Miyakogusa Predicted Gene
- Lj2g3v1252580.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1252580.1 tr|G7JY14|G7JY14_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_5g0,77.71,0,PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; PPR_3,Pentatricopeptide repeat;
SUBFAM,CUFF.36570.1
(658 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 852 0.0
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 744 0.0
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 6e-61
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 166 4e-41
AT4G17616.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 1e-22
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 99 1e-20
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 8e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 87 5e-17
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 86 9e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 84 4e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 81 3e-15
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 80 4e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-14
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 9e-14
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 4e-13
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 4e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 6e-13
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 8e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 72 1e-12
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 70 6e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 67 5e-11
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 9e-11
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 65 1e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 65 1e-10
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 63 6e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 9e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 62 2e-09
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 62 2e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 57 4e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 6e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 6e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 53 7e-07
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 53 7e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 53 9e-07
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-06
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 7e-06
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26047372-26049348 REVERSE
LENGTH=658
Length = 658
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/665 (63%), Positives = 524/665 (78%), Gaps = 16/665 (2%)
Query: 1 MAKRVLTFLPHRQFSSIPEIPS-LYSFLQPSVFALNRNRTQPICEEPQXXXXXXXXXXXX 59
M ++ L + R FSS LYSFL+PS+F+ P PQ
Sbjct: 1 MFRKTLNSISRRHFSSSSPESPSLYSFLKPSLFSHKPITLSPSLSPPQNPKTLTP----- 55
Query: 60 XXDQVSTLQTTLHKSLITSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSL---GDI- 115
DQ S+ ++TLH SL TDEAWK+F+SLT+ + P K L NSLITHLS + G+
Sbjct: 56 --DQKSSFESTLHDSLNAHYTDEAWKAFRSLTAASSLPEKRLINSLITHLSGVEGSGESI 113
Query: 116 -HNLKRAFASAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFA 174
H LKRAFASA +++E++P++LE ET+ +L+SMK A A PA ALV+CMFKNRYFVPF
Sbjct: 114 SHRLKRAFASAAYVIEKDPILLEFETVRTLLESMKLAKAAGPALALVKCMFKNRYFVPFD 173
Query: 175 MWGNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVT 234
+WG+++++I R++G+LA FL VF+ESCR+++DEKLEFMKPD+ A NAALE CC ++ES+
Sbjct: 174 LWGHLVIDICRENGSLAPFLKVFKESCRISVDEKLEFMKPDLVASNAALEACCRQMESLA 233
Query: 235 DAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLI 294
DAE V+ +M+ LGV+PDEL+FGFL YLYA KGL+EKI+ELE LM FG +++++ YSN+I
Sbjct: 234 DAENVIESMAVLGVKPDELSFGFLAYLYARKGLREKISELENLMDGFGFASRRILYSNMI 293
Query: 295 SGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQK 354
SGYVKSG+L S+ IL SL E ++ +F ET+C +VK ++ ++K LA +I EAQK
Sbjct: 294 SGYVKSGDLDSVSDVILHSLK-EGGEESSFSVETYCELVKGFIESKSVKSLAKVILEAQK 352
Query: 355 LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGG-SVGLGVYIPILKAYCKEN 413
LE S + D+S+G+GI+NACV++G SDKAHSIL+EM A GG SVG+GVY+PILKAYCKE
Sbjct: 353 LESSYVGVDSSVGFGIINACVNLGFSDKAHSILEEMIAQGGGSVGIGVYVPILKAYCKEY 412
Query: 414 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYL 473
RTAEAT LV EISSSGLQLDVE +ALIE SM++QDF SAF+LFRDMRE RV DLKGSYL
Sbjct: 413 RTAEATQLVTEISSSGLQLDVEISNALIEASMTNQDFISAFTLFRDMRENRVVDLKGSYL 472
Query: 474 TIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNF 533
TIMTGL+EN RPELMAAFLDEVV DPR+EV +HDWNSIIHAFCK+GRLEDARRTFRRM F
Sbjct: 473 TIMTGLLENQRPELMAAFLDEVVEDPRVEVNSHDWNSIIHAFCKSGRLEDARRTFRRMVF 532
Query: 534 LQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSS-DGHKGIKFDHNLVDAFLYAM 592
L++EPN+QTYLSLINGYVS EK+FNVL+LWN++K K+SS + K + DH LVDAFLYA+
Sbjct: 533 LRYEPNNQTYLSLINGYVSGEKYFNVLLLWNEIKGKISSVEAEKRSRLDHALVDAFLYAL 592
Query: 593 VKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKLKVAKLRKRNTKKMEAVIAFKN 652
VKGGFFDAAMQVVEKS EMKIFVDKWRYKQAFMETHKKL++ KLRKRN KKME+++AFKN
Sbjct: 593 VKGGFFDAAMQVVEKSQEMKIFVDKWRYKQAFMETHKKLRLPKLRKRNYKKMESLVAFKN 652
Query: 653 WAGLN 657
WAGLN
Sbjct: 653 WAGLN 657
>AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:25933023-25934882 FORWARD
LENGTH=619
Length = 619
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/599 (59%), Positives = 453/599 (75%), Gaps = 17/599 (2%)
Query: 63 QVSTLQTTLHKSLITSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDI------- 115
Q S+ ++TLH SLIT DTD+AWK F+S + + P K L NSLITHLSS +
Sbjct: 27 QKSSFESTLHHSLITHDTDQAWKVFRSFAAASSLPDKRLLNSLITHLSSFHNTDQNTSLR 86
Query: 116 HNLKRAFASAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAM 175
H LKRAF S +++E++P++LE ET+ +L+SMK A + PA ALV CMFKNRYFVPF +
Sbjct: 87 HRLKRAFVSTTYVIEKDPILLEFETVRTVLESMKLAKASGPALALVECMFKNRYFVPFDL 146
Query: 176 WGNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTD 235
WG++L+++ R++G+LAAFL VF ESCR+A+DEKL+FMKPD+ A NAALE CC ++ES+ D
Sbjct: 147 WGDLLIDVCRENGSLAAFLKVFRESCRIAVDEKLDFMKPDLVASNAALEACCRQMESLAD 206
Query: 236 AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLIS 295
AE ++ +M LGV+PDEL+FGFL YLYA KGL+EKI+ELE LM G +++++ YS++IS
Sbjct: 207 AENLIESMDVLGVKPDELSFGFLAYLYARKGLREKISELEDLMDGLGFASRRILYSSMIS 266
Query: 296 GYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKL 355
GYVKSG+L S IL SL +F ET+C +V+ ++ +++ LA LI EAQKL
Sbjct: 267 GYVKSGDLDSASDVILCSLKGVGEAS-SFSEETYCELVRGFIESKSVESLAKLIIEAQKL 325
Query: 356 EPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRT 415
E + S+G+GIVNACV +G S K SILDE+NA GGS G+GVY+PILKAYCKE RT
Sbjct: 326 ESMSTDVGGSVGFGIVNACVKLGFSGK--SILDELNAQGGSGGIGVYVPILKAYCKEGRT 383
Query: 416 AEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTI 475
+EAT LV EISSSGLQLDVETY+ +IE SM+ DF SA +LFRDMRE RV DLK YLTI
Sbjct: 384 SEATQLVTEISSSGLQLDVETYNTMIEASMTKHDFLSALTLFRDMRETRVADLKRCYLTI 443
Query: 476 MTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQ 535
MTGL+EN RPELMA F++EV+ DPR+EV +HDWNSIIHAFCK+GRL DA+ TFRRM FLQ
Sbjct: 444 MTGLLENQRPELMAEFVEEVMEDPRVEVKSHDWNSIIHAFCKSGRLGDAKSTFRRMTFLQ 503
Query: 536 FEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKG 595
+EPN+QTYLSLINGYVS EK+F V+++W + K K K +H L DAFL A+VKG
Sbjct: 504 YEPNNQTYLSLINGYVSCEKYFEVVVIWKEFK-------DKKAKLEHALADAFLNALVKG 556
Query: 596 GFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKLKVAKLRKRNTKKMEAVIAFKNWA 654
GFF A+QV+EK EMKIFVDKWRYK FMET K L++ KLRKR KK+E + AFKNWA
Sbjct: 557 GFFGTALQVIEKCQEMKIFVDKWRYKATFMETQKNLRLPKLRKRKMKKIEFLDAFKNWA 615
>AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:744026-746407 REVERSE
LENGTH=793
Length = 793
Score = 232 bits (592), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 198/339 (58%), Gaps = 13/339 (3%)
Query: 327 ETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSI 386
E + + K +L G +K LA + +A+ E S + +DNS+ ++NAC+S+G+ D+AH +
Sbjct: 460 EIYVKLAKAFLESGKMKELAKFLLKAEH-EDSPVSSDNSMLINVINACISLGMLDQAHDL 518
Query: 387 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 446
LDEM G G VY +LKAYC N+T E T L+ + +G+QLD Y+ALI++ +
Sbjct: 519 LDEMRMAGVRTGSSVYSSLLKAYCNTNQTREVTSLLRDAQKAGIQLDSSCYEALIQSQVI 578
Query: 447 SQDFQSAFSLFRDMREARVPDLKGS---YLTIMTGLMENHRPELMAAFLDEVVGDPRIEV 503
D A ++F++M+EA++ L+G + ++ G N LM+ L E+ ++
Sbjct: 579 QNDTHGALNVFKEMKEAKI--LRGGNQKFEKLLKGCEGNAEAGLMSKLLREIREVQSLDA 636
Query: 504 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVS-AEKHFNVLML 562
G HDWN++IH F K G ++DA + +RM L PN QT+ S++ GY + K+ V L
Sbjct: 637 GVHDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSMVTGYAAIGSKYTEVTEL 696
Query: 563 WNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQ 622
W ++K ++ +KFD L+DA LY V+GGFF A +VVE + +FVDK++Y+
Sbjct: 697 WGEMKSIAAATS--SMKFDQELLDAVLYTFVRGGFFSRANEVVEMMEKKNMFVDKYKYRM 754
Query: 623 AFMETHK---KLKVAKLRKRNT-KKMEAVIAFKNWAGLN 657
F++ HK K K K++ + KK EA + FK W GL+
Sbjct: 755 LFLKYHKTAYKGKAPKVQSESQLKKREAGLVFKKWLGLS 793
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 113/248 (45%), Gaps = 15/248 (6%)
Query: 81 DEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPM-VLESE 139
DEAW+ F+ + FP K + N+++ + D + L++ ++ E +LE E
Sbjct: 112 DEAWRLFEQHMQMEGFPRKSVVNNVVVCFAESLDSNWLQKGYSLVEQAYEEGKQNLLEKE 171
Query: 140 TIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEI-IRKSGNLAAFLPVFE 198
+ + ++ + A PA ++R + + + + W VL + + SG+ + V E
Sbjct: 172 PLLYLSLALAKSGMAVPASTILRKLVETEEYPHVSAWSAVLAHMSLAGSGSYLSAELVLE 231
Query: 199 -----ESCRVALDEK----LEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVR 249
+ RV +K L MKP+ N AL GC + AE+++ + +GV+
Sbjct: 232 IGYLFHNNRVDPRKKSNAPLLAMKPNTQVLNVALAGCLL-FGTTRKAEQLLDMIPKIGVK 290
Query: 250 PDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK---VFYSNLISGYVKSGNLASM 306
D + ++Y G +E++ +L+ + E N+ FY+ L+ ++K G+L S
Sbjct: 291 ADANLLVIMAHIYERNGRREELRKLQRHIDEACNLNESQFWQFYNCLLMCHLKFGDLESA 350
Query: 307 ESTILRSL 314
+L L
Sbjct: 351 SKMVLEML 358
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 171/346 (49%), Gaps = 18/346 (5%)
Query: 329 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 388
+ ++K Y++ G + A ++ ++ + N D +V+A V+ GL D+A +L
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 389 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEIS-SSGLQLDVETYDALIETSMSS 447
EM +G Y +LK YCK+ + A L+ E++ +G++ DV +Y+ +I+ +
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILI 536
Query: 448 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 507
D A + F +MR + K SY T+M + +P+L DE++ DPR++V
Sbjct: 537 DDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIA 596
