Y +++G K G+ L ME ST
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 276 ILRSLSDEDRKD--WNFGGE-----------TFCAVVKEYLRKGNIKGLANLINEA--QK 320
++ SL +D N E T+ +++ G + L+++ +K
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 321 LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENR 380
+ P+ + +++A V G KA + +EM + Y ++ +C +R
Sbjct: 319 INPNLVTFS-----ALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDR 373
Query: 381 TAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLT 440
EA ++ + +V TY+ LI ++ LFR+M + + +Y T
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 433
Query: 441 IMTGLMENHRPELMAAFLDEVVGDPRIEVGTH----DWNSIIHAFCKAGRLEDARRTFRR 496
++ G + + ++V VG H +N ++ CK G+L A F
Sbjct: 434 LIHGFFQARDCDNAQMVFKQMV-----SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 488
Query: 497 MNFLQFEPNDQTYLSLINGYVSAEK 521
+ EP+ TY +I G A K
Sbjct: 489 LQRSTMEPDIYTYNIMIEGMCKAGK 513
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 137/332 (41%), Gaps = 45/332 (13%)
Query: 182 VAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELE 241
+ +CN L+G ++ + A R++ + + G P+ +TF L + +G ++ +L
Sbjct: 252 IVSCNKVLKGL--SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLF 309
Query: 242 VLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 301
+M + G + YS LI GY K+G L G + F +
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLG-------------------MGHKLF----SQ 346
Query: 302 YLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGG 361
L KG +K D + ++ V G A + M G
Sbjct: 347 ALHKG-------------------VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 362 SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFS 421
S + Y ++K C++ R EA + +I G++ + TY +LI+ + +S F+
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 422 LFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAF 481
L+ DM + P Y ++ GL + F +++G I + +NS+I +
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS-IRLNVVVFNSLIDGW 506
Query: 482 CKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
C+ R ++A + FR M +P+ T+ +++
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 143/338 (42%), Gaps = 27/338 (7%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 237
++ +V N+ ++G C L +A +V M G++PD TF + + ++G E+
Sbjct: 492 IRLNVVVFNSLIDGWC-RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 238 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 297
L M + G + Y LI + K M+ TI L D +++ C
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKH-----MKPTIGLQLFDLMQRNKISADIAVCN 605
Query: 298 VVKEYLRKGN-----IKGLANLINEAQKLEPSNIKADNSI-GYGIVNACVSMGLSDKAHS 351
VV L K + K NLI K+EP + + I GY S+ D+A
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIE--GKMEPDIVTYNTMICGY------CSLRRLDEAER 657
Query: 352 ILD--EMNALG-GSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 408
I + ++ G +V L + I +L CK N A + ++ G + + TY L++
Sbjct: 658 IFELLKVTPFGPNTVTLTILIHVL---CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 714
Query: 409 TSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIE 468
S D + +F LF +M+E + SY I+ GL + R + + + D ++
Sbjct: 715 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI-DAKLL 773
Query: 469 VGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPND 506
+ +I +CK GRL +A + M +P+D
Sbjct: 774 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 126/307 (41%), Gaps = 18/307 (5%)
Query: 213 GVRPDELTFGFLGYLYAVKGLQE--KINELEVLMGEF---GCSNKKVFYSNLISGYVKSG 267
G+ P+ +T+ L +KGL + +I E + G+ G V YS+LI G+ K G
Sbjct: 386 GISPNVVTYTIL-----IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 268 NLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 327
NL S + + D G + K+ L ++ ++ ++ +L N+
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL---NVV 497
Query: 328 ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATIL 387
NS+ ++ + D+A + M G + + +++ E R EA L
Sbjct: 498 VFNSL----IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFL 553
Query: 388 VMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLME 447
+ GL+ D Y LI+ LF M+ ++ ++ L +
Sbjct: 554 FFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 448 NHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQ 507
HR E + F + ++ + ++E +N++I +C RL++A R F + F PN
Sbjct: 614 CHRIEDASKFFNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 672
Query: 508 TYLSLIN 514
T LI+
Sbjct: 673 TLTILIH 679
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 132/337 (39%), Gaps = 65/337 (19%)
Query: 256 YSNLISGYVKSGNLASMESTILRSLSDE----DRKDWN--FGGETFCAVVKEYLRKGNI- 308
YS+LI G +GN+ ES + L + D +N GG C +KE L I
Sbjct: 293 YSSLIHGLCDAGNVDKAES-VFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 309 ---------------KGLA--NLINEAQ---KLEPSNIKADNSIGYGIV--NACVSMGLS 346
KGL I+EA +L P+ A + YGI CV+ G
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN-GYV 410
Query: 347 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 406
+KA ++ E+ + GG + + Y I+ CK+ R EA+ LV E+S G++L+ +AL
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470
Query: 407 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV---- 462
I + A R+M + SY ++ GL + + +AF+ E++
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530
Query: 463 ---------------GDPRIEVGTHDW---------------NSIIHAFCKAGRLEDARR 492
D +I++ W N +IH C G+L+DA
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 493 TFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 529
M N TY +L+ G+ ++W
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 91/193 (47%), Gaps = 4/193 (2%)
Query: 347 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 406
+KA LD M G + Y ++ K + +A L E+S G+ DV Y+ L
Sbjct: 166 EKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNIL 225
Query: 407 IETSMSSQDFQSAFSLFRDMRE--ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD 464
I+ + +D ++A L+ + E + P++K ++ +++GL + R + + + +
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVK-THNIMISGLSKCGRVDDCLKIWERMKQN 284
Query: 465 PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFN 524
R E + ++S+IH C AG ++ A F ++ + + TY +++ G+ K
Sbjct: 285 ER-EKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKE 343
Query: 525 VLMLWNDVKRKLS 537
L LW ++ K S
Sbjct: 344 SLELWRIMEHKNS 356
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 14/229 (6%)
Query: 336 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 395
++NA V K S+ G + L Y ++K CK+ +A + + G
Sbjct: 120 LLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEG 179
Query: 396 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELM 454
+ DV +Y +I + A LF +M E V PD+ Y ++ G ++ +
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVT-CYNILIDGFLKEKDHKTA 238
Query: 455 AAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 514
D ++ D + N +I K GR++D + + RM + E + TY SLI+
Sbjct: 239 MELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIH 298
Query: 515 GYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGF 563
G A ++N++ + +S +D Y + GGF
Sbjct: 299 GLCDAGNVDKAESVFNELDERKAS------------IDVVTYNTMLGGF 335
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 136/318 (42%), Gaps = 27/318 (8%)
Query: 211 NLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLA 270
N+ V P+ TF L + K E+ E+ M E G V Y+ + + YV+ G
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETV 240
Query: 271 SMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLE-PSNIKAD 329
ES ++ + +++ N G T VV Y R+G ++ + +++ +N+
Sbjct: 241 RAESEVVEKMVMKEKAKPN--GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 330 NSIGYGIVNACVSMGLSDKAHSIL----DEMNALGGSVGLGVYIPILKAYCKENRTAEAT 385
NS+ G V G+ + ++L +E L G+ + V + L C
Sbjct: 299 NSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKEC--------- 349
Query: 386 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 445
++ DV TY ++ S+ + A +F++M +A V +Y + G
Sbjct: 350 ---------NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 400
Query: 446 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 505
+ P+ L+ ++ + R V + ++I +C G ++DA R F +M PN
Sbjct: 401 VRAKEPKKAEELLETLIVESRPNVVI--FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 458
Query: 506 DQTYLSLINGYVSAEKHF 523
+T+ +L+ GY+ ++ +
Sbjct: 459 IKTFETLMWGYLEVKQPW 476
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Query: 336 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 395
++N + G +A ++ + G L Y +L A + + + +V E+ SG
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 396 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 455
+LD ++A+I S + + A M+E + +Y T++ G +PE +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 456 AFLDEVVGDPRIEVGTH--DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
LD ++ + ++VG + +N ++ A+CK ++E+A ++M P+ TY ++
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 514 NGYV 517
YV
Sbjct: 231 TCYV 234
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 112/249 (44%), Gaps = 14/249 (5%)
Query: 275 TILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY 334
T+ ++L++ + T A + + G+I + + ++E S K D+
Sbjct: 66 TVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS------EVEQSGTKLDSIFFN 119
Query: 335 GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC---KENRTAEATILVMEI 391
++NA G + A L +M LG + Y ++K Y K R++E L++E
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 392 SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM---EN 448
+ + ++ T++ L++ + + A+ + + M E V +Y TI T + E
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 449 HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 508
R E + ++++V + + ++ +C+ GR+ D R RRM ++ E N
Sbjct: 240 VRAE--SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV 297
Query: 509 YLSLINGYV 517
+ SLING+V
Sbjct: 298 FNSLINGFV 306
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 149/352 (42%), Gaps = 23/352 (6%)
Query: 215 RPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMES 274
RPD +TF + +LY+VKG E + M G V Y+ L+ Y G M
Sbjct: 185 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG----MSG 240
Query: 275 TILRSLSDEDRKDWNFGGETFCAVVKEYLRK---GNIKGLANLINEAQKLEPSNIKADNS 331
T L L D + ++ ++ Y R G K + L+ ++ +P N
Sbjct: 241 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF-LMMRKERRKP------NV 293
Query: 332 IGY-GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVME 390
+ Y +++A S G +A I +M G + +L A + + ++
Sbjct: 294 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA 353
Query: 391 ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHR 450
S G+ L+ Y++ I + +++ + + A +L++ MR+ +V ++ +++G +
Sbjct: 354 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 413
Query: 451 PELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYL 510
++L E+ D I + ++S++ A+ K G++ +A F +M EP+ Y
Sbjct: 414 YPEAISYLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 472
Query: 511 SLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGG 562
S+++ Y ++EK W GI+ D A + A KGG
Sbjct: 473 SMLHAYNASEK-------WGKACELFLEMEANGIEPDSIACSALMRAFNKGG 517
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 101/503 (20%), Positives = 199/503 (39%), Gaps = 47/503 (9%)
Query: 64 VSTLQTTLHKSLITSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFA 123
V T + +H + + + F+++ + P N+L+ + +H +
Sbjct: 188 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYA----VHGMSGTAL 243
Query: 124 SAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVA 183
S + +++N ++ + + +L+S + A + M K R KP+V
Sbjct: 244 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER---------RKPNVV 294
Query: 184 ACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVL 243
NA ++ + +A + M G++P+ ++ L L A ++K+N VL
Sbjct: 295 TYNALIDAYGSN-GFLAEAVEIFRQMEQDGIKPNVVSVCTL--LAACSRSKKKVNVDTVL 351
Query: 244 MG--EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 301
G + Y++ I Y+ N A +E I S +K TF ++
Sbjct: 352 SAAQSRGINLNTAAYNSAIGSYI---NAAELEKAIALYQSMRKKKV-KADSVTFTILISG 407
Query: 302 YLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGG 361
R + I+ +++E +I + ++ A G +A SI ++M G
Sbjct: 408 SCR---MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC 464
Query: 362 SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFS 421
+ Y +L AY + +A L +E+ ++G++ D AL+ + F
Sbjct: 465 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFV 524
Query: 422 LFRDMREARVPDLKGSYLTIMTG---LMENHRPELMAAFLDEVVGDPRIEVGTHDWNSII 478
L MRE +P + I + L E R + +D + P + +G N ++
Sbjct: 525 LMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYL--PSLSIGLT--NQML 580
Query: 479 HAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA---EKHFNVLMLW------ 529
H F K+G++E + F ++ N +TY L+ ++ K+ VL W
Sbjct: 581 HLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLE-WMSGAGI 639
Query: 530 ---NDVKRKLSSDGHK--GIKFD 547
N + R + S G + GI+F+
Sbjct: 640 QPSNQMYRDIISFGERSAGIEFE 662
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 163/391 (41%), Gaps = 26/391 (6%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTM--SNLGVRPDELTFGFLGYLYAVKGLQE 235
++PD N + C +L + A + +M RPD +TF + +LY+VKG E
Sbjct: 279 VRPDTTTFNIIIY-CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 337
Query: 236 KINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 295
+ M G V Y+ L+ Y G M T L L D + ++
Sbjct: 338 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG----MSGTALSVLGDIKQNGIIPDVVSY 393
Query: 296 CAVVKEYLRK---GNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACVSMGLSDKAHS 351
++ Y R G K + L+ ++ +P N + Y +++A S G +A
Sbjct: 394 TCLLNSYGRSRQPGKAKEVF-LMMRKERRKP------NVVTYNALIDAYGSNGFLAEAVE 446
Query: 352 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 411
I +M G + +L A + + ++ S G+ L+ Y++ I + +
Sbjct: 447 IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYI 506
Query: 412 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 471
++ + + A +L++ MR+ +V ++ +++G + ++L E+ D I +
Sbjct: 507 NAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM-EDLSIPLTK 565
Query: 472 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 531
++S++ A+ K G++ +A F +M EP+ Y S+++ Y ++EK W
Sbjct: 566 EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEK-------WGK 618
Query: 532 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGG 562
GI+ D A + A KGG
Sbjct: 619 ACELFLEMEANGIEPDSIACSALMRAFNKGG 649
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 90/455 (19%), Positives = 180/455 (39%), Gaps = 32/455 (7%)
Query: 64 VSTLQTTLHKSLITSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFA 123
V T + +H + + + F+++ + P N+L+ + +H +
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYA----VHGMSGTAL 375
Query: 124 SAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVA 183
S + +++N ++ + + +L+S + A + M K R KP+V
Sbjct: 376 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER---------RKPNVV 426
Query: 184 ACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVL 243
NA ++ + +A + M G++P+ ++ L L A ++K+N VL
Sbjct: 427 TYNALIDAYGSN-GFLAEAVEIFRQMEQDGIKPNVVSVCTL--LAACSRSKKKVNVDTVL 483
Query: 244 MG--EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 301
G + Y++ I Y+ N A +E I S +K TF ++
Sbjct: 484 SAAQSRGINLNTAAYNSAIGSYI---NAAELEKAIALYQSMRKKKV-KADSVTFTILISG 539
Query: 302 YLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGG 361
R + I+ +++E +I + ++ A G +A SI ++M G
Sbjct: 540 SCR---MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC 596
Query: 362 SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFS 421
+ Y +L AY + +A L +E+ ++G++ D AL+ + F
Sbjct: 597 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFV 656
Query: 422 LFRDMREARVPDLKGSYLTIMTG---LMENHRPELMAAFLDEVVGDPRIEVGTHDWNSII 478
L MRE +P + I + L E R + +D + P + +G N ++
Sbjct: 657 LMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYL--PSLSIGLT--NQML 712
Query: 479 HAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
H F K+G++E + F ++ N +TY L+
Sbjct: 713 HLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 747
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 158/371 (42%), Gaps = 41/371 (11%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY-LYAVKGLQEKIN 238
P + N+ L G C +++A +V M +G +PD +TF L + L+ E +
Sbjct: 143 PSIVTLNSLLNGFC-HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSGN-------LASME-----------STILRSL 280
+E ++ + GC V Y +I+G K G L ME +TI+ L
Sbjct: 202 LVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 281 SDEDRKDWNF---------GGE----TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 327
D F G + T+ ++ G + L+++ + NI
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD---MLEKNIN 317
Query: 328 ADNSIGYGIVNACVSMGLSDKAHSILDEM-NALGGSVGLGVYIPILKAYCKENRTAEATI 386
D +++A V G +A + DEM + + Y ++K +CK R E
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 387 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGL 445
+ E+S GL + TY LI ++D +A +F+ M V PD+ +Y ++ GL
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM-TYNILLDGL 436
Query: 446 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 505
N E A + E + +++ + ++I A CKAG++ED F ++ +PN
Sbjct: 437 CNNGNVE-TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 506 DQTYLSLINGY 516
TY ++++G+
Sbjct: 496 VVTYTTMMSGF 506
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 162/399 (40%), Gaps = 61/399 (15%)
Query: 194 CELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVL---MGEFG 248
C ++ A ++G M LG P +T L G+ + +I+E L M E G
Sbjct: 121 CRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG-----NRISEAVALVDQMVEMG 175
Query: 249 CSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNI 308
V ++ L+ G + + + + R + + D T+ AV+ ++G
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL----VTYGAVINGLCKRGEP 231
Query: 309 KGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVY 368
NL+N K+E I+AD I I++ D A + ++M G + Y
Sbjct: 232 DLALNLLN---KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 369 IPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE 428
P++ C R ++A+ L+ ++ + D+ ++ALI+ + A L+ +M +
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 429 ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLE 488
++ + P+++A +N++I FCK R+E
Sbjct: 349 SK-----------------HCFPDVVA------------------YNTLIKGFCKYKRVE 373
Query: 489 DARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG-HKGIKFD 547
+ FR M+ N TY +LI+G+ A N M++ +++ SDG H I
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF----KQMVSDGVHPDIMTY 429
Query: 548 HNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 586
+ L+D + G + A+ V E + + +D Y
Sbjct: 430 NILLD----GLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 131/338 (38%), Gaps = 20/338 (5%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 237
++ DV N ++G C + + + DA + M G++PD T+ L G
Sbjct: 246 IEADVVIYNTIIDGLC-KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 238 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET--F 295
+ L M E + VF++ LI +VK G L E L DE K + + +
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK-----LYDEMVKSKHCFPDVVAY 359
Query: 296 CAVVKEYLRKGNIK-GLANLINEAQKLEPSNIKADNSIGYGIVNA--CVSMGLSDKAHSI 352
++K + + ++ G+ +Q+ N ++ +G A C D A +
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC------DNAQMV 413
Query: 353 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 412
+M + G + Y +L C A ++ + ++LD+ TY +IE
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 413 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD-PRIEVGT 471
+ + + LF + V +Y T+M+G E A E+ D P GT
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 472 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 509
+N++I A + G + + M F + T+
Sbjct: 534 --YNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 19/241 (7%)
Query: 336 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 395
+V+AC G +KA +L EM G + Y ++ YCK++ EA + + SG
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG 268
Query: 396 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 455
+ ++ TY++ I + A LFR++++ + +Y T++ G + + A
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTAN-HVTYTTLIDGYCRMNDID-EA 326
Query: 456 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 515
L EV+ G +NSI+ C+ GR+ +A R M+ + EP++ T +LIN
Sbjct: 327 LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Query: 516 YVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN-LVDAF------------LYAMVKGG 562
Y E + + VK+K+ G K + + L+ F L++M++ G
Sbjct: 387 YCKIEDMVSAV----KVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG 442
Query: 563 F 563
F
Sbjct: 443 F 443
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 149/367 (40%), Gaps = 54/367 (14%)
Query: 178 MKPDVAACNAALEGCCCELESVTD-AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEK 236
+KP + AC L + +TD ++ M LGV + + L + + G EK
Sbjct: 164 LKPHLQACTVLLNSLV--KQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEK 221
Query: 237 INELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE--- 293
+L M E G Y+ LIS Y K +S +LS +DR + +
Sbjct: 222 AEKLLSEMEEKGVFPDIFTYNTLISVYCK-------KSMHFEALSVQDRMERSGVAPNIV 274
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 353
T+ + + + R+G ++ L E + ++ A++ +++ M D+A +
Sbjct: 275 TYNSFIHGFSREGRMREATRLFREIK----DDVTANHVTYTTLIDGYCRMNDIDEALRLR 330
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
+ M + G S G+ Y IL+ C++ R EA L+ E+S ++ D T + LI
Sbjct: 331 EVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKI 390
Query: 414 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 473
+D SA + + M E +GL ++ +
Sbjct: 391 EDMVSAVKVKKKMIE--------------SGL----------------------KLDMYS 414
Query: 474 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV- 532
+ ++IH FCK LE+A+ M F P TY L++G+ + K + L +
Sbjct: 415 YKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFE 474
Query: 533 KRKLSSD 539
KR L +D
Sbjct: 475 KRGLCAD 481
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 11/215 (5%)
Query: 344 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 403
G +D+A +L +M + G + Y ++ +C++ A I+ I GL+ + TY
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 404 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 463
LI+ + D Q+A + M + + Y TI+ GL + + L ++
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 464 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHF 523
+ R+ V +NSII F K G ++ A + M PN TY SL+NG +
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 524 NVLMLWNDVKRKLSSDGHKGIKFD----HNLVDAF 554
L + +++K +KG+K D L+D F
Sbjct: 637 QALEMRDEMK-------NKGVKLDIPAYGALIDGF 664
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 162/374 (43%), Gaps = 28/374 (7%)
Query: 171 LDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG--FLGYLY 228
DE E +V CN L C + ++ +A ++ M + G+ P+ +++ LG+
Sbjct: 432 FDESFETGLANVFVCNTILSWLCKQGKT-DEATELLSKMESRGIGPNVVSYNNVMLGHCR 490
Query: 229 AVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDW 288
+I +L E G YS LI G ++ + E L ++ +
Sbjct: 491 QKNMDLARIVFSNIL--EKGLKPNNYTYSILIDGCFRNHD----EQNALEVVNHMTSSNI 544
Query: 289 NFGGETFCAVVKEYLRKGNIKG----LANLINEAQKLEPSNIKADNSIGYGIVNACVSMG 344
G + ++ + G LAN+I E ++L S + ++ I++ G
Sbjct: 545 EVNGVVYQTIINGLCKVGQTSKARELLANMIEE-KRLCVSCMSYNS-----IIDGFFKEG 598
Query: 345 LSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYD 404
D A + +EM G S + Y ++ CK NR +A + E+ + G++LD+ Y
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 658
Query: 405 ALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLD---EV 461
ALI+ + +SA +LF ++ E + + Y ++++G M A LD ++
Sbjct: 659 ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN---MVAALDLYKKM 715
Query: 462 VGDP-RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAE 520
+ D R ++GT + ++I K G L A + M + P++ Y ++NG
Sbjct: 716 LKDGLRCDLGT--YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773
Query: 521 KHFNVLMLWNDVKR 534
+ V+ ++ ++K+
Sbjct: 774 QFVKVVKMFEEMKK 787
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 18/287 (6%)
Query: 296 CAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 355
CA++ LRK + + +K+ +K + G+V + GL ++A I E
Sbjct: 311 CAILITTLRKAG-RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTE 369
Query: 356 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 415
M G VY ++ AY K N E L E+ GL+ TY+ L++
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQ 429
Query: 416 FQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAA--FLD-EVVGDPRIEVGT 471
+L R+M + + P++K SY +++ + MAA FL + VG ++ +
Sbjct: 430 PDIVETLLREMEDLGLEPNVK-SYTCLISAYGRTKKMSDMAADAFLRMKKVG---LKPSS 485
Query: 472 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 531
H + ++IHA+ +G E A +F M +P+ +TY S+++ + + ++ +W
Sbjct: 486 HSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKL 545
Query: 532 VKRKLSSDGHKGIKFDHN-LVDAFLYAMVKGGFFDAAMQVVEKSHEM 577
+ R + KG + +N L+D F K G + A VV + +M
Sbjct: 546 MLR----EKIKGTRITYNTLLDGF----AKQGLYIEARDVVSEFSKM 584
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 3/200 (1%)
Query: 325 NIKADNSIGYGIVNACVSMGLSDK-AHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 383
N+ DN ++ G S K I ++M+ G V+ ++K++C E E
Sbjct: 303 NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEE 362
Query: 384 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 443
A ++ E+ G++ + Y+ L++ S + LF +MR+ + +Y +M
Sbjct: 363 ALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMD 422
Query: 444 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED-ARRTFRRMNFLQF 502
+P+++ L E + D +E + +I A+ + ++ D A F RM +
Sbjct: 423 AYARRMQPDIVETLLRE-MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGL 481
Query: 503 EPNDQTYLSLINGYVSAEKH 522
+P+ +Y +LI+ Y + H
Sbjct: 482 KPSSHSYTALIHAYSVSGWH 501
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 141/344 (40%), Gaps = 19/344 (5%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 239
PD C + S + + MS GV+ + FG L + +GL+E+
Sbjct: 306 PDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALV 365
Query: 240 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 299
++ M + G + + Y+ L+ Y KS ++ +E + + D+ K T+ ++
Sbjct: 366 IQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEG-LFTEMRDKGLKP---SAATYNILM 421
Query: 300 KEYLRKGNIKGLANLINEAQK--LEPSNIKADNSI--GYGIVNACVSMGLSDKAHSILDE 355
Y R+ + L+ E + LEP N+K+ + YG +SD A
Sbjct: 422 DAYARRMQPDIVETLLREMEDLGLEP-NVKSYTCLISAYGRTKK-----MSDMAADAFLR 475
Query: 356 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 415
M +G Y ++ AY +A E+ G++ VETY ++++ S D
Sbjct: 476 MKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGD 535
Query: 416 FQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR--IEVGTHD 473
+++ M ++ + +Y T++ G + L D V + ++
Sbjct: 536 TGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQG---LYIEARDVVSEFSKMGLQPSVMT 592
Query: 474 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV 517
+N +++A+ + G+ + + M L +P+ TY ++I +V
Sbjct: 593 YNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFV 636
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 107/258 (41%), Gaps = 10/258 (3%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYA-VKGLQEK 236
+KP A N ++ ++ E ++ M +LG+ P+ ++ L Y K + +
Sbjct: 410 LKPSAATYNILMDAYARRMQPDI-VETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDM 468
Query: 237 INELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFC 296
+ + M + G Y+ LI Y SG S + ++ ET+
Sbjct: 469 AADAFLRMKKVGLKPSSHSYTALIHAYSVSG----WHEKAYASFEEMCKEGIKPSVETYT 524
Query: 297 AVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 356
+V+ + R G+ L + + IK +++ GL +A ++ E
Sbjct: 525 SVLDAFRRSGDTGKLMEIWKLMLR---EKIKGTRITYNTLLDGFAKQGLYIEARDVVSEF 581
Query: 357 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 416
+ +G + Y ++ AY + + A+ L+ E+++ L+ D TY +I + +DF
Sbjct: 582 SKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDF 641
Query: 417 QSAFSLFRDM-REARVPD 433
+ AF + M + +VPD
Sbjct: 642 KRAFFYHKMMVKSGQVPD 659
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 161/397 (40%), Gaps = 57/397 (14%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 238
KP+VA L C + + A RV+ M + G+ PD + +L +G
Sbjct: 103 KPNVAHSTQLLYDLC-KANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAM 161
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 298
+L M + G + V Y+ L+ G G+L + F
Sbjct: 162 QLVEKMEDHGYPSNTVTYNALVRGLCMLGSL---------------NQSLQF-------- 198
Query: 299 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMN 357
V+ ++KG L P N+ Y ++ A +D+A +LDE+
Sbjct: 199 VERLMQKG--------------LAP------NAFTYSFLLEAAYKERGTDEAVKLLDEII 238
Query: 358 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 417
GG L Y +L +CKE RT +A L E+ + G + +V +Y+ L+ ++
Sbjct: 239 VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWE 298
Query: 418 SAFSLFRDMREA-RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV-GDPRIEVGTHDWN 475
A SL +M R P + +Y ++ L + R E L E+ G+ + V +N
Sbjct: 299 EANSLLAEMDGGDRAPSVV-TYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYN 357
Query: 476 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY---LSLINGYVSAEKHFNVLMLWNDV 532
+I CK G+++ + M + + +PN+ TY SL ++ F ++ ++
Sbjct: 358 PVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNK 417
Query: 533 KRKLSSDGHKGIKFD----HNLVDAF--LYAMVKGGF 563
++ + D +K + N AF LY M + GF
Sbjct: 418 QKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGF 454
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 139/350 (39%), Gaps = 39/350 (11%)
Query: 199 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 258
+ DA V+ M+ G P+ + + L + G K E++ LM G S Y+
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 259 LISGYVKSG-------------------NLASMESTI------------LRSLSDEDRKD 287
LI GY K+G N S S I LR + + ++
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 288 WNFGGETFCAVVKEYLRKG-NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLS 346
+ GG ++ + G + K L K + + N++ +G+ A G
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA----GKL 521
Query: 347 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 406
D+A I E+ G + Y ++ C + + EA + + E+ GL+ D TY L
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 407 IETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 465
I + + A + D R +PD+ +Y ++ G + R E F DE++
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVY-TYSVMIDGCCKAERTEEGQEFFDEMM-SK 639
Query: 466 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 515
++ T +N +I A+C++GRL A M PN TY SLI G
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 155/377 (41%), Gaps = 53/377 (14%)
Query: 170 ALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYA 229
A D + + PDV A+ C + V +A ++ M GV P+ +TF +
Sbjct: 248 AFDVVCKGVSPDVYLFTTAINAFC-KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLG 306
Query: 230 VKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWN 289
+ G ++ + M E G + YS L+ G ++ + D
Sbjct: 307 MCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG----------------DAY 350
Query: 290 FGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKA 349
F V+KE +KG P N+ N++ +++ + G +KA
Sbjct: 351 F-------VLKEMTKKGF---------------PPNVIVYNNL----IDSFIEAGSLNKA 384
Query: 350 HSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIET 409
I D M + G S+ Y ++K YCK + A L+ E+ S G ++ ++ ++I
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 444
Query: 410 SMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRP----ELMAAFLDEVVGDP 465
S F SA +M + G T+++GL ++ + EL FL++
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK----- 499
Query: 466 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNV 525
V T N+++H C+AG+L++A R + + + +Y +LI+G +K
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 526 LMLWND-VKRKLSSDGH 541
M ++ VKR L D +
Sbjct: 560 FMFLDEMVKRGLKPDNY 576
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 95/242 (39%), Gaps = 9/242 (3%)
Query: 326 IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 385
+K DN ++ +M ++A D+ G + Y ++ CK RT E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 386 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 445
E+ S +Q + Y+ LI S A L DM+ + +Y +++ G+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 446 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 505
R E A L E + +E + ++I + K G++ R M+ PN