Query: 508 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 567
WN ++ +C+ G +EDA+R RM F PN TY SL NG A K + L+LW ++K
Sbjct: 597 WNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIK 656
Query: 568 RKL-----------SSD-GHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFV 615
+ SSD +K D L+D V+ FF A++++ E I
Sbjct: 657 ERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPP 716
Query: 616 DKWRYKQAFMETHKKLKVAKLRK-----RNTKKMEAVIAFKNWAGL 656
+K +YK+ ++E H ++ +K R ++ A AFK W GL
Sbjct: 717 NKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGL 762
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 112/550 (20%), Positives = 203/550 (36%), Gaps = 43/550 (7%)
Query: 80 TDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLM-ERNPMVLES 138
TDEAW + T P + L++ LS +L RA + L ER L++
Sbjct: 97 TDEAWAKYVQSTH---LPGPTCLSRLVSQLSYQSKPESLTRAQSILTRLRNERQLHRLDA 153
Query: 139 ETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGN------LAA 192
++ + + + A ++++ M ++ Y W V + SG+ +
Sbjct: 154 NSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAW-TAAVASLSASGDDGPEESIKL 212
Query: 193 FLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDE 252
F+ + R + +PD AA NA L C L ++ MS PD
Sbjct: 213 FIAITRRVKRFGDQSLVGQSRPDTAAFNAVLNACA-NLGDTDKYWKLFEEMSEWDCEPDV 271
Query: 253 LTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILR 312
LT+ + L A G +E I + + + G +L++ YV G+L + E I++
Sbjct: 272 LTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAER-IVQ 330
Query: 313 SLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVN 372
++ E R+D C V LR+ N + L E + + + D GY +
Sbjct: 331 AMR-EKRRD-------LCKV----LRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARD 378
Query: 373 ACVSMGLSDKAHSILDEMNALGGSVGL---------GVYIPILKAYCKENRTAEATILVM 423
G+ D +L G L +Y ++K Y K R A+ ++
Sbjct: 379 EVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLE 438
Query: 424 EI---SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 480
+ D TY ++ +++ A + +M VP + +Y ++ G
Sbjct: 439 AMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYC 498
Query: 481 ENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPND 540
+ + + L E+ D IE +N II A F M P
Sbjct: 499 KQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTK 558
Query: 541 QTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDA 600
+Y +L+ + + + L N V ++ +D +K D + + + G +
Sbjct: 559 ISYTTLMKAFAMSGQP----KLANRVFDEMMNDPR--VKVDLIAWNMLVEGYCRLGLIED 612
Query: 601 AMQVVEKSHE 610
A +VV + E
Sbjct: 613 AQRVVSRMKE 622
>AT4G17616.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:9819608-9821632 FORWARD
LENGTH=674
Length = 674
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 134/665 (20%), Positives = 274/665 (41%), Gaps = 123/665 (18%)
Query: 67 LQTTLHKSLITSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAV 126
L+ L +L D+AW FK FP + N +T LS D L +A
Sbjct: 57 LKKKLETALKDHRVDDAWDVFKDFKRLYGFPESVIMNRFVTVLSYSSDAGWLCKASDLTR 116
Query: 127 FLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRK 186
+++NP +L + + + S+ A A +++R M + Y + + V++ +++
Sbjct: 117 LALKQNPGMLSGDVLTKLSLSLARAQMVESACSILRIMLEKGYVLTSDVLRLVVMHMVKT 176
Query: 187 SGNLAAFLPVFEESCRVALDEKLEF------------MKPDVAACNAALEGCCCELESVT 234
+ C D +EF +KPD N L G C
Sbjct: 177 EIGTCLASNYLVQVC----DRFVEFNVGKRNSSPGNVVKPDTVLFNLVL-GSCVRFGFSL 231
Query: 235 DAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFG---CSNKKVFYS 291
+ ++ M+ + V D + + +Y + G+++++ + + +G+ + + F+
Sbjct: 232 KGQELIELMAKVDVVADAYSIVIMSCIYEMNGMRDELRKFKEHIGQVPPQLLGHYQHFFD 291
Query: 292 NLISGYVKSGNLASM--------ESTILRSL------SDEDR------------------ 319
NL+S K ++ S +S +L S+ S++ R
Sbjct: 292 NLLSLEFKFDDIGSAGRLALDMCKSKVLVSVENLGFDSEKPRVLPVGSHHIRSGLKIHIS 351
Query: 320 -----KDWNFG------------------GETFCAVVKEYLRKGNIKGLANLINEAQKLE 356
+D + G +T +V Y R N+ L+ L+ L
Sbjct: 352 PKLLQRDSSLGVDTEATFVNYSNSKLGITNKTLAKLVYGYKRHDNLPELSKLLFS---LG 408
Query: 357 PSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTA 416
S + AD +++ACV++G + AH ILD+MN+ G + L Y +L Y K
Sbjct: 409 GSRLCAD------VIDACVAIGWLEAAHDILDDMNSAGYPMELATYRMVLSGYYKSKMLR 462
Query: 417 EATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIM 476
A +L+ +++ +GL D + + ++ +D ++ ++R+ V ++
Sbjct: 463 NAEVLLKQMTKAGLITD-PSNEIVVSPETEEKDSENT-----ELRDLLVQEINAG----- 511
Query: 477 TGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQF 536
+ P ++ ++ NS ++ FCKA DA T+R++ ++
Sbjct: 512 ---KQMKAPSML-----------------YELNSSLYYFCKAKMQGDALITYRKIPKMKI 551
Query: 537 EPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGG 596
P Q++ LI+ Y S + + ++W D+KR ++S K +K +L++ + ++GG
Sbjct: 552 PPTVQSFWILIDMYSSLGMYREITIVWGDIKRNIAS---KNLKTTQDLLEKLVVNFLRGG 608
Query: 597 FFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKL-KVAK----LRKRNTKKMEAVIAFK 651
+F+ M+++ E ++ D YK +++ HK L + K + + +++E V F+
Sbjct: 609 YFERVMELISYMKENDMYNDLTMYKNEYLKLHKNLYRTLKASDAVTEAQAQRLEHVKTFR 668
Query: 652 NWAGL 656
G+
Sbjct: 669 KLVGI 673
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 20/364 (5%)
Query: 213 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 272
+PDV ++ + G C + V DA +V M +G RPD + + + GL
Sbjct: 136 EPDVVTVSSLINGFC-QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 273 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 332
EL M G V Y++L++G SG S R + D +D TF AV
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRW----SDAARLMRDMVMRDIVPNVITFTAV 250
Query: 333 VKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 390
+ ++++G L E + ++P ++ NS+ +N G D+A +LD M
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDP-DVFTYNSL----INGLCMHGRVDEAKQMLDLM 305
Query: 391 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 450
G + Y ++ +CK R E T L E++ GL D TY+ +I+ +
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 451 QSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 510
+A +F M ++R P+++ +Y ++ GL N R E A L E + IE+ +N
Sbjct: 366 DAAQEIFSRM-DSR-PNIR-TYSILLYGLCMNWRVE-KALVLFENMQKSEIELDITTYNI 421
Query: 511 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKL 570
+IH CK G +EDA FR ++ +P+ +Y ++I+G+ + +L+ RK+
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY----RKM 477
Query: 571 SSDG 574
DG
Sbjct: 478 QEDG 481
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/366 (19%), Positives = 145/366 (39%), Gaps = 58/366 (15%)
Query: 97 PPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETIHAMLDSMKGANTAAP 156
P + N++I +G +++ F MER+ + ++ T ++++ + + +
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDR----MERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 157 AFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDV 216
A L+R M R VP + ++++ K G + + ++EE R +D PDV
Sbjct: 228 AARLMRDMVM-RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD-------PDV 279
Query: 217 AACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEV 276
N+ + G C V +A++++ M G PD +T+ L + ++ +L
Sbjct: 280 FTYNSLINGLCMH-GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 277 LMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEY 336
M + G + Y+ +I GY ++G + + R S
Sbjct: 339 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS--------------------- 377
Query: 337 LRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGS 396
P NI+ + + YG+ C++ + +KA + + M
Sbjct: 378 -------------------RP-NIRTYSILLYGL---CMNWRV-EKALVLFENMQKSEIE 413
Query: 397 VGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSL 456
+ + Y ++ CK +A L +S GL+ DV +Y +I + + + L
Sbjct: 414 LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLL 473
Query: 457 FRDMRE 462
+R M+E
Sbjct: 474 YRKMQE 479
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 177/399 (44%), Gaps = 23/399 (5%)
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 271
+KPDV+ N ++ C + A ++ M + G+ PDE TF + Y +G +
Sbjct: 185 IKPDVSTFNVLIKALC-RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 272 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE-TFC 330
+ M EFGCS V + ++ G+ K G + L + + +D F + TF
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA----LNFIQEMSNQDGFFPDQYTFN 299
Query: 331 AVVKEYLRKGNIKGLANLINEA-QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 389
+V + G++K +++ Q+ ++ NS+ G+ +G +A +LD+
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK----LGEVKEAVEVLDQ 355
Query: 390 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 449
M S Y ++ CKEN+ EAT L ++S G+ DV T+++LI+ +++
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 450 FQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLD--EVVGDPRIEVGTHD 507
+ A LF +MR + +Y ++ L + + L E+ G R +
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI---T 472
Query: 508 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 567
+N++I FCKA + +A F M N TY +LI+G + + + L +
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD--- 529
Query: 568 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 606
++ +G K K+ +N + L +GG A +V+
Sbjct: 530 -QMIMEGQKPDKYTYN---SLLTHFCRGGDIKKAADIVQ 564
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 153/343 (44%), Gaps = 20/343 (5%)
Query: 217 AACNAALEGCCCELESVTDAERVVGTMSNL-GVRPDELTFGFL-GYLYAVKGLQEKINEL 274
+ N + G C E V DA + MSN G PD+ TF L L ++ I +
Sbjct: 260 VSVNVIVHGFCKE-GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318
Query: 275 EVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVK 334
+V++ E G Y+++ISG K G + + + ++ +D + T+ ++
Sbjct: 319 DVMLQE-GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT----RDCSPNTVTYNTLIS 373
Query: 335 EYLRKGNIKGLANLINEAQKLEPSNIKAD----NSIGYGIVNACVSMGLSDKAHSILDEM 390
++ ++ L A+ L I D NS+ G+ C++ A + +EM
Sbjct: 374 TLCKENQVEEATEL---ARVLTSKGILPDVCTFNSLIQGL---CLTRN-HRVAMELFEEM 426
Query: 391 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 450
+ G Y ++ + C + + EA ++ ++ SG V TY+ LI+ +
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 451 QSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 510
+ A +F +M V +Y T++ GL ++ R E A +D+++ + + + + +NS
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNS 545
Query: 511 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 553
++ FC+ G ++ A + M EP+ TY +LI+G A
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 161/397 (40%), Gaps = 23/397 (5%)
Query: 176 WGNVLVEIIR----KSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELE 231
W NV V +I K G + L +E + + F PD N + G C +
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQE-----MSNQDGFF-PDQYTFNTLVNGLC-KAG 309
Query: 232 SVTDAERVVGTMSNLGVRPDELTF-GFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFY 290
V A ++ M G PD T+ + L + ++E + L+ ++ CS V Y
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR-DCSPNTVTY 368
Query: 291 SNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLIN 350
+ LIS K N + + R L+ K TF ++++ N + L
Sbjct: 369 NTLISTLCKE-NQVEEATELARVLTS---KGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 351 EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC 410
E + + D ++++ S G D+A ++L +M G + + Y ++ +C
Sbjct: 425 E---MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 411 KENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLK 469
K N+T EA + E+ G+ + TY+ LI+ S+ + A L M E + PD K
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD-K 540
Query: 470 GSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFR 529
+Y +++T + AA + + + E + ++I CKAGR+E A + R
Sbjct: 541 YTYNSLLTHFCRGGDIK-KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 530 RMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 566
+ Y +I G K + L+ ++
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 19/278 (6%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVV----GTMSNLGVRPDELTFGFLGYLYAVKG-LQ 268
PDV N+ ++G C +T RV M + G PDE T+ L KG L
Sbjct: 398 PDVCTFNSLIQGLC-----LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 269 EKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET 328
E +N L+ M GC+ + Y+ LI G+ K+ E + + + T
Sbjct: 453 EALNMLKQ-MELSGCARSVITYNTLIDGFCKANKTREAEEI----FDEMEVHGVSRNSVT 507
Query: 329 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 388
+ ++ + ++ A L+++ + K D ++ G KA I+
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQ---MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 389 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 448
M + G + Y ++ CK R A+ L+ I G+ L Y+ +I+ +
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624
Query: 449 DFQSAFSLFRDMREA-RVPDLKGSYLTIMTGLMENHRP 485
A +LFR+M E P SY + GL P
Sbjct: 625 KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGP 662
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 116/269 (43%), Gaps = 12/269 (4%)
Query: 284 SNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIK 343
S + Y ++ +SG+ M+ + L D G TF +++ Y +
Sbjct: 80 SPEPALYEEILLRLGRSGSFDDMK----KILEDMKSSRCEMGTSTFLILIESYAQFELQD 135
Query: 344 GLANLINEAQKLEPSNIKADNSIGYGIVNACV---SMGLSDKAHSILDEMNALGGSVGLG 400
+ ++++ ++ +K D ++N V S+ L + +H+ +M+ G +
Sbjct: 136 EILSVVD--WMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA---KMSVWGIKPDVS 190
Query: 401 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 460
+ ++KA C+ ++ A +++ ++ S GL D +T+ +++ + D A + M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 461 REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGR 520
E S I+ G + R E F+ E+ + +N++++ CKAG
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 521 LEDARRTFRRMNFLQFEPNDQTYLSLING 549
++ A M ++P+ TY S+I+G
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 223/520 (42%), Gaps = 97/520 (18%)
Query: 140 TIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEE 199
T ++ + N A +L+R M K+ VP ++ L+ + K + L + EE
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGC-VPNSVIYQTLIHSLSKCNRVNEALQLLEE 277
Query: 200 SCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL- 258
+ PD N + G C + + + +A ++V M G PD++T+G+L
Sbjct: 278 MFLMGC-------VPDAETFNDVILGLC-KFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329
Query: 259 ------GYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILR 312
G + A K L +I + E+ V ++ LI G+V G L ++ +
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPKPEI-----------VIFNTLIHGFVTHGRLDDAKAVLSD 378
Query: 313 SLSDEDRKDWNFGGE----TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY 368
++ ++G T+ +++ Y ++G + GLA + + K N Y
Sbjct: 379 MVT-------SYGIVPDVCTYNSLIYGYWKEG-LVGLA--LEVLHDMRNKGCKP-NVYSY 427
Query: 369 GI-VNACVSMGLSDKAHSILDEMNALG---GSVGLGVYIPILKAYCKENRTAEATILVME 424
I V+ +G D+A+++L+EM+A G +VG I A+CKE+R EA + E
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI---SAFCKEHRIPEAVEIFRE 484
Query: 425 ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHR 484
+ G + DV T+++LI + + A L RDM V +Y T++ +
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 485 PELMAAFLDEVV--GDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRM----------- 531
+ ++E+V G P E+ +NS+I C+AG ++ AR F +M
Sbjct: 545 IKEARKLVNEMVFQGSPLDEI---TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 532 -NFL--------------QFE---------PNDQTYLSLINGYVSAEKHFNVLMLWNDVK 567
N L +F+ P+ T+ SLING A + + L ++
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF---- 657
Query: 568 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGF-FDAAMQVVE 606
RKL ++ GI D + + + KGGF +DA + + E
Sbjct: 658 RKLQAE---GIPPDTVTFNTLMSWLCKGGFVYDACLLLDE 694
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 193/477 (40%), Gaps = 34/477 (7%)
Query: 77 TSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVL 136
++ D A + +T H P + +LI LS + N +FLM P
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV-NEALQLLEEMFLMGCVP--- 285
Query: 137 ESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPV 196
++ET + ++ + + A +V M R F P + L+ + K G + A
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLI-RGFAPDDITYGYLMNGLCKIGRVDA---- 340
Query: 197 FEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTM-SNLGVRPDELTF 255
A D KP++ N + G + DA+ V+ M ++ G+ PD T+
Sbjct: 341 -------AKDLFYRIPKPEIVIFNTLIHGFVTH-GRLDDAKAVLSDMVTSYGIVPDVCTY 392
Query: 256 GFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLS 315
L Y Y +GL E+ M GC Y+ L+ G+ K G + + +L +S
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN-VLNEMS 451
Query: 316 DEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACV 375
+ K G F ++ + ++ I + E + K D +++
Sbjct: 452 ADGLKPNTVG---FNCLISAFCKEHRIPEAVEIFREMPR---KGCKPDVYTFNSLISGLC 505
Query: 376 SMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVE 435
+ A +L +M + G Y ++ A+ + EA LV E+ G LD
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 436 TYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDE 494
TY++LI+ + + A SLF M R+ P S ++ GL + E F E
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS-NISCNILINGLCRSGMVEEAVEFQKE 624
Query: 495 VVGDPRIEVGTHD---WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 548
+V + T D +NS+I+ C+AGR+ED FR++ P+ T+ +L++
Sbjct: 625 MV----LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 148/366 (40%), Gaps = 38/366 (10%)
Query: 236 AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVL--MGEFGCSNKKVFYSNL 293
A V M + + P TFG + + A + E + L +L M + GC V Y L
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVV--MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258
Query: 294 ISGYVKSGN----LASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLI 349
I K L +E L + ETF V+ + I A ++
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPD--------AETFNDVILGLCKFDRINEAAKMV 310
Query: 350 NEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILK 407
N + P +I + GY ++N +G D A + + + ++ ++
Sbjct: 311 NRMLIRGFAPDDI----TYGY-LMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIH 361
Query: 408 AYCKENRTAEA-TILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVP 466
+ R +A +L ++S G+ DV TY++LI A + DMR
Sbjct: 362 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421
Query: 467 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 526
SY ++ G + + + L+E+ D ++ T +N +I AFCK R+ +A
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG-LKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 527 TFRRMNFLQFEPNDQTYLSLINGYVSAE--KHFNVLMLWNDVKRKLSSDGHKGIKFDHN- 583
FR M +P+ T+ SLI+G + KH LW + R + S+G +N
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKH----ALW--LLRDMISEGVVANTVTYNT 534
Query: 584 LVDAFL 589
L++AFL
Sbjct: 535 LINAFL 540
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 178/442 (40%), Gaps = 29/442 (6%)
Query: 94 QAFPPKPLT-NSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETIHAMLDSMKGAN 152
+ F P +T L+ L +G + K F + + + +V+ + IH + + +
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLF----YRIPKPEIVIFNTLIHGFVTHGRLDD 371
Query: 153 TAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFM 212
A A++ M + VP N L+ K G + L V D + +
Sbjct: 372 ----AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH-------DMRNKGC 420
Query: 213 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 272
KP+V + ++G C +L + +A V+ MS G++P+ + F L + + +
Sbjct: 421 KPNVYSYTILVDGFC-KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 273 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 332
E+ M GC +++LISG + + L L D + T+ +
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA----LWLLRDMISEGVVANTVTYNTL 535
Query: 333 VKEYLRKGNIKGLANLINEAQ-KLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 391
+ +LR+G IK L+NE + P + NS+ G+ A G DKA S+ ++M
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA----GEVDKARSLFEKML 591
Query: 392 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 451
G + ++ C+ EA E+ G D+ T+++LI + +
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Query: 452 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSI 511
++FR ++ +P ++ T+M+ L + LDE + D + W+ +
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP-NHRTWSIL 710
Query: 512 IHAFCKAGRLEDARRTFRRMNF 533
+ + L+ RR F F
Sbjct: 711 LQSIIPQETLD--RRRFYNAAF 730
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 174/401 (43%), Gaps = 54/401 (13%)
Query: 213 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 272
KP + NA + G C V+DA ++ M G +P+E+T+G + + G
Sbjct: 174 KPTLITLNALVNGLCLN-GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 273 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS-------ME-----------STILRSL 314
EL M E V YS +I G K G+L + ME +T++R
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 315 SDEDRKDWNFGGE---------------TFCAVVKEYLRKGNIKGLANLINEAQKLEPSN 359
R W+ G + F A++ ++++G ++ EA++L
Sbjct: 293 CYAGR--WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR-------EAEELHKEM 343
Query: 360 IK---ADNSIGY-GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRT 415
I+ + +++ Y +++ DKA+ +LD M + G + + ++ YCK N
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 416 AEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLT 474
+ L ++S G+ D TY+ LI+ + A LF++M RV PD+ SY
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV-SYKI 462
Query: 475 IMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFL 534
++ GL +N PE A + E + ++E+ +N IIH C A +++DA F +
Sbjct: 463 LLDGLCDNGEPE-KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 535 QFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGH 575