Sbjct: 691 SIISRVE-EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 506 DQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVK-GGFF 564
TY +I GY + NV + R L+ KGI D F+Y +K GG
Sbjct: 750 KITYTVMIGGYA---RDGNV----TEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVL 802
Query: 565 DA 566
+A
Sbjct: 803 EA 804
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 139/350 (39%), Gaps = 39/350 (11%)
Query: 199 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 258
+ DA V+ M+ G P+ + + L + G K E++ LM G S Y+
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 259 LISGYVKSG-------------------NLASMESTI------------LRSLSDEDRKD 287
LI GY K+G N S S I LR + + ++
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 288 WNFGGETFCAVVKEYLRKG-NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLS 346
+ GG ++ + G + K L K + + N++ +G+ A G
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA----GKL 521
Query: 347 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 406
D+A I E+ G + Y ++ C + + EA + + E+ GL+ D TY L
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 407 IETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 465
I + + A + D R +PD+ +Y ++ G + R E F DE++
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVY-TYSVMIDGCCKAERTEEGQEFFDEMM-SK 639
Query: 466 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 515
++ T +N +I A+C++GRL A M PN TY SLI G
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 155/377 (41%), Gaps = 53/377 (14%)
Query: 170 ALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYA 229
A D + + PDV A+ C + V +A ++ M GV P+ +TF +
Sbjct: 248 AFDVVCKGVSPDVYLFTTAINAFC-KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLG 306
Query: 230 VKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWN 289
+ G ++ + M E G + YS L+ G ++ + D
Sbjct: 307 MCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG----------------DAY 350
Query: 290 FGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKA 349
F V+KE +KG P N+ N++ +++ + G +KA
Sbjct: 351 F-------VLKEMTKKGF---------------PPNVIVYNNL----IDSFIEAGSLNKA 384
Query: 350 HSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIET 409
I D M + G S+ Y ++K YCK + A L+ E+ S G ++ ++ ++I
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 444
Query: 410 SMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRP----ELMAAFLDEVVGDP 465
S F SA +M + G T+++GL ++ + EL FL++
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK----- 499
Query: 466 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNV 525
V T N+++H C+AG+L++A R + + + +Y +LI+G +K
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 526 LMLWND-VKRKLSSDGH 541
M ++ VKR L D +
Sbjct: 560 FMFLDEMVKRGLKPDNY 576
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 95/242 (39%), Gaps = 9/242 (3%)
Query: 326 IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 385
+K DN ++ +M ++A D+ G + Y ++ CK RT E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 386 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 445
E+ S +Q + Y+ LI S A L DM+ + +Y +++ G+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 446 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 505
R E A L E + +E + ++I + K G++ R M+ PN
Sbjct: 691 SIISRVE-EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 506 DQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVK-GGFF 564
TY +I GY + NV + R L+ KGI D F+Y +K GG
Sbjct: 750 KITYTVMIGGYA---RDGNV----TEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVL 802
Query: 565 DA 566
+A
Sbjct: 803 EA 804
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 152/349 (43%), Gaps = 24/349 (6%)
Query: 174 KLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL 233
KL F +P + + + G C + +A +V + LG P+ + + + + L
Sbjct: 142 KLGF-EPSIVTFGSLVNGFC-HVNRFYEAMSLVDQIVGLGYEPNVVIYNTI-----IDSL 194
Query: 234 QEK--INE-LEVL--MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDW 288
EK +N L+VL M + G V Y++LI+ SG R LSD R
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA----RILSDMMRMGI 250
Query: 289 NFGGETFCAVVKEYLRKGNIKGLANLINE-AQKLEPSNIKADNSIGYGIVNACVSMGLSD 347
+ TF A++ Y ++G + NE Q+ NI NS+ +N GL D
Sbjct: 251 SPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL----INGLCIHGLLD 306
Query: 348 KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALI 407
+A +L+ + + G Y ++ YCK R + ++ +S G+ D TY+ L
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366
Query: 408 ETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR 466
+ + F +A + M V PD+ ++ ++ GL ++ + L+++
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMY-TFNILLDGLCDHGKIGKALVRLEDLQKSKT 425
Query: 467 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 515
+ VG +N II CKA ++EDA F + P+ TY++++ G
Sbjct: 426 V-VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIG 473
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 120/275 (43%), Gaps = 12/275 (4%)
Query: 348 KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALI 407
+A S++D++ LG + +Y I+ + C++ + A ++ + G++ DV TY++LI
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 408 ETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR 466
S + + + DM R PD+ I E E + + +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 467 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVL 526
+ T +NS+I+ C G L++A++ + F PN TY +LINGY A++ + +
Sbjct: 287 PNIVT--YNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGM 344
Query: 527 MLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 586
+ + R DG G F +N + G F AA +V+ + + D + +
Sbjct: 345 KILCVMSR----DGVDGDTFTYN---TLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTF 397
Query: 587 KQAF--METHKKLKVAKLRKRNTKKMEAVIAFKNW 619
+ H K+ A +R + +K + V+ +
Sbjct: 398 NILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITY 432
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 164/381 (43%), Gaps = 33/381 (8%)
Query: 167 NRVALDEKL-EFMK-----PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELT 220
N++ EK+ E MK P++ +A ++G C + +V A + + + P+ +
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC-KTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 221 FGFL--GYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILR 278
FG L G+ A + + + L V M +FG Y+ LI G+ KSGN+ +E+ L
Sbjct: 307 FGTLVDGFCKARELVTAR--SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNM--LEAVGLL 362
Query: 279 SLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLA--NLINEA----QKLEPSNIKADNSI 332
S + + N + F + I GL + + EA QK++ I ++
Sbjct: 363 S----EMESLNLSPDVFTYTIL-------INGLCIEDQVAEANRLFQKMKNERIFPSSAT 411
Query: 333 GYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEIS 392
+++ ++A + EM A G + + ++ YC A L E++
Sbjct: 412 YNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT 471
Query: 393 SSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPE 452
G+ DV TY ALI+ + + A L+ DM EA + ++ ++ G + R
Sbjct: 472 IKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLS 531
Query: 453 LMAAFLDEVVGDPRIEVGTH-DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLS 511
+ F E + + H + +I C+ G + A R F M P+ +Y+S
Sbjct: 532 VAIDFYQE--NNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVS 589
Query: 512 LINGYVSAEKHFNVLMLWNDV 532
++ G++ ++ + +ML D+
Sbjct: 590 MLKGHLQEKRITDTMMLQCDM 610
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 7/190 (3%)
Query: 329 DNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILV 388
D I + + C GL K +LDEM +LG + +Y + C++N+ EA +
Sbjct: 198 DVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMF 257
Query: 389 MEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMEN 448
+ G+ ++ TY A+I+ + + + A+ L++++ A + + T++ G +
Sbjct: 258 ELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKA 317
Query: 449 HRPELMAAFLDEVVG---DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 505
+ +V DP + V +N +IH CK+G + +A M L P+
Sbjct: 318 RELVTARSLFVHMVKFGVDPNLYV----YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 506 DQTYLSLING 515
TY LING
Sbjct: 374 VFTYTILING 383
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 135/328 (41%), Gaps = 10/328 (3%)
Query: 189 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFG 248
L G E + + A+ V + + G PD T+ FL Y G +++ EL M
Sbjct: 791 LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850
Query: 249 CSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNI 308
C + ++ +ISG VK+GN+ +SD +D++ T+ ++ + G +
Sbjct: 851 CEANTITHNIVISGLVKAGNVDDALDLYYDLMSD---RDFSPTACTYGPLIDGLSKSGRL 907
Query: 309 KGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVY 368
L + + + + +I ++N G +D A ++ M G L Y
Sbjct: 908 YEAKQLF---EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964
Query: 369 IPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE 428
++ C R E E+ SGL DV Y+ +I S + A LF +M+
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 429 AR--VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGR 486
+R PDL +Y +++ L E +E + +E +N++I + +G+
Sbjct: 1025 SRGITPDLY-TYNSLILNLGIAGMVEEAGKIYNE-IQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 487 LEDARRTFRRMNFLQFEPNDQTYLSLIN 514
E A ++ M F PN TY L N
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 110/285 (38%), Gaps = 42/285 (14%)
Query: 347 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 406
D +L EM LG + + ++ + + EA ++ + G DV TY L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 407 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMEN-----------------H 449
I+ +++ A +F M+ R + +Y+T++ +N H
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 450 RPELM--AAFLD---------------EVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 492
P+++ +D +V+ D I H +N++I + RL+DA
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 493 TFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVD 552
F M L +P TY+ I+ Y + + L + +K KGI + +
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT-------KGIAPNIVACN 472
Query: 553 AFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKL 597
A LY++ K G A Q+ ++ + D Y M+ + K+
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM-MMKCYSKV 516
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 89/452 (19%), Positives = 174/452 (38%), Gaps = 37/452 (8%)
Query: 77 TSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVL 136
+ DEA K + + P + NSLI L + + F + M+ P V+
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR-MKEMKLKPTVV 574
Query: 137 ESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCEL 196
T + +L + A L M + P+ N + C C+
Sbjct: 575 ---TYNTLLAGLGKNGKIQEAIELFEGMVQKGCP---------PNTITFNTLFD-CLCKN 621
Query: 197 ESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFY 256
+ VT A +++ M ++G PD T+ + + G ++ E + KK+ Y
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG---QVKEAMCFFHQM----KKLVY 674
Query: 257 SN------LISGYVKSGNLASMESTILRSLSDEDRKDWN-FGGETFCAVVKEYLRKGNIK 309
+ L+ G VK+ + I L + + N F + +++ E
Sbjct: 675 PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAE-------A 727
Query: 310 GLANLINEAQKLEPSNIKAD-NSIGYGIVNACVSMGLSDKAHSILDEMNA-LGGSVGLGV 367
G+ N ++ +++L + I D +SI I+ A ++ ++ LG L
Sbjct: 728 GIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPT 787
Query: 368 YIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR 427
Y ++ + + A + +++ S+G DV TY+ L++ S F L+++M
Sbjct: 788 YNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMS 847
Query: 428 EARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRL 487
++ +++GL++ + +++ D + +I K+GRL
Sbjct: 848 THECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRL 907
Query: 488 EDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 519
+A++ F M PN Y LING+ A
Sbjct: 908 YEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 91/200 (45%), Gaps = 1/200 (0%)
Query: 336 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 395
+++ + G +++ + + M G + Y ++ +CK + +A L+ E+ + G
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 396 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 455
+ V TY ++I+ A+ LF + + R+ Y +++ G + R +
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 456 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 515
L+E++ + + WNS++ A KA + +A F+ M L+ PN TY LING
Sbjct: 678 LILEELM-QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILING 736
Query: 516 YVSAEKHFNVLMLWNDVKRK 535
K + W +++++
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQ 756
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 121/280 (43%), Gaps = 14/280 (5%)
Query: 295 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 354
F +++ + ++G + +L++E ++ S++ AD + +++ +G D A
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDE---MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 355 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 414
E+ A G Y ++ CK NR EA + + + Y+ +I S+
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 415 DFQSAFSLFRDMR-EARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 473
F A+SL R + +P + +Y I+T L + + + +E+ D + T
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVI-AYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLST-- 379
Query: 474 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 533
+N +I C+AG+L+ A M PN +T +++ ++K ++ ++
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 534 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEK 573
K+ + I F +L+D + K G D A +V EK
Sbjct: 440 YKVCTPDE--ITF-CSLID----GLGKVGRVDDAYKVYEK 472
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 156/372 (41%), Gaps = 31/372 (8%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG-LQEKI 237
+PD + A++ C + V + + LGV + T+ + + +G ++E +
Sbjct: 271 EPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAV 330
Query: 238 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE----DRKDWNFGGE 293
++ ++G FG + ++L++GY K GN + + +E D+ ++ E
Sbjct: 331 RVMDEMVG-FGIPMSVIAATSLVNGYCK-GNELGKALDLFNRMEEEGLAPDKVMFSVMVE 388
Query: 294 TFCA------VVKEYLRKGN-------------IKGLANLINEAQKLEPSNIKADNSIGY 334
FC ++ Y+R + I+G + LE N ++ I +
Sbjct: 389 WFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAH 448
Query: 335 GIVNACVSM-----GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVM 389
G + + + G D A S L M G + Y ++ A+C+ A +
Sbjct: 449 GFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFS 508
Query: 390 EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENH 449
E+ GL+ + TY LI+ ++D Q+A+ + M + + Y TI+ GL +
Sbjct: 509 EMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVG 568
Query: 450 RPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 509
+ L ++ + R + +NSII F K G + A T+R M+ PN T+
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTF 628
Query: 510 LSLINGYVSAEK 521
SLING+ + +
Sbjct: 629 TSLINGFCKSNR 640
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/345 (19%), Positives = 143/345 (41%), Gaps = 44/345 (12%)
Query: 227 LYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRK 286
L+ +G + +M + G VFY+N++ + + N+ + +I + ++ +
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNM-DLARSIFSEMLEKGLE 516
Query: 287 DWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLS 346
NF T+ ++ + + + + ++IN+ + SN +A+ I I+N +G +
Sbjct: 517 PNNF---TYSILIDGFFKNKDEQNAWDVINQ---MNASNFEANEVIYNTIINGLCKVGQT 570
Query: 347 DKA--------------------HSILD----------------EMNALGGSVGLGVYIP 370
KA +SI+D EM+ G S + +
Sbjct: 571 SKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTS 630
Query: 371 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 430
++ +CK NR A + E+ S L+LD+ Y ALI+ D ++A++LF ++ E
Sbjct: 631 LINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELG 690
Query: 431 VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 490
+ Y ++++G + + ++V D I + ++I K G + A
Sbjct: 691 LMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND-GISCDLFTYTTMIDGLLKDGNINLA 749
Query: 491 RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 535
+ + L P++ ++ L+NG + + ++K+K
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKK 794
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 154/418 (36%), Gaps = 55/418 (13%)
Query: 181 DVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKIN 238
++ CN L C C ++ A +G M LG P +TFG L G+ + + + +
Sbjct: 115 NLCTCNILLN-CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR-VYDALY 172
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 298
+ ++G G V Y+ +I G KS + + + R D D T+ ++
Sbjct: 173 MFDQMVG-MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV----VTYNSL 227
Query: 299 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 358
+ G +++ K E I D +++ACV G +A +EM
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKRE---IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 359 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 418
+ Y ++ C +R EA + + S G DV TY LI S+ +
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 419 AFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSII 478
LF +M + G++ N T + +I
Sbjct: 345 GMKLFCEMSQ--------------RGVVRN----------------------TVTYTILI 368
Query: 479 HAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSS 538
+C+AG+L A FRRM F PN TY L++G K L++ D+++
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK---- 424
Query: 539 DGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKK 596
G+ D + + M K G A + + + D W Y + +KK
Sbjct: 425 ---NGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 127/302 (42%), Gaps = 21/302 (6%)
Query: 129 MERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAA 188
ME++ + + T ++++ + + + A +V CM K + PDV NA
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY---------PDVFTFNAL 262
Query: 189 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFG 248
++ C E V++AE M + PD +T+ L Y + ++ E+ M G
Sbjct: 263 IDACVKE-GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 249 CSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNI 308
C V YS LI+GY KS + ++ + ++ T+ +++ Y R G +
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHG----MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 309 KGLANLINEAQ--KLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 366
+ + P NI N + +G+ + G +KA IL +M G +
Sbjct: 378 NVAEEIFRRMVFCGVHP-NIITYNVLLHGLCDN----GKIEKALVILADMQKNGMDADIV 432
Query: 367 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 426
Y I++ CK A+A + ++ GL D+ TY ++ + A +LFR M
Sbjct: 433 TYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Query: 427 RE 428
+E
Sbjct: 493 KE 494
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 175/439 (39%), Gaps = 61/439 (13%)
Query: 120 RAFASAVFLMER----NPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKL 175
R F + L+E NP ++E E ++ AN A + LDE
Sbjct: 145 RQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEV----------LDEMP 194
Query: 176 EF-MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQ 234
++ ++PD L+ C + SV +A +V M P+ F L Y + +G
Sbjct: 195 KYGLEPDEYVFGCLLDALC-KNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKL 252
Query: 235 EKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET 294
+ E+ V M E G V ++NL+SGY +G +A ++D ++ +
Sbjct: 253 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL----MNDMRKRGFEPNVNC 308
Query: 295 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 354
+ +++ R K + + ++E +AD +++ G+ DK +S+LD
Sbjct: 309 YTVLIQALCRTE--KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 366
Query: 355 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 414
+M G Y+ I+ A+ K+ + E L+ ++ G D+ Y+ +I +
Sbjct: 367 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLG 426
Query: 415 DFQSAFSLFRDMREARVPDLKGSYLTIMTG------LME--NHRPELMA----------- 455
+ + A L+ +M + +++ ++ G L+E NH E+++
Sbjct: 427 EVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGT 486
Query: 456 --AFLDEVVGDPRIEVGTHDWNSI-----------------IHAFCKAGRLEDARRTFRR 496
+ L+ +V D ++E+ W+ I IHA G +++A
Sbjct: 487 LKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLD 546
Query: 497 MNFLQFEPNDQTYLSLING 515
M + P TY L+ G
Sbjct: 547 MMEMDLMPQPNTYAKLMKG 565
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 131/326 (40%), Gaps = 55/326 (16%)
Query: 199 VTDAERVVGTMSNLGVRPDELTFG-FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYS 257
V A V+ M G+ PDE FG L L ++E E + +F + + +++
Sbjct: 183 VKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLR--YFT 240
Query: 258 NLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE 317
+L+ G+ + G L + +++ +KE + +I NL++
Sbjct: 241 SLLYGWCREGKLMEAKEVLVQ--------------------MKEAGLEPDIVVFTNLLS- 279
Query: 318 AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 377
GY G A+ ++++M G + Y +++A C+
Sbjct: 280 ---------------GYA------HAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCR 318
Query: 378 -ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 436
E R EA + +E+ G + D+ TY ALI +S+ DMR+ V +
Sbjct: 319 TEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQV 378
Query: 437 SYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD----WNSIIHAFCKAGRLEDARR 492
+Y+ IM + + E L+ + R G H +N +I CK G +++A R
Sbjct: 379 TYMQIMVA---HEKKEQFEECLELIEKMKR--RGCHPDLLIYNVVIRLACKLGEVKEAVR 433
Query: 493 TFRRMNFLQFEPNDQTYLSLINGYVS 518
+ M P T++ +ING+ S
Sbjct: 434 LWNEMEANGLSPGVDTFVIMINGFTS 459
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 14/248 (5%)
Query: 293 ETFCAVVKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAH 350
E F +++ + +K +++E K LEP D + +++A G +A
Sbjct: 168 ELFVVLMRRFASANMVKKAVEVLDEMPKYGLEP-----DEYVFGCLLDALCKNGSVKEAS 222
Query: 351 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 410
+ ++M L + +L +C+E + EA +++++ +GL+ D+ + L+
Sbjct: 223 KVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
Query: 411 MSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL--MENHRPELMAAFLD-EVVGDPRI 467
+ A+ L DMR+ Y ++ L E E M F++ E G
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYG---C 338
Query: 468 EVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLM 527
E + ++I FCK G ++ M P+ TY+ ++ + E+ L
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398
Query: 528 LWNDVKRK 535
L +KR+
Sbjct: 399 LIEKMKRR 406
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 18/235 (7%)
Query: 367 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 426
+++ +++ + N +A ++ E+ GL+ D + L++ + + A +F DM
Sbjct: 169 LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM 228
Query: 427 REARVPDLKGSYLTIMTGLMENHRPELMAA-----FLDEVVGDPRIEVGTHDWNSIIHAF 481
RE P+L+ + +++ G + LM A + E +P I V T+ ++ +
Sbjct: 229 REKFPPNLR-YFTSLLYGWCREGK--LMEAKEVLVQMKEAGLEPDIVVFTN----LLSGY 281
Query: 482 CKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGH 541
AG++ DA M FEPN Y LI EK + M R
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAM------RVFVEMER 335
Query: 542 KGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKK 596
G + D A + K G D V++ + + + Y Q + KK
Sbjct: 336 YGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKK 390
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 159/400 (39%), Gaps = 59/400 (14%)
Query: 176 EFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL-GYLYAVKGLQ 234
+F +PDV A NA + G C++ + DA RV+ M + PD +T+ + G L + L
Sbjct: 152 KFGQPDVFAYNALING-FCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 235 EKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET 294
+ L L+ + C + Y+ LI E+T+L DE K
Sbjct: 211 LALKVLNQLLSD-NCQPTVITYTILI------------EATMLEGGVDEALK-------- 249
Query: 295 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 354
++ E L +G +K D I+ G+ D+A ++
Sbjct: 250 ---LMDEMLSRG-------------------LKPDMFTYNTIIRGMCKEGMVDRAFEMVR 287
Query: 355 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 414
+ G + Y +L+A + + E L+ ++ S +V TY LI T
Sbjct: 288 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 415 DFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGT 471
+ A +L + M+E + SY ++ R ++ FL+ ++ D P I
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV--- 404
Query: 472 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 531
++N+++ CK G+ + A F ++ + PN +Y ++ + S+ L + +
Sbjct: 405 -NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 532 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVV 571
+ GI D ++ + + + G D A +++
Sbjct: 464 MM-------SNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 123/308 (39%), Gaps = 26/308 (8%)
Query: 170 ALDEKLEFM--------KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTF 221
+DE L+ M KPD+ N + G C E V A +V + G PD +++
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE-GMVDRAFEMVRNLELKGCEPDVISY 301
Query: 222 GFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLS 281
L +G E+ +L M C V YS LI+ + G + E+ L L
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE--EAMNLLKLM 359
Query: 282 DEDRKDWNFGGETFCAVVKEYLRKGN----IKGLANLINEAQKLEPSNIKADNSIGYGIV 337
E K ++ ++ + R+G I+ L +I++ + + Y V
Sbjct: 360 KE--KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC--------LPDIVNYNTV 409
Query: 338 NACVSM-GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGL 396
A + G +D+A I ++ +G S Y + A A +++E+ S+G+
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Query: 397 QLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAA 456
D TY+++I AF L DMR +Y ++ G + HR E
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN 529
Query: 457 FLDEVVGD 464
L+ +VG+
Sbjct: 530 VLESMVGN 537
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 160/393 (40%), Gaps = 34/393 (8%)
Query: 140 TIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCELESV 199
T ++D + A + R M K+R+ P V NA + G C + V
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIF---------PSVITYNALINGYCKD-GRV 387
Query: 200 TDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNL 259
A ++ M +P+ TF L G K L M + G S V Y+ L
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 260 ISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQ 319
I G + G++ +T + LS + D TF A++ + ++G + +
Sbjct: 448 IDGLCREGHM----NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 320 KLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD---EMNALGGSVGLGVYIPILKAYC 376
+ I D G +++ +G + A IL+ +M L L V + +L C
Sbjct: 504 R---KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGC 560
Query: 377 KENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR-EARVPDLK 435
K E ++ +I+ GL V TY L++ + S D +F + M+ +P++
Sbjct: 561 K---VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY 617
Query: 436 GSYLTIMTGLMENHRPE----LMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDAR 491
Y I+ GL + R E L++A D V + + ++ + G+L+ A
Sbjct: 618 -PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT-----YTVMVKGYVNNGKLDRAL 671
Query: 492 RTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFN 524
T R M +E ND+ Y SL+ G+V ++K +
Sbjct: 672 ETVRAMVERGYELNDRIYSSLLQGFVLSQKGID 704
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 20/251 (7%)
Query: 336 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 395
++ A GL DKA ++ DEM G + Y ++ C++ + EA + ++
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 396 LQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELM 454
+ V TY+ALI AF L M + A P+++ ++ +M GL +P
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR-TFNELMEGLCRVGKPYKA 425
Query: 455 AAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 514
L ++ D + +N +I C+ G + A + MN EP+ T+ ++IN
Sbjct: 426 VHLLKRML-DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 515 GYVSAEK-----HFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQ 569
+ K F LML KGI D + + K G A+
Sbjct: 485 AFCKQGKADVASAFLGLML------------RKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 570 VVEKSHEMKIF 580
++E +M+I
Sbjct: 533 ILETLVKMRIL 543
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 80/193 (41%), Gaps = 8/193 (4%)
Query: 349 AHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 408
A+ M A G VG+ Y I+ A CK T A + + +I G LD +L+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 409 TSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAF-LDEVVGDPR 466
+ + A +F M +E SY ++ GL E R E AF L + +G+
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLE--EAFGLKDQMGEKG 296
Query: 467 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVL 526
+ T + +I A C G ++ A F M +PN TY LI+G K +
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK----I 352
Query: 527 MLWNDVKRKLSSD 539
N V RK+ D
Sbjct: 353 EEANGVCRKMVKD 365
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 11/242 (4%)
Query: 328 ADNSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 386
A NS+ Y I ++ +G ++A + D+M G Y ++KA C +A
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 387 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 446
L E+ G + +V TY LI+ + A + R M + R+ +Y ++ G
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 447 ENHRPELMAAFLDEVVGDPR-IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 505
++ R ++ AF V + R + +N ++ C+ G+ A +RM P+
Sbjct: 383 KDGR--VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440
Query: 506 DQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFD 565
+Y LI+G + E H N + LSS I+ D A + A K G D
Sbjct: 441 IVSYNVLIDG-LCREGHMNT------AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 566 AA 567
A
Sbjct: 494 VA 495
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 150/380 (39%), Gaps = 50/380 (13%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 237
+ PD AC A + G C + E V + + V+ + + L + G EK
Sbjct: 180 VSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKA 239
Query: 238 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 297
L+ M + GC V Y+ L++ Y + L E +++ R ++
Sbjct: 240 EALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGV----MAEMVRSGIQLDAYSYNQ 295
Query: 298 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 357
++K + R + N + +++EP S I C + + KA+ + +EM
Sbjct: 296 LLKRHCRVSHPDKCYNFM--VKEMEPRGFCDVVSYSTLIETFCRASN-TRKAYRLFEEMR 352
Query: 358 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 417
G + + Y ++KA+ +E ++ A L+ +++ GL D Y +++ S +
Sbjct: 353 QKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVD 412
Query: 418 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSI 477
A+ +F DM E + P+ ++ +NS+
Sbjct: 413 KAYGVFNDMIEHEIT------------------PDAIS------------------YNSL 436
Query: 478 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLS 537
I C++GR+ +A + F M + P++ T+ +I G + +K +W+ +
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM---- 492
Query: 538 SDGHKGIKFDHNLVDAFLYA 557
KG D ++ D + A
Sbjct: 493 ---DKGFTLDRDVSDTLIKA 509
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 2/171 (1%)
Query: 347 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 406
D ++L +M LG + + L C+EN+ A + G + DV +Y L
Sbjct: 96 DLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTIL 155
Query: 407 IETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 465
I + A ++ M R PD K ++ GL + +L + E +
Sbjct: 156 INGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC-AALVVGLCHARKVDLAYEMVAEEIKSA 214
Query: 466 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
R+++ T +N++I FCKAGR+E A M+ + EP+ TY L+N Y
Sbjct: 215 RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 145/357 (40%), Gaps = 16/357 (4%)
Query: 166 KNRVAL---DEKLEF-MKPDVAACNAALEGCCCELESVTDAERVVG--TMSNLGVRPDEL 219
+N VAL D+ + F + PDV C+ + C D V T S+LG+ + +
Sbjct: 205 ENFVALHVYDQMISFEVSPDVFTCSIVVNAYC--RSGNVDKAMVFAKETESSLGLELNVV 262
Query: 220 TFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRS 279
T+ L YA+ G E + + LM E G S V Y++LI GY K G + E
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 280 LSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNA 339
+ D + G ++ Y R G I+ + + ++ ++ + +I ++N
Sbjct: 323 KEKKLVADQHMYG----VLMDGYCRTGQIRDAVRVHDNMIEI---GVRTNTTICNSLING 375
Query: 340 CVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLD 399
G +A I MN Y ++ YC+ EA L ++ +
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT 435
Query: 400 VETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLD 459
V TY+ L++ F SL++ M + V + S T++ L + +
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
Query: 460 EVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