+P+ +TY +I G +L+ RK+ DGH
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLF----RKMEEDGH 558
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 144/334 (43%), Gaps = 16/334 (4%)
Query: 226 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 285
CCC ++ A +G + LG PD +TF L ++G + EL M E G
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 286 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 345
+ + L++G +G ++ I R + + T+ V+K + G
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVE----TGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 346 ANLINEAQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDEMNALGGSVGLGVYIP 404
L+ +K+E IK D ++ Y I+ + G D A ++ +EM G + +Y
Sbjct: 232 MELL---RKMEERKIKLD-AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 405 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 464
+++ +C R + L+ ++ + DV + ALI+ + + A L ++M +
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 465 VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGTHDWNSIIHAFCKAGRL 521
+ +Y +++ G + ++ + LD +V P I +N +I+ +CKA +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT----FNILINGYCKANLI 403
Query: 522 EDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 555
+D FR+M+ + TY +LI G+ K
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 112/258 (43%), Gaps = 22/258 (8%)
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 271
+ PDV A +A ++ C + + +AE + M G+ PD +T+ L + + +K
Sbjct: 313 ITPDVVAFSALID-CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 272 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE----DRKDWNFGGE 327
N + LM GC ++ LI+GY K+ NL + R +S D +N +
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKA-NLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 328 TFCAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGI-VNACVSMGLSDKAH 384
FC + G ++ L E ++++ P + + Y I ++ G +KA
Sbjct: 431 GFCEL-------GKLEVAKELFQEMVSRRVRP------DIVSYKILLDGLCDNGEPEKAL 477
Query: 385 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 444
I +++ + +G+Y I+ C ++ +A L + G++ DV+TY+ +I
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 445 MSSQDFQSAFSLFRDMRE 462
A LFR M E
Sbjct: 538 CKKGSLSEADLLFRKMEE 555
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 193/471 (40%), Gaps = 24/471 (5%)
Query: 81 DEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESET 140
+EA + F + + FP N L+ + LG ++KR F + R P V T
Sbjct: 209 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGAR-PTVF---T 264
Query: 141 IHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEES 200
+ M+D M A L M K R VP + N +++ K G L + FEE
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 201 CRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY 260
K +PDV N AL C C+ + M G++P+ +++ L
Sbjct: 324 -------KDMCCEPDVITYN-ALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVD 375
Query: 261 LYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRK 320
+ +G+ ++ + V M G + Y++LI K GNL+ ++ L + +
Sbjct: 376 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS--DAFRLGNEMLQVGV 433
Query: 321 DWNFGGETFCAVVKEYLRKGNIKGLANLIN--EAQKLEPSNIKADNSIGYGIVNACVSMG 378
+WN T+ A++ +K L + + P N+ + N++ +G V A
Sbjct: 434 EWNV--VTYTALIDGLCDAERMKEAEELFGKMDTAGVIP-NLASYNALIHGFVKA----K 486
Query: 379 LSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYD 438
D+A +L+E+ G L +Y + C + A +++ E+ G++ + Y
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 439 ALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD 498
L++ S + L +M+E + ++ ++ GL +N + + + D
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 606
Query: 499 PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 549
++ + ++I CK ++E A F +M P+ Y SL++G
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 145/364 (39%), Gaps = 29/364 (7%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL-------GYLYAVKG 266
P +CN L +L D +R M G RP T+ + G + A +G
Sbjct: 225 PKTRSCNGLLHRFA-KLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARG 283
Query: 267 LQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGG 326
L E+ M G V Y+++I G+ K G L + T+ E+ KD
Sbjct: 284 LFEE-------MKFRGLVPDTVTYNSMIDGFGKVGRL---DDTVCFF---EEMKDMCCEP 330
Query: 327 E--TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKA 383
+ T+ A++ + + G + E + N N + Y +V+A G+ +A
Sbjct: 331 DVITYNALINCFCKFGKLPIGLEFYREMK----GNGLKPNVVSYSTLVDAFCKEGMMQQA 386
Query: 384 HSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIET 443
+M +G Y ++ A CK ++A L E+ G++ +V TY ALI+
Sbjct: 387 IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG 446
Query: 444 SMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEV 503
++ + A LF M A V SY ++ G ++ + L+E+ G I+
Sbjct: 447 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG-IKP 505
Query: 504 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 563
+ + I C ++E A+ M + N Y +L++ Y + L L
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 564 NDVK 567
+++K
Sbjct: 566 DEMK 569
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 405 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR-EA 463
+L + K +T + ++ +G + V TY+ +I+ D ++A LF +M+
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292
Query: 464 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 523
VPD +Y +++ G + R + F +E+ D E +N++I+ FCK G+L
Sbjct: 293 LVPD-TVTYNSMIDGFGKVGRLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 524 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKR 568
+R M +PN +Y +L++ + + + D++R
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 193/449 (42%), Gaps = 58/449 (12%)
Query: 203 VALDEKLEFMK--PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY 260
VAL +++ MK PD+ + + G C + V++A ++ M G +PDE+T+G +
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLK-GRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 261 LYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS-------ME------ 307
G +L M E V YS +I K G+ ME
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 308 -----STILRSLSDEDRKDWNFGGE---------------TFCAVVKEYLRKGNIKGLAN 347
S+++ L ++ + W+ G + TF A++ ++++G +
Sbjct: 279 DVVTYSSLIGGLCNDGK--WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 336
Query: 348 LINE--AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 405
L NE + + P I ++ I C+ +A+ + D M + G + Y +
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLH-----EANQMFDLMVSKGCEPDIVTYSIL 391
Query: 406 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 465
+ +YCK R + L EISS GL + TY+ L+ S +A LF++M V
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 466 PDLKGSYLTIMTGLMENHRPELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 524
P +Y ++ GL +N EL A + E + R+ +G +N IIH C A +++DA
Sbjct: 452 PPSVVTYGILLDGLCDNG--ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509
Query: 525 RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNL 584
F ++ +P+ TY +I G ML+ RK+ DG F +N+
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF----RKMKEDGCTPDDFTYNI 565
Query: 585 VDAFLYAMVKGGFFDAAMQVVEKSHEMKI 613
+ + A + G ++++++E EMK+
Sbjct: 566 L---IRAHLGGSGLISSVELIE---EMKV 588
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 164/394 (41%), Gaps = 27/394 (6%)
Query: 226 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 285
C C + + A V+G LG PD +TF L + ++G + L M E
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 286 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE--TFCAVVKEYLRKGNIK 343
V S LI+G G ++ I R + ++ F + T+ V+ + GN
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMV------EYGFQPDEVTYGPVLNRLCKSGN-S 226
Query: 344 GLANLINEAQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDEMNALGGSVGLGVY 402
LA ++ +K+E NIKA + + Y IV ++ G D A S+ +EM G + Y
Sbjct: 227 ALA--LDLFRKMEERNIKA-SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 403 IPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE 462
++ C + + + ++ E+ + DV T+ ALI+ + A L+ +M
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 463 ARVPDLKGSYLTIMTGLMEN---HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAG 519
+ +Y +++ G + H M + +P I ++ +I+++CKA
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT----YSILINSYCKAK 399
Query: 520 RLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIK 579
R++D R FR ++ PN TY +L+ G+ + K N K +G+
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK-------LNAAKELFQEMVSRGVP 452
Query: 580 FDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKI 613
L + G + A+++ EK + ++
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 149/357 (41%), Gaps = 38/357 (10%)
Query: 140 TIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEE 199
T +L+ + + +A A L R M + R + +++++ + K G+ L +F E
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 200 SCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLG 259
+++ +K DV ++ + G C + D +++ M + PD +TF L
Sbjct: 271 M-------EMKGIKADVVTYSSLIGGLCND-GKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 260 YLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNL---ASMESTILRSLSD 316
++ +G + EL M G + + Y++LI G+ K L M ++ +
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 317 EDRKDWNFGGETFCAVVK-----EYLRKGNIKGL----------------ANLINEAQKL 355
D ++ ++C + R+ + KGL + +N A++L
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 356 EPSNIK---ADNSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 411
+ + + YGI ++ G +KA I ++M ++G+G+Y I+ C
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 412 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE-ARVPD 467
++ +A L +S G++ DV TY+ +I A LFR M+E PD
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 169/420 (40%), Gaps = 58/420 (13%)
Query: 239 VVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYV 298
V + G P +T+G L LY G K E+ +M E G + YS +I+G+V
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 299 KSGNLASMESTILRSLSDEDRKD---WNFGGETFCAVVKEYLRKGNIKGLANLINEAQKL 355
K + A+ + + + + D +N FC + GN+ + E QKL
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGM-------GNMDRAIQTVKEMQKL 583
Query: 356 E--PSNIKADNSI-GY-----------------------------GIVNACVSMGLSDKA 383
P+ I GY G++N V +KA
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 384 HSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIET 443
ILDEM G S Y I++ Y T +A + + GL +D+ TY+AL++
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703
Query: 444 SMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELM-AAFLDEVVGDPRIE 502
S QSA ++ ++M +P Y ++ G R ++ AA L + + ++
Sbjct: 704 CCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA--RRGDVWEAADLIQQMKKEGVK 761