V+ + T N +I CK ++ +A+ +N + +P QTY +L +GY
Sbjct: 496 NVLARGLL-TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGY 551
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 117/279 (41%), Gaps = 58/279 (20%)
Query: 286 KDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIV-------- 337
K+++F F ++K Y KG +K ++ DN YG +
Sbjct: 149 KEFSFSPTVFDMILKVYAEKGLVKNALHVF-------------DNMGNYGRIPSLLSCNS 195
Query: 338 --NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS- 394
+ V G + A + D+M + S + ++ AYC+ +A + E SS
Sbjct: 196 LLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSL 255
Query: 395 GLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTG-----LMEN- 448
GL+L+V TY++LI D + + R M E V +Y +++ G LME
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 449 -HRPELM----------------------AAFLDEV-VGDPRIEVG----THDWNSIIHA 480
H EL+ D V V D IE+G T NS+I+
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
Query: 481 FCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 519
+CK+G+L +A + F RMN +P+ TY +L++GY A
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRA 414
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 18/283 (6%)
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACVSMGLSDKAHSI 352
T VV Y R GN+ A++ E S N + Y ++N +G + +
Sbjct: 227 TCSIVVNAYCRSGNVDKAMVF---AKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRV 283
Query: 353 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 412
L M+ G S + Y ++K YCK+ EA + + L D Y L++
Sbjct: 284 LRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 413 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV---VGDPRIEV 469
+ + A + +M E V + TI L+ + +++ + D ++
Sbjct: 344 TGQIRDAVRVHDNMIEIGVR----TNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKP 399
Query: 470 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 529
H +N+++ +C+AG +++A + +M + P TY L+ GY +VL LW
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLW 459
Query: 530 NDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 572
+ + +G+ D L A+ K G F+ AM++ E
Sbjct: 460 KMMLK-------RGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/470 (20%), Positives = 190/470 (40%), Gaps = 50/470 (10%)
Query: 67 LQTTLHKSLI--TSDTDEAWKSFKSLTSHQA-------FPPKPLTNSLITHLSSLGDIHN 117
++ +L K+L+ T++ AW+ FK + S + P ++ +I
Sbjct: 1 MEQSLVKALLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQE 60
Query: 118 LKRAFASAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMF-KNRVAL----- 171
L S+ + +L +I A + + + A P F LVR F +N+ ++
Sbjct: 61 LHNLILSSSIQKTKLSSLLSVVSIFAKSNHI---DKAFPQFQLVRSRFPENKPSVYLYNL 117
Query: 172 -------DEKLEFMK---PDVAACNAA--------LEGCCCELESVTDAERVVGTMSNLG 213
+ ++EF+ D+ C A L C+ V A + M G
Sbjct: 118 LLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG 177
Query: 214 VRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASME 273
+P+E TFG L Y GL +K EL M FG KV Y+ ++S + + G E
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSE 237
Query: 274 STILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIG 333
+ + + D TF + + ++G + + + ++ + E + NSI
Sbjct: 238 KMVEKMREEGLVPDI----VTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSIT 293
Query: 334 YGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEIS 392
Y + + +GL + A ++ + + L Y L+ + + EA ++ +++
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 393 SSGLQLDVETY----DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMEN 448
G+ + +Y D L + M S D ++ L + R PD +Y ++ G
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLS-DAKTIVGLMK--RNGVCPDAV-TYGCLLHGYCSV 409
Query: 449 HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMN 498
+ + + L E++ + + + N ++H+ K GR+ +A R+MN
Sbjct: 410 GKVDAAKSLLQEMMRNNCLP-NAYTCNILLHSLWKMGRISEAEELLRKMN 458
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 167/402 (41%), Gaps = 66/402 (16%)
Query: 176 EFMKPDVAACNAALEGCCCELESVTDAERVVGTMS---NLGV-RPDELTF-----GF--L 224
E + PD+ N+ + C E V DA R+ M LG+ RP+ +T+ GF +
Sbjct: 246 EGLVPDIVTFNSRISALCKE-GKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV 304
Query: 225 GYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDED 284
G L K L E I E + L Y+ + G V+ G E T+L+ ++D+
Sbjct: 305 GLLEDAKTLFESIRENDDLASLQS-------YNIWLQGLVRHGKFIEAE-TVLKQMTDKG 356
Query: 285 RK----DWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNA 339
+N + C + G+ + L N +++ YG +++
Sbjct: 357 IGPSIYSYNILMDGLCKL-----------GMLSDAKTIVGLMKRNGVCPDAVTYGCLLHG 405
Query: 340 CVSMGLSDKAHSILDEM---NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGL 396
S+G D A S+L EM N L + + +L + K R +EA L+ +++ G
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI---LLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 397 QLDVETYDALIETSMSSQDFQSAFSLFRDMR---EARVPDLKGSYL-------------- 439
LD T + +++ S + A + + MR A + +L SY+
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLP 522
Query: 440 ------TIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRT 493
T++ GL + R E++G+ +++ + +N IH FCK G++ A R
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGE-KLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 494 FRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 535
+ M + +TY SLI G + F + L +++K K
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 142/338 (42%), Gaps = 23/338 (6%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 239
P + + N ++G C +L ++DA+ +VG M GV PD +T+G L + Y G +
Sbjct: 359 PSIYSYNILMDGLC-KLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKS 417
Query: 240 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF-CAV 298
L M C + L+ K G ++ E +LR ++++ +G +T C +
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE-LLRKMNEK-----GYGLDTVTCNI 471
Query: 299 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 358
+ + + G L + ++ + ++G + N+ + GL D + L E N
Sbjct: 472 IVD-----GLCGSGELDKAIEIVKGMRVHGSAALG-NLGNSYI--GLVDDS---LIENNC 520
Query: 359 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 418
L + Y +L CK R AEA L E+ LQ D Y+ I S
Sbjct: 521 LPDLI---TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISS 577
Query: 419 AFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSII 478
AF + +DM + +Y +++ GL ++ + +DE + + I +N+ I
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDE-MKEKGISPNICTYNTAI 636
Query: 479 HAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
C+ ++EDA M PN ++ LI +
Sbjct: 637 QYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 173/442 (39%), Gaps = 52/442 (11%)
Query: 82 EAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETI 141
EA K +T P N L+ L LG + + K + V LM+RN + ++ T
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK----TIVGLMKRNGVCPDAVTY 399
Query: 142 HAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCELESVTD 201
+L A +L++ M +N P+ CN L ++ +++
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCL---------PNAYTCNILLHSLW-KMGRISE 449
Query: 202 AERVVGTMSNLGVRPDELTF-----GFLGY------LYAVKGLQ------------EKIN 238
AE ++ M+ G D +T G G + VKG++ I
Sbjct: 450 AEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIG 509
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 298
++ + E C + YS L++G K+G A ++ + ++ + D +
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPD----SVAYNIF 565
Query: 299 VKEYLRKGNIKGLANLINEAQKLEP-SNIKADNSI--GYGIVNACVSMGLSDKAHSILDE 355
+ + ++G I ++ + +K +++ NS+ G GI N + H ++DE
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI------HGLMDE 619
Query: 356 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 415
M G S + Y ++ C+ + +AT L+ E+ + +V ++ LIE D
Sbjct: 620 MKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPD 679
Query: 416 FQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWN 475
F A +F + K ++M + L A L E V D E+GT +
Sbjct: 680 FDMAQEVFE--TAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYK 737
Query: 476 SIIHAFCKAGRLEDARRTFRRM 497
++ + CK LE A +M
Sbjct: 738 DLVESLCKKDELEVASGILHKM 759
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 156/403 (38%), Gaps = 40/403 (9%)
Query: 188 ALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQE--KINELEVLMG 245
AL G C + A ++ M G + D F+ Y ++ L KI+ + +L
Sbjct: 202 ALIGACARNNDIEKALNLIAKMRQDGYQSD-----FVNYSLVIQSLTRSNKIDSVMLLRL 256
Query: 246 EFGCSNKKV-----FYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVK 300
K+ +++I G+ KSG+ S L+ L + T +++
Sbjct: 257 YKEIERDKLELDVQLVNDIIMGFAKSGD----PSKALQLLGMAQATGLSAKTATLVSIIS 312
Query: 301 EYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALG 360
G L E L S IK ++ V G A S++ EM G
Sbjct: 313 ALADSGRTLEAEALFEE---LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 361 GSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAF 420
S Y ++ AY R A I++ E+ + +Q + + L+ ++Q F
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 421 SLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIH 479
+ ++M+ V PD + + I T N M F D ++ + IE WN++I
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTF-DRMLSEG-IEPDRVTWNTLID 487
Query: 480 AFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSD 539
CK GR A F M P TY +IN Y E+ W+D+KR L
Sbjct: 488 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER-------WDDMKRLLGKM 540
Query: 540 GHKGIKFD----HNLVDAFLYAMVKGGFFDAAMQVVEKSHEMK 578
+GI + LVD + K G F+ A++ +E EMK
Sbjct: 541 KSQGILPNVVTHTTLVDVY----GKSGRFNDAIECLE---EMK 576
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 132/324 (40%), Gaps = 24/324 (7%)
Query: 239 ELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 295
E E L E G + Y+ L+ GYVK+G L ES + S+ +++ + T+
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMV----SEMEKRGVSPDEHTY 377
Query: 296 CAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 355
++ Y+ G + ++ E +E +++ ++ + ++ G K +L E
Sbjct: 378 SLLIDAYVNAGRWESARIVLKE---MEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Query: 356 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 415
M ++G Y ++ + K N A + S G++ D T++ LI+
Sbjct: 435 MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Query: 416 FQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRI-EVGTHDW 474
A +F M +Y ++ + R + M L ++ + V TH
Sbjct: 495 HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTH-- 552
Query: 475 NSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVS---AEKHFNVLMLWND 531
+++ + K+GR DA M + +P+ Y +LIN Y +E+ N
Sbjct: 553 TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF----- 607
Query: 532 VKRKLSSDGHKGIKFDHN-LVDAF 554
R ++SDG K N L++AF
Sbjct: 608 --RVMTSDGLKPSLLALNSLINAF 629
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 10/210 (4%)
Query: 312 ANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 371
A L+++ Q L P A ++ AC +KA +++ +M G Y +
Sbjct: 186 AFLLSQKQTLTPLTYNA-------LIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLV 238
Query: 372 LKAYCKENRTAEATILVM--EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 429
+++ + N+ +L + EI L+LDV+ + +I S D A L +
Sbjct: 239 IQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQAT 298
Query: 430 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 489
+ + ++I++ L ++ R L A L E + I+ T +N+++ + K G L+D
Sbjct: 299 GLSAKTATLVSIISALADSGR-TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKD 357
Query: 490 ARRTFRRMNFLQFEPNDQTYLSLINGYVSA 519
A M P++ TY LI+ YV+A
Sbjct: 358 AESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 141/363 (38%), Gaps = 25/363 (6%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 237
+KP A NA L+G + + DAE +V M GV PDE T+ L Y G E
Sbjct: 335 IKPRTRAYNALLKGYV-KTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA 393
Query: 238 NELEVLMGEFGCSNKKVFYSNLISGYVKSGN-------LASMESTILRSLSDEDRKDWNF 290
+ M +S L++G+ G L M+S ++ DR+ +N
Sbjct: 394 RIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP----DRQFYNV 449
Query: 291 GGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAH 350
+TF G L + + ++ I+ D +++ G A
Sbjct: 450 VIDTF----------GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAE 499
Query: 351 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 410
+ + M G Y ++ +Y + R + L+ ++ S G+ +V T+ L++
Sbjct: 500 EMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVY 559
Query: 411 MSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPE-LMAAFLDEVVGDPRIEV 469
S F A +M+ + Y ++ + E + AF V+ ++
Sbjct: 560 GKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF--RVMTSDGLKP 617
Query: 470 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 529
NS+I+AF + R +A + M +P+ TY +L+ + +K V +++
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 677
Query: 530 NDV 532
++
Sbjct: 678 EEM 680
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 136/342 (39%), Gaps = 21/342 (6%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELT-FGFLGYLYAVKGLQEKIN 238
P+V N + G C +L V +A ++ M + G PD+++ + +GYL K + E +
Sbjct: 310 PNVVTYNCMIRGYC-DLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRD 368
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 298
++ + E G +V Y+ LI K + L L D K + + A+
Sbjct: 369 LMKKMAKEHGLVPDQVTYNTLIHMLTKHDH----ADEALWFLKDAQEKGFRIDKLGYSAI 424
Query: 299 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 358
V ++G + +LINE L + D +VN +G DKA +L M+
Sbjct: 425 VHALCKEGRMSEAKDLINEM--LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHT 482
Query: 359 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 418
G Y +L C+ ++ EA ++ + TY ++
Sbjct: 483 HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSE 542
Query: 419 AFSLFRDMREARVPDLKGSYL------TIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 472
A + R+M LKG + ++ L + R F++E + + +
Sbjct: 543 ACDVVREMV------LKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL-NKGCAINVV 595
Query: 473 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 514
++ ++IH FC+ L+ A M + + TY +L++
Sbjct: 596 NFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVD 637
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 103/229 (44%), Gaps = 12/229 (5%)
Query: 293 ETFCAVVKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAH 350
E F V+ Y R G ++ ++ Q+ +EP+ + + +I + V +KA
Sbjct: 243 EAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTI-----DVFVRANRLEKAL 297
Query: 351 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 410
L+ M +G + Y +++ YC +R EA L+ ++ S G D +Y ++
Sbjct: 298 RFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYL 357
Query: 411 MSSQDFQSAFSLFRDMREAR--VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIE 468
+ L + M + VPD + +Y T++ L ++ + FL + +
Sbjct: 358 CKEKRIVEVRDLMKKMAKEHGLVPD-QVTYNTLIHMLTKHDHADEALWFLKD-AQEKGFR 415
Query: 469 VGTHDWNSIIHAFCKAGRLEDARRTFRRM-NFLQFEPNDQTYLSLINGY 516
+ +++I+HA CK GR+ +A+ M + P+ TY +++NG+
Sbjct: 416 IDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGF 464
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 1/185 (0%)
Query: 347 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS-GLQLDVETYDA 405
++A +L++M++ G Y I+ CKE R E L+ +++ GL D TY+
Sbjct: 329 EEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNT 388
Query: 406 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 465
LI A +D +E K Y I+ L + R ++E++
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG 448
Query: 466 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNV 525
+ ++++ FC+ G ++ A++ + M+ +PN +Y +L+NG K
Sbjct: 449 HCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA 508
Query: 526 LMLWN 530
+ N
Sbjct: 509 REMMN 513
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/327 (17%), Positives = 143/327 (43%), Gaps = 15/327 (4%)
Query: 194 CELESVTDAERVVGTMSNLG-VRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNK 252
C+ +++A+ ++ M + G PD +T+ + + G +K +L +M G
Sbjct: 429 CKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 488
Query: 253 KVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLA 312
V Y+ L++G ++G S+E+ + ++S+E W+ T+ ++ R+G +
Sbjct: 489 TVSYTALLNGMCRTGK--SLEAREMMNMSEEHW--WSPNSITYSVIMHGLRREGKLSEAC 544
Query: 313 NLINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIP 370
+++ E + P ++ + ++ + G + +A ++E G ++ + +
Sbjct: 545 DVVREMVLKGFFPGPVEINL-----LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTT 599
Query: 371 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 430
++ +C+ + A ++ ++ DV TY L++T A L + M
Sbjct: 600 VIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKG 659
Query: 431 VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 490
+ +Y T++ + + + + A L++++ + +N +I C G+LE+A
Sbjct: 660 IDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRT---IYNQVIEKLCVLGKLEEA 716
Query: 491 RRTFRRMNFLQFEPNDQTYLSLINGYV 517
++ + +T +L+ GY+
Sbjct: 717 DTLLGKVLRTASRSDAKTCYALMEGYL 743
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 129/314 (41%), Gaps = 44/314 (14%)
Query: 211 NLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLA 270
N+ V P+ TF L + K E+ E+ M E G V Y+ + + YV+ G
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETV 240
Query: 271 SMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLE-PSNIKAD 329
ES ++ + +++ N G T VV Y R+G ++ + +++ +N+
Sbjct: 241 RAESEVVEKMVMKEKAKPN--GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 330 NSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVM 389
NS+ G V G+ D+ +++ E N
Sbjct: 299 NSLINGFVEVMDRDGI-DEVLTLMKECN-------------------------------- 325
Query: 390 EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENH 449
++ DV TY ++ S+ + A +F++M +A V +Y + G +
Sbjct: 326 ------VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 379
Query: 450 RPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 509
P+ L+ ++ + R V + ++I +C G ++DA R F +M PN +T+
Sbjct: 380 EPKKAEELLETLIVESRPNVVI--FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTF 437
Query: 510 LSLINGYVSAEKHF 523
+L+ GY+ ++ +
Sbjct: 438 ETLMWGYLEVKQPW 451
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Query: 336 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 395
++N + G +A ++ + G L Y +L A + + + +V E+ SG
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 396 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 455
+LD ++A+I S + + A M+E + +Y T++ G +PE +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 456 AFLDEVVGDPRIEVGTH--DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
LD ++ + ++VG + +N ++ A+CK ++E+A ++M P+ TY ++
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 514 NGYV 517
YV
Sbjct: 231 TCYV 234
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 129/302 (42%), Gaps = 21/302 (6%)
Query: 275 TILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY 334
T+ ++L++ + T A + + G+I + + ++E S K D+
Sbjct: 66 TVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS------EVEQSGTKLDSIFFN 119
Query: 335 GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC---KENRTAEATILVMEI 391
++NA G + A L +M LG + Y ++K Y K R++E L++E
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 392 SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM---EN 448
+ + ++ T++ L++ + + A+ + + M E V +Y TI T + E
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 449 HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 508
R E + ++++V + + ++ +C+ GR+ D R RRM ++ E N
Sbjct: 240 VRAE--SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV 297
Query: 509 YLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAM 568
+ SLING+V +M + + L+ +K D + A G+ + A
Sbjct: 298 FNSLINGFVE-------VMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAA 350
Query: 569 QV 570
QV
Sbjct: 351 QV 352
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 20/265 (7%)
Query: 194 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG----LQEKINELEVLMGEFGC 249
C+ + V +A VV M GVRPD +T+ + Y KG + ++ E +++M E
Sbjct: 199 CKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE-KMVMKEKAK 257
Query: 250 SNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIK 309
N + ++ GY + G + + R E R + N F +++ ++ +
Sbjct: 258 PNGRTC-GIVVGGYCREGRVRDGLRFVRR--MKEMRVEANL--VVFNSLINGFVEVMDRD 312
Query: 310 GLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYI 369
G+ ++ ++ N+KAD ++NA S G +KA + EM G Y
Sbjct: 313 GIDEVLT---LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 369
Query: 370 PILKAY--CKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR 427
+ K Y KE + AE + + + S + +V + +I S+ A +F M
Sbjct: 370 ILAKGYVRAKEPKKAEELLETLIVES---RPNVVIFTTVISGWCSNGSMDDAMRVFNKMC 426
Query: 428 EARV-PDLKGSYLTIMTGLMENHRP 451
+ V P++K ++ T+M G +E +P
Sbjct: 427 KFGVSPNIK-TFETLMWGYLEVKQP 450
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 149/389 (38%), Gaps = 63/389 (16%)
Query: 194 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEKINELEVLMGEF---G 248
C+L V A V M PD T+ L + GL +E+I+E +L+ E G
Sbjct: 198 CKLRFVDRAIEVFRGMPERKCLPDGYTYCTL-----MDGLCKEERIDEAVLLLDEMQSEG 252
Query: 249 CSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNI 308
CS V Y+ LI G K G+L + +V KG +
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLTRVTK-----------------------LVDNMFLKGCV 289
Query: 309 KGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVY 368
P+ + N++ +G+ C+ G DKA S+L+ M + Y
Sbjct: 290 --------------PNEVTY-NTLIHGL---CLK-GKLDKAVSLLERMVSSKCIPNDVTY 330
Query: 369 IPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE 428
++ K+ R +A L+ + G L+ Y LI + A SL+R M E
Sbjct: 331 GTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE 390
Query: 429 ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLE 488
Y ++ GL +P L+ ++ + + ++S++ F K G E
Sbjct: 391 KGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP-NAYTYSSLMKGFFKTGLCE 449
Query: 489 DARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDH 548
+A + ++ M+ N Y LI+G + +M+W+ + GIK D
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKML-------TIGIKPDT 502
Query: 549 NLVDAFLYAMVKGGFFDAAMQVVEKSHEM 577
+ + + G DAA+++ HEM
Sbjct: 503 VAYSSIIKGLCGIGSMDAALKLY---HEM 528
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 144/342 (42%), Gaps = 18/342 (5%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 239
PD ++G C E E + +A ++ M + G P + + L KG ++ +
Sbjct: 220 PDGYTYCTLMDGLCKE-ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTK 278
Query: 240 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 299
L M GC +V Y+ LI G G L S + R +S + + G +V
Sbjct: 279 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338
Query: 300 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNAL 359
K+ ++ L+++ E + I +++ G +++A S+ +M
Sbjct: 339 KQRRATDAVRLLSSM-------EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK 391
Query: 360 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSA 419
G + VY ++ C+E + EA ++ + +SG + TY +L++ + + A
Sbjct: 392 GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451
Query: 420 FSLFRDMREARVPDLKGSYLTIMTGLMENHR-PELMAAFLDEV-VGDPRIEVGTHDWNSI 477
++++M + K Y ++ GL R E M + + +G I+ T ++SI
Sbjct: 452 VQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG---IKPDTVAYSSI 508
Query: 478 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQ----TYLSLING 515
I C G ++ A + + M Q EP Q TY L++G
Sbjct: 509 IKGLCGIGSMDAALKLYHEM-LCQEEPKSQPDVVTYNILLDG 549
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 150/388 (38%), Gaps = 73/388 (18%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 237
MKPD A N + C EL + +AE+ V M GV P T+ L Y K +K
Sbjct: 420 MKPDHLAYNCLIRRFC-ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 238 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 297
++ M + G V Y LI+ K L +E+ I++
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKL--LEAQIVK------------------- 517
Query: 298 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 357
+ +E + I +++ C S G + A EM
Sbjct: 518 ---------------------RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 358 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 417
G + L Y ++ + +EA L++EIS GL+ DV TY++LI + + Q
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616
Query: 418 SAFSLFRDMREARV-PDLKGSYLTIMTGLME------------NHRPELMA--------- 455
+L+ +M+ + + P LK +L I E + +P+L+
Sbjct: 617 RCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYA 676
Query: 456 -------AF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQ 507
AF L + + + I + +NS+I K G+L + R MN + EP
Sbjct: 677 VHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEAD 736
Query: 508 TYLSLINGYVSAEKHFNVLMLWNDVKRK 535
TY ++ G+ + + + + + +++ K
Sbjct: 737 TYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 167/437 (38%), Gaps = 60/437 (13%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 239
P V N ++G C + + + DAE++ M + P +T+ L Y G EK +
Sbjct: 212 PSVFIYNVLIDGLC-KGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFK 270
Query: 240 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 299
+ M + ++ L+ G K+G + E+ + ++ KD F + F +
Sbjct: 271 VRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVL------KEMKDLGFVPDAFTFSI 324
Query: 300 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNAL 359
N K A L ++ S +K + ++NA G +KA IL A
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVD-SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 360 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLD-------------------- 399
G +Y ++ YC++ A + + + G++ D
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 400 ---------------VETYDALIETSMSSQDFQSAFSLFRDMRE-ARVPDLKGSYLTIMT 443
VETY+ LI +F F + ++M + +P++ SY T++
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV-SYGTLIN 502
Query: 444 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFE 503
L + + L A + + D + +N +I C G++EDA R + M E
Sbjct: 503 CLCKGSKL-LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Query: 504 PNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLY-AMVKG- 561
N TY +LI+G K L ++ R KG+K D F Y +++ G
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISR-------KGLK-----PDVFTYNSLISGY 609
Query: 562 GFFDAAMQVVEKSHEMK 578
GF + + EMK
Sbjct: 610 GFAGNVQRCIALYEEMK 626
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 1/196 (0%)
Query: 326 IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 385
I+ D I G++ + + +A ++ M A G V + Y ++ CK+ + EA
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 386 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 445
+ +++ L+ DV TY L+ Q+F+ + +M R + + +++ GL
Sbjct: 283 GIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGL 342
Query: 446 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 505
+ + E + VV D + +N++I + CK + +A F RM + PN
Sbjct: 343 RKRGKIEEALNLVKRVV-DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 506 DQTYLSLINGYVSAEK 521
D TY LI+ + K
Sbjct: 402 DVTYSILIDMFCRRGK 417
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 144/358 (40%), Gaps = 25/358 (6%)
Query: 164 MFKNRVALDEKLEFM--------KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVR 215
MF R LD L F+ K V N+ + G C + ++ AE + M N +
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC-KFGDISAAEGFMAEMINKKLE 469
Query: 216 PDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMEST 275
P +T+ L Y KG K L M G + ++ L+SG ++G +
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 276 ILRSLSDEDRKDWNFGGE--TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIG 333
+ +WN T+ +++ Y +G++ + E + I D
Sbjct: 530 F------NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE---MTEKGIVPDTYSY 580
Query: 334 YGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISS 393
+++ G + +A +D ++ + Y +L +C+E + EA + E+
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Query: 394 SGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPEL 453
G+ LD+ Y LI+ S+ +D + F L ++M + + Y +++ + +
Sbjct: 641 RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 454 MAAFLDEVVGDPRI--EVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 509
D ++ + + EV + ++I+ CKAG + +A +M + PN TY
Sbjct: 701 AFGIWDLMINEGCVPNEV---TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 155/385 (40%), Gaps = 54/385 (14%)
Query: 160 LVRCMFKNRVALDEKLEF--------MKPDVAACNAALEGCCCELESVTDAERVVGTMSN 211
L++ ++R LD L F + P+V +A L G + A + M +
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLV-KFRHFGLAMELFNDMVS 220
Query: 212 LGVRPDELTF-GFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLA 270
+G+RPD + G + L +K L + E+ M GC V Y+ LI G K +
Sbjct: 221 VGIRPDVYIYTGVIRSLCELKDLS-RAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV- 278
Query: 271 SMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADN 330
E+ ++ D KD T+C +V GL + Q+ E
Sbjct: 279 -WEAVGIKK--DLAGKDLKPDVVTYCTLVY---------GLC----KVQEFE-------- 314
Query: 331 SIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVME 390
+GL ++DEM L S +++ K + EA LV
Sbjct: 315 ------------IGLE-----MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKR 357
Query: 391 ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHR 450
+ G+ ++ Y+ALI++ + F A LF M + + +Y ++ +
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 451 PELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYL 510
+ +FL E+V D +++ + +NS+I+ CK G + A M + EP TY
Sbjct: 418 LDTALSFLGEMV-DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 511 SLINGYVSAEKHFNVLMLWNDVKRK 535
SL+ GY S K L L++++ K
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGK 501
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 109/522 (20%), Positives = 200/522 (38%), Gaps = 105/522 (20%)
Query: 80 TDEAWKSFKSLTSHQA-FPPKPLTNSLITHLSSLGDIHNLKRAFA------------SAV 126
D+A+K + ++ FPP +T ++ H G + ++ A ++V
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSV 260
Query: 127 FLMERNPMVLESETIHAMLDSM------KGANTAAPAFALVRCMFKNR---------VAL 171
+L + ++ +A D + K A P AL+ C+ +N + +
Sbjct: 261 WLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 172 DEKLEFMKPDVAACNAALEGCCCELESVTDA----ERVVGTMSNLG--VRPDELTFGFLG 225
DE ++PDV L C+ V +A E++ G ++ G ++ D + F L
Sbjct: 321 DEVK--IRPDVVTL-GILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLI 377
Query: 226 YLYAVKGLQEKINELEVLMG-EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDED 284
G ++ EL V M E C+ V Y+ LI GY ++G L + + + R DE
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 285 RKD----------------WNFGGETFCAVVKEYLRKGNIKGLANLINEA---------- 318
+ + N F + KE + KGN+ LI+
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV-KGNVVTYMTLIHACCSVSNVEKAM 496
Query: 319 ---QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAY 375
+K+ + D I Y +++ + A +++++ G S+ L Y ++ +
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 376 CKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLK 435
C +N T + ++ ++ G + D TY+ LI +DF+S + MRE
Sbjct: 557 CDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE------- 609
Query: 436 GSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFR 495
GL DP + + ++I A+C G L++A + F+
Sbjct: 610 -------DGL------------------DPTVTT----YGAVIDAYCSVGELDEALKLFK 640
Query: 496 RMNF-LQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKL 536
M + PN Y LIN + L L ++K K+
Sbjct: 641 DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 163/394 (41%), Gaps = 61/394 (15%)
Query: 182 VAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELE 241
+ +CN L+G ++ + A R++ + + G P+ +TF L + +G ++ +L
Sbjct: 252 IVSCNKVLKGL--SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLF 309
Query: 242 VLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 301
+M + G + YS LI GY K+G L ++L + D F + +
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV----VVFSSTIDV 365
Query: 302 YLRKGN--------------------------IKGLAN--LINEA---------QKLEPS 324
Y++ G+ IKGL I EA + +EPS
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 325 NIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEA 384
+ + +++ G ++ ++M +G + +Y ++ K+ A
Sbjct: 426 IVTYSS-----LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 385 TILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIM- 442
+++ ++L+V +++LI+ F A +FR M + PD+ ++ T+M
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV-ATFTTVMR 539
Query: 443 TGLMEN----HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMN 498
+ME+ H + L +++ +I N +IH K R+EDA + F +
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Query: 499 FLQFEPNDQTYLSLINGYVS------AEKHFNVL 526
+ EP+ TY ++I GY S AE+ F +L
Sbjct: 600 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 633
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/420 (20%), Positives = 163/420 (38%), Gaps = 33/420 (7%)
Query: 171 LDEKLEFMK--------PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG 222
L+E +F++ PD+ C + G C L A +++ + G PD +T+
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFC-RLGKTRKAAKILEILEGSGAVPDVITYN 176
Query: 223 FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSD 282
+ Y G +IN ++ S V Y+ ++ SG L + R L
Sbjct: 177 VMISGYCKAG---EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 283 EDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVS 342
+ D T+ +++ R + L++E + D +VN
Sbjct: 234 DCYPDV----ITYTILIEATCRDSGVGHAMKLLDE---MRDRGCTPDVVTYNVLVNGICK 286
Query: 343 MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVET 402
G D+A L++M + G + + IL++ C R +A L+ ++ G V T
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 403 YDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV 462
++ LI A + M + SY ++ G + + + +L+ +V
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 463 GD---PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 519
P I +N+++ A CK G++EDA +++ P TY ++I+G A
Sbjct: 407 SRGCYPDIVT----YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 520 EKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKI 579
K + L ++++ K +K D + + + + G D A++ + M I
Sbjct: 463 GKTGKAIKLLDEMR-------AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 101/477 (21%), Positives = 183/477 (38%), Gaps = 77/477 (16%)
Query: 71 LHKSLITSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLME 130
L + + T + +E +K +++ H P +LI LG R A + ++E
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT----RKAAKILEILE 164
Query: 131 RNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAALE 190
+ V + T + M+ A A +++ +R+++ PDV N L
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVL-----DRMSVS-------PDVVTYNTILR 212
Query: 191 GCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--------GYLYAVKGLQEKINELEV 242
C + + A V+ M PD +T+ L G +A+K L E
Sbjct: 213 SLC-DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDE------- 264
Query: 243 LMGEFGCSNKKVFYSNLISGYVKSGNL-------ASMEST-----------ILRSLSDED 284
M + GC+ V Y+ L++G K G L M S+ ILRS+
Sbjct: 265 -MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 285 RKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMG 344
R W E A + LRKG PS + + ++N G
Sbjct: 324 R--W-MDAEKLLA---DMLRKG--------------FSPSVVTFNI-----LINFLCRKG 358
Query: 345 LSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYD 404
L +A IL++M G Y P+L +CKE + A + + S G D+ TY+
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 405 ALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD 464
++ + A + + + +Y T++ GL + + LDE+
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 465 PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 521
++ T ++S++ + G++++A + F + PN T+ S++ G + +
Sbjct: 479 D-LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 158/396 (39%), Gaps = 53/396 (13%)
Query: 215 RPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMES 274
+P+E + + L +GL +K E+ M G S Y+ LI+ Y ++G
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRY----E 193
Query: 275 TILRSLSDEDRKDWNFGGETFCAVVKEYLRKG-NIKGLANLINEAQKLEPSNIKADNSIG 333
T L L + + T+ V+ R G + +GL L E + I+ D
Sbjct: 194 TSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAE---MRHEGIQPDIVTY 250
Query: 334 YGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISS 393
+++AC GL D+A + MN G L Y +++ + K R + L+ E++S
Sbjct: 251 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 310
Query: 394 SGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA--------------------RVPD 433
G D+ +Y+ L+E S + A +F M+ A R D
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 434 LKGSYLTIMTG-----------LME-----NHRPELMAAFLDEVVGDPRIEVGTHDWNSI 477
++ +L + + L+E + E++ F D V + IE + I
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV--EENIEPDMETYEGI 428
Query: 478 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLS 537
I A K G EDAR+ + M P+ + Y +I + A + L+ +N + S
Sbjct: 429 IFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGS 488
Query: 538 SDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEK 573
+ I+ H+L LY+ +GG + ++ +
Sbjct: 489 ---NPSIETFHSL----LYSFARGGLVKESEAILSR 517
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 165/414 (39%), Gaps = 71/414 (17%)
Query: 174 KLEFMKPDVAACNAALEGCCCELESVTDAERVVG---TMSNLGVRPDELTFGFLGYLYAV 230
K E + P + N + C D E ++G M + G++PD +T+ L A+
Sbjct: 203 KNEKISPSILTYNTVINACA---RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 231 KGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNF 290
+GL ++ + M + G YS+L+ + K LR L
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK-----------LRRL---------- 298
Query: 291 GGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAH 350
E C ++ E G++ + + N+ ++ A G +A
Sbjct: 299 --EKVCDLLGEMASGGSLPDITSY----------NV---------LLEAYAKSGSIKEAM 337
Query: 351 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 410
+ +M A G + Y +L + + R + L +E+ SS D TY+ LIE
Sbjct: 338 GVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVF 397
Query: 411 MSSQDFQSAFSLFRDMREARV-PDLKGSYLTIM-----TGLMENHRPELMAAFLDEVVGD 464
F+ +LF DM E + PD++ +Y I+ GL E+ R L +++V
Sbjct: 398 GEGGYFKEVVTLFHDMVEENIEPDME-TYEGIIFACGKGGLHEDARKILQYMTANDIVPS 456
Query: 465 PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFN 524
+ G +I AF +A E+A F M+ + P+ +T+ SL+ +
Sbjct: 457 SKAYTG------VIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGG---- 506
Query: 525 VLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQV---VEKSH 575
L + + LS GI + + +A + A +GG F+ A++ +EKS
Sbjct: 507 ---LVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 83/431 (19%), Positives = 164/431 (38%), Gaps = 52/431 (12%)
Query: 176 EFMKPDVAACNAALEGCCCELESVTD-AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQ 234
E ++PD+ N L C + + D AE V TM++ G+ PD T+ L +
Sbjct: 241 EGIQPDIVTYNTLLSACA--IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 235 EKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNL------------------ASMESTI 276
EK+ +L M G Y+ L+ Y KSG++ A+ S +
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 277 LRSLSDEDRKD-------------WNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEP 323
L R D + T+ +++ + G K + L ++ +
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD---MVE 415
Query: 324 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 383
NI+ D GI+ AC GL + A IL M A Y +++A+ + E
Sbjct: 416 ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEE 475
Query: 384 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 443
A + + G +ET+ +L+ + + + ++ + ++ +P + ++ +
Sbjct: 476 ALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIE 535
Query: 444 GLMENHR-PELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQF 502
+ + E + ++D + R + +++ + A +++ R F M
Sbjct: 536 AYKQGGKFEEAVKTYVD--MEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDI 593
Query: 503 EPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGG 562
P+ Y ++ Y E+ W+DV L + H ++ M+KG
Sbjct: 594 LPSIMCYCMMLAVYGKTER-------WDDVNELLEEMLSNRVSNIHQVIG----QMIKGD 642
Query: 563 F-FDAAMQVVE 572
+ D+ Q+VE
Sbjct: 643 YDDDSNWQIVE 653
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 159/384 (41%), Gaps = 22/384 (5%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 238
K D AA NA C A+++ M + G P E F L ++A ++
Sbjct: 155 KHDFAAYNA-FAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVY 213
Query: 239 ELEVLMGEFGCSNKKVFYSNLISGYVKSG----NLASMESTILRSLSDEDRKDWNFGGET 294
+ M +FG + Y+ ++ VK+G LA E L +E T
Sbjct: 214 YVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEE--------STT 265
Query: 295 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 354
F +VK + G I+ + ++ Q++ + K D ++ VS G D + + D
Sbjct: 266 FMILVKGLCKAGRIEEMLEIL---QRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWD 322
Query: 355 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 414
EM + Y ++ CK+ R L ME+ + +D E Y LIE ++
Sbjct: 323 EMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADG 382
Query: 415 DFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDW 474
+SA +L+ D+ ++ G Y ++ GL ++ + A L +V + +E
Sbjct: 383 KVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVD-KAYKLFQVAIEEELEPDFETL 441
Query: 475 NSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKR 534
+ I+ A+ RL D R+ L + +D YL+ + A++ N + L DV
Sbjct: 442 SPIMVAYVVMNRLSDFSNVLERIGELGYPVSD--YLTQFFKLLCADEEKNAMAL--DVFY 497
Query: 535 KLSSDGHKGIKFDHNLVDAFLYAM 558
L + GH + + L++A LY M
Sbjct: 498 ILKTKGHGSVSVYNILMEA-LYKM 520
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 6/211 (2%)
Query: 336 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 395
++N + G +AHSI + + G L Y ++ A ++ L+ ++ +G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 396 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 455
L+ D ++A+I S S + A +F M+E+ ++ T++ G + + E +
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 456 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 515
LD ++ D ++ N ++ A+C ++E+A +M +P+ T+ +L
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 516 YV------SAEKHFNVLMLWNDVKRKLSSDG 540
Y +AE ML N VK + + G
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCG 535
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 151/379 (39%), Gaps = 54/379 (14%)
Query: 213 GVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASM 272
G++PD + F + + G ++ ++ M E GC ++ LI GY K G L
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 273 ESTILRSLSDE-----DR----------------KDWN-------FGGE----TFCAVVK 300
+ L DE DR + WN +G + TF + K
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 301 EYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALG 360
Y R G+ ++I ++ + +K + IVN G ++A M LG
Sbjct: 504 AYARIGSTCTAEDMI--IPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG 561
Query: 361 GSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAF 420
L V+ ++K + N +V + G++ DV T+ L+ S D +
Sbjct: 562 VHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCE 621
Query: 421 SLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVG---DPRIEVGTHDWNS 476
++ DM E + PD+ ++ + G PE L+++ P + + T
Sbjct: 622 EIYTDMLEGGIDPDIH-AFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQ---- 676
Query: 477 IIHAFCKAGRLEDARRTFRRM-NFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 535
II +C AG ++ A + +++M + PN TY +LI G+ A++ + L D++ K
Sbjct: 677 IISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 736
Query: 536 ----------LSSDGHKGI 544
L +DG K I
Sbjct: 737 NVVPTRKTMQLIADGWKSI 755
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 20/269 (7%)
Query: 257 SNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLIN 316
+ L++G ++ G S I +L +E K T+ +V R+ + L +LI+
Sbjct: 323 TKLMNGLIERGRPQEAHS-IFNTLIEEGHKPSLI---TYTTLVTALTRQKHFHSLLSLIS 378
Query: 317 EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC 376
K+E + +K D + I+NA G D+A I ++M G + ++K Y
Sbjct: 379 ---KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG 435
Query: 377 KENRTAEAT-ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDL 434
K + E++ +L M + LQ + T + L++ + + + A+++ M+ V PD+
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 435 KGSYLTIMTGLMENHRPELMAAFLDEVVGDPR-----IEVGTHDWNSIIHAFCKAGRLED 489
+T T R D ++ PR ++ +I++ +C+ G++E+
Sbjct: 496 ----VTFNTLAKAYARIGSTCTAEDMII--PRMLHNKVKPNVRTCGTIVNGYCEEGKMEE 549
Query: 490 ARRTFRRMNFLQFEPNDQTYLSLINGYVS 518
A R F RM L PN + SLI G+++
Sbjct: 550 ALRFFYRMKELGVHPNLFVFNSLIKGFLN 578
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 119/279 (42%), Gaps = 23/279 (8%)
Query: 336 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 395
++N VS D A + + M + + Y ++K YCK +T +A + ++ + G
Sbjct: 228 LMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 287
Query: 396 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM-ENHRPELM 454
+ D TY +I+ + DF S +L+++M E + ++ ++ GL E E
Sbjct: 288 HEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGY 347
Query: 455 AAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 514
F + + + V + +I + K+G +EDA R RM F+P+ TY ++N
Sbjct: 348 TVFENMIRKGSKPNVAIY--TVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 405
Query: 515 GYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMV-----KGGFFDAAMQ 569
G L + + + + D +FD +++ Y+ + K G D A +
Sbjct: 406 G------------LCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAER 453
Query: 570 VVEKSHEMKIFVDKWRYK---QAFMETHKKLKVAKLRKR 605
+ E+ E D + Y AF + K + L KR
Sbjct: 454 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKR 492
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 127/318 (39%), Gaps = 53/318 (16%)
Query: 176 EFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY-LYAVKGLQ 234
EF KPD N + GC + DA ++ M V+P +TFG L + L ++
Sbjct: 146 EFGKPDACTYNILIHGCS-QSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVK 204
Query: 235 EKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET 294
E + ++ +G Y++LI + G L +
Sbjct: 205 EALKMKHDMLKVYGVRPTVHIYASLIKALCQIGEL------------------------S 240
Query: 295 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 354
F +K+ +G IK D +I ++++ + G S++ IL+
Sbjct: 241 FAFKLKDEAYEGKIK------------------VDAAIYSTLISSLIKAGRSNEVSMILE 282
Query: 355 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 414
EM+ G Y ++ +C EN + A ++ E+ GL+ DV +Y+ ++ +
Sbjct: 283 EMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIK 342
Query: 415 DFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV---GDPRIEVG 470
++ A LF DM R PD SY + GL E + E A LDE++ PR
Sbjct: 343 KWEEATYLFEDMPRRGCSPDTL-SYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPR---- 397
Query: 471 THDWNSIIHAFCKAGRLE 488
+ C++G+LE
Sbjct: 398 RDRLEGFLQKLCESGKLE 415
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 147/364 (40%), Gaps = 40/364 (10%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 237
+ PDV + GCC + +DA ++ M G PD + + L A GL ++
Sbjct: 427 IAPDVINYTTLIGGCCLQ-GKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEA 485
Query: 238 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 297
E +M G V ++ +I G + +G L E+ SL + R++ + FCA
Sbjct: 486 FETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEA-FYESLEHKSRENDASMVKGFCA 544
Query: 298 VVKEYLRKGNIKGLANLINEA-QKLEPSNIKADNSIGYGIVNA-CVSMGLSDKAHSILDE 355
A ++ A ++ S+ + + + C KA +LD
Sbjct: 545 --------------AGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDR 590
Query: 356 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 415
M LG +Y ++ A+C+ N +A + + + D+ TY +I T +
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNE 650
Query: 416 FQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPEL-----MAAFLDEVVGDPRIEV 469
+ A++LF DM+ V PD+ + ++ N PEL M AF +V+ D
Sbjct: 651 PKQAYALFEDMKRRDVKPDV------VTYSVLLNSDPELDMKREMEAF--DVIPD----- 697
Query: 470 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 529
+ +I+ +C L+ F+ M + P+ TY L+ E++ + M
Sbjct: 698 -VVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN--KPERNLSREMKA 754
Query: 530 NDVK 533
DVK
Sbjct: 755 FDVK 758
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 150/364 (41%), Gaps = 26/364 (7%)
Query: 256 YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLI 315
++ L++ + K GN++ + + + ++ +F ++ Y + GN+ L
Sbjct: 243 FNILMNKFCKEGNISDAQ----KVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL- 297
Query: 316 NEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAY 375
++E S + D ++NA D AH + DEM G ++ ++ +
Sbjct: 298 --KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 376 CKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDL 434
+ ++ S GLQ D+ Y+ L+ + D +A ++ M R PD
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD- 414
Query: 435 KGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTF 494
K +Y T++ G E E+ + IE+ +++++ CK GR+ DA R
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNG-IELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 495 RRMNFLQFEPNDQTYLSLINGYV---SAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLV 551
R M +P+D TY +++ + A+ F +L +++ SDGH +N++
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLL-------KEMQSDGHVPSVVTYNVL 526
Query: 552 DAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKLKVAKLRKRNTKKME 611
L + K G A +++ + + D Y +E H + A KR +K E
Sbjct: 527 ---LNGLCKLGQMKNADMLLDAMLNIGVVPDDITY-NTLLEGHHRH--ANSSKRYIQKPE 580
Query: 612 AVIA 615
I
Sbjct: 581 IGIV 584
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/339 (18%), Positives = 138/339 (40%), Gaps = 44/339 (12%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 237
++P V + N + G C ++ ++ + R+ M RPD T+ L + +
Sbjct: 271 LQPTVVSFNTLINGYC-KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 238 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 297
+ L M + G V ++ LI G+ ++G + M+ + + LS + D +
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVL----YNT 385
Query: 298 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 357
+V + + G++ N+++ + ++ D +++ G + A I EM+
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIR---RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 358 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 417
G + + ++ CKE R +A + E+ +G++ D TY +++ D Q
Sbjct: 443 QNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQ 502
Query: 418 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSI 477
+ F L ++M+ + H P ++ +N +
Sbjct: 503 TGFKLLKEMQS------------------DGHVPSVVT------------------YNVL 526
Query: 478 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
++ CK G++++A M + P+D TY +L+ G+
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH 565
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 172/441 (39%), Gaps = 82/441 (18%)
Query: 209 MSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFY-------SNLIS 261
+ N G P LTF L Y + KG E N +EVL +NK V Y S +IS
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKG--EMDNAIEVLEM---MTNKNVNYPFDNFVCSAVIS 179
Query: 262 GYVKSGN----LASMESTI------------------------LRSLSDEDRKDWNFGGE 293
G+ K G L ES + + + D R+ + G E
Sbjct: 180 GFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFE 239
Query: 294 TFCAVVKEYLRKGNIKG--LANLINEAQKLEPSNIKADNSIGYGI-VNACVSMGLSDKAH 350
C ++ G KG L + + + +++ + D + Y I ++ G ++A
Sbjct: 240 FDCVFYSNWIH-GYFKGGALVDALMQDREMVEKGMNRD-VVSYSILIDGLSKEGNVEEAL 297
Query: 351 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 410
+L +M G L Y I++ CK + EA +L I S G+++D Y LI+
Sbjct: 298 GLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGI 357
Query: 411 MSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD------ 464
+ AFS+ DM + + +Y T++ GL R VVGD
Sbjct: 358 CRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYST 417
Query: 465 ---PRIEVGTHD--------------------WNSIIHAFCKAGRLEDARRTFRRMNFLQ 501
I+V D N ++ AF G +A +R M +
Sbjct: 418 LLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMD 477
Query: 502 FEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKG 561
P+ TY ++I GY + L ++N++++ S + ++ ++D A+ K
Sbjct: 478 LTPDTATYATMIKGYCKTGQIEEALEMFNELRK---SSVSAAVCYNR-IID----ALCKK 529
Query: 562 GFFDAAMQVVEKSHEMKIFVD 582
G D A +V+ + E +++D
Sbjct: 530 GMLDTATEVLIELWEKGLYLD 550
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 8/176 (4%)
Query: 368 YIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR 427
Y I+ CKE +A L S G+ L+ TY++LI A LF +
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 428 EARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGTHDWNSIIHAFCKA 484
+ + +Y ++ L + LD +V P I + +NSI+ +CK
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIII----YNSIVDGYCKL 773
Query: 485 GRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK-LSSD 539
G+ EDA R R + P+ T S+I GY L ++ + K K +S+D
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/453 (20%), Positives = 175/453 (38%), Gaps = 65/453 (14%)
Query: 70 TLHKSLITSDTDEAWKSFKSLTS--HQAFPP-KPLTNSLITHLSSLGDIHNLKRAFASAV 126
T H L A+ +SL + ++PP K N I L + G L + S++
Sbjct: 85 TYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYG----LAGRYESSM 140
Query: 127 FLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEF-MKPDVAAC 185
+ R P ++ + L+++ F LV MFKN K F + P++ C
Sbjct: 141 RIFLRIPDFGVKRSVRS-LNTLLNVLIQNQRFDLVHAMFKN-----SKESFGITPNIFTC 194
Query: 186 NAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMG 245
N ++ C + + A +V+ + ++G+ P+ +T
Sbjct: 195 NLLVKALC-KKNDIESAYKVLDEIPSMGLVPNLVT------------------------- 228
Query: 246 EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRK 305
Y+ ++ GYV G++ S + R L + + W T+ ++ Y +
Sbjct: 229 ----------YTTILGGYVARGDMESAK----RVLEEMLDRGWYPDATTYTVLMDGYCKL 274
Query: 306 GNIKGLANLINEAQK--LEPSNIKADNSIGYGI-VNACVSMGLSDKAHSILDEMNALGGS 362
G A ++++ +K +EP N + YG+ + A S +A ++ DEM
Sbjct: 275 GRFSEAATVMDDMEKNEIEP------NEVTYGVMIRALCKEKKSGEARNMFDEMLERSFM 328
Query: 363 VGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSL 422
+ ++ A C++++ EA L ++ + D LI A L
Sbjct: 329 PDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKL 388
Query: 423 FRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFC 482
F + + +P L +Y T++ G+ E D++ + + + +N +I
Sbjct: 389 FDEFEKGSIPSLL-TYNTLIAGMCEKGELTEAGRLWDDMY-ERKCKPNAFTYNVLIEGLS 446
Query: 483 KAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 515
K G +++ R M + PN T+L L G
Sbjct: 447 KNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEG 479
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 298 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEM 356
+VK +K +I+ +++E PS N + Y I+ V+ G + A +L+EM
Sbjct: 197 LVKALCKKNDIESAYKVLDEI----PSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM 252
Query: 357 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 416
G Y ++ YCK R +EA ++ ++ + ++ + TY +I +
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 417 QSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDW- 474
A ++F +M E + +PD ++ L E+H+ +DE G R + +
Sbjct: 313 GEARNMFDEMLERSFMPD-SSLCCKVIDALCEDHK-------VDEACGLWRKMLKNNCMP 364
Query: 475 -----NSIIHAFCKAGRLEDARRTFRRMNFLQFE----PNDQTYLSLINGYVSAEKHFNV 525
+++IH CK GR+ +AR+ F +FE P+ TY +LI G +
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFD-----EFEKGSIPSLLTYNTLIAGMCEKGELTEA 419
Query: 526 LMLWNDV-KRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDK 583
LW+D+ +RK + F +N++ + + K G ++V+E+ E+ F +K
Sbjct: 420 GRLWDDMYERKCKPNA-----FTYNVL---IEGLSKNGNVKEGVRVLEEMLEIGCFPNK 470
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 151/364 (41%), Gaps = 25/364 (6%)
Query: 213 GVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASM 272
GV PD +T+ L Y+ KGL E+ EL M G S Y+ +I+G K G
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 273 ESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSI 332
+ L R + T+ +++ E +KG++ + ++ + ++ D
Sbjct: 325 KEVFAEML----RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSD---MRSRDVVPDLVC 377
Query: 333 GYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEIS 392
+++ G DKA + + G +Y +++ YC++ + A L E+
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 393 SSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMENH-- 449
G +DV TY+ ++ + A LF +M E A PD SY +T L++ H
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD---SY--TLTILIDGHCK 492
Query: 450 RPELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 508
L A L + + + RI + +N+++ F K G ++ A+ + M + P +
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 509 YLSLINGYVSAEKHFNVLMLWNDVKRK-------LSSDGHKGIKFDHNLVD--AFLYAMV 559
Y L+N S +W+++ K + + KG N D +FL M+
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 560 KGGF 563
GF
Sbjct: 613 SEGF 616
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 92/467 (19%), Positives = 174/467 (37%), Gaps = 99/467 (21%)
Query: 94 QAFPPKPLT-NSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETIHAML-DSMKGA 151
+ F P T N++I L G K FA M R+ + +S T ++L ++ K
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAE----MLRSGLSPDSTTYRSLLMEACKKG 354
Query: 152 NTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSN 211
+ +V D + + PD+ C +++ ++ A ++
Sbjct: 355 DVVET----------EKVFSDMRSRDVVPDLV-CFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 212 LGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS 271
G+ PD + + L Y KG+ L M + GC+ V Y+ ++ G K L
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 272 MESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKAD-- 329
+ + ++ + T ++ + + GN++ L QK++ I+ D
Sbjct: 464 AD----KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF---QKMKEKRIRLDVV 516
Query: 330 --NSI--GYG-----------------------------IVNACVSMGLSDKAHSILDEM 356
N++ G+G +VNA S G +A + DEM
Sbjct: 517 TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Query: 357 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 416
+ + + ++K YC+ ++ + ++ S G D +Y+ LI + ++
Sbjct: 577 ISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENM 636
Query: 417 QSAFSLFRDMREAR---VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 473
AF L + M E + VPD+
Sbjct: 637 SKAFGLVKKMEEEQGGLVPDV-------------------------------------FT 659
Query: 474 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAE 520
+NSI+H FC+ ++++A R+M P+ TY +ING+VS +
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQD 706
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 118/311 (37%), Gaps = 44/311 (14%)
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 353
T +V + G ++ + +++ Q+ + D +++A S GL ++A ++
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQE---KGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
+ M G S G+ Y ++ CK + A + E+ SGL D TY +L+ +
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 414 QDFQSAFSLFRDMREAR-VPDLK--GSYLTIMT-------GLMENHRPELMAAFLDEVVG 463
D +F DMR VPDL S +++ T LM + + D V+
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 464 DPRIE------------------------VGTHDWNSIIHAFCKAGRLEDARRTFRRMNF 499
I+ + +N+I+H CK L +A + F M
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 500 LQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMV 559
P+ T LI+G+ N + L+ +K K I+ D + L
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK-------EKRIRLDVVTYNTLLDGFG 526
Query: 560 KGGFFDAAMQV 570
K G D A ++
Sbjct: 527 KVGDIDTAKEI 537
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 98/238 (41%), Gaps = 12/238 (5%)
Query: 335 GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYI--PILKAYCKENRTAEATILVMEIS 392
++ + V +G + A + E++ G VG+ VY ++ A CK+ + + + ++
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEISRSG--VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ 262
Query: 393 SSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPE 452
G+ D+ TY+ LI S + AF L M +Y T++ GL ++ + E
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 453 LMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSL 512
E++ + + + S++ CK G + + + F M P+ + S+
Sbjct: 323 RAKEVFAEMLRSG-LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 513 INGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQV 570
++ + + LM +N VK G+ D+ + + + G AM +
Sbjct: 382 MSLFTRSGNLDKALMYFNSVK-------EAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 147/352 (41%), Gaps = 33/352 (9%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 239
PDV ++G C + V DA ++ M G+ PD +T+ L A G +E++ E
Sbjct: 421 PDVINYTTLIDGYCLQ-GKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLE 479
Query: 240 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMES--TILRSLSDEDRKDWNFGGETFCA 297
+ M G V S +I G + + E + L E++ + G +C
Sbjct: 480 IYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKG---YC- 535
Query: 298 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 357
+ L K K L +K IK S+ C+ G +KAH +L +M+
Sbjct: 536 --EAGLSKKAYKAFVRLEYPLRK--SVYIKLFFSL-------CIE-GYLEKAHDVLKKMS 583
Query: 358 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 417
A G + ++ A+CK N EA +L + GL D+ TY +I T + Q
Sbjct: 584 AYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQ 643
Query: 418 SAFSLFRDMREARV-PDLKGSYLTIMTGLM----ENH-----RPELMAAFLDEVVGD--- 464
A SLF DM++ + PD+ +Y ++ + E+H + E+ EV+ +
Sbjct: 644 KAESLFEDMKQRGIKPDVV-TYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSA 702
Query: 465 PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
I + + +I CK LE A F RM EP+ Y +LI+ Y
Sbjct: 703 AGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSY 754
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 131/324 (40%), Gaps = 33/324 (10%)
Query: 209 MSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVF-YSNLISGYVKSG 267
+ LG+ +E T+ + VK L K N E M N+ VF Y I+G +G
Sbjct: 207 LKQLGLCANEYTYAIV-----VKALCRKGNLEEAAM--LLIENESVFGYKTFINGLCVTG 259
Query: 268 NLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 327
+ IL + DRK G+ AV+ +R G N + K S I
Sbjct: 260 ETEKAVALILELI---DRK--YLAGDDLRAVLGMVVR-----GFCNEMK--MKAAESVII 307
Query: 328 ADNSIGYGI-VNACVS--------MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKE 378
IG+G+ V AC++ M L + A LD+M G V + IL+ YCK
Sbjct: 308 EMEEIGFGLDVYACLAVIDRYCKNMNLPE-ALGFLDKMLGKGLKVNCVIVSLILQCYCKM 366
Query: 379 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE-ARVPDLKGS 437
+ EA E + LD Y+ + + AF L ++M++ VPD+ +
Sbjct: 367 DMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVI-N 425
Query: 438 YLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRM 497
Y T++ G + +DE++G+ + +N ++ + G E+ + RM
Sbjct: 426 YTTLIDGYCLQGKVVDALDLIDEMIGNG-MSPDLITYNVLVSGLARNGHEEEVLEIYERM 484
Query: 498 NFLQFEPNDQTYLSLINGYVSAEK 521
+PN T +I G A K
Sbjct: 485 KAEGPKPNAVTNSVIIEGLCFARK 508
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 145/358 (40%), Gaps = 44/358 (12%)
Query: 193 CCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNK 252
C + +V +A R + L + P TF L + A E + L+ E G +
Sbjct: 446 CKKQRAVKEAFR----FTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTAD 501
Query: 253 KVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE----TFCAVVKEYLRKGNI 308
Y+ LIS KSG + +M + +S N G E TF A++ R G +
Sbjct: 502 CKLYTTLISSCAKSGKVDAM-FEVFHQMS-------NSGVEANLHTFGALIDGCARAGQV 553
Query: 309 KGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALG-----GSV 363
A L N+K D + +++AC G D+A +L EM A +
Sbjct: 554 ---AKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHI 610
Query: 364 GLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF 423
+G ++KA C + A + I G++ E Y + + S D+ A S++
Sbjct: 611 SIGA---LMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIY 667
Query: 424 RDMREARV-PD-LKGSYLTIMTGLMENHRPELMAAFLDEVVG---DPR---IEVGTHDWN 475
+DM+E V PD + S L + G A LDE G D + I +GT ++
Sbjct: 668 KDMKEKDVTPDEVFFSALIDVAG---------HAKMLDEAFGILQDAKSQGIRLGTISYS 718
Query: 476 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 533
S++ A C A + A + ++ ++ P T +LI + + +++K
Sbjct: 719 SLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIK 776
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 336 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVM------ 389
+V+A + G A+ +L +M G G VY ++ + C + + +L +
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437
Query: 390 EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMEN 448
E+ ++G+ L+ + S+ ++ AFS+ R+M + +PD +Y ++ L
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD-TSTYSKVLNYLCNA 496
Query: 449 HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 508
+ EL A L E + + + + ++ +FCKAG +E AR+ F M + PN T
Sbjct: 497 SKMEL-AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 509 YLSLINGYVSAEK 521
Y +LI+ Y+ A+K
Sbjct: 556 YTALIHAYLKAKK 568
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 19/240 (7%)
Query: 299 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 358
V YL + LA L+ E K + AD +V++ GL ++A +EM
Sbjct: 489 VLNYLCNASKMELAFLLFEEMK--RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 359 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 418
+G + + Y ++ AY K + + A L + S G ++ TY ALI+ + +