Query: 503 VGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLML 562
H + S I A KAG + A +T M L +PN +TY +LI G+ A L
Sbjct: 762 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 821
Query: 563 WNDVKRKLSSDGHKGIKFD----HNLVDAFLY--AMVKGGFFDAAMQVVEKSHEMKIFVD 616
+ ++K GIK D H L+ + L ++ + + M + ++ E + VD
Sbjct: 822 YEEMKA-------MGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVD 874
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/326 (18%), Positives = 134/326 (41%), Gaps = 43/326 (13%)
Query: 243 MSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGN 302
M G+ P + L + YAV ++ M E G V YS ++ G+ K+G+
Sbjct: 335 MRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGH 394
Query: 303 LASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKA 362
+ + + R + ++ + + N++ L+ E +E I A
Sbjct: 395 AEAADYW----FDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVRE---MEEEGIDA 447
Query: 363 DNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILV 422
+I + +++ + K + + G + + Y ++ Y K + ++A +
Sbjct: 448 PIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVS 507
Query: 423 MEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMEN 482
+ G++ +++TY +I + +D+ +AF++F DM + E
Sbjct: 508 RVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM------------------VKEG 549
Query: 483 HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 542
+P+++ +N+II AFC G ++ A +T + M L+ P +T
Sbjct: 550 MKPDVIL------------------YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 543 YLSLINGYVSAEKHFNVLMLWNDVKR 568
++ +I+GY + L +++ ++R
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRR 617
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 117/287 (40%), Gaps = 17/287 (5%)
Query: 329 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 388
F +VK Y R+G++ +++ I + I +++A D+A S +
Sbjct: 312 FGLMVKFYGRRGDMHRARETF---ERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVR 368
Query: 389 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 448
+M G + L Y I+ + K A E L+ Y +I +
Sbjct: 369 KMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC 428
Query: 449 DFQSAFSLFRDMREARVPDLKGSYLTIMTG---LMENHRPELMAAFLDEVVGDPRIEVGT 505
+ + A +L R+M E + Y T+M G + + + ++ L E P +
Sbjct: 429 NMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT-- 486
Query: 506 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 565
+ +I+ + K G++ A R M + N +TY +ING+V + N ++ D
Sbjct: 487 --YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 566 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMK 612
+ + +G+K D L + + A G D A+Q V++ +++
Sbjct: 545 MVK-------EGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 175/402 (43%), Gaps = 29/402 (7%)
Query: 226 CCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVL---MGE 280
C C ++ A ++G M LG P +T L G+ + +I+E L M E
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG-----NRISEAVALVDQMVE 163
Query: 281 FGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKG 340
G V ++ L+ G + + + + R + + D T+ AV+ ++G
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL----VTYGAVINGLCKRG 219
Query: 341 NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 400
NL+N K+E I+AD I ++++ D A ++ EM+ G +
Sbjct: 220 EPDLALNLLN---KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 401 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 460
Y ++ C R ++A+ L+ ++ + +V T+++LI+ A LF +M
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 461 REARVPDLKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAG 519
+ + +Y +++ G M + E F V D +V T +N++I+ FCKA
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT--YNTLINGFCKAK 394
Query: 520 RLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG-HKGI 578
++ D FR M+ N TY +LI+G+ A N M++ +++ SDG H I
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF----KQMVSDGVHPNI 450
Query: 579 KFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 620
+ L+D + K G + AM V E + K+ D + Y
Sbjct: 451 MTYNTLLD----GLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 151/376 (40%), Gaps = 42/376 (11%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY-LYAVKGLQEKIN 272
P + N+ L G C +++A +V M +G +PD +TF L + L+ E +
Sbjct: 133 PSIVTLNSLLNGFC-HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 273 ELEVLMGEFGCSNKKVFYSNLISGYVKSGN-------LASME-----------STILRSL 314
+E ++ + GC V Y +I+G K G L ME ST++ SL
Sbjct: 192 LVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 315 -------------SDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA--QKLEPSN 359
++ D K T+ +++ G + L+++ +K+ P N
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP-N 309
Query: 360 IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 419
+ NS+ ++A G +A + DEM + Y ++ +C +R EA
Sbjct: 310 VVTFNSL----IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 420 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 479
+ + S DV TY+ LI ++ LFRDM + +Y T++ G
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 480 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 539
+ + ++V D + +N+++ CK G+LE A F + + EP+
Sbjct: 426 FQASDCDNAQMVFKQMVSDG-VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 540 DQTYLSLINGYVSAEK 555
TY + G A K
Sbjct: 485 IYTYNIMSEGMCKAGK 500
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 128/324 (39%), Gaps = 45/324 (13%)
Query: 228 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 287
C+ V DA + M N G+RPD T
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFT--------------------------------- 277
Query: 288 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 347
YS+LIS G + R LSD + N TF +++ + ++G +
Sbjct: 278 --YSSLISCLCNYGRWSDAS----RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 348 LINEA-QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPIL 406
L +E Q+ NI NS+ +N D+A I M + + Y ++
Sbjct: 332 LFDEMIQRSIDPNIVTYNSL----INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 407 KAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVP 466
+CK + + L ++S GL + TY LI + D +A +F+ M V
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 467 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 526
+Y T++ GL +N + E A + E + ++E + +N + CKAG++ED
Sbjct: 448 PNIMTYNTLLDGLCKNGKLE-KAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 527 TFRRMNFLQFEPNDQTYLSLINGY 550
F ++ +P+ Y ++I+G+
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGF 530
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 135/352 (38%), Gaps = 68/352 (19%)
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 271
++PDV ++L C C +DA R++ M + P+ +TF L +A +G K+
Sbjct: 271 IRPDVFT-YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG---KL 326
Query: 272 NELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE---DRKDWNFG 325
E E L E V Y++LI+G+ L + +S + D +N
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 326 GETFCAVVK-----EYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGL 379
FC K E R + +GL N++ Y +++
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVG----------------NTVTYTTLIHGFFQASD 430
Query: 380 SDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDA 439
D A + +M + G + Y +L CK + +A ++ + S ++ D+ TY+
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 440 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 499
+ E + + + LF + LKG +P+++A
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSL------SLKGV------------KPDVIA---------- 522
Query: 500 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV 551
+N++I FCK G E+A F +M P+ TY +LI ++
Sbjct: 523 --------YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL 566
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 134/333 (40%), Gaps = 48/333 (14%)
Query: 168 RYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCC 227
R P + N L++ K G L +F+E + ++D P++ N+ + G C
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID-------PNIVTYNSLINGFC 356
Query: 228 CELESVTDAERVVGTMSNLGVRPDELTF-----GFLGYLYAVKGLQEKINELEVLMGEFG 282
+ + +A+++ M + PD +T+ GF V G+ EL M G
Sbjct: 357 MH-DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM-----ELFRDMSRRG 410
Query: 283 CSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKD---WNFGGETFCA-------- 331
V Y+ LI G+ ++ + + + + +SD + +N + C
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 332 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 391
VV EYL+K K+EP +I N + G+ A G + + ++
Sbjct: 471 VVFEYLQK-------------SKMEP-DIYTYNIMSEGMCKA----GKVEDGWDLFCSLS 512
Query: 392 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 451
G + Y ++ +CK+ EA L +++ G D TY+ LI + D
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 452 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHR 484
++ L ++MR R +Y ++T ++ + R
Sbjct: 573 ASAELIKEMRSCRFAGDASTY-GLVTDMLHDGR 604
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 169/408 (41%), Gaps = 48/408 (11%)
Query: 213 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 272
KPD+ N + G C + +A ++ M G +P+ +T+G + + G
Sbjct: 190 KPDLITINTLVNGLCLSGKE-AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 273 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNL------------ASMESTIL--------- 311
EL M E V YS +I G K G+L + + I+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 312 ----------RSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 361
+ L D ++ N TF ++ ++++G ++ EA++L I
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR-------EAEELHKEMIH 361
Query: 362 ---ADNSIGY-GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 417
A ++I Y +++ DKA+ ++D M + G + + ++ YCK NR +
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 418 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 477
L ++S G+ D TY+ LI+ A LF++M +VP +Y ++
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 478 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFE 537
GL +N E A + E + ++E+ +N IIH C A +++DA F + +
Sbjct: 482 GLCDNGESE-KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 538 PNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLV 585
P +TY +I G +L+ RK+ DGH + +N++
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLF----RKMEEDGHAPDGWTYNIL 584
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 144/338 (42%), Gaps = 24/338 (7%)
Query: 226 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 285
C C + A +G + LG P+ +TF L ++G + EL M E G
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 286 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE----TFCAVVKEYLRKGN 341
+ + L++G SG A E+ +L K +G + T+ V+ + G