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 419 AFSLFRDMREAR-VPDLKG---------------SYLTIMTGLMENHRPELMAAFLDEVV 462
A +F M ++ VPD+ +Y ++ G ++HR E LD +
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 463 GDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKH 522
+ E ++++I CK G+L++A+ M+ F TY SLI+ Y ++
Sbjct: 667 MEG-CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 158/403 (39%), Gaps = 44/403 (10%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 239
P+V + L GC + + + +RV+ M G P F L + Y G +
Sbjct: 335 PNVVTYSTLLCGCLNK-KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYK 393
Query: 240 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 299
L M + G V Y+ LI G++ + ++ L D K ++ E A V
Sbjct: 394 LLKKMVKCGHMPGYVVYNILI------GSICGDKDSLNCDLLDLAEKAYS---EMLAAGV 444
Query: 300 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG----------IVNACVSMGLSDKA 349
L K N+ + A K E + IG G ++N + + A
Sbjct: 445 --VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 350 HSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIET 409
+ +EM G + Y ++ ++CK +A E+ G +V TY ALI
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562
Query: 410 SMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG----- 463
+ ++ A LF M E +P++ +Y ++ G + + E + + G
Sbjct: 563 YLKAKKVSYANELFETMLSEGCLPNIV-TYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Query: 464 DPRIEVGTHDWNS----------IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
D + +D NS ++ FCK+ R+E+AR+ M+ EPN Y +LI
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 514 NGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDH-NLVDAFL 555
+G K L +VK ++S G + + +L+D +
Sbjct: 682 DGLCKVGK----LDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 140/388 (36%), Gaps = 78/388 (20%)
Query: 194 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 253
C+ + A + M +G P+ +T+ L + Y NEL M GC
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 254 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 313
V YS LI G+ K+G + R +D D V Y ++ +
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD-----------VDMYFKQYD------ 631
Query: 314 LINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPIL 372
N + N + YG +++ ++A +LD M+ G VY ++
Sbjct: 632 ----------DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 373 KAYCKENRTAEATILVMEISSSGLQLDVETYDALIET--SMSSQDFQSAFSLFRDMREAR 430
CK + EA + E+S G + TY +LI+ + QD S
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK----------- 730
Query: 431 VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 490
+++ ++EN P + + + +I CK G+ ++A
Sbjct: 731 ----------VLSKMLENSCA-------------PNVVI----YTEMIDGLCKVGKTDEA 763
Query: 491 RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNL 550
+ + M +PN TY ++I+G+ K L L L G KG+ ++
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL-------LERMGSKGVAPNYVT 816
Query: 551 VDAFLYAMVKGGFFDAAMQVVEKSHEMK 578
+ K G D A ++E EMK
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLE---EMK 841
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 152/410 (37%), Gaps = 97/410 (23%)
Query: 179 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTF----------------- 221
+P+V A L+G C + V +A +++ MS G P+++ +
Sbjct: 636 RPNVVTYGALLDGFC-KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 222 ---------GFLGYLYAVKGL---------QEKINELEVLMGEFGCSNKKVFYSNLISGY 263
GF LY L Q+ +++ M E C+ V Y+ +I G
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754
Query: 264 VKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEP 323
K G + E+ L + +E N T+ A++ + G I+ L+ +++
Sbjct: 755 CKVGK--TDEAYKLMQMMEEKGCQPNV--VTYTAMIDGFGMIGKIETCLELL---ERMGS 807
Query: 324 SNIKADNSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTA 382
+ A N + Y + ++ C G D AH++L+EM Y +++ + KE
Sbjct: 808 KGV-APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FI 864
Query: 383 EATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR--EARVPDLKGSYLT 440
E+ L+ EI + Y LI+ + +Q + A L ++ A + D +Y
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTY-- 922
Query: 441 IMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFL 500
NS+I + C A ++E A + F M
Sbjct: 923 ----------------------------------NSLIESLCLANKVETAFQLFSEMTKK 948
Query: 501 QFEPNDQTYLSLINGYVSAEKHFNVLML----------WNDVKRKLSSDG 540
P Q++ SLI G K L+L W ++ K +SDG
Sbjct: 949 GVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQW--IEEKKTSDG 996
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 154/368 (41%), Gaps = 61/368 (16%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 239
P V + N + G C + S+ +A + M+ GV PD +T+ L + + G+ E
Sbjct: 255 PSVYSHNILINGLCL-VGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWE 313
Query: 240 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 299
+ M + G S + Y+ L+ G + GN+ M +L+ D + + C+V+
Sbjct: 314 VIRDMLDKGLSPDVITYTILLCGQCQLGNI-DMGLVLLK---DMLSRGFELNSIIPCSVM 369
Query: 300 KEYLRK-GNIKGLANLINE--AQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDE 355
L K G I +L N+ A L P + + Y IV + +G D A + DE
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSP------DLVAYSIVIHGLCKLGKFDMALWLYDE 423
Query: 356 M---NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 412
M L S G +L C++ EA L+ + SSG LD+ Y+ +I+
Sbjct: 424 MCDKRILPNSRTHG---ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 413 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 472
S + A LF+ + I TG+ + +A F
Sbjct: 481 SGCIEEALELFK--------------VVIETGITPS-----VATF--------------- 506
Query: 473 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 532
NS+I+ +CK + +AR+ + P+ +Y +L++ Y + ++ +++
Sbjct: 507 --NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI----DEL 560
Query: 533 KRKLSSDG 540
+R++ ++G
Sbjct: 561 RREMKAEG 568
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 155/379 (40%), Gaps = 60/379 (15%)
Query: 195 ELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVL---MGEFGCSN 251
+L + AERV+ +S +G P+ +++ L Y G K N E + M G
Sbjct: 151 KLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGG---KCNNAEAIFRRMQSSGPEP 207
Query: 252 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 311
+ Y ++ +V+ E + +L DE + + + ++ Y + GN +
Sbjct: 208 SAITYQIILKTFVEGDKFKEAEE-VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE-- 264
Query: 312 ANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS-ILDEMNALGGSVGLGVYIP 370
+A+K+ S + N+ +S S K S I D+M + Y
Sbjct: 265 -----KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYAL 319
Query: 371 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 430
++KAY + R EA + E+ +G++ + Y+ L++ S + A ++F+ MR R
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379
Query: 431 V-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 489
+ PDL SY T+++ A+ A +E
Sbjct: 380 IFPDL-WSYTTMLS------------------------------------AYVNASDMEG 402
Query: 490 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN 549
A + F+R+ FEPN TY +LI GY A ++ ++ K +LS GIK +
Sbjct: 403 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE--KMRLS-----GIKANQT 455
Query: 550 LVDAFLYAMVKGGFFDAAM 568
++ + A + F +A+
Sbjct: 456 ILTTIMDASGRCKNFGSAL 474
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 154/368 (41%), Gaps = 61/368 (16%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 239
P V + N + G C + S+ +A + M+ GV PD +T+ L + + G+ E
Sbjct: 255 PSVYSHNILINGLCL-VGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWE 313
Query: 240 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 299
+ M + G S + Y+ L+ G + GN+ M +L+ D + + C+V+
Sbjct: 314 VIRDMLDKGLSPDVITYTILLCGQCQLGNI-DMGLVLLK---DMLSRGFELNSIIPCSVM 369
Query: 300 KEYLRK-GNIKGLANLINE--AQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDE 355
L K G I +L N+ A L P + + Y IV + +G D A + DE
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSP------DLVAYSIVIHGLCKLGKFDMALWLYDE 423
Query: 356 M---NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 412
M L S G +L C++ EA L+ + SSG LD+ Y+ +I+
Sbjct: 424 MCDKRILPNSRTHG---ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 413 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 472
S + A LF+ + I TG+ + +A F
Sbjct: 481 SGCIEEALELFK--------------VVIETGITPS-----VATF--------------- 506
Query: 473 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 532
NS+I+ +CK + +AR+ + P+ +Y +L++ Y + ++ +++
Sbjct: 507 --NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI----DEL 560
Query: 533 KRKLSSDG 540
+R++ ++G
Sbjct: 561 RREMKAEG 568
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 155/379 (40%), Gaps = 60/379 (15%)
Query: 195 ELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVL---MGEFGCSN 251
+L + AERV+ +S +G P+ +++ L Y G K N E + M G
Sbjct: 158 KLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGG---KCNNAEAIFRRMQSSGPEP 214
Query: 252 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 311
+ Y ++ +V+ E + +L DE + + + ++ Y + GN +
Sbjct: 215 SAITYQIILKTFVEGDKFKEAEE-VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE-- 271
Query: 312 ANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS-ILDEMNALGGSVGLGVYIP 370
+A+K+ S + N+ +S S K S I D+M + Y
Sbjct: 272 -----KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYAL 326
Query: 371 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 430
++KAY + R EA + E+ +G++ + Y+ L++ S + A ++F+ MR R
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386
Query: 431 V-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 489
+ PDL SY T+++ A+ A +E
Sbjct: 387 IFPDL-WSYTTMLS------------------------------------AYVNASDMEG 409
Query: 490 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN 549
A + F+R+ FEPN TY +LI GY A ++ ++ K +LS GIK +
Sbjct: 410 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE--KMRLS-----GIKANQT 462
Query: 550 LVDAFLYAMVKGGFFDAAM 568
++ + A + F +A+
Sbjct: 463 ILTTIMDASGRCKNFGSAL 481
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 131/315 (41%), Gaps = 17/315 (5%)
Query: 213 GVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFG---CSNKKVFYSNLISGYVKSGNL 269
G+ PD + FL L + G ++ EL + E G C+ V Y+ +I +S
Sbjct: 333 GLTPDVV---FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389
Query: 270 ASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA-QKLEPSNIKA 328
S S+ + + F T+ ++ Y + ++ L+ E +K P A
Sbjct: 390 VSEVSSWFDKMKADSVSPSEF---TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA 446
Query: 329 DNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILV 388
S+ +NA + A+ + E+ G+V VY ++K + K + +EA L
Sbjct: 447 YCSL----INALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLF 502
Query: 389 MEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMEN 448
E+ + G DV Y+AL+ + + A SL R M E S+ I+ G
Sbjct: 503 NEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFART 562
Query: 449 HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 508
P A + E + I+ +N+++ F AG E+A R R M FE + T
Sbjct: 563 GVPR-RAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAIT 621
Query: 509 YLSLIN--GYVSAEK 521
Y S+++ G V EK
Sbjct: 622 YSSILDAVGNVDHEK 636
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 148/387 (38%), Gaps = 37/387 (9%)
Query: 202 AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLIS 261
A R+ M + ++P E + L +Y G EK +L M GCS Y+ LI
Sbjct: 252 AIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIK 311
Query: 262 GYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQ-- 319
G K+G + L D D F + K G ++ L N+ +E
Sbjct: 312 GLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK----VGRVEELTNVFSEMGMW 367
Query: 320 KLEPSNIKADNSIGYGIVNACVSMGLSDKAH-----SILDEMNALGGSVGLGVYIPILKA 374
+ P+ + N + KAH S D+M A S Y ++
Sbjct: 368 RCTPTVVS---------YNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDG 418
Query: 375 YCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDL 434
YCK NR +A +L+ E+ G Y +LI ++ +++A LF++++E
Sbjct: 419 YCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVS 478
Query: 435 KGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGTHDWNSIIHAFCKAGRLEDAR 491
Y ++ + + +E+ P + + +N+++ KAG + +A
Sbjct: 479 SRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDV----YAYNALMSGMVKAGMINEAN 534
Query: 492 RTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLV 551
R+M + ++ ++NG+ + ++ +K H GIK D
Sbjct: 535 SLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIK-------HSGIKPDGVTY 587
Query: 552 DAFLYAMVKGGFFDAAMQVVEKSHEMK 578
+ L G F+ A +++ EMK
Sbjct: 588 NTLLGCFAHAGMFEEAARMM---REMK 611
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 7/242 (2%)
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 353
T+ A++ Y + G L +E ++ + ++ I ++ +G +KA +
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDE---MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
+EM G S + Y ++K K R EA ++ GL DV + L+
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 414 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMEN--HRPELMAAFLDEVVGDPRIEVGT 471
+ ++F +M R SY T++ L E+ H E+ +++ D++ D +
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEV-SSWFDKMKADS-VSPSE 409
Query: 472 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 531
++ +I +CK R+E A M+ F P Y SLIN A+++ L+ +
Sbjct: 410 FTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE 469
Query: 532 VK 533
+K
Sbjct: 470 LK 471
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 121/290 (41%), Gaps = 45/290 (15%)
Query: 227 LYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISG-YVKSGNLASMESTILRSLSDEDR 285
+Y +G+ + E+ LMG +G N V+ N I G VKSG ED
Sbjct: 172 VYLREGMIQDSLEIFRLMGLYG-FNPSVYTCNAILGSVVKSG---------------EDV 215
Query: 286 KDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGL 345
W+F +KE L++ +A NI ++N + G
Sbjct: 216 SVWSF--------LKEMLKRKICPDVATF----------NI---------LINVLCAEGS 248
Query: 346 SDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDA 405
+K+ ++ +M G + + Y +L YCK+ R A L+ + S G+ DV TY+
Sbjct: 249 FEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNM 308
Query: 406 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 465
LI S + L RDMR+ + + +Y T++ G + + + L+E++
Sbjct: 309 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEML-SF 367
Query: 466 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 515
+ +N++I G ++A + F M P++ +Y L++G
Sbjct: 368 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 165/437 (37%), Gaps = 60/437 (13%)
Query: 82 EAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETI 141
EA K F + + P + L+ L + +L R F M+RN + + T
Sbjct: 391 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF-DLARGF---YMRMKRNGVCVGRITY 446
Query: 142 HAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCELESVTD 201
M+D + A L+ M K+ + PD+ +A + G C ++
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGI---------DPDIVTYSALINGFC-KVGRFKT 496
Query: 202 AERVVGTMSNLGVRPDELTFGFLGYLYAVKG-LQEKINELEVLMGEFGCSNKKVFYSNLI 260
A+ +V + +G+ P+ + + L Y G L+E I E ++ E G + ++ L+
Sbjct: 497 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE-GHTRDHFTFNVLV 555
Query: 261 SGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQK 320
+ K+G +A E E++R G+
Sbjct: 556 TSLCKAGKVAEAE---------------------------EFMRCMTSDGIL-------- 580
Query: 321 LEPSNIKADNSI-GYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKEN 379
P+ + D I GYG + G KA S+ DEM +G Y +LK CK
Sbjct: 581 --PNTVSFDCLINGYG------NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 632
Query: 380 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYL 439
EA + + + +D Y+ L+ S + A SLF +M + + +Y
Sbjct: 633 HLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 692
Query: 440 TIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNF 499
++++GL + + F E + + + KAG+ + +M+
Sbjct: 693 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 752
Query: 500 LQFEPNDQTYLSLINGY 516
L P+ T ++I+GY
Sbjct: 753 LGHTPDIVTTNAMIDGY 769
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 137/336 (40%), Gaps = 13/336 (3%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 239
P V CNA L E V+ + M + PD TF L + +G EK +
Sbjct: 196 PSVYTCNAILGSVVKSGEDVS-VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSY 254
Query: 240 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 299
L M + G + V Y+ ++ Y K G + + L K + T+ ++
Sbjct: 255 LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA----IELLDHMKSKGVDADVCTYNMLI 310
Query: 300 KEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 357
+ R I L+ + +K + P+ + + ++N + G A +L+EM
Sbjct: 311 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT-----LINGFSNEGKVLIASQLLNEML 365
Query: 358 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 417
+ G S + ++ + E EA + + + GL +Y L++ + +F
Sbjct: 366 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD 425
Query: 418 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSI 477
A + M+ V + +Y ++ GL +N + L+E+ D I+ ++++
Sbjct: 426 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG-IDPDIVTYSAL 484
Query: 478 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
I+ FCK GR + A+ R+ + PN Y +LI
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 4/223 (1%)
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 353
T+ V+ Y +KG K L++ ++ + AD +++ K + +L
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDH---MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 326
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
+M Y ++ + E + A+ L+ E+ S GL + T++ALI+ +S
Sbjct: 327 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 386
Query: 414 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 473
+F+ A +F M + + SY ++ GL +N +L F + + + VG
Sbjct: 387 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG-VCVGRIT 445
Query: 474 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
+ +I CK G L++A M+ +P+ TY +LING+
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 488
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 154/385 (40%), Gaps = 36/385 (9%)
Query: 212 LGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS 271
L +R T+ L GL + ++ M G S L+S + + G L
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 272 MESTILRSLSDEDRKDWNFGGETFCAVVKEYL----RKGNIKGLANLINEAQKLEPSNIK 327
+ +L+S F E C VV L + ++ L +E + + N
Sbjct: 157 ATALLLQS----------FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-- 204
Query: 328 ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATIL 387
D ++ +G ++KA +L M+ G + Y +++ +CK N +A+ +
Sbjct: 205 -DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 388 VMEI-SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 446
++ S S DV TY ++I + + A SL DM + ++ ++ G
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 447 ENHRPELMAAFLDEVVGDPRIEVGTH----DWNSIIHAFCKAGRLEDARRTFRRMNFLQF 502
+ E++ A +E+ G I G + S+I +C+ G++ R + MN
Sbjct: 324 K--AGEMLTA--EEIRGK-MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 503 EPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN-LVDAFLYAMVKG 561
PN TY LIN + N L+ ++ +L+S F +N ++D F K
Sbjct: 379 FPNAFTYSILINALCNE----NRLLKARELLGQLASKDIIPQPFMYNPVIDGF----CKA 430
Query: 562 GFFDAAMQVVEKSHEMKIFVDKWRY 586
G + A +VE+ + K DK +
Sbjct: 431 GKVNEANVIVEEMEKKKCKPDKITF 455
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 148/374 (39%), Gaps = 42/374 (11%)
Query: 81 DEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFL----MERNPMVL 136
D A + F+ + S P L L++ + G +H FA+A+ L +E MV+
Sbjct: 120 DLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH-----FATALLLQSFEVEGCCMVV 174
Query: 137 ESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKP-DVAACNAALEGCCCE 195
S +L+++ + A L DE L F D N + G C
Sbjct: 175 NS-----LLNTLVKLDRVEDAMKL----------FDEHLRFQSCNDTKTFNILIRGLC-- 217
Query: 196 LESVTDAER---VVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINEL--EVLMGEFGCS 250
V AE+ ++G MS G PD +T+ L + K +E+ +V G CS
Sbjct: 218 --GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV-CS 274
Query: 251 NKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKG 310
V Y+++ISGY K+G + S L D R TF +V Y + G +
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSL----LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 311 LANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIP 370
+ K+ D +++ +G + + +EMNA G Y
Sbjct: 331 AEEI---RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 371 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 430
++ A C ENR +A L+ +++S + Y+ +I+ + A + +M + +
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 431 VPDLKGSYLTIMTG 444
K ++ ++ G
Sbjct: 448 CKPDKITFTILIIG 461
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 127/329 (38%), Gaps = 26/329 (7%)
Query: 101 LTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFAL 160
+ NSL+ L L + + + F + N +++T + ++ + G A A L
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN----DTKTFNILIRGLCGVGKAEKALEL 228
Query: 161 VRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELT 220
+ M +PD+ N ++G C E +E S PD +T
Sbjct: 229 LGVMSGFGC---------EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 221 FGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSL 280
+ + Y G + + L M G V ++ L+ GY K+G + + E + +
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 281 SDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGI-V 337
S D TF +++ Y R G + L E A+ + P N+ Y I +
Sbjct: 340 SFGCFPDV----VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFP------NAFTYSILI 389
Query: 338 NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQ 397
NA + KA +L ++ + +Y P++ +CK + EA ++V E+ +
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 398 LDVETYDALIETSMSSQDFQSAFSLFRDM 426
D T+ LI A S+F M
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKM 478
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 154/385 (40%), Gaps = 36/385 (9%)
Query: 212 LGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS 271
L +R T+ L GL + ++ M G S L+S + + G L
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 272 MESTILRSLSDEDRKDWNFGGETFCAVVKEYL----RKGNIKGLANLINEAQKLEPSNIK 327
+ +L+S F E C VV L + ++ L +E + + N
Sbjct: 157 ATALLLQS----------FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-- 204
Query: 328 ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATIL 387
D ++ +G ++KA +L M+ G + Y +++ +CK N +A+ +
Sbjct: 205 -DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 388 VMEI-SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 446
++ S S DV TY ++I + + A SL DM + ++ ++ G
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 447 ENHRPELMAAFLDEVVGDPRIEVGTH----DWNSIIHAFCKAGRLEDARRTFRRMNFLQF 502
+ E++ A +E+ G I G + S+I +C+ G++ R + MN
Sbjct: 324 K--AGEMLTA--EEIRGK-MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 503 EPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN-LVDAFLYAMVKG 561
PN TY LIN + N L+ ++ +L+S F +N ++D F K
Sbjct: 379 FPNAFTYSILINALCNE----NRLLKARELLGQLASKDIIPQPFMYNPVIDGF----CKA 430
Query: 562 GFFDAAMQVVEKSHEMKIFVDKWRY 586
G + A +VE+ + K DK +
Sbjct: 431 GKVNEANVIVEEMEKKKCKPDKITF 455
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 148/374 (39%), Gaps = 42/374 (11%)
Query: 81 DEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFL----MERNPMVL 136
D A + F+ + S P L L++ + G +H FA+A+ L +E MV+
Sbjct: 120 DLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH-----FATALLLQSFEVEGCCMVV 174
Query: 137 ESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKP-DVAACNAALEGCCCE 195
S +L+++ + A L DE L F D N + G C
Sbjct: 175 NS-----LLNTLVKLDRVEDAMKL----------FDEHLRFQSCNDTKTFNILIRGLC-- 217
Query: 196 LESVTDAER---VVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINEL--EVLMGEFGCS 250
V AE+ ++G MS G PD +T+ L + K +E+ +V G CS
Sbjct: 218 --GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV-CS 274
Query: 251 NKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKG 310
V Y+++ISGY K+G + S L D R TF +V Y + G +
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSL----LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 311 LANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIP 370
+ K+ D +++ +G + + +EMNA G Y
Sbjct: 331 AEEI---RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 371 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 430
++ A C ENR +A L+ +++S + Y+ +I+ + A + +M + +
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 431 VPDLKGSYLTIMTG 444
K ++ ++ G
Sbjct: 448 CKPDKITFTILIIG 461
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 127/329 (38%), Gaps = 26/329 (7%)
Query: 101 LTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFAL 160
+ NSL+ L L + + + F + N +++T + ++ + G A A L
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN----DTKTFNILIRGLCGVGKAEKALEL 228
Query: 161 VRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELT 220
+ M +PD+ N ++G C E +E S PD +T
Sbjct: 229 LGVMSGFGC---------EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 221 FGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSL 280
+ + Y G + + L M G V ++ L+ GY K+G + + E + +
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 281 SDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGI-V 337
S D TF +++ Y R G + L E A+ + P N+ Y I +
Sbjct: 340 SFGCFPDV----VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFP------NAFTYSILI 389
Query: 338 NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQ 397
NA + KA +L ++ + +Y P++ +CK + EA ++V E+ +
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 398 LDVETYDALIETSMSSQDFQSAFSLFRDM 426
D T+ LI A S+F M
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKM 478
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 134/321 (41%), Gaps = 21/321 (6%)
Query: 227 LYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDED-- 284
+Y+ G K EL M + GC + ++ LI+ +KSG L + L +
Sbjct: 234 VYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGL 293
Query: 285 RKDWNFGGETFCAVVKEYLRKGNIKGLANLIN--EAQKLEPSNIKADNSIGYGIVNACVS 342
R D T+ ++ R N+ G + EA + +P + I + C
Sbjct: 294 RPD----AITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMI--SVYGRC-- 345
Query: 343 MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVET 402
GL+ +A + E+ G Y +L A+ +E T + + ++ G D T
Sbjct: 346 -GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 403 YDALIETSMSSQDFQSAFSLFRDMR--EARVPDLKGSYLTIMTGLMENHRPELMAAFLDE 460
Y+ +I A L++DM+ R PD +Y ++ L + +R AA + E
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD-AITYTVLIDSLGKANRTVEAAALMSE 463
Query: 461 VVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAE 520
++ D I+ ++++I + KAG+ E+A TF M +P++ Y +++ +
Sbjct: 464 ML-DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGN 522
Query: 521 KHFNVLMLWNDVKRKLSSDGH 541
+ L+ D + SDGH
Sbjct: 523 ETRKAWGLYRD----MISDGH 539
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 140/348 (40%), Gaps = 56/348 (16%)
Query: 192 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEK----INELEVLMGEF 247
CC E +A +V + G E + +Y G E +N+ E F
Sbjct: 690 CCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHF 749
Query: 248 GCSNKKVFYSNLISGYVKSGNLASMESTI--LR-SLSDEDRKDWNFGGETFCAVVKEYLR 304
CS Y+++I Y K ES + LR S D K WN +++ Y +
Sbjct: 750 ACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN-------SLMSAYAQ 799
Query: 305 KGNIKGLANLINEAQKLEPS-NIKADNSIG------------YGIVNACVSMGLSDKAHS 351
G + + N + PS +++ N + Y +V MG S
Sbjct: 800 CGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSS 859
Query: 352 ILDEMNALG------------GSVGLGVYIPILKAY-------CKENRTAEATILVMEIS 392
IL ++A S+ Y+P ++ Y CK R +A I+V E+
Sbjct: 860 ILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEME 919
Query: 393 SSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPE 452
+ ++++ ++++++ + +D++ +++ ++E + + +Y T++ + RPE
Sbjct: 920 EANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPE 979
Query: 453 ---LMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRM 497
L+ + + DP+++ + S+I AF K LE A + F +
Sbjct: 980 EGYLLMQQMRNLGLDPKLDT----YKSLISAFGKQKCLEQAEQLFEEL 1023
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 135/342 (39%), Gaps = 49/342 (14%)
Query: 178 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 237
++P++ NA ++ C + M GV+PD +TF L + + GL E
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 238 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 297
L M Y+ L+ K G + D F
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM-----------------DLAF------- 394
Query: 298 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEM 356
E L + +K ++ P N + Y +++ G D+A ++ EM
Sbjct: 395 ---EILAQMPVK----------RIMP------NVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Query: 357 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 416
LG ++ Y +L Y K R+ EA ++ E++S G++ DV TY+AL+ +
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495
Query: 417 QSAFSLFRDM-REARVPDLKGSYLTIMTGLMENH-RPELMAAFLDEVVGDPRIEVGTHDW 474
+F +M RE +P+L +Y T++ G + E M F + R +V +
Sbjct: 496 DEVKKVFTEMKREHVLPNLL-TYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVL--Y 552
Query: 475 NSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
+++I A CK G + A M PN TY S+I+ +
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 107/250 (42%), Gaps = 11/250 (4%)
Query: 358 ALGGSVGLGVYI--PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIET-SMSSQ 414
A G G VY ++ AY + EA + + GL+ ++ TY+A+I+
Sbjct: 259 AFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM 318
Query: 415 DFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDW 474
+F+ F +M+ V + ++ +++ E DE+ + RIE +
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT-NRRIEQDVFSY 377
Query: 475 NSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKR 534
N+++ A CK G+++ A +M + PN +Y ++I+G+ A + L L+ +++
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR- 436
Query: 535 KLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETH 594
+ GI D + L K G + A+ ++ + + I D Y
Sbjct: 437 ------YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 595 KKLKVAKLRK 604
K+ K +++K
Sbjct: 491 KQGKYDEVKK 500
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 150/356 (42%), Gaps = 29/356 (8%)
Query: 228 YAVKG-LQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE--- 283
Y KG +QE +N E M + C Y+ ++S V SG +R + D
Sbjct: 86 YGRKGKVQEAVNVFE-RMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR-MRDRGIT 143
Query: 284 -DRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACV 341
D + ++FC + + ++ L N+ ++ ++ N + Y +V
Sbjct: 144 PDVYSFTIRMKSFCKTSRPH---AALRLLNNMSSQGCEM--------NVVAYCTVVGGFY 192
Query: 342 SMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVE 401
+ + + +M A G S+ L + +L+ CK+ E L+ ++ G+ ++
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLF 252
Query: 402 TYDALIETSMSSQDFQSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMENHRPELMAAFLDE 460
TY+ I+ + A + + E PD+ +Y ++ GL +N + + +L +
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI-TYNNLIYGLCKNSKFQEAEVYLGK 311
Query: 461 VVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAE 520
+V + +E ++ +N++I +CK G ++ A R F F P+ TY SLI+G
Sbjct: 312 MVNEG-LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG 370
Query: 521 KHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHE 576
+ L L+N+ KGIK + L + + + G A Q+ + E
Sbjct: 371 ETNRALALFNEAL-------GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 160/404 (39%), Gaps = 65/404 (16%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEKI 237
P++ N ++G C + + A R+VG + G +PD +T+ L Y GL K
Sbjct: 249 PNLFTYNLFIQGLC-QRGELDGAVRMVGCLIEQGPKPDVITYNNLIY-----GLCKNSKF 302
Query: 238 NELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET 294
E EV +G+ G Y+ LI+GY K G + E R + D + T
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE----RIVGDAVFNGFVPDQFT 358
Query: 295 FCAVVKEYLRKGNIKGLANLINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSI 352
+ +++ +G L NEA + ++P N+ N++ G+ N G+ +A +
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKP-NVILYNTLIKGLSNQ----GMILEAAQL 413
Query: 353 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 412
+EM+ G + + ++ CK ++A LV + S G D+ T++ LI +
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
Query: 413 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 472