Sbjct: 192 DLITINTLVNGLCLSGKEA--EAMLLID------KMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 342 IKGLANLINEAQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDEMNALGGSVGLG 400
L+ +K+E NIK D ++ Y I+ + G D A ++ +EM G + +
Sbjct: 244 TALAMELL---RKMEERNIKLD-AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 401 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 460
Y ++ +C R + L+ ++ + +V T+ LI++ + + A L ++M
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 461 REARVPDLKGSYLTIMTGLM-ENH--RPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCK 517
+ +Y +++ G ENH + M + DP I +N +I+ +CK
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT----FNILINGYCK 415
Query: 518 AGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 555
A R++D FR+M+ + TY +LI G+ K
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 149/360 (41%), Gaps = 45/360 (12%)
Query: 226 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 285
C C ++ A V+G M LG P +TFG L + + + L +LM + G
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 286 KKVFYSNLISGYVKSGNLA-------SME-----------STIL-------------RSL 314
V Y+ LI G K+G L ME +T+L R L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 315 SDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKAD---NSIGY-GI 370
D ++ N TF A++ ++++GN+ +EAQ+L I++ N++ Y I
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNL-------DEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 371 VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGL 430
+N G A D M + G + Y ++ +CK E L +S G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 431 QLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMA 489
D+ TY+ LI + A +F M RV PD+ ++ ++ GL N E
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDII-THCILLHGLCVNGEIESAL 406
Query: 490 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 549
D++ + +G +N +IH CKA ++E A F R+ +P+ +TY +I G
Sbjct: 407 VKFDDMRESEKY-IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 123/298 (41%), Gaps = 11/298 (3%)
Query: 340 GNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGL 399
N++ +I +QK+E I D +++ A S+L +M LG +
Sbjct: 82 ANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSI 141
Query: 400 GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 459
+ +L +C NR +A LV+ + SG + +V Y+ LI+ + + A L +
Sbjct: 142 VTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNE 201
Query: 460 MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAG 519
M + + +Y T++TGL + R A L +++ I + ++I F K G
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM-KRSINPDVVTFTALIDVFVKQG 260
Query: 520 RLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIK 579
L++A+ ++ M +PN+ TY S+ING + + D K+ KG
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY-------DAKKTFDLMASKGCF 313
Query: 580 FDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKLKVAKLR 637
+ + + K D M++ ++ D + Y H +V KLR
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI---HGYCQVGKLR 368
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 165/385 (42%), Gaps = 29/385 (7%)
Query: 228 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 287
C++ A ++ M ++PD + + + G L M E G +
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 288 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 347
Y+ +I G+ G + + R L D ++ N TF A++ +++G +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQ----RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 348 LINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 405
L +E + + P + NS+ YG C D H M L S + + I
Sbjct: 388 LCDEMLHRCIFPDTVTY-NSMIYGF---CKHNRFDDAKH-----MFDLMASPDVVTFNTI 438
Query: 406 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 465
+ YC+ R E L+ EIS GL + TY+ LI + +A LF++M V
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 466 -PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 524
PD + ++ G EN + E A L EV+ +I++ T +N IIH CK ++++A
Sbjct: 499 CPDTITCNI-LLYGFCENEKLE-EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 525 RRTFRRMNFLQFEPNDQTYLSLINGYV--SAEKHFNVLMLWNDVKRKLSSDGHKGIKFDH 582
F + EP+ QTY +I+G+ SA NVL K+ +GH+ D+
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF------HKMKDNGHEP---DN 607
Query: 583 NLVDAFLYAMVKGGFFDAAMQVVEK 607
+ + + +K G D +++++ +
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISE 632
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 177/413 (42%), Gaps = 40/413 (9%)
Query: 226 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMG------ 279
C C+ ++ + G ++ LG +PD +TF L L+ + L+++I+E L G
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL--LHGL-CLEDRISEALALFGYMVETG 206
Query: 280 ------------EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 327
E G + + ++ LI+G G + + + + + K +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG----KGLHIDVV 262
Query: 328 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 387
T+ +V + G+ K NL++ K+E ++IK D I I++ G A +
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLS---KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 388 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 447
EM G + + Y ++ +C R ++A L+ ++ + DV T++ALI S+
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 448 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 507
A L +M + +Y +++ G +++R + D ++ P +
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD-LMASPDVVT---- 434
Query: 508 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 567
+N+II +C+A R+++ + R ++ N TY +LI+G+ + L D+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN----LNAAQDLF 490
Query: 568 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 620
+++ S G+ D + LY + + A+++ E KI +D Y
Sbjct: 491 QEMIS---HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 165/385 (42%), Gaps = 29/385 (7%)
Query: 228 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 287
C++ A ++ M ++PD + + + G L M E G +
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 288 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 347
Y+ +I G+ G + + R L D ++ N TF A++ +++G +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQ----RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 348 LINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 405
L +E + + P + NS+ YG C D H M L S + + I
Sbjct: 388 LCDEMLHRCIFPDTVTY-NSMIYGF---CKHNRFDDAKH-----MFDLMASPDVVTFNTI 438
Query: 406 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 465
+ YC+ R E L+ EIS GL + TY+ LI + +A LF++M V
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 466 -PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 524
PD + ++ G EN + E A L EV+ +I++ T +N IIH CK ++++A
Sbjct: 499 CPDTITCNI-LLYGFCENEKLE-EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 525 RRTFRRMNFLQFEPNDQTYLSLINGYV--SAEKHFNVLMLWNDVKRKLSSDGHKGIKFDH 582
F + EP+ QTY +I+G+ SA NVL K+ +GH+ D+
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF------HKMKDNGHEP---DN 607
Query: 583 NLVDAFLYAMVKGGFFDAAMQVVEK 607
+ + + +K G D +++++ +
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISE 632
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 177/413 (42%), Gaps = 40/413 (9%)
Query: 226 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMG------ 279
C C+ ++ + G ++ LG +PD +TF L L+ + L+++I+E L G
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL--LHGL-CLEDRISEALALFGYMVETG 206
Query: 280 ------------EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 327
E G + + ++ LI+G G + + + + + K +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG----KGLHIDVV 262
Query: 328 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 387
T+ +V + G+ K NL++ K+E ++IK D I I++ G A +
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLS---KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 388 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 447
EM G + + Y ++ +C R ++A L+ ++ + DV T++ALI S+
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 448 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 507
A L +M + +Y +++ G +++R + D ++ P +
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD-LMASPDVVT---- 434
Query: 508 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 567
+N+II +C+A R+++ + R ++ N TY +LI+G+ + L D+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN----LNAAQDLF 490
Query: 568 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 620
+++ S G+ D + LY + + A+++ E KI +D Y
Sbjct: 491 QEMIS---HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 160/342 (46%), Gaps = 21/342 (6%)
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 271
++PD+ ++ + G C S+ DA V G M +G++ D + L L +
Sbjct: 9 IEPDIVTASSLVNGFCLS-NSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLV--V 65
Query: 272 NELEVL--MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 329
LEVL M + G S V YS+LI+G KSG LA E R L + D K N TF
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAE----RRLHEMDSKKINPNVITF 121
Query: 330 CAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 387
A++ Y ++G + + ++ ++P N+ +S+ YG+ C+ + D+A +L
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDP-NVFTYSSLIYGL---CMHNRV-DEAIKML 176
Query: 388 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 447
D M + G + + Y + + K +R + L+ ++ G+ + + + LI+ +
Sbjct: 177 DLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQA 236
Query: 448 QDFQSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMENHRPE-LMAAFLDEVVGDPRIEVGT 505
A +F M +P+++ SY ++ GL N E ++ F E + R ++
Sbjct: 237 GKIDLALGVFGYMTSNGLIPNIR-SYNIVLAGLFANGEVEKALSRF--EHMQKTRNDLDI 293
Query: 506 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 547
+ +IH CKA +++A F ++ F + EP+ + Y +I
Sbjct: 294 ITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 21/322 (6%)
Query: 233 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 292
+ D ER++ MS G+ PD LT L ++Y+ G E+ E + +G + Y
Sbjct: 400 IEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEA 459
Query: 293 LISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA 352
+I GYV +G E R + + K+ E + A+++ Y + G+ G A + +
Sbjct: 460 MILGYVNAGKPKLGE----RLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSM 515
Query: 353 QKLEPSNIKADNSIGYG----IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKA 408
Q +D + + V A G DKA S DEM LG +++A
Sbjct: 516 Q------YASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRA 569
Query: 409 YCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF---RDMREARV 465
Y EN +A L++++ G+++ V TY L++ + + A L + EA
Sbjct: 570 YKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPP 629
Query: 466 PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDAR 525
+L+ S + +G+ N + L A + E R ++G ++++ +I A + G +DAR