++A E++ LD V DP + +
Sbjct: 474 QLKMENAL-------------------------------EILDVMLDNGV-DPDV----Y 497
Query: 473 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 532
+NS+++ CK + ED T++ M PN T+ L+ K L L ++
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 533 KRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHE 576
K K S + F L+D F K G D A + K E
Sbjct: 558 KNK--SVNPDAVTFG-TLIDGF----CKNGDLDGAYTLFRKMEE 594
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 138/338 (40%), Gaps = 35/338 (10%)
Query: 227 LYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRK 286
+Y GL E+ E+ + EFGC Y++++ + N M + R D R
Sbjct: 120 VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGE-NRIQMIYMVYR---DMKRD 175
Query: 287 DWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKA-DNSIGYG-IVNACVSMG 344
+ T+ ++K + + G L+ +E SN +++ Y ++++ +G
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLL-----VEMSNKGCCPDAVSYTTVISSMCEVG 230
Query: 345 LSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYD 404
L + + + + + VY ++ CKE+ A L+ E+ G+ +V +Y
Sbjct: 231 LVKEGRELAERFEPV-----VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 405 ALIETSMSSQDFQSAFSLFRDM-REARVPDL-------KGSYLTIMTGLMENHRPELMAA 456
LI +S + AFS M + P++ KG +L T + +++
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 457 FLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
F ++ +N+++ FC G + A F M + PN +TY SLING+
Sbjct: 346 F--------GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Query: 517 VSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAF 554
+ +WN + L+S + N+V+A
Sbjct: 398 AKRGSLDGAVYIWN---KMLTSGCCPNVVVYTNMVEAL 432
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 155/376 (41%), Gaps = 22/376 (5%)
Query: 173 EKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG 232
E E +P V+ NA + G C E A ++ M G+ P+ +++ L + G
Sbjct: 237 ELAERFEPVVSVYNALINGLCKE-HDYKGAFELMREMVEKGISPNVISYSTLINVLCNSG 295
Query: 233 LQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGG 292
E M + GC S+L+ G G T +L ++ FG
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRG-------TTFDALDLWNQMIRGFGL 348
Query: 293 E----TFCAVVKEYLRKGNIKGLANLINEAQKLEPS-NIKADNSIGYGIVNACVSMGLSD 347
+ + +V+ + GNI ++ + +++ S NI+ S+ +N G D
Sbjct: 349 QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL----INGFAKRGSLD 404
Query: 348 KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALI 407
A I ++M G + VY +++A C+ ++ EA L+ +S V T++A I
Sbjct: 405 GAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 464
Query: 408 ETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR 466
+ + A +FR M ++ R P +Y ++ GL + +R E E+
Sbjct: 465 KGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG- 523
Query: 467 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV---SAEKHF 523
+E + +N+++H C AG A + +M P++ T +I Y AE+
Sbjct: 524 VEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAA 583
Query: 524 NVLMLWNDVKRKLSSD 539
+L L + +RK D
Sbjct: 584 QMLDLVSCGRRKWRPD 599
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 14/242 (5%)
Query: 344 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 403
G DK +L +M LG Y ++ +C++ + A L + SGLQ +V T+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 404 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 463
+ LI + Q A +F +M+ V +Y T++ G + E+ F +++V
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 464 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV---SAE 520
+ I+ +N++I CK + A + + ++ PN T+ +LI G +A+
Sbjct: 372 NG-IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNAD 430
Query: 521 KHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIF 580
+ F + K + S H + + LV AF + FD A QV+ + I
Sbjct: 431 RGFEL------YKSMIRSGCHPNEQTFNMLVSAF----CRNEDFDGASQVLREMVRRSIP 480
Query: 581 VD 582
+D
Sbjct: 481 LD 482
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 97/243 (39%), Gaps = 45/243 (18%)
Query: 367 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 426
V+ + K + + AT M++ G VE+ +A + + + A +R+M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 427 REARV-PDL-----------------KG-----------------SYLTIMTGLMENHRP 451
R ++ P+ KG SY T++ G E +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE--KG 287
Query: 452 ELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYL 510
L +A L ++G ++ +N++IH FC+A +L++A + F M + PN TY
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 511 SLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQV 570
+LINGY H + D+ GI+ D +A ++ + K A Q
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMV-------CNGIQRDILTYNALIFGLCKQAKTRKAAQF 400
Query: 571 VEK 573
V++
Sbjct: 401 VKE 403
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 144/344 (41%), Gaps = 31/344 (9%)
Query: 100 PLTNSLITHLSSLGDIHNL--KRAFASAVFLMERNPMV-----LESETIHAMLDSMKGAN 152
P ++SL TH L H L R F SA ++ R+ +V L ++ A+L S + +
Sbjct: 110 PGSHSLETHAIVL---HTLTKNRKFKSAESIL-RDVLVNGGVDLPAKVFDALLYSYRECD 165
Query: 153 TAAPAFALVRCMF----KNRVALDEKLEFMK-----PDVAACNAALEGCCCELESVTDAE 203
+ F + F K R A D ++ MK P V +CNA + + V A
Sbjct: 166 STPRVFDSLFKTFAHLKKFRNATDTFMQ-MKDYGFLPTVESCNAYMSSLLGQ-GRVDIAL 223
Query: 204 RVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGY 263
R M + P+ T + Y G +K EL M G V Y+ LI+G+
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 264 VKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEP 323
+ G L+S + L+++ + N TF ++ + R ++ + + E ++
Sbjct: 284 CEKGLLSS--ALKLKNMMGKSGLQPNV--VTFNTLIHGFCRAMKLQEASKVFGE---MKA 336
Query: 324 SNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTA 382
N+ A N++ Y ++N G + A ++M G + Y ++ CK+ +T
Sbjct: 337 VNV-APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 383 EATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 426
+A V E+ L + T+ ALI ++ F L++ M
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 14/242 (5%)
Query: 344 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 403
G DK +L +M LG Y ++ +C++ + A L + SGLQ +V T+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 404 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 463
+ LI + Q A +F +M+ V +Y T++ G + E+ F +++V
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 464 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV---SAE 520
+ I+ +N++I CK + A + + ++ PN T+ +LI G +A+
Sbjct: 372 NG-IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNAD 430
Query: 521 KHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIF 580
+ F + K + S H + + LV AF + FD A QV+ + I
Sbjct: 431 RGFEL------YKSMIRSGCHPNEQTFNMLVSAF----CRNEDFDGASQVLREMVRRSIP 480
Query: 581 VD 582
+D
Sbjct: 481 LD 482
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 97/243 (39%), Gaps = 45/243 (18%)
Query: 367 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 426
V+ + K + + AT M++ G VE+ +A + + + A +R+M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 427 REARV-PDL-----------------KG-----------------SYLTIMTGLMENHRP 451
R ++ P+ KG SY T++ G E +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE--KG 287
Query: 452 ELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYL 510
L +A L ++G ++ +N++IH FC+A +L++A + F M + PN TY
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 511 SLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQV 570
+LINGY H + D+ GI+ D +A ++ + K A Q
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMV-------CNGIQRDILTYNALIFGLCKQAKTRKAAQF 400
Query: 571 VEK 573
V++
Sbjct: 401 VKE 403
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 144/344 (41%), Gaps = 31/344 (9%)
Query: 100 PLTNSLITHLSSLGDIHNL--KRAFASAVFLMERNPMV-----LESETIHAMLDSMKGAN 152
P ++SL TH L H L R F SA ++ R+ +V L ++ A+L S + +
Sbjct: 110 PGSHSLETHAIVL---HTLTKNRKFKSAESIL-RDVLVNGGVDLPAKVFDALLYSYRECD 165
Query: 153 TAAPAFALVRCMF----KNRVALDEKLEFMK-----PDVAACNAALEGCCCELESVTDAE 203
+ F + F K R A D ++ MK P V +CNA + + V A
Sbjct: 166 STPRVFDSLFKTFAHLKKFRNATDTFMQ-MKDYGFLPTVESCNAYMSSLLGQ-GRVDIAL 223
Query: 204 RVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGY 263
R M + P+ T + Y G +K EL M G V Y+ LI+G+
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 264 VKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEP 323
+ G L+S + L+++ + N TF ++ + R ++ + + E ++
Sbjct: 284 CEKGLLSS--ALKLKNMMGKSGLQPNV--VTFNTLIHGFCRAMKLQEASKVFGE---MKA 336
Query: 324 SNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTA 382
N+ A N++ Y ++N G + A ++M G + Y ++ CK+ +T
Sbjct: 337 VNV-APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 383 EATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 426
+A V E+ L + T+ ALI ++ F L++ M
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 1/178 (0%)
Query: 336 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 395
++N G ++A ILD M G + + Y ++ +CK + EA E+ +G
Sbjct: 274 MINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTG 333
Query: 396 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 455
L+LD Y L+ + + A L +M+ +R +Y I+ GL R E
Sbjct: 334 LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEAL 393
Query: 456 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
LD+ G + + + I++A C G LE A + M+ P+ T+ L+
Sbjct: 394 QMLDQ-WGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 130/299 (43%), Gaps = 16/299 (5%)
Query: 194 CELESVTDAERVVGTMSNLGVR-PDELTFG-FLGYLYAVKGLQEKINELEVLMGEFGCSN 251
C+ + A VV M G+ P+ +T+ + L+A +E + E ++ + G S
Sbjct: 207 CKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISP 266
Query: 252 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 311
V ++ +I+G+ ++G + + + L + N + A++ + + G I+
Sbjct: 267 DPVTFNVMINGFCRAGEVERAK----KILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEA 322
Query: 312 ANLINEAQKLEPSNIKADNSIGYGIVNACVSM-GLSDKAHSILDEMNALGGSVGLGVYIP 370
+E +K + +K D ++GY + C G +D+A +L EM A Y
Sbjct: 323 KQTFDEVKK---TGLKLD-TVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNV 378
Query: 371 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 430
IL+ E R+ EA ++ + S G+ L+ +Y ++ + + + A M E
Sbjct: 379 ILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERG 438
Query: 431 VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEV--GTHDWNSIIHAFCKAGRL 487
+ ++ ++ L E+ E+ L +G RI + G W +++ + CK +L
Sbjct: 439 IWPHHATWNELVVRLCESGYTEIGVRVL---IGFLRIGLIPGPKSWGAVVESICKERKL 494
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 10/194 (5%)
Query: 395 GLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV--PDLKGSYLTIMTGLMENHRPE 452
GLQ + ++ L++ + D AF + +M+ + + P+ +Y T+M L + R +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPN-SITYSTLMDCLFAHSRSK 249
Query: 453 LMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSL 512
++++ I +N +I+ FC+AG +E A++ M PN Y +L
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 513 INGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 572
+NG+ K +++VK+ G+K D + + G D AM+++
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKK-------TGLKLDTVGYTTLMNCFCRNGETDEAMKLLG 362
Query: 573 KSHEMKIFVDKWRY 586
+ + D Y
Sbjct: 363 EMKASRCRADTLTY 376
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 103/250 (41%), Gaps = 43/250 (17%)
Query: 324 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 383
S+IKAD I IV+ G A ++ EM+ G + Y ++ ++C R ++
Sbjct: 4 SHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSD 63
Query: 384 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 443
A L+ + + D+ T+ ALI + + A ++++M + + T +T
Sbjct: 64 ADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSI------FPTTIT 117
Query: 444 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFE 503
+NS+I FCK R++DA+R M
Sbjct: 118 ------------------------------YNSMIDGFCKQDRVDDAKRMLDSMASKGCS 147
Query: 504 PNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGF 563
P+ T+ +LINGY A++ N + ++ ++ R +GI + ++ + G
Sbjct: 148 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHR-------RGIVANTVTYTTLIHGFCQVGD 200
Query: 564 FDAAMQVVEK 573
DAA ++ +
Sbjct: 201 LDAAQDLLNE 210
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 144/354 (40%), Gaps = 56/354 (15%)
Query: 174 KLEFMKPDVAACNAALEGCCCELESV-TDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG 232
K + + PD N + CC+ S+ +A +V M G D++T+ L +Y G
Sbjct: 271 KSDGIAPDAYTYNTLI--TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY---G 325
Query: 233 LQEKINELEVLMGEF---GCSNKKVFYSNLISGYVKSGNL-ASMESTILRSLSDEDRKDW 288
+ E ++ E G S V Y++LIS Y + G L +ME + ++++ K
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME--LKNQMAEKGTKPD 383
Query: 289 NFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDK 348
F T+ ++ + R G ++ ++ E + + K + + + G +
Sbjct: 384 VF---TYTTLLSGFERAGKVESAMSIFEEMRN---AGCKPNICTFNAFIKMYGNRGKFTE 437
Query: 349 AHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 408
I DE+N G S + + +L + + +E + + E+ +G + ET++ LI
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS 497
Query: 409 TSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRI 467
F+ A +++R M +A V PDL
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTPDLS-------------------------------- 525
Query: 468 EVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 521
+N+++ A + G E + + M + +PN+ TY SL++ Y + ++
Sbjct: 526 -----TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 133/325 (40%), Gaps = 26/325 (8%)
Query: 201 DAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLI 260
+A +V+ M G P +T+ L YA G+ ++ EL+ M E G Y+ L+
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 261 SGYVKSGNLASMESTILRSLSDEDRKDWNFGGE----TFCAVVKEYLRKGNIKGLANLIN 316
SG+ ++G + S S+ +E R N G + TF A +K Y +G + + +
Sbjct: 392 SGFERAGKVESA-----MSIFEEMR---NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 317 EAQ--KLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKA 374
E L P + + + N G+ + + EM G + ++ A
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQN-----GMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 375 YCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDL 434
Y + +A + + +G+ D+ TY+ ++ ++ + + +M + R
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 435 KGSYLTIMTGLMENHRPELMAAFLDEV---VGDPRIEVGTHDWNSIIHAFCKAGRLEDAR 491
+ +Y +++ LM + +EV V +PR + +++ K L +A
Sbjct: 559 ELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL----LKTLVLVCSKCDLLPEAE 614
Query: 492 RTFRRMNFLQFEPNDQTYLSLINGY 516
R F + F P+ T S+++ Y
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIY 639
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 103/256 (40%), Gaps = 10/256 (3%)
Query: 319 QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKE 378
+K++ I D ++ C L +A + +EM A G S Y +L Y K
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 379 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGS 437
+R EA ++ E+ +G + TY++LI A L M E PD+ +
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV-FT 386
Query: 438 YLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRM 497
Y T+++G + E + +E + + + +N+ I + G+ + + F +
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEE-MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 498 NFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYA 557
N P+ T+ +L+ + V ++ ++KR G + + + A
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR-------AGFVPERETFNTLISA 498
Query: 558 MVKGGFFDAAMQVVEK 573
+ G F+ AM V +
Sbjct: 499 YSRCGSFEQAMTVYRR 514
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 150/355 (42%), Gaps = 31/355 (8%)
Query: 124 SAVFL-MERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDV 182
S VF M+R V E ET + ++ + + A + R M V PD+
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT---------PDL 524
Query: 183 AACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVK---GLQEKINE 239
+ N L +E+V+ M + +P+ELT+ L + YA GL + E
Sbjct: 525 STYNTVL-AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAE 583
Query: 240 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 299
EV G + V L+ K L E R+ S+ + ++ T ++V
Sbjct: 584 -EVYSGVI--EPRAVLLKTLVLVCSKCDLLPEAE----RAFSELKERGFSPDITTLNSMV 636
Query: 300 KEYLRKGNI---KGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 356
Y R+ + G+ + + E + PS + NS+ Y + + G K+ IL E+
Sbjct: 637 SIYGRRQMVAKANGVLDYMKE-RGFTPS-MATYNSLMY-MHSRSADFG---KSEEILREI 690
Query: 357 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 416
A G + Y ++ AYC+ R +A+ + E+ +SG+ DV TY+ I + + F
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMF 750
Query: 417 QSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG-DPRIEVG 470
+ A + R M + + +Y +I+ G + +R + F++++ DP G
Sbjct: 751 EEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKG 805
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 131/313 (41%), Gaps = 28/313 (8%)
Query: 294 TFCAVVKEYLRKGNIKGLANLINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS 351
T+ ++ + R N+ A + N+ Q L+P +I A N + G++ S SD A
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKP-DIVAHNVMLEGLLR---SRKKSD-AIK 354
Query: 352 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 411
+ M + G + Y +++ +CK++ A ++ SGLQ D Y LI
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 412 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 471
+ + + + L ++M+E P +Y ++ + PE ++++ + IE
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN-EIEPSI 473
Query: 472 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 531
H +N I+ ++ A E R + M P+D +Y LI G + K +
Sbjct: 474 HTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKS-------RE 526
Query: 532 VKRKLSSDGHKGIK---FDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEM---KIFVDKW- 584
R L KG+K D+N A + + F+ Q + S + +IF +W
Sbjct: 527 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFA-RWA 585
Query: 585 -----RYKQAFME 592
R+KQ FME
Sbjct: 586 QMTRRRFKQRFME 598
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 5/185 (2%)
Query: 348 KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALI 407
KA S+L EM + Y +++ +C+ +A L E+ SG + T+ LI
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Query: 408 ETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV--GDP 465
+ + A ++M+ + Y +++ G + + A DEV+ GD
Sbjct: 220 DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS 279
Query: 466 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNV 525
+ +N++I FCK G+L++A F M PN TY LI+G K
Sbjct: 280 PCAI---TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 526 LMLWN 530
L L N
Sbjct: 337 LQLLN 341
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
Query: 371 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE-A 429
+L+ Y + +T A ++ + G +V ++ L++ + + A SL R+MR +
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 430 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 489
+PD+ SY T++ G E E +E+ G W +I AFCKAG++++
Sbjct: 173 LMPDV-FSYNTVIRGFCEGKELEKALELANEMKGSG-CSWSLVTWGILIDAFCKAGKMDE 230
Query: 490 ARRTFRRMNFLQFEPNDQTYLSLINGYVSA 519
A + M F+ E + Y SLI G+
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 324 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 383
S+ K D +++ C +G D SI+ EM+ LG Y I+ Y K E
Sbjct: 209 SDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEE 268
Query: 384 ATILVMEISSSGLQL-DVETYDALIETSMSSQDF---QSAFSLFRDMREARVPDLKGSYL 439
++ ++ G L DV T +++I + + ++ +S +S F+ M PD+ +
Sbjct: 269 MESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLM--GVQPDITTFNI 326
Query: 440 TIMT----GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFR 495
I++ G+ + M + +D + + T +N +I F KAGR+E FR
Sbjct: 327 LILSFGKAGMYKK-----MCSVMD-FMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFR 380
Query: 496 RMNFLQFEPNDQTYLSLINGYVSA 519
+M + +PN TY SL+N Y A
Sbjct: 381 KMKYQGVKPNSITYCSLVNAYSKA 404
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 5/186 (2%)
Query: 336 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 395
++ AC G A S+ M G + + Y ++ Y K ++ + L+ E+ S+G
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 396 LQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELM 454
+ DV TY+ LI + + A + ++ R VP ++ ++ G + R +
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTL-AFTDVIGGF--SKRGDFQ 565
Query: 455 AAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
AF L + D R++ ++++H +CKA R+E A F ++ +P+ Y +LI
Sbjct: 566 EAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Query: 514 NGYVSA 519
+GY S
Sbjct: 626 HGYCSV 631
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 5/186 (2%)
Query: 336 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 395
++ AC G A S+ M G + + Y ++ Y K ++ + L+ E+ S+G
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 396 LQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELM 454
+ DV TY+ LI + + A + ++ R VP ++ ++ G + R +
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTL-AFTDVIGGF--SKRGDFQ 565
Query: 455 AAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
AF L + D R++ ++++H +CKA R+E A F ++ +P+ Y +LI
Sbjct: 566 EAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Query: 514 NGYVSA 519
+GY S
Sbjct: 626 HGYCSV 631
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 174/474 (36%), Gaps = 114/474 (24%)
Query: 109 LSSLGDIHNLKRAFASAVFLMER----NPMVLES-ETIHAMLDSMKG------ANTAAPA 157
L L H LK A +++ NP V++ I ++S+ G AN AA
Sbjct: 420 LKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVG 479
Query: 158 FALVR---CMFKNRVALDEKLEFM-----KPDVAACNAALEGCCCELESVTDAERVVGTM 209
A+V C +N +A ++E M P + N+ ++ C + + D +V +
Sbjct: 480 LAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIK-CLFQENIIEDLASLVNII 538
Query: 210 SNLGVRPDELTFGFLGYLYAVKGLQEKINELEVL-----MGEFGCSNKKVFYSNLISGYV 264
L PD T YL V L +K + M E G YS++I
Sbjct: 539 QELDFVPDVDT-----YLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLG 593
Query: 265 KSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQK--LE 322
K G + E T + L + D + ++ Y R G I L+ E K L
Sbjct: 594 KQGRVVEAEETFAKMLESGIQPDEI----AYMIMINTYARNGRIDEANELVEEVVKHFLR 649
Query: 323 PSNIKADNSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRT 381
PS S Y + ++ V MG+ +K LD+M
Sbjct: 650 PS------SFTYTVLISGFVKMGMMEKGCQYLDKM------------------------- 678
Query: 382 AEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTI 441
GL +V Y ALI + DF+ +F+LF M E + +Y+T+
Sbjct: 679 ----------LEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITL 728
Query: 442 MTGL-------------MENHRPELMA---------------------AFLDEVVGDPRI 467
++GL +E + +L+ +F EV+G +
Sbjct: 729 LSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKK 788
Query: 468 EVGTHDW--NSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 519
+ + + N+II +C AGRL++A M PN TY L+ ++ A
Sbjct: 789 SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEA 842
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 22/245 (8%)
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 353
++ +V+K ++ I+ LA+L+N Q+L+ D +VN D A +I+
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELD---FVPDVDTYLIVVNELCKKNDRDAAFAII 570
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
D M LG + +Y I+ + K+ R EA ++ SG+Q D Y +I T +
Sbjct: 571 DAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARN 630
Query: 414 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVG 470
A L ++ + + +Y +++G ++ E +LD+++ D P + +
Sbjct: 631 GRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVL- 689
Query: 471 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWN 530
+ ++I F K G + + F M + + Y++L++G LW
Sbjct: 690 ---YTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSG------------LWR 734
Query: 531 DVKRK 535
+ RK
Sbjct: 735 AMARK 739
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/460 (20%), Positives = 172/460 (37%), Gaps = 63/460 (13%)
Query: 99 KPLTNSLITHLSSLGDIHNLKRAFASAVFLMER----NPMVLESETIHAMLDSMKGANTA 154
+P I S+ I + R F + L+E NP ++E E ++ A+
Sbjct: 140 QPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMV 199
Query: 155 APAFALVRCMFKNRVALDEKLEF-MKPDVAACNAALEGCCCELESVTDAERVVGTMS-NL 212
A + LDE +F +PD L+ C + SV DA ++ M
Sbjct: 200 KKAIEV----------LDEMPKFGFEPDEYVFGCLLDALC-KHGSVKDAAKLFEDMRMRF 248
Query: 213 GVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASM 272
V T G+ K ++ K + V M E G V Y+NL+SGY +G +A
Sbjct: 249 PVNLRYFTSLLYGWCRVGKMMEAKY--VLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 306
Query: 273 ESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSI 332
L D R+ + + +++ + ++ + E ++ E +AD
Sbjct: 307 YDL----LRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYE---CEADVVT 359
Query: 333 GYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEIS 392
+V+ G DK + +LD+M G Y+ I+ A+ K+ E L+ ++
Sbjct: 360 YTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMR 419
Query: 393 SSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLME----- 447
D+ Y+ +I + + + A L+ +M E + +++ ++ GL
Sbjct: 420 QIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLL 479
Query: 448 ---NHRPEL-------------MAAFLDEVVGDPRIEVGTHDWNSI-------------- 477
+H E+ + L+ V+ D ++E+ W+ I
Sbjct: 480 EASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWT 539
Query: 478 --IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 515
IHA G ++A M + F P T+ L+ G
Sbjct: 540 IWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKG 579
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 127/326 (38%), Gaps = 56/326 (17%)
Query: 199 VTDAERVVGTMSNLGVRPDELTFG-FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYS 257
V A V+ M G PDE FG L L +++ E + F + + +++
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLR--YFT 256
Query: 258 NLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE 317
+L+ G+ + G + + +++ +NE
Sbjct: 257 SLLYGWCRVGKMMEAKYVLVQ------------------------------------MNE 280
Query: 318 AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 377
A EP + N + G NA G A+ +L +M G Y +++A CK
Sbjct: 281 AG-FEPDIVDYTNLLS-GYANA----GKMADAYDLLRDMRRRGFEPNANCYTVLIQALCK 334
Query: 378 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKG 436
+R EA + +E+ + DV TY AL+ + + DM ++ +P
Sbjct: 335 VDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMP---- 390
Query: 437 SYLTIMTGLMENHRPELMAAFLDEVVGDPRIE----VGTHDWNSIIHAFCKAGRLEDARR 492
S LT M ++ + + E L+ + +IE +G +N +I CK G +++A R
Sbjct: 391 SELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGI--YNVVIRLACKLGEVKEAVR 448
Query: 493 TFRRMNFLQFEPNDQTYLSLINGYVS 518
+ M P T++ +ING S
Sbjct: 449 LWNEMEENGLSPGVDTFVIMINGLAS 474
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 347 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 406
D+ + ++ A G + Y ++KA CK RT EA IL E+ S GL+ V TY+++
Sbjct: 596 DRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSM 655
Query: 407 IETSMSSQDFQSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 465
I+ + S M E + PD+ +Y +++ GL + RP +E+ G
Sbjct: 656 IDGWCKEGEIDRGLSCIVRMYEDEKNPDVI-TYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Query: 466 ----RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 509
RI + ++I CK G +A FR M + EP+ Y
Sbjct: 715 CYPNRIT-----FMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 3/166 (1%)
Query: 371 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REA 429
++K C+ R +A + +++ G + A I+ + ++ LFRD+
Sbjct: 550 LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANG 609
Query: 430 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 489
PD+ +Y ++ L + R +E+V ++ +NS+I +CK G ++
Sbjct: 610 HCPDVI-AYHVLIKALCKACRTMEADILFNEMVSKG-LKPTVATYNSMIDGWCKEGEIDR 667
Query: 490 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 535
RM + P+ TY SLI+G ++ + + WN++K K
Sbjct: 668 GLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGK 713
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 131/313 (41%), Gaps = 28/313 (8%)
Query: 294 TFCAVVKEYLRKGNIKGLANLINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS 351
T+ ++ + R N+ A + N+ L+P +I A N + G++ SM SD A
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKP-DIVAHNVMLEGLLR---SMKKSD-AIK 353
Query: 352 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 411
+ M + G + Y +++ +CK++ A ++ SGLQ D Y LI
Sbjct: 354 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 413
Query: 412 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 471
+ + + + L ++M+E P +Y ++ + PE ++++ + IE
Sbjct: 414 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN-EIEPSI 472
Query: 472 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 531
H +N I+ ++ A E R + M P+D +Y LI G +S K +
Sbjct: 473 HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS-------RE 525
Query: 532 VKRKLSSDGHKGIK---FDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEM---KIFVDKW- 584
R L KG+K D+N A + + F+ Q + S + +IF +W
Sbjct: 526 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFA-RWA 584
Query: 585 -----RYKQAFME 592
R KQ FME
Sbjct: 585 QMTRRRCKQRFME 597
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 131/313 (41%), Gaps = 28/313 (8%)
Query: 294 TFCAVVKEYLRKGNIKGLANLINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS 351
T+ ++ + R N+ A + N+ L+P +I A N + G++ SM SD A
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKP-DIVAHNVMLEGLLR---SMKKSD-AIK 354
Query: 352 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 411
+ M + G + Y +++ +CK++ A ++ SGLQ D Y LI
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 412 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 471
+ + + + L ++M+E P +Y ++ + PE ++++ + IE
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN-EIEPSI 473
Query: 472 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 531
H +N I+ ++ A E R + M P+D +Y LI G +S K +
Sbjct: 474 HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS-------RE 526
Query: 532 VKRKLSSDGHKGIK---FDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEM---KIFVDKW- 584
R L KG+K D+N A + + F+ Q + S + +IF +W
Sbjct: 527 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFA-RWA 585
Query: 585 -----RYKQAFME 592
R KQ FME
Sbjct: 586 QMTRRRCKQRFME 598
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 14/292 (4%)
Query: 301 EYL-RKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNAL 359
E+L R N+ N + ++ +K + ++ + + GL ++ + M +
Sbjct: 108 EFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQM 167
Query: 360 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSS-GLQLDVETYDALIETSMSSQDFQS 418
G S + + +L K RT A L E+ + G+ D T++ LI +
Sbjct: 168 GISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDE 227
Query: 419 AFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR-IEVGTHDWNS 476
AF +F+DM PD+ +Y TI+ GL + ++ L ++ + + +
Sbjct: 228 AFRIFKDMELYHCNPDVV-TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTT 286
Query: 477 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKL 536
++ +C +++A F M +PN TY +LI G A + ++++K L
Sbjct: 287 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR-------YDEIKDIL 339
Query: 537 --SSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 586
+D D + + A G DAAM+V ++ MK+ D Y
Sbjct: 340 IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 103/244 (42%), Gaps = 15/244 (6%)
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 353
TF +++ L++G +L +E ++ + D+ ++N + D+A I
Sbjct: 175 TFNSLLSILLKRGRTGMAHDLFDEMRR--TYGVTPDSYTFNTLINGFCKNSMVDEAFRIF 232
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRT--AEATILVMEISSSGLQLDVETYDALIETSM 411
+M + + Y I+ C+ + A + M ++ + +V +Y L+
Sbjct: 233 KDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYC 292
Query: 412 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 471
Q+ A +F DM + +Y T++ GL E HR + + L + G+
Sbjct: 293 MKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL--IGGNDAFTTFA 350
Query: 472 HD---WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI------NGYVSAEKH 522
D +N +I A C AG L+ A + F+ M ++ P+ +Y LI N + AE
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 523 FNVL 526
FN L
Sbjct: 411 FNEL 414
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 141/363 (38%), Gaps = 58/363 (15%)
Query: 201 DAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINEL-EVLMGEFGCSNKKVFYSNL 259
++ ++ TM +G+ P LTF L + +G ++L + + +G + ++ L
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215
Query: 260 ISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIK----GLANLI 315
I+G+ K+ SM R D + N T+ ++ R G +K L+ ++