Sbjct: 630 FELQVSLCCMYSGV-RNEKKTLQALGVLEA---KRDQMGPNEFDKVISALKRGGFEKDAR 685
Query: 526 RTFRRMNFLQFEPNDQTYLSLI 547
R ++ M +F P+ + + ++
Sbjct: 686 RMYKYMEARKFLPSQRLQMDMV 707
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 166/383 (43%), Gaps = 26/383 (6%)
Query: 172 PFAMWGNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELE 231
P N+L+ +GN+ L +F++ + + P+V N ++G C +L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKM-------ETKGCLPNVVTYNTLIDGYC-KLR 254
Query: 232 SVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYS 291
+ D +++ +M+ G+ P+ +++ + +G ++++ + M G S +V Y+
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 292 NLISGYVKSGNLAS---MESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANL 348
LI GY K GN M + +LR T+ +++ + GN+
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLR-------HGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 349 INEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKA 408
+++ + + + +V+ G ++A+ +L EMN G S + Y ++
Sbjct: 368 LDQ---MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 409 YCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDL 468
+C + +A ++ ++ GL DV +Y ++ S D A + R+M E +
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 469 KGSYLTIMTGLMENHRPELMAAFLDEV--VGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 526
+Y +++ G E R + +E+ VG P E + ++I+A+C G LE A +
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF---TYTALINAYCMEGDLEKALQ 541
Query: 527 TFRRMNFLQFEPNDQTYLSLING 549
M P+ TY LING
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLING 564
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 168/401 (41%), Gaps = 42/401 (10%)
Query: 203 VALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLY 262
V L + FM P V + NA L+ +++ AE V M V P+ T+ L +
Sbjct: 157 VHLAQAHGFM-PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGF 215
Query: 263 AVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVK------------SGNLASMESTI 310
G + L M GC V Y+ LI GY K S L +E +
Sbjct: 216 CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL 275
Query: 311 LR-------------------SLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE 351
+ L++ +R+ ++ T+ ++K Y ++GN + E
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 352 AQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAY 409
+ L PS I + ++++ G ++A LD+M G Y ++ +
Sbjct: 336 MLRHGLTPSVITYTS-----LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 410 CKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDL 468
++ EA ++ E++ +G V TY+ALI + + A ++ DM+E + PD+
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 469 KGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTF 528
SY T+++G ++ + E+V + I+ T ++S+I FC+ R ++A +
Sbjct: 451 V-SYSTVLSGFCRSYDVDEALRVKREMV-EKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 529 RRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 569
M + P++ TY +LIN Y L L N++ K
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 233 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG-LQEKINELEVLMGEFGCSNKKVFYS 291
+ +A RV+ M++ G P +T+ L + V G +++ I LE M E G S V YS
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED-MKEKGLSPDVVSYS 454
Query: 292 NLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE 351
++SG+ +S ++ LR + K T+ ++++ + + K +L E
Sbjct: 455 TVLSGFCRSYDV----DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 352 AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 411
++ + D ++NA G +KA + +EM G + Y ++ K
Sbjct: 511 MLRV---GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 412 ENRTAEATILVMEI-SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 470
++RT EA L++++ + DV TY LIE S+ +F+S SL + +
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDV-TYHTLIENC-SNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 471 SYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRR 530
M G +NH+P+ A +N +IH C+AG + A ++
Sbjct: 626 QVFESMLG--KNHKPDGTA------------------YNIMIHGHCRAGDIRKAYTLYKE 665
Query: 531 MNFLQFEPNDQTYLSLI 547
M F + T ++L+
Sbjct: 666 MVKSGFLLHTVTVIALV 682
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 175/405 (43%), Gaps = 27/405 (6%)
Query: 170 FVPFAMWGNVLVEIIRKSGNLAAFLPVFEES-CRVALDEKLEFMKPDVAACNAALEGCCC 228
FVP + N L+ + S + + F E+ +V LD V + ++GCC
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLD---------VYSFGILIKGCC- 174
Query: 229 ELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKV 288
E + + ++ ++ G P+ + + L KG EK +L MG+ G +
Sbjct: 175 EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
Query: 289 FYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANL 348
Y+ LI+G K+G + + ED N T+ V+ + + G K +
Sbjct: 235 TYTVLINGLFKNG--VKKQGFEMYEKMQEDGVFPNL--YTYNCVMNQLCKDGRTKDAFQV 290
Query: 349 INEAQKLEPS-NIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILK 407
+E ++ S NI N++ G+ C M L++ A+ ++D+M + G + L Y ++
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGL---CREMKLNE-ANKVVDQMKSDGINPNLITYNTLID 346
Query: 408 AYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPD 467
+C + +A L ++ S GL + TY+ L+ D A + ++M E +
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Query: 468 LKGSYLTIMTGLMENHRPELMAAF---LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 524
K +Y ++ + E ++E+ P + H ++ +IH FC G++ +A
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV----HTYSVLIHGFCIKGQMNEA 462
Query: 525 RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 569
R F+ M EPN+ Y ++I GY + L L +++ K
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 176/389 (45%), Gaps = 25/389 (6%)
Query: 223 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLMGE 280
L C C ++ A ++G M LG P +T L GY + K + + + ++ ++ E
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG-KRISDAVALVDQMV-E 183
Query: 281 FGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKG 340
G + ++ LI G + + + R + + + T+ VV ++G
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL----VTYGVVVNGLCKRG 239
Query: 341 NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 400
+I NL+N K+E + I+A+ I ++++ D A ++ EM G +
Sbjct: 240 DIDLAFNLLN---KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 401 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 460
Y ++ C R ++A+ L+ ++ + +V T++ALI+ + A L+ +M
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 461 REARV-PDLKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKA 518
+ + PD+ +Y +++ G M + E F + D V T +N++I+ FCKA
Sbjct: 357 IKRSIDPDIF-TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT--YNTLINGFCKA 413
Query: 519 GRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG-HKG 577
R+++ FR M+ N TY +LI+G+ A N M++ +++ SDG H
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF----KQMVSDGVHPN 469
Query: 578 IKFDHNLVDAFLYAMVKGGFFDAAMQVVE 606
I + L+D + K G + AM V E
Sbjct: 470 IMTYNTLLD----GLCKNGKLEKAMVVFE 494
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 153/378 (40%), Gaps = 44/378 (11%)
Query: 213 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEK 270
+P + ++ L G C + ++DA +V M +G RPD +TF L + GL K
Sbjct: 152 EPSIVTLSSLLNGYC-HGKRISDAVALVDQMVEMGYRPDTITFTTL-----IHGLFLHNK 205
Query: 271 INELEVL---MGEFGCSNKKVFYSNLISGYVKSGN-------LASME-----------ST 309
+E L M + GC V Y +++G K G+ L ME ST
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 310 ILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKG---LANLINEAQKLEPSNIKAD--- 363
++ SL +D F + + +R I ++ L N + + S + +D
Sbjct: 266 VIDSLCKYRHEDDAL--NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 364 -----NSIGY-GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 417
N + + +++A V G +A + DEM + Y ++ +C +R E
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 418 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 477
A + + S +V TY+ LI ++ LFR+M + + +Y T++
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 478 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFE 537
G + + ++V D + +N+++ CK G+LE A F + + E
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDG-VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 538 PNDQTYLSLINGYVSAEK 555
P TY +I G A K
Sbjct: 503 PTIYTYNIMIEGMCKAGK 520
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 4/239 (1%)
Query: 312 RSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIV 371
R LSD + N TF A++ ++++G + L +E K +I D ++
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK---RSIDPDIFTYSSLI 372
Query: 372 NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQ 431
N D+A + + M + + Y ++ +CK R E L E+S GL
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 432 LDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAF 491
+ TY LI ++D +A +F+ M V +Y T++ GL +N + E A
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE-KAMV 491
Query: 492 LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
+ E + ++E + +N +I CKAG++ED F ++ +P+ Y ++I+G+
Sbjct: 492 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 161/360 (44%), Gaps = 26/360 (7%)
Query: 199 ESCRVALDEKLEFMKP--DVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG 256
E+ + L+ LE MKP +V N ++ + + + +E++ M G++PD TF
Sbjct: 156 ETAPLVLNNLLETMKPSREVILYNVTMK-VFRKSKDLEKSEKLFDEMLERGIKPDNATFT 214
Query: 257 FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSD 316
+ G+ ++ E M FGC V + +I Y ++GN+ + SL D
Sbjct: 215 TIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNV-----DMALSLYD 269
Query: 317 EDRKD-WNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACV 375
R + W TF +++ Y GN G N+ E + L +K + I +++
Sbjct: 270 RARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKAL---GVKPNLVIYNRLID--- 323
Query: 376 SMGLSDK---AHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQL 432
SMG + + A I ++ G + Y +++AY + +A + E+ GL L
Sbjct: 324 SMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSL 383
Query: 433 DVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG-SYLTIMTGLMENHR-PELMAA 490
V Y+ L+ ++ AF +F+DM+ D ++ +++T + R E AA
Sbjct: 384 TVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAA 443
Query: 491 FLD--EVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 548
L E +P + V T S+I + KA +++D RTF ++ L P+D+ L+N
Sbjct: 444 LLQMREAGFEPTLFVLT----SVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLN 499
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 135/321 (42%), Gaps = 16/321 (4%)
Query: 235 DAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLI 294
D E V M ++P+ TF + G K ++ M +GCS V Y+ LI
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 295 SGYVKSGNLASM--ESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA 352
GY K G M +L+ + + D TF ++ + + N+ G + E