Sbjct: 216 INGFCKN----SMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 316 NEAQKLEPSNIKADNSI-GYG----------IVNACVSMGLSDKAHSI------------ 352
+A + P+ + + GY + + +S GL A +
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR 331
Query: 353 LDEMN--ALGGSVGLGVYIP-------ILKAYCKENRTAEATILVMEISSSGLQLDVETY 403
DE+ +GG+ + P ++KA+C A + E+ + L D +Y
Sbjct: 332 YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Query: 404 DALIETSMSSQDFQSAFSLFRDMREARV-------PDLKGSYLTIMTGLMENHRPE---- 452
LI T +F A +LF ++ E V L +Y + L N + +
Sbjct: 392 SVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEK 451
Query: 453 LMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSL 512
+ + V DP + ++I C+ G+ + A M +F P+ +TY L
Sbjct: 452 VFRQLMKRGVQDP------PSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELL 505
Query: 513 ING 515
I+G
Sbjct: 506 IDG 508
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Query: 347 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENR-TAEATILVMEISSSGLQLDVETYDA 405
+KAH + EM G V VY ++ AY + R A T+L SS Q DV TY
Sbjct: 167 EKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSI 226
Query: 406 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 465
LI++ + F L DMR + +Y T++ + M + L +++G+
Sbjct: 227 LIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGED 286
Query: 466 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
+ + NS + AF G++E + + EPN +T+ L++ Y
Sbjct: 287 DCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSY 337
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 144/358 (40%), Gaps = 53/358 (14%)
Query: 200 TDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNL 259
+DA+++ M+ G+ P+ +T+ L +G + +L M G V ++ L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 260 ISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLR--------------- 304
+ G+ K G + +E+ L L ++D + G + +++ R
Sbjct: 275 LDGFCKLGRM--VEAFELLRLFEKD--GFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 305 KGNIK-----------GL--ANLINEAQKLEPS----NIKADNSIGYGIVNACVSMGLSD 347
K NIK GL A I +A KL S I D ++ A GL +
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 348 KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALI 407
+ S+ EM+ + ++ + C+ EA + EI SG V T++ALI
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Query: 408 ETSMSSQDFQSAFSLFRDMREARVPDL--------KGSYLTIMT--GLMENHRPELMAAF 457
+ S + + A L M R L S+ T++ +++ +R +A F
Sbjct: 451 DGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRD--LAHF 508
Query: 458 LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 515
D P I +N +I+ FC+AG ++ A + + P+ TY +LING
Sbjct: 509 AD-TGSSPDIV----SYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLING 561
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 162/423 (38%), Gaps = 70/423 (16%)
Query: 197 ESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL-QEKINELEVLMGEFGCSNKKVF 255
E + A R + M GV PD + L + + V GL ++++ + M G S
Sbjct: 72 ERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFA 131
Query: 256 YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLI 315
+ LI + K G L+ S + + D +N C GLA+
Sbjct: 132 LNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCE-----------HGLAD-- 178
Query: 316 NEAQKLEPSNIKAD---NSIGYG-IVNACVSMGLSDKAHSILDE---MNALGGSVGLGVY 368
EA + +K +++ Y +++ +G +A +++DE +N + ++ L Y
Sbjct: 179 -EAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSY 237
Query: 369 I-------------------------PILKAYCKENRTAEATILVMEISSSGLQLDVETY 403
I+ CK + E +L+ E+ + + TY
Sbjct: 238 YNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTY 297
Query: 404 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 463
L+++ + ++ A +L+ M +P Y +M GL + ++
Sbjct: 298 TTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLE 357
Query: 464 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA---E 520
D ++ + +++ CKAG L A +M PN TY S+INGYV E
Sbjct: 358 DNQVP-NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 521 KHFNVLMLWNDVKRKLSSDGHKGIKFDHNLV-DAFLYAMVKGGFFDAAMQ--VVEKSHEM 577
+ ++L RK+ D N+V + F Y V G F A + +E S EM
Sbjct: 417 EAVSLL-------RKME---------DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 578 KIF 580
++
Sbjct: 461 RLI 463
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 100/491 (20%), Positives = 192/491 (39%), Gaps = 60/491 (12%)
Query: 83 AWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETIH 142
A ++ ++ + P L NSLI + G +H+ S + +P V ++
Sbjct: 77 AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVF---ALN 133
Query: 143 AMLDSMKGANTAAPAFALVRCMFKNRVALDEKLEFMKPDVAACNAALEGCCCELESVTDA 202
++ S + A +L+R NRV + D N + G C E +A
Sbjct: 134 VLIHSFCKVGRLSFAISLLR----NRV--------ISIDTVTYNTVISGLC-EHGLADEA 180
Query: 203 ERVVGTMSNLGVRPDELTF-----GF--LGYLYAVKGLQEKINELEVLMGEFGCSNKKVF 255
+ + M +G+ PD +++ GF +G K L ++I+EL + +
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL-----------IT 229
Query: 256 YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLI 315
++ L+S Y NL ++E + D ++ TF +++ + G + L+
Sbjct: 230 HTILLSSYY---NLHAIE----EAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLL 282
Query: 316 NEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAY 375
E +E ++ ++ +V++ + A ++ +M G V L VY ++
Sbjct: 283 RE---MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGL 339
Query: 376 CKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLK 435
K EA + +V TY AL++ + D SA + M E V
Sbjct: 340 FKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNV 399
Query: 436 GSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFR 495
+Y +++ G ++ E + L + + D + + ++I KAG+ E A +
Sbjct: 400 VTYSSMINGYVKKGMLEEAVSLLRK-MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSK 458
Query: 496 RMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDH----NLV 551
M + E N+ +L+N H + +VK + KG+ D +L+
Sbjct: 459 EMRLIGVEENNYILDALVN-------HLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLI 511
Query: 552 DAFLYAMVKGG 562
D F KGG
Sbjct: 512 DVFF----KGG 518
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 136/319 (42%), Gaps = 18/319 (5%)
Query: 254 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 313
V YS++I+GYVK G L S +LR + D++ F T+ V+ + G +
Sbjct: 400 VTYSSMINGYVKKGMLEEAVS-LLRKMEDQNVVPNGF---TYGTVIDGLFKAGKEEMAIE 455
Query: 314 LINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILK 373
L E + + ++ +N I +VN +G + ++ +M + G ++ Y ++
Sbjct: 456 LSKEMRLI---GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Query: 374 AYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-P 432
+ K A E+ G+ DV +Y+ LI + + ++ ++ MRE + P
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEP 571
Query: 433 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 492
D+ ++ +M + E + D++ I+ N ++ C+ G++E+A
Sbjct: 572 DI-ATFNIMMNSQRKQGDSEGILKLWDKM-KSCGIKPSLMSCNIVVGMLCENGKMEEAIH 629
Query: 493 TFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVD 552
+M ++ PN TY ++ ++ KH ++ + LS GIK + +
Sbjct: 630 ILNQMMLMEIHPNLTTYRIFLD---TSSKHKRADAIFKTHETLLSY----GIKLSRQVYN 682
Query: 553 AFLYAMVKGGFFDAAMQVV 571
+ + K G A V+
Sbjct: 683 TLIATLCKLGMTKKAAMVM 701
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 193/481 (40%), Gaps = 76/481 (15%)
Query: 79 DTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMER------- 131
D EA K+FK L P +L+ L GD+ +SA F++ +
Sbjct: 344 DLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDL-------SSAEFIITQMLEKSVI 396
Query: 132 -NPMVLES-----------ETIHAMLDSMKGANTAAPAFA---LVRCMFK---NRVALDE 173
N + S E ++L M+ N F ++ +FK +A++
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Query: 174 KLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNL---GVRPDELTFGFLGYLYAV 230
E V N L+ L+ + + V G + ++ GV D++ + L ++
Sbjct: 457 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Query: 231 KGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNF 290
G +E M E G V Y+ LISG +K G + + DW +
Sbjct: 517 GGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGA---------------DWAY 561
Query: 291 GG----------ETFCAVVKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVN 338
G TF ++ ++G+ +G+ L ++ + ++PS + + +G N
Sbjct: 562 KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCEN 621
Query: 339 ACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVME-ISSSGLQ 397
G ++A IL++M + L Y L K R A+A E + S G++
Sbjct: 622 -----GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR-ADAIFKTHETLLSYGIK 675
Query: 398 LDVETYDALIETSMSSQDFQSAFSLFRDMREAR--VPDLKGSYLTIMTG-LMENHRPELM 454
L + Y+ LI T + A + DM EAR +PD ++ ++M G + +H + +
Sbjct: 676 LSRQVYNTLIATLCKLGMTKKAAMVMGDM-EARGFIPDTV-TFNSLMHGYFVGSHVRKAL 733
Query: 455 AAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 514
+ + V+ + I +N+II AG +++ + M P+D TY +LI+
Sbjct: 734 STY--SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALIS 791
Query: 515 G 515
G
Sbjct: 792 G 792
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 163/407 (40%), Gaps = 36/407 (8%)
Query: 194 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEF------ 247
C + V DA ++V M N G PD +TF L + G E I ELEV F
Sbjct: 173 CTIYRVIDAHKLVFDMRNRGHLPDVVTFTTL-----IGGYCE-IRELEVAHKVFDEMRVC 226
Query: 248 GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSD--EDRKDWNFGGETFCAVVKEYLRK 305
G + S LI G++K ++ + +++ L + ++ D + F +V R+
Sbjct: 227 GIRPNSLTLSVLIGGFLKMRDVETGRK-LMKELWEYMKNETDTSMKAAAFANLVDSMCRE 285
Query: 306 GNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGGSVG 364
G + + E N++ YG ++++ + A I+ M + G
Sbjct: 286 GYFNDIFEIAENMSLCESVNVE----FAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPR 341
Query: 365 LGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFR 424
Y I+ CK+ A L+ E S TY L+E+ D A ++
Sbjct: 342 RTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLE 401
Query: 425 DMREARVPDLKGSYLTIMTGLMENHRP-ELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCK 483
M D Y + GL P E++ + + GD R + + N++I+ CK
Sbjct: 402 LMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPD--EYTLNTVINGLCK 459
Query: 484 AGRLEDARRTFRRMNFLQF-EPNDQTYLSLINGYVS---AEKHFNVLMLWNDVKRKLSSD 539
GR++DA + M +F P+ T +++ G ++ AE+ +VL R + +
Sbjct: 460 MGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVL------NRVMPEN 513
Query: 540 GHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 586
K +N V L+ + KG D AM V + + + D Y
Sbjct: 514 KIKPGVVAYNAVIRGLFKLHKG---DEAMSVFGQLEKASVTADSTTY 557
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 36/260 (13%)
Query: 344 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 403
G ++A ++ EM G S GL + ++ Y + + A L+ ++ + G+ DV T+
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 404 DALIETSMSSQDFQSAFSLFRDMREARV-PDL--------KGSYLTIMTGLMENHRPELM 454
A+I + + A +FR M A V P+ S L ++ E H +
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 455 AAFLDEV-VGDPRIEV--------------------GTHDWNSIIHAFCKAGRLEDARRT 493
F+D+V VG+ +++ + WNS+I +C+AG A
Sbjct: 381 MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYEL 440
Query: 494 FRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDA 553
F RM PN T+ ++I+GY+ + D+ +++ DG ++ + +
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAM----DLFQRMEKDGK--VQRNTATWNL 494
Query: 554 FLYAMVKGGFFDAAMQVVEK 573
+ ++ G D A+++ K
Sbjct: 495 IIAGYIQNGKKDEALELFRK 514
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 59/115 (51%)
Query: 399 DVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFL 458
DV T++++I + A+ LF M++A + ++ T+++G ++N
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 459 DEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
+ D +++ T WN II + + G+ ++A FR+M F +F PN T LSL+
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 125/327 (38%), Gaps = 16/327 (4%)
Query: 213 GVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS- 271
GV P +T L G EK + L M E G S V Y+ LI G N+
Sbjct: 151 GVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKA 210
Query: 272 --MESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKAD 329
+ +T+ + +R N C K + N K L +++ +Q P +I
Sbjct: 211 LYLFNTMNKYGIRPNRVTCNIIVHALCQ--KGVIGNNNKKLLEEILDSSQANAPLDI--- 265
Query: 330 NSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVM 389
I ++++C G +A + EM+ VY I++ C A +
Sbjct: 266 -VICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMC 324
Query: 390 EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM--- 446
++ G+ DV TY+ LI F A L M+ V + SY I+ GL
Sbjct: 325 DMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHG 384
Query: 447 ENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPND 506
+ +R + + P + + WN +I + + G A M +PN
Sbjct: 385 DVNRANEFLLSMLKSSLLPEVLL----WNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNV 440
Query: 507 QTYLSLINGYVSAEKHFNVLMLWNDVK 533
T +LI+GYV + + + N+++
Sbjct: 441 YTNNALIHGYVKGGRLIDAWWVKNEMR 467
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 143/357 (40%), Gaps = 35/357 (9%)
Query: 70 TLHKSLIT-SDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFL 128
TL K L + ++ D+A F ++ + P + N ++ L G I N + +
Sbjct: 196 TLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILD 255
Query: 129 MERNPMVLESETIHAMLDS-MKGANTA-------------APAFALVR-------CMFKN 167
+ L+ ++DS K N PA ++V C N
Sbjct: 256 SSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGN 315
Query: 168 RVA-----LDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG 222
VA D + PDV N + C E +A + GTM N GV PD++++
Sbjct: 316 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKE-GKFDEACDLHGTMQNGGVAPDQISYK 374
Query: 223 FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSD 282
+ + G + NE + M + + + ++ +I GY + G+ +S S + LS
Sbjct: 375 VIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSY 434
Query: 283 EDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVS 342
+ + T A++ Y++ G + + NE + + I D + ++ A +
Sbjct: 435 GVKPN----VYTNNALIHGYVKGGRLIDAWWVKNE---MRSTKIHPDTTTYNLLLGAACT 487
Query: 343 MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLD 399
+G A + DEM G + Y +++ C + R +A L+ I ++G+ +D
Sbjct: 488 LGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITID 544
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 101/225 (44%), Gaps = 13/225 (5%)
Query: 350 HSILDEM---NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 406
S+ +EM ++ G + Y +++ K + A + SG ++D +TY+ L
Sbjct: 225 QSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNL 284
Query: 407 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAF-LDEVVGDP 465
+ ++ AF ++ M + +Y I+ L ++ R L AAF L + + +
Sbjct: 285 MMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGR--LDAAFKLFQQMKER 342
Query: 466 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNV 525
++ ++S++ + KAGRL+ + + + M P+ ++SLI+ Y A K
Sbjct: 343 KLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTA 402
Query: 526 LMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQV 570
L LW+++K+ G + + L + + K G + AM V
Sbjct: 403 LRLWDEMKK-------SGFRPNFGLYTMIIESHAKSGKLEVAMTV 440
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 135/339 (39%), Gaps = 14/339 (4%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 239
PD A C L C E V A M +LG +P+ + F L KG ++ E
Sbjct: 250 PDNATCTLILTALC-ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFE 308
Query: 240 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 299
+ M G ++ LI G K G L+ + + K T+ +++
Sbjct: 309 MLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP---NVHTYTSMI 365
Query: 300 KEYLRKGNIKGLANLIN--EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 357
Y ++ + L + + Q L P N+ ++ +N G +A+ +++ M
Sbjct: 366 GGYCKEDKLNRAEMLFSRMKEQGLFP-NVNTYTTL----INGHCKAGSFGRAYELMNLMG 420
Query: 358 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 417
G + Y + + CK++R EA L+ + S GL+ D TY LI+ D
Sbjct: 421 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 480
Query: 418 SAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 476
A + F M + D++ + + I + E F ++V + + S
Sbjct: 481 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF--QLVVSLGLIPTKETYTS 538
Query: 477 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 515
+I +CK G ++ A + F M P+ TY SLI+G
Sbjct: 539 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 114/282 (40%), Gaps = 16/282 (5%)
Query: 317 EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC 376
+ Q L PS+I + ++ V +GL + A ++ DEM+ G Y ++
Sbjct: 174 QNQGLTPSSITMN-----CVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCF 228
Query: 377 KENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 436
++ + EA + + G D T ++ + A FR M +
Sbjct: 229 RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLI 288
Query: 437 SYLTIMTGLMENHRPELMAAFLDEVVGDP-RIEVGTHDWNSIIHAFCKAGRLEDARRTFR 495
++ +++ GL + + L+E+V + + V TH ++I CK G E A R F
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH--TALIDGLCKRGWTEKAFRLFL 346
Query: 496 RM-NFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAF 554
++ ++PN TY S+I GY +K ML++ +K +G+ + N
Sbjct: 347 KLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK-------EQGLFPNVNTYTTL 399
Query: 555 LYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKK 596
+ K G F A +++ + + + Y A KK
Sbjct: 400 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKK 441
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 28/282 (9%)
Query: 211 NLGVRPDELTFGFLGYLYAVKGLQEKIN---ELEVL--MGEFGCSNKKVFYSNLISGYVK 265
++ +RP+ ++F L +KG +K + +V M E V Y++LI +
Sbjct: 179 DMRLRPNSVSFNIL-----IKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCR 233
Query: 266 SGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKL---- 321
+ ++ +S L D +K TF ++K KG NEA+KL
Sbjct: 234 NDDMGKAKSL----LEDMIKKRIRPNAVTFGLLMKGLCCKGEY-------NEAKKLMFDM 282
Query: 322 EPSNIKADNSIGYGIVNACVS-MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENR 380
E K + YGI+ + + G D+A +L EM + +Y ++ C E R
Sbjct: 283 EYRGCKP-GLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR 341
Query: 381 TAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLT 440
EA ++ E+ G + + TY +I+ +DF S ++ M +R +++
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVC 401
Query: 441 IMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFC 482
++ GL++ + A F+ EV+G + G+ W +++ C
Sbjct: 402 MVAGLIKGGNLD-HACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 109/245 (44%), Gaps = 42/245 (17%)
Query: 347 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 406
D+ + EM++LG + + ++ ++CKE++ EA + + G+ +V +++ +
Sbjct: 200 DRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMM 259
Query: 407 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR 466
I+ + + D + A L ++ + G++++ P +
Sbjct: 260 IDGACKTGDMRFALQLL-----GKMGMMSGNFVS----------PNAVT----------- 293
Query: 467 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVL 526
+NS+I+ FCKAGRL+ A R M + N++TY +L++ Y A L
Sbjct: 294 -------YNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 527 MLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 586
L +++ KG+ + + ++ +Y + G + AM V+ + + +D R+
Sbjct: 347 RLCDEMT-------SKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQID--RF 397
Query: 587 KQAFM 591
QA +
Sbjct: 398 TQAIV 402
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 9/226 (3%)
Query: 285 RKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLE-PSNIKADNSIGYGIVNACVSM 343
RK ETFC V+++Y R + N +K + P N+ A N G+++A
Sbjct: 161 RKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFN----GLLSALCKS 216
Query: 344 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 403
KA + + M + Y +L+ + KE +A + E+ +G D+ TY
Sbjct: 217 KNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTY 275
Query: 404 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY-LTIMTGLMENHRPELMAAFLDEVV 462
+++ + A + R M + Y + + T EN E + FL+
Sbjct: 276 SIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMER 335
Query: 463 GDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 508
+ +V +NS+I AFCKA R+++ R + M PN ++
Sbjct: 336 SGMKADVAV--FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKS 379
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 7/187 (3%)
Query: 332 IGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVME 390
+ Y I V+ G D+A I+ M+ +Y ++ Y ENR EA +E
Sbjct: 273 VTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLE 332
Query: 391 ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENH 449
+ SG++ DV +++LI + ++ + + ++M+ V P+ K + + +
Sbjct: 333 MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGE 392
Query: 450 RPELMAAFLDEV-VGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 508
+ E F + V +P + T +I FC+ +E A + ++ M P+ T
Sbjct: 393 KDEAFDVFRKMIKVCEPDADTYTM----VIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 448
Query: 509 YLSLING 515
+ LING
Sbjct: 449 FSVLING 455
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 372 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 431
+ +CK NR EA + E+ G + V +Y +I +F + + +M
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 432 PDLKGSYLTIMTGLMENHRPELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 490
P +Y TIM+ L N + E A + + + + +N +IH +AGRLE+A
Sbjct: 291 PPNSITYTTIMSSL--NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
Query: 491 RRTFR-RMNFLQFEPNDQTYLSLINGY 516
R FR M L N TY S+I Y
Sbjct: 349 ERVFRVEMPELGVSINTSTYNSMIAMY 375
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 372 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 431
+ +CK NR EA + E+ G + V +Y +I +F + + +M
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 432 PDLKGSYLTIMTGLMENHRPELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 490
P +Y TIM+ L N + E A + + + + +N +IH +AGRLE+A
Sbjct: 291 PPNSITYTTIMSSL--NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
Query: 491 RRTFR-RMNFLQFEPNDQTYLSLINGY 516
R FR M L N TY S+I Y
Sbjct: 349 ERVFRVEMPELGVSINTSTYNSMIAMY 375
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 351 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 410
S++D+M A + + I + Y + + EA ++ G +++ ++ +++T
Sbjct: 149 SLVDDMKA-KKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTL 207
Query: 411 MSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEV---VGDPR 466
S++ A +F M++ R PD+K SY T L+E EL +DEV + D
Sbjct: 208 SKSRNVGDAQKVFDKMKKKRFEPDIK-SY----TILLEGWGQELNLLRVDEVNREMKDEG 262
Query: 467 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFN 524
E + II+A CKA + E+A R F M +P+ + SLING + +EK N
Sbjct: 263 FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLING-LGSEKKLN 319
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 102/248 (41%), Gaps = 8/248 (3%)
Query: 276 ILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG 335
++ SL D+ + ETF + + Y R +K I K+E K ++S
Sbjct: 146 LIWSLVDDMKAKKLLSKETFALISRRYARARKVK---EAIGAFHKMEEFGFKMESSDFNR 202
Query: 336 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 395
+++ A + D+M + Y +L+ + +E + E+ G
Sbjct: 203 MLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEG 262
Query: 396 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 455
+ DV Y +I ++ ++ A F +M + + +++ GL +
Sbjct: 263 FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL 322
Query: 456 AFLD--EVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 513
F + + G P +E T +N+++ A+C + R+EDA +T M PN +TY ++
Sbjct: 323 EFFERSKSSGFP-LEAPT--YNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
Query: 514 NGYVSAEK 521
+ + ++
Sbjct: 380 HHLIRMQR 387
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 9/254 (3%)
Query: 176 EFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQE 235
+ + PD+ N + G C +L V +A++ V + G PD T+ + + +
Sbjct: 149 DLVSPDIYTFNTLVNGYC-KLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVD 207
Query: 236 KINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 295
++ M + GC +V Y+ LI G ++ + S +++ D + T+
Sbjct: 208 AAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNV----RTY 263
Query: 296 CAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 355
++ G NL +++ S IK D+ + ++ + S D+A +L+
Sbjct: 264 TVLIDALCGSGQKSEAMNLF---KQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEH 320
Query: 356 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 415
M G + Y ++K +CK+N +A L+ ++ L D+ TY+ LI SS +
Sbjct: 321 MLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGN 379
Query: 416 FQSAFSLFRDMREA 429
SA+ L M E+
Sbjct: 380 LDSAYRLLSLMEES 393
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 7/180 (3%)
Query: 344 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 403
GL ++ + EM S + + ++ YCK EA V + +G D TY
Sbjct: 134 GLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTY 193
Query: 404 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 463
+ I ++ +AF +F++M + + SY ++ GL E + + + L ++
Sbjct: 194 TSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKD 253
Query: 464 D---PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAE 520
D P + + +I A C +G+ +A F++M+ +P+D Y LI + S +
Sbjct: 254 DNCCPNVRT----YTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGD 309
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 116/289 (40%), Gaps = 60/289 (20%)
Query: 181 DVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINEL 240
D + N L G C + S +AERV M N+GV+ D ++
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVS-------------------- 304
Query: 241 EVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILR---SLSDEDRKDWNFGGETFCA 297
YS++IS Y K G+L + R + DRK +N A
Sbjct: 305 ---------------YSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYN-------A 342
Query: 298 VVKEYLRKGNIKGLANLIN---EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 354
VV + + NL+ E + +EP N+ NS+ + +++A + D
Sbjct: 343 VVHALAKASFVSEARNLMKTMEEEKGIEP-NVVTYNSL----IKPLCKARKTEEAKQVFD 397
Query: 355 EMNALGGSVGLGVYIPILKAYCKENRTAEATI-LVMEISSSGLQLDVETYDALIETSMSS 413
EM GL I A+ + RT E L+ ++ G + VETY LI
Sbjct: 398 EM----LEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRW 453
Query: 414 QDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEV 461
+DF + L+ +M+E V PDL SY+ ++ GL N + E + E+
Sbjct: 454 RDFDNVLLLWDEMKEKTVGPDL-SSYIVMIHGLFLNGKIEEAYGYYKEM 501
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 136/347 (39%), Gaps = 21/347 (6%)
Query: 256 YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLI 315
++ L+ K G + E+ +LR + + D N TF + + R + K L+
Sbjct: 237 FNMLLDALCKCGLVKEGEA-LLRRMRHRVKPDAN----TFNVLFFGWCRVRDPKKAMKLL 291
Query: 316 NEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGL---GVYIPIL 372
E + + K +N ++ G+ D+A + D M G +V + ++
Sbjct: 292 EE---MIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMI 348
Query: 373 KAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVP 432
A K ++ E L+ + S+G DV TY +IE ++ A+ +M P
Sbjct: 349 VALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 408
Query: 433 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 492
+Y + L EN + + +V + R +N +I F + + A
Sbjct: 409 PDIVTYNCFLRVLCENRKTDEALKLYGRMV-ESRCAPSVQTYNMLISMFFEMDDPDGAFN 467
Query: 493 TFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVD 552
T+ M+ + +TY ++ING + L +V +KG+K + + D
Sbjct: 468 TWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEV-------VNKGLKLPYRVFD 520
Query: 553 AFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKLKV 599
+FL + + G A +V E H K + + A E K K+
Sbjct: 521 SFLMRLSEVGNLKAIHKVSE--HMKKFYNHSMARRFALSEKRKSTKL 565
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 179/438 (40%), Gaps = 46/438 (10%)
Query: 175 LEFMKPDVAACNAALEGCCCEL-ESVTDAERVVGTMSNL---GVRPDELTFGFLGYLYAV 230
L+ M+ D + + L EL + D + + S L G+ PD + + + +Y
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 231 KGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNF 290
L + L M E G V YS L+S YV++ S + K+ N
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVF------AEMKEVNC 326
Query: 291 GGE-TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKAD---NSIGYG-IVNACVSMGL 345
+ T C ++ ++ G +++ EA +L S K D N + Y I+ L
Sbjct: 327 ALDLTTCNIMI------DVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAEL 380
Query: 346 SDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDA 405
+A + M + Y ++K Y K +AT LV E+ S G++ + TY
Sbjct: 381 FGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYST 440
Query: 406 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIM-----TGLMENHRPELMAAFLDE 460
+I + A +LF+ +R + V + Y T++ GLM + + L L +
Sbjct: 441 IISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPD 500
Query: 461 VVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPND-QTYLSLINGYVSA 519
+ PR + I KAGR E+A FR+ F E D + +IN Y
Sbjct: 501 NI--PR--------ETAITILAKAGRTEEATWVFRQA-FESGEVKDISVFGCMINLYSRN 549
Query: 520 EKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVV-EKSHEMK 578
+++ NV+ +V K+ + G+ D N++ L A K F+ A V E E
Sbjct: 550 QRYVNVI----EVFEKMRTAGYFP---DSNVIAMVLNAYGKQREFEKADTVYREMQEEGC 602
Query: 579 IFVDKWRYKQAFMETHKK 596
+F D+ ++ + + KK
Sbjct: 603 VFPDEVHFQMLSLYSSKK 620
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 22/260 (8%)
Query: 263 YVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLE 322
YV+ GN+ T L ++ + + CA+V + ++ +G A EA K+
Sbjct: 328 YVREGNM----ETTLEVVAAMRKAELKVTDCILCAIVNGFSKQ---RGFA----EAVKVY 376
Query: 323 PSNIKADNSIG---YGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKE 378
+K + G Y I +NA + +KA + DEM G + Y I+ Y K
Sbjct: 377 EWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKT 436
Query: 379 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY 438
R ++A L+ ++ G + ++ Y++LI+ + D + A ++++M+ A+V K SY
Sbjct: 437 RRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSY 496
Query: 439 LTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDW---NSIIHAFCKAGRLEDARRTFR 495
++++ N EL E+ + R+ G D ++ F K R+++ R +
Sbjct: 497 TSMISAY--NRSKELERCV--ELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQ 552
Query: 496 RMNFLQFEPNDQTYLSLING 515
M + + Y S +N
Sbjct: 553 DMKVEGTRLDARLYSSALNA 572
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 143/335 (42%), Gaps = 18/335 (5%)
Query: 204 RVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGY 263
RV M + G PD TF L Y G + +++ M G + Y+ L++
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 264 VKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGN---IKGLANLINEAQK 320
+ G+ S E+ I SD K + ++ +++ Y + GN I+ + N I E Q
Sbjct: 537 ARKGDWRSGENVI----SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQ- 591
Query: 321 LEPSNIKADNSIGYGIVN-ACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKEN 379
+ PS + + + N C ++ S++A ++ + G + ++ +L + + N
Sbjct: 592 IFPSWMLLRTLL---LANFKCRALAGSERAFTLFKKH---GYKPDMVIFNSMLSIFTRNN 645
Query: 380 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSY 438
+A ++ I GL D+ TY++L++ + + A + + + ++++ PDL SY
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLV-SY 704
Query: 439 LTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMN 498
T++ G + L E+ + I +N+ + + G + M
Sbjct: 705 NTVIKGFCRRGLMQEAVRMLSEMT-ERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
Query: 499 FLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 533
PN+ T+ +++GY A K+ + + +K
Sbjct: 764 KNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 120/300 (40%), Gaps = 15/300 (5%)
Query: 220 TFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRS 279
TF L Y GL + M ++GC K+ +S +IS + AS + S
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRR-ASEAQSFFDS 246
Query: 280 LSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQ--KLEPSNIKADNSIGYGIV 337
L D D + +V+ + R G I + E + +EP N Y IV
Sbjct: 247 LKDRFEPDVI----VYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP------NVYTYSIV 296
Query: 338 -NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGL 396
+A G +AH + +M G + + +++ + K RT + + ++ G
Sbjct: 297 IDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGC 356
Query: 397 QLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAA 456
+ D TY+ LIE ++ ++A + M + + ++ S + +E R A
Sbjct: 357 EPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC-EVNASTFNTIFRYIEKKRDVNGAH 415
Query: 457 FLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
+ + + + E T +N ++ F + + + + M+ + EPN TY L+ +
Sbjct: 416 RMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMF 475
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 19/226 (8%)
Query: 379 NRTAEATILVME--ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 436
N+ ++ ILV E + S Q DV ++ LI+ ++ A SL+ + E+R +
Sbjct: 132 NKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED 191
Query: 437 SYLTI-----MTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCK-AGRLEDA 490
+Y + M GL+E R E++ + P+ +G +N+ I K G E+A
Sbjct: 192 TYALLIKAYCMAGLIE--RAEVVLVEMQNHHVSPKT-IGVTVYNAYIEGLMKRKGNTEEA 248
Query: 491 RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNL 550
F+RM + +P +TY +IN Y A K + M W S I L
Sbjct: 249 IDVFQRMKRDRCKPTTETYNLMINLYGKASKSY---MSWKLYCEMRSHQCKPNICTYTAL 305
Query: 551 VDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKK 596
V+AF + G + A ++ E+ E + D + Y A ME++ +
Sbjct: 306 VNAF----AREGLCEKAEEIFEQLQEDGLEPDVYVY-NALMESYSR 346
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 19/226 (8%)
Query: 379 NRTAEATILVME--ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 436
N+ ++ ILV E + S Q DV ++ LI+ ++ A SL+ + E+R +
Sbjct: 154 NKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED 213
Query: 437 SYLTI-----MTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCK-AGRLEDA 490
+Y + M GL+E R E++ + P+ +G +N+ I K G E+A
Sbjct: 214 TYALLIKAYCMAGLIE--RAEVVLVEMQNHHVSPKT-IGVTVYNAYIEGLMKRKGNTEEA 270
Query: 491 RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNL 550
F+RM + +P +TY +IN Y A K + M W S I L
Sbjct: 271 IDVFQRMKRDRCKPTTETYNLMINLYGKASKSY---MSWKLYCEMRSHQCKPNICTYTAL 327
Query: 551 VDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKK 596
V+AF + G + A ++ E+ E + D + Y A ME++ +
Sbjct: 328 VNAF----AREGLCEKAEEIFEQLQEDGLEPDVYVY-NALMESYSR 368
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 80/194 (41%), Gaps = 14/194 (7%)
Query: 371 ILKAYCKENRTAEATI-LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 429
++KA C+ + T +A + + +E+ G D TY LI A LF +M E
Sbjct: 162 LIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221
Query: 430 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 489
+Y +++ GL + + +L+E+ IE ++S++ CK GR
Sbjct: 222 DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM-KSKGIEPNVFTYSSLMDGLCKDGRSLQ 280
Query: 490 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN 549
A F M PN TY +LI G +K + L + +++ G K
Sbjct: 281 AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLD----RMNLQGLKP------ 330
Query: 550 LVDAFLYAMVKGGF 563
DA LY V GF
Sbjct: 331 --DAGLYGKVISGF 342
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 136/332 (40%), Gaps = 38/332 (11%)
Query: 255 FYSNLISGYVKSGNLASMEST------ILRSLSDEDRKDWNFGGETFCAVVKEYLRK--- 305
F+++++ Y G++A + T IL+S + ++ G TF ++ R
Sbjct: 87 FHNSVLQSY---GSIAVVNDTVKLFQHILKS-----QPNFRPGRSTFLILLSHACRAPDS 138
Query: 306 --GNIKGLANL-INEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGS 362
N+ + NL +N LEP + D + V + G D+A ++ E+
Sbjct: 139 SISNVHRVLNLMVNNG--LEPDQVTTDIA-----VRSLCETGRVDEAKDLMKELTEKHSP 191
Query: 363 VGLGVYIPILKAYCKENRTAEATILVMEISSS-GLQLDVETYDALIETSMSSQDFQSAFS 421
Y +LK CK V E+ ++ D+ ++ LI+ +S++ + A
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 422 LFRDMREARVPDLKGSYLTIMTGLMENHR-PELMAAFLDEVVGDPRIEVGTHDWNSIIHA 480
L + A Y TIM G + E + + + + + +E +N++I
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVY--KKMKEEGVEPDQITYNTLIFG 309
Query: 481 FCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG 540
KAGR+E+AR + M +EP+ TY SL+NG + L L +++
Sbjct: 310 LSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEME------- 362
Query: 541 HKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 572
+G + + L+ + K D M++ E
Sbjct: 363 ARGCAPNDCTYNTLLHGLCKARLMDKGMELYE 394
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 347 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 406
DKA IL M GG Y I+ CK+ A +L+ ++S SG DV TY+ +
Sbjct: 156 DKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTV 215
Query: 407 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR 466
I + + A ++D + P +Y T++ L+ + A EV+ D
Sbjct: 216 IRCMFDYGNAEQAIRFWKDQLQNGCPPFMITY-TVLVELVCRYCGSARAI---EVLEDMA 271
Query: 467 IEVGTHD---WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHF 523
+E D +NS+++ C+ G LE+ + + E N TY +L++ S E
Sbjct: 272 VEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHE--- 328
Query: 524 NVLMLWNDVKRKLS 537
W++V+ L+
Sbjct: 329 ----YWDEVEEILN 338
>AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:338538-339905 FORWARD
LENGTH=409
Length = 409
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 195 ELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL----QEKINELEVLMGEFGCS 250
+L V DAER + +M N G D++T + LY+ G +E NE+++L
Sbjct: 177 KLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFNEIKLLGEPLDYR 236
Query: 251 NKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKG 310
+ Y ++I Y+++G ES +LR + D ++ G E + A++++Y G+ +G
Sbjct: 237 S----YGSMIMAYIRAGVPEKGES-LLREM---DSQEICAGREVYKALLRDYSMGGDAEG 288
Query: 311 LANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIP 370
+ + Q + I D + ++NA G S A + M G
Sbjct: 289 AKRVFDAVQ---IAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKCVAL 345
Query: 371 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 408
+L AY KE + EA ++E+ + L E L +
Sbjct: 346 VLAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLAQ 383
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 5/177 (2%)
Query: 346 SDKAHSILDEMNALGG--SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 403
S + + AL G SV Y IL +C RT +A ++ E+ G+ ++ TY
Sbjct: 174 SKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTY 233
Query: 404 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 463
+ +++ + + A+ F +M++ +Y T++ G + DE++
Sbjct: 234 NTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIR 293
Query: 464 DPRI-EVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 519
+ + V T +N++I CK +E+A F M +EPN TY LI G A
Sbjct: 294 EGVLPSVAT--YNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 121/314 (38%), Gaps = 48/314 (15%)
Query: 205 VVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYV 264
++ M +L + P TF + YA G +K +L + M E GC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQ------------- 159
Query: 265 KSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPS 324
+LAS +TIL L R V K Y ++G ++
Sbjct: 160 ---DLASF-NTILDVLCKSKR------------VEKAYELFRALRGRFSV---------- 193
Query: 325 NIKADNSIGYGIV-NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 383
+++ Y ++ N + + KA +L EM G + L Y +LK + + +
Sbjct: 194 -----DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRH 248
Query: 384 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIM 442
A +E+ ++DV TY ++ + + + A ++F +M RE +P + +Y ++
Sbjct: 249 AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV-ATYNAMI 307
Query: 443 TGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQF 502
L + E +E+V E +N +I AG +RM
Sbjct: 308 QVLCKKDNVENAVVMFEEMVRRG-YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGC 366
Query: 503 EPNDQTYLSLINGY 516
EPN QTY +I Y
Sbjct: 367 EPNFQTYNMMIRYY 380
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Query: 395 GLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELM 454
G++ D+ETY+ +I+ S S++S+ +M + S+ +++G + + +
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 455 AAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 514
L ++ D + +G +N I + CK + ++A+ M +PN TY LI+
Sbjct: 242 GKVL-AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIH 300
Query: 515 GYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKS 574
G+ + + + + K+ ++G K D +Y + KGG F+ A+ + ++S
Sbjct: 301 GFCNEDD-------FEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKES 353
Query: 575 HE 576
E
Sbjct: 354 ME 355
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 15/248 (6%)
Query: 344 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS-GLQLDVET 402
G+++ AH + DEM L + + +L AY + EA E+ G+ D+ T
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 403 YDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAA--FLD 459
Y+ +I+ S+F ++ + PDL ++ T L E +R EL +
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDL----ISFNTLLEEFYRRELFVEGDRIW 251
Query: 460 EVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 519
+++ + +NS + + + DA M P+ TY +LI Y
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVD 311
Query: 520 EKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKI 579
V+ +N++K KG+ D + + K G D A++V E++ + K+
Sbjct: 312 NNLEEVMKCYNEMK-------EKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKL 364
Query: 580 FVDKWRYK 587
YK
Sbjct: 365 LSRPNMYK 372
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 69/167 (41%)
Query: 363 VGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSL 422
V Y+P+L+AY K EA L+ +++ G + ++ +++ +S ++ +
Sbjct: 141 VAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMV 200
Query: 423 FRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFC 482
M+ ++P SY M E + E+VGD +EVG ++ + +
Sbjct: 201 VSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYI 260
Query: 483 KAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 529
K+G E AR + N Y LI Y S V+ LW
Sbjct: 261 KSGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLW 307
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 374 AYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR-VP 432
+C ++ E + ++ G + D+ TY+ L+ + + AF L++ M R VP
Sbjct: 245 VFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVP 304
Query: 433 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 492
DL +Y +++ GL ++ R +V D I+ +N++I+A+CK G ++ +++
Sbjct: 305 DLV-TYTSLIKGLCKDGRVREAHQTFHRMV-DRGIKPDCMSYNTLIYAYCKEGMMQQSKK 362
Query: 493 TFRRMNFLQFEPNDQTYLSLINGYV 517
M P+ T ++ G+V
Sbjct: 363 LLHEMLGNSVVPDRFTCKVIVEGFV 387
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 5/216 (2%)
Query: 310 GLANLINEA----QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGL 365
G AN +NEA +++ + K D +++ G D A + M A G S
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 366 GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 425
Y I+ K A L E+ G ++ TY+ +++ ++++Q+A L+RD
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 426 MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAG 485
M+ A K +Y +M L E A E+ I + ++ + KAG
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP-DEPVYGLLVDLWGKAG 588
Query: 486 RLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 521
+E A + ++ M PN T SL++ ++ K
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 3/189 (1%)
Query: 347 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 406
++A ++L + LG + Y ++K Y + EA + + +G++ DV TY++L
Sbjct: 30 ERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSL 89
Query: 407 IETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 465
I + + LF +M + + PD+ SY T+M+ + R L E +
Sbjct: 90 ISGAAKNLMLNRVLQLFDEMLHSGLSPDM-WSYNTLMSCYFKLGRHGEAFKILHEDIHLA 148
Query: 466 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNV 525
+ G +N ++ A CK+G ++A F+ + + +P TY LING + + +V
Sbjct: 149 GLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSV 207
Query: 526 LMLWNDVKR 534
+ ++K+
Sbjct: 208 DWMMRELKK 216
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 147/361 (40%), Gaps = 56/361 (15%)
Query: 199 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE---LEVLMGEFGCSNKKVF 255
V+ AE + + LG+R +E T + L AV G Q K+ E L + GE K V
Sbjct: 651 VSKAEMIADIIIRLGLRMEEET---IATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVI 707
Query: 256 YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKG--------- 306
S +I YV+ G L + S K + G T +V +G
Sbjct: 708 RS-MIDAYVRCGWLEDAYGLFMESAE----KGCDPGAVTISILVNALTNRGKHREAEHIS 762
Query: 307 ------NIK----GLANLIN---EAQKLE--------------PSNIKADNSIGYGIVNA 339
NI+ G LI EA KL+ P +I+ Y + +
Sbjct: 763 RTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQT-----YNTMIS 817
Query: 340 CVSMGLS-DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQL 398
GL DKA I G + +Y ++ Y K + +EA L E+ G++
Sbjct: 818 VYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKP 877
Query: 399 DVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAF 457
+Y+ +++ +S+ L + M R R DL +YLT++ E+ +
Sbjct: 878 GTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDL-STYLTLIQVYAESSQFAEAEKT 936
Query: 458 LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV 517
+ +V + I + ++S++ A KAG +E+A RT+ +M+ P+ +++ GY+
Sbjct: 937 IT-LVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYM 995
Query: 518 S 518
+
Sbjct: 996 T 996
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 97/241 (40%), Gaps = 17/241 (7%)
Query: 336 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 395
I+ +G K +M+ G + L Y + CK + +A L E+ S
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 254
Query: 396 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 455
++LDV Y+ +I +SQ + +FR+MRE ++ TI+ L E+ R
Sbjct: 255 MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAY 314
Query: 456 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRT---FRRMNFLQFEPNDQTYLSL 512
LDE+ P+ G +SI + C RLE F RM P TY+ L
Sbjct: 315 RMLDEM---PK--RGCQP-DSITY-MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVML 367
Query: 513 INGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 572
+ + VL +W +K G D +A + A+++ G D A + E
Sbjct: 368 MRKFERWGFLQPVLYVWKTMK-------ESGDTPDSAAYNAVIDALIQKGMLDMAREYEE 420
Query: 573 K 573
+
Sbjct: 421 E 421
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 368 YIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM- 426
Y I+ CK + EA + + SGLQ DV+TY+ +I S A L+ +M
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFS----SLGRAEKLYAEMI 72
Query: 427 REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGR 486
R VPD +Y +++ GL + ++ + ++ +N++I+ +CKA R
Sbjct: 73 RRGLVPDTI-TYNSMIHGLCKQNK----------LAQARKVSKSCSTFNTLINGYCKATR 121
Query: 487 LEDARRTFRRMNFLQFEPNDQTYLSLINGY 516
++D F M N TY +LI+G+
Sbjct: 122 VKDGMNLFCEMYRRGIVANVITYTTLIHGF 151
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 5/216 (2%)
Query: 310 GLANLINEA----QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGL 365
G AN +NEA +++ + K D +++ G D A + M A G S
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 366 GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 425
Y I+ K A L E+ G ++ TY+ +++ ++++Q+A L+RD
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 426 MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAG 485
M+ A K +Y +M L E A E+ I + ++ + KAG
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP-DEPVYGLLVDLWGKAG 588
Query: 486 RLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 521
+E A + ++ M PN T SL++ ++ K
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 5/216 (2%)
Query: 310 GLANLINEA----QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGL 365
G AN +NEA +++ + K D +++ G D A + M A G S
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 366 GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 425
Y I+ K A L E+ G ++ TY+ +++ ++++Q+A L+RD
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 426 MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAG 485
M+ A K +Y +M L E A E+ I + ++ + KAG
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP-DEPVYGLLVDLWGKAG 588
Query: 486 RLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 521
+E A + ++ M PN T SL++ ++ K
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 171/384 (44%), Gaps = 33/384 (8%)
Query: 199 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 258
+ DA + M GV D +TF + + G + L M E G S Y+
Sbjct: 321 LNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNI 380
Query: 259 LISGYVKSGNL-ASMESTILRSLSDEDRKDWNFGGE-TFCAVVKEYLRKGNIKGLANLIN 316
L+S + +G++ A++E R + RK F T AV+ ++ + + +I
Sbjct: 381 LLSLHADAGDIEAALE--YYRKI----RKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIA 434
Query: 317 EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD--EMNALGGSVGLGVYIPILKA 374
E ++ ++I+ D I+ V+ GL +A ++ + +++ + S L I +
Sbjct: 435 E---MDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDV--- 488
Query: 375 YCKENRTAEA-TILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR-EARVP 432
Y ++ EA T+ + + SG + DV Y+ +I+ ++ + A SLF+ M+ + P
Sbjct: 489 YAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWP 548
Query: 433 D--LKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 489
D S ++ G+ + + ++A LD + G + ++I ++ + G L D
Sbjct: 549 DECTYNSLFQMLAGVDLVDEAQRILAEMLDS-----GCKPGCKTYAAMIASYVRLGLLSD 603
Query: 490 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN 549
A + M +PN+ Y SLING+ + M+ ++ + H G++ +H
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAESG------MVEEAIQYFRMMEEH-GVQSNHI 656
Query: 550 LVDAFLYAMVKGGFFDAAMQVVEK 573
++ + + A K G + A +V +K
Sbjct: 657 VLTSLIKAYSKVGCLEEARRVYDK 680
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 159/422 (37%), Gaps = 78/422 (18%)
Query: 180 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 239
PD A L C+ + V + E V+ M +R DE + + +Y +GL + +
Sbjct: 408 PDTVTHRAVLH-ILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGL---VVQ 463
Query: 240 LEVLMGEF--GCSNKKVFYSNLISGYVKSGNLASMESTIL--RSLSDE--DRKDWNFGGE 293
+ L F C + +I Y + G E+ R++S + D ++N
Sbjct: 464 AKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYN---- 519
Query: 294 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 353
++K Y G K ++ + ++ D + + L D+A IL
Sbjct: 520 ---VMIKAY---GKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 354 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 413
EM G G Y ++ +Y + ++A L + +G++ + Y +LI S
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 414 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 473
+ A FR M E G+ NH +V
Sbjct: 634 GMVEEAIQYFRMMEE--------------HGVQSNH-----------IV----------- 657
Query: 474 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN---DQTYLSLIN--GYVS-AEKHFNVLM 527
S+I A+ K G LE+ARR + +M + P+ + LSL G VS AE FN L
Sbjct: 658 LTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNAL- 716
Query: 528 LWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKG-GFFDAAMQVVEKSHEMKIFVDKWRY 586
+ K + D I F A + + KG G D A++V E+ E + D +
Sbjct: 717 -----REKGTCD---VISF------ATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSF 762
Query: 587 KQ 588
Q
Sbjct: 763 NQ 764
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 153/402 (38%), Gaps = 62/402 (15%)
Query: 139 ETIHAMLDSMKGANTAAP----------AFALVRCMFKNRVALDEKLEF-MKPDVAACNA 187
+T++ +LD M + P F R + + +D +F +KP + N+
Sbjct: 93 DTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNS 152
Query: 188 ALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQ--EKINE---LEV 242
L+ E + E M G+ D T+G L +KGL +I + L
Sbjct: 153 ILDVLVKEDIDIA-REFFTRKMMASGIHGDVYTYGIL-----MKGLSLTNRIGDGFKLLQ 206
Query: 243 LMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEY 302
+M G + V Y+ L+ K+G + S ++ + + + +N +C
Sbjct: 207 IMKTSGVAPNAVVYNTLLHALCKNGKVGRARS-LMSEMKEPNDVTFNILISAYC------ 259
Query: 303 LRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSM----------GLSDKAHSI 352
NE QKL S + + G V V++ G +A +
Sbjct: 260 -------------NE-QKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEV 305
Query: 353 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 412
L+ + + GG V + ++K YC + A +E+ G +VETY+ LI
Sbjct: 306 LERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCD 365
Query: 413 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLD-----EVVGDPRI 467
SA F DM+ + ++ T++ GL R + L+ + V RI
Sbjct: 366 VGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARI 425
Query: 468 EVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 509
+ +N +I+ F K R EDA +M L D+++
Sbjct: 426 D----PYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSF 463
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 367 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 426
++ ++K + ++ A +++++ G+ D + + LIE+ + Q + +F+ M
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 427 REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGR 486
++ V SY ++ ++ R + + +++V + +E H +N ++ F + R
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEG-VEPTRHTYNLMLWGFFLSLR 270
Query: 487 LEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 521
LE A R F M P+D T+ ++ING+ +K
Sbjct: 271 LETALRFFEDMKTRGISPDDATFNTMINGFCRFKK 305
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 93/229 (40%), Gaps = 7/229 (3%)
Query: 344 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 403
G+ ++ I +M LG + Y + K + R A ++ S G++ TY
Sbjct: 199 GIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTY 258
Query: 404 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 463
+ ++ S ++A F DM+ + ++ T++ G + + E+ G
Sbjct: 259 NLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKG 318
Query: 464 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHF 523
+ +I + ++I + R++D R F M EPN TY +L+ G A K
Sbjct: 319 N-KIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMV 377
Query: 524 NVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 572
+ ++ K H K D+++ L + K G AA +V++
Sbjct: 378 EAKNILKNMMAK-----HIAPK-DNSIFLKLLVSQSKAGDMAAATEVLK 420
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 3/183 (1%)
Query: 352 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 411
+L M A + +Y I+K C + EA + + G D Y +I
Sbjct: 270 VLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFC 329
Query: 412 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 471
SA L+ +M + + + +Y ++ G + L+ AF +E++ + GT
Sbjct: 330 EKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGY--GGT 387
Query: 472 H-DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWN 530
N++I FC G+ ++A F+ M+ PN TY +LI G+ K L L+
Sbjct: 388 MLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYK 447
Query: 531 DVK 533
++K
Sbjct: 448 ELK 450
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 70/137 (51%), Gaps = 5/137 (3%)
Query: 294 TFCAVVKEYLRKGNIKGLANLINEA-QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSI 352
T+ +++ +++KG + ++++ + ++I N I G+ MG +D A ++
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGK----MGRADLASAV 687
Query: 353 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 412
LD + GG + + +Y ++ A K R EAT L + S+G+ DV +Y+ +IE +
Sbjct: 688 LDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSK 747
Query: 413 SQDFQSAFSLFRDMREA 429
+ + A+ + M +A
Sbjct: 748 AGKLKEAYKYLKAMLDA 764
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 391 ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR-EARVPDLKGSYLTIMTGLMENH 449
+ GL+ DV TY++LI+ ++ + A+ L MR E PD+ +Y T++ GL
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVI-TYTTVIGGLGLIG 295
Query: 450 RPELMAAFLDEVVGDPRIEVGTHD----WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 505
+P+ L E+ E G + +N+ I FC A RL DA + M PN
Sbjct: 296 QPDKAREVLKEMK-----EYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPN 350
Query: 506 DQTYLSLINGYVSAEKHFNVLMLWNDVKR 534
TY F VL L ND+ R
Sbjct: 351 ATTY----------NLFFRVLSLANDLGR 369
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 153/381 (40%), Gaps = 69/381 (18%)
Query: 176 EFMKPDVAACNAALEGCCCELESVTDAERVVG---TMSNLGVRPDELTFGFL-------- 224
E KPDV+ CN L G ++ E+ V M GV PD TF F+
Sbjct: 71 EIPKPDVSICNHVLRGSAQSMK----PEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLE 126
Query: 225 ----GYLYAVK------GLQEKINELEVLM----GEFGCSNK---------KVFYSNLIS 261
G+ + K L E + +L G+ G +++ KV +S++ S
Sbjct: 127 WRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTS 186
Query: 262 GYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKL 321
GY K G + + + +D+ WN T C KE ++ A++L
Sbjct: 187 GYAKRGKIDE-AMRLFDEMPYKDQVAWNV-MITGCLKCKE-------------MDSAREL 231
Query: 322 EPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC----- 376
+ D +++ V+ G +A I EM G + + +L A
Sbjct: 232 FDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDL 291
Query: 377 KENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 436
+ + IL SS + + ++ALI+ A +FR +++ DL
Sbjct: 292 ETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR---DL-S 347
Query: 437 SYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD--WNSIIHAFCKAGRLEDARRTF 494
++ T++ GL +H + F +E+ R++V ++ + +I A +GR+++ R+ F
Sbjct: 348 TWNTLIVGLALHHAEGSIEMF-EEM---QRLKVWPNEVTFIGVILACSHSGRVDEGRKYF 403
Query: 495 RRM-NFLQFEPNDQTYLSLIN 514
M + EPN + Y +++
Sbjct: 404 SLMRDMYNIEPNIKHYGCMVD 424
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 162/393 (41%), Gaps = 45/393 (11%)
Query: 209 MSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKV---FYSNLISGYVK 265
M + G++PD +++ L Y ++++ + E E E L+ E N ++ S L YV+
Sbjct: 393 MKDDGLKPDPVSYRTLLYAFSIRHMVE---EAEGLIAEMDDDNVEIDEYTQSALTRMYVE 449
Query: 266 SGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSN 325
+ L S R N E + A + Y +G + + Q++
Sbjct: 450 AEMLEKSWSWFKRF-----HVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRT 504
Query: 326 IKADNSI--GYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 383
+ N + YGI +C +KA + + M + G + Y +++ + +
Sbjct: 505 VIEYNVMIKAYGISKSC------EKACELFESMMSYGVTPDKCTYNTLVQILASADMPHK 558
Query: 384 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIM 442
+ ++ +G D Y A+I + + A ++++M E + PD+ Y ++
Sbjct: 559 GRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVV-VYGVLI 617
Query: 443 TGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRM----N 498
+ + +++ E + + I + +NS+I + K G L++A +R++ N
Sbjct: 618 NAFADTGNVQQAMSYV-EAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN 676
Query: 499 FLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAM 558
Q+ P+ T +IN Y +++ +K++ ++ F +AM
Sbjct: 677 KTQY-PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEAN-------------EFTFAM 722
Query: 559 V-----KGGFFDAAMQVVEKSHEMKIFVDKWRY 586
+ K G F+ A Q+ ++ EMKI D Y
Sbjct: 723 MLCMYKKNGRFEEATQIAKQMREMKILTDPLSY 755
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 122/283 (43%), Gaps = 34/283 (12%)
Query: 309 KGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGV- 367
+ L ++ E + + + + + ++ ACV G D A + EM GG +GV
Sbjct: 56 RQLGQIVEEVEAAKKRYGRLNTIVMNSVLEACVHCGNIDLALRMFHEMAEPGG---IGVD 112
Query: 368 ---YIPILKAYCKENRTAEATILVMEI---SSSGL-QLDVETYDALIETSMSSQDFQSAF 420
Y ILK K R EA ++ I +++G +L L++ +++ D + A
Sbjct: 113 SISYATILKGLGKARRIDEAFQMLETIEYGTAAGTPKLSSSLIYGLLDALINAGDLRRAN 172
Query: 421 SLFRD----MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 476
L + + P + Y +M G + + P+ LDE++ R+E +N+
Sbjct: 173 GLLARYDILLLDHGTPSVL-IYNLLMKGYVNSESPQAAINLLDEML-RLRLEPDRLTYNT 230
Query: 477 IIHAFCKAGRLEDARRTFRRM---------NFLQFEPNDQTYLSLINGYVSAEKHFNVLM 527
+IHA K G L+ A + F M +FLQ P+ TY +L+ G+ A ++
Sbjct: 231 LIHACIKCGDLDAAMKFFNDMKEKAEEYYDDFLQ--PDVVTYTTLVKGFGDATDLLSLQE 288
Query: 528 LWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQV 570
++ ++K + + D A + AM+K G A+ V
Sbjct: 289 IFLEMKL------CENVFIDRTAFTAVVDAMLKCGSTSGALCV 325
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 161/391 (41%), Gaps = 35/391 (8%)
Query: 179 KPDVAACNAALEGCC--CELESVTDAERVVGTMSNLGVRPDELTFG--FLGYLYAVKGLQ 234
+PDV + N+ ++G C ++ S + + +PD ++F F G+
Sbjct: 88 EPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGF-----SKM 142
Query: 235 EKINELEVLMGEF--GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGG 292
+ ++E+ V MG CS V YS I + KSG L L+S R +
Sbjct: 143 KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL----QLALKSFHSMKRDALSPNV 198
Query: 293 ETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACVSMGLSDKAHS 351
TF ++ Y + G+++ +L E +++ S N + Y +++ G +A
Sbjct: 199 VTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSL----NVVTYTALIDGFCKKGEMQRAEE 254
Query: 352 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 411
+ M VY I+ + + + A + ++ + G++LD+ Y +I
Sbjct: 255 MYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLC 314
Query: 412 SSQDFQSAFSLFRDMREAR-VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVG 470
+ + A + DM ++ VPD+ + T+M ++ R + +++ + E
Sbjct: 315 GNGKLKEATEIVEDMEKSDLVPDMV-IFTTMMNAYFKSGRMKAAVNMYHKLI-ERGFEPD 372
Query: 471 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING------YVSAEKHFN 524
+++I K G+L +A + F + ND Y LI+ ++ E+ F+
Sbjct: 373 VVALSTMIDGIAKNGQLHEA-----IVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFS 427
Query: 525 VLMLWNDVKRK-LSSDGHKGIKFDHNLVDAF 554
+ V K + + G+ NLVDAF
Sbjct: 428 KISEAGLVPDKFMYTSWIAGLCKQGNLVDAF 458
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 5/235 (2%)
Query: 296 CAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 355
C+++ YL L + ++K E + ++ GI + S+G D+A I
Sbjct: 336 CSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKA 395
Query: 356 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 415
M G Y ++ CK R EA ++ ++ + G D++T+ LI+ + +
Sbjct: 396 MRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNE 455
Query: 416 FQSAFSLFRDMREARVPDLKGSYLTIMT-GLMENHRPELMAAFLDEVVGDPRIEVGTHDW 474
A + F +M E D+ + L ++ G + +++ E + FL E+V + ++ +
Sbjct: 456 LDKALACFANMLEKGF-DIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTY 514
Query: 475 NSIIHAFCKAGRLEDA---RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVL 526
+I K + E+A + ++ N+ + YL+ A+K +VL
Sbjct: 515 KLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVL 569
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 116/292 (39%), Gaps = 31/292 (10%)
Query: 213 GVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASM 272
G +PD TFG L V E ++EL L + G +L++ YVK G+LA+
Sbjct: 209 GKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANA 268
Query: 273 ----ESTILRSLSDEDRKDWNFGGETFCA-----VVKEYLRKGNIKGLANLINEAQKLEP 323
E T R L F + C + K+ +R +K + + + L+
Sbjct: 269 WKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIR---MKTKMDEVVVSSMLKI 325
Query: 324 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 383
A +IG I G + K+ I ++ ALG S ++ Y K +
Sbjct: 326 CTTIASVTIGRQI------HGFALKSSQIRFDV-ALGNS--------LIDMYAKSGEIED 370
Query: 384 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 443
A + E+ + DV ++ +LI +F+ A L+ M R+ ++L++++
Sbjct: 371 AVLAFEEMK----EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLS 426
Query: 444 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFR 495
+ EL D ++ IE + II ++G LE+A R
Sbjct: 427 ACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIR 478
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 116/265 (43%), Gaps = 14/265 (5%)
Query: 256 YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLI 315
Y+ +++GYVKSG++ R + + D TF ++ Y R +L
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVC----TFNILINGYCRSSKFDLALDLF 251
Query: 316 NEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILK 373
E ++ EP N+ + N++ G + S G ++ + EM LG ++
Sbjct: 252 REMKEKGCEP-NVVSFNTLIRGFL----SSGKIEEGVKMAYEMIELGCRFSEATCEILVD 306
Query: 374 AYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVP 432
C+E R +A LV+++ + + Y +L+E A + ++ ++ + P
Sbjct: 307 GLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTP 366
Query: 433 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 492
T++ GL ++ R E + F+++++ + I + +N ++ C + DA R
Sbjct: 367 CFIAC-TTLVEGLRKSGRTEKASGFMEKMM-NAGILPDSVTFNLLLRDLCSSDHSTDANR 424
Query: 493 TFRRMNFLQFEPNDQTYLSLINGYV 517
+ +EP++ TY L++G+
Sbjct: 425 LRLLASSKGYEPDETTYHVLVSGFT 449
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 18/233 (7%)
Query: 192 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 251
CC + + M G P+ +TF L +Y L +K+NEL +L G +
Sbjct: 673 CCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVD 732
Query: 252 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGG-----ETFCAVVKEYLRKG 306
+ Y+ +I+ Y K+ + +M S I K+ F G E + ++ Y G
Sbjct: 733 V-ISYNTIIAAYGKNKDYTNMSSAI---------KNMQFDGFSVSLEAYNTLLDAY---G 779
Query: 307 NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 366
K + + ++++ S D+ ++N G D+ +L E+ G L
Sbjct: 780 KDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLC 839
Query: 367 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSA 419
Y ++KAY EA LV E+ + D TY L+ + +F A
Sbjct: 840 SYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEA 892