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSP---NLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 353 --QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC 410
Q ++P N+ + NS+ G+ N G +A S+ D+M + G L Y ++ +C
Sbjct: 323 LDQDVKP-NVISYNSLINGLCNG----GKISEAISMRDKMVSAGVQPNLITYNALINGFC 377
Query: 411 KENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLK 469
K + EA + + G Y+ LI+ F+L +M RE VPD+
Sbjct: 378 KNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV- 436
Query: 470 GSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFR 529
G+Y ++ GL N E D++ ++ T ++ ++ +C+ G A +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVT--FHILMEGYCRKGESRKAAMLLK 494
Query: 530 RMNFLQFEPNDQTYLSLINGY 550
M+ + +P TY ++ GY
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGY 515
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 161/392 (41%), Gaps = 32/392 (8%)
Query: 201 CRVALDEKLEFM--------KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDE 252
CRV+ E LE + KP + N + G C V+DA ++ M G +P+E
Sbjct: 172 CRVS--EALELVDRMVEMGHKPTLITLNTLVNGLCLN-GKVSDAVVLIDRMVETGFQPNE 228
Query: 253 LTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILR 312
+T+G + + G EL M E V YS +I G K G+L
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL----DNAFN 284
Query: 313 SLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGI 370
++ + K + T+ ++ + G A L+ + +K+ P N + + +
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP------NVVTFSV 338
Query: 371 -VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
+++ V G +A +L EM G + Y ++ +CKENR EA +V + S G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 489
D+ T++ LI + LFR+M V +Y T++ G ++ + E+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 490 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 549
E+V R+ + ++ C G LE A F ++ + E + Y+ +I+G
Sbjct: 459 KLFQEMVS-RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG 517
Query: 550 YVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFD 581
+A K +D S KG+K D
Sbjct: 518 MCNASK-------VDDAWDLFCSLPLKGVKLD 542
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 142/334 (42%), Gaps = 16/334 (4%)
Query: 226 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 285
C C ++ A +G + LG PD + F L ++ + EL M E G
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 286 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 345
+ + L++G +G ++ I R + + T+ V+ + G
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVE----TGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 346 ANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIP 404
L+ +K+E NIK D ++ Y I++ G D A ++ +EM G + Y
Sbjct: 248 MELL---RKMEERNIKLD-AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 405 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 464
++ +C R + L+ ++ + +V T+ LI++ + + A L ++M +
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 465 VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG---DPRIEVGTHDWNSIIHAFCKAGRL 521
+ +Y +++ G + +R E +D ++ DP I +N +I+ +CKA R+
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI----MTFNILINGYCKANRI 419
Query: 522 EDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 555
+D FR M+ N TY +L+ G+ + K
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 125/307 (40%), Gaps = 16/307 (5%)
Query: 160 LVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAAC 219
L+R M K R P + +VL++ K G L + +E + + P+
Sbjct: 320 LLRDMIK-RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI-------APNTITY 371
Query: 220 NAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMG 279
N+ ++G C E + +A ++V M + G PD +TF L Y + EL M
Sbjct: 372 NSLIDGFCKE-NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 280 EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRK 339
G V Y+ L+ G+ +SG L + +S R D ++ ++
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI----VSYKILLDGLCDN 486
Query: 340 GNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGL 399
G ++ + K+E S ++ D I I++ + D A + + G +
Sbjct: 487 GELEKALEIFG---KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Query: 400 GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 459
Y ++ C+++ ++A IL +++ G D TY+ LI + D +A L +
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE 603
Query: 460 MREARVP 466
M+ + P
Sbjct: 604 MKSSGFP 610
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 115/534 (21%), Positives = 216/534 (40%), Gaps = 73/534 (13%)
Query: 117 NLKRAFASAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMW 176
N+++ + V + +RN +V+ T ++ M + A+ +V+ M + ++
Sbjct: 397 NVRQGYELLVEMKKRN-IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIY 455
Query: 177 GNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDA 236
++ ++ S F ++ RV + K + + PD+ N+ + G + + + +A
Sbjct: 456 TTLIKTFLQNSR--------FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS-KAKRMDEA 506
Query: 237 ERVVGTMSNLGVRPDELTFGFL--GYLYAVK--GLQEKINELEVLMGEFGCSNKKVFYSN 292
+ M G++P+ T+G GY+ A + + + E M E G KV +
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE----MRECGVLPNKVLCTG 562
Query: 293 LISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA 352
LI+ Y K G + S RS+ D+ +T+ ++ + + + E
Sbjct: 563 LINEYCKKGKVIEACSA-YRSMVDQGILG---DAKTYTVLMNGLFKNDKVDDAEEIFRE- 617
Query: 353 QKLEPSNIKADNSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 411
+ I D YG+ +N +G KA SI DEM G + + +Y +L +C+
Sbjct: 618 --MRGKGIAPD-VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 412 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR-EARVPDLKG 470
+A L+ E+S GL + TY +I+ S D AF LF +M+ + VPD
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD-SF 733
Query: 471 SYLTIMTG----------------------------------LMENHRPELMAAFLDEVV 496
Y T++ G + + + EL L+ ++
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 497 GDPRIEVGTHD---WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 553
G + +N +I CK G LE A+ F +M P TY SL+NGY
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 554 EKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEK 607
+ + ++++ GI+ DH + + A +K G A+ +V++
Sbjct: 854 GRRAEMFPVFDEAI-------AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/503 (20%), Positives = 199/503 (39%), Gaps = 41/503 (8%)
Query: 77 TSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVL 136
T + D A K +S+ P K + LI L + + + K S + M+ + L
Sbjct: 255 TLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAK----SLLVEMDSLGVSL 310
Query: 137 ESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPV 196
++ T ++D + A A LV M + + M+ + + ++ K G + +
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMY-DCCICVMSKEGVMEKAKAL 369
Query: 197 FEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG 256
F+ L P A + +EG C E ++V ++ M + T+G
Sbjct: 370 FDGMIASGL-------IPQAQAYASLIEGYCRE-KNVRQGYELLVEMKKRNIVISPYTYG 421
Query: 257 FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSD 316
+ G + + M GC V Y+ LI ++++ +R L
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA----MRVL-- 475
Query: 317 EDRKDWNFGGETFCAVVKEYLRKGNIKGL--ANLINEAQKLEPSNIK---ADNSIGYG-I 370
++ K+ + FC I GL A ++EA+ ++ N+ YG
Sbjct: 476 KEMKEQGIAPDIFC-------YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 371 VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGL 430
++ + A + EM G + ++ YCK+ + EA + G+
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588
Query: 431 QLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMA 489
D +TY L+ + A +FR+MR + PD+ SY ++ G + + +
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF-SYGVLINGFSKLGNMQKAS 647
Query: 490 AFLDEVVGD---PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSL 546
+ DE+V + P + + +N ++ FC++G +E A+ M+ PN TY ++
Sbjct: 648 SIFDEMVEEGLTPNVII----YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 547 INGYVSAEKHFNVLMLWNDVKRK 569
I+GY + L++++K K
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLK 726
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 162/400 (40%), Gaps = 54/400 (13%)
Query: 152 NTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEF 211
N A+ A ALV M + +G V V + K G++ L + ++ EK +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTV-VNGLCKRGDIDLALSLLKKM------EKGK- 253
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 271
++ DV N ++G C + + + DA + M N G+RPD T
Sbjct: 254 IEADVVIYNTIIDGLC-KYKHMDDALNLFTEMDNKGIRPDVFT----------------- 295
Query: 272 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 331
YS+LIS G + R LSD + N TF A
Sbjct: 296 ------------------YSSLISCLCNYGRWSDAS----RLLSDMIERKINPNVVTFSA 333
Query: 332 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 391
++ ++++G + L +E K +I D ++N D+A + + M
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIK---RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 392 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 451
+ + Y ++K +CK R E L E+S GL + TY LI ++D
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 452 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHR-PELMAAFLDEVVGDPRIEVGTHDWNS 510
+A +F+ M V +Y ++ GL +N + + M F E + +E + +N
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF--EYLQRSTMEPDIYTYNI 508
Query: 511 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
+I CKAG++ED F ++ PN Y ++I+G+
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 170/415 (40%), Gaps = 65/415 (15%)
Query: 213 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEK 270
+PD+ ++ L G C + ++DA +V M +G +PD TF L + GL K
Sbjct: 150 EPDIVTLSSLLNGYC-HSKRISDAVALVDQMVEMGYKPDTFTFTTL-----IHGLFLHNK 203
Query: 271 INELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 327
+E L+ + GC V Y +++G K
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK---------------------------- 235
Query: 328 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 387
+G+I +L+ +K+E I+AD I I++ D A ++
Sbjct: 236 -----------RGDIDLALSLL---KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 388 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 447
EM+ G + Y ++ C R ++A+ L+ ++ + +V T+ ALI+ +
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 448 QDFQSAFSLFRDMREARV-PDLKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGT 505
A L+ +M + + PD+ +Y +++ G M + E F + D V T
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDI-FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 506 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 565
++++I FCKA R+E+ FR M+ N TY +LI+G+ A N M++
Sbjct: 401 --YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF-- 456
Query: 566 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 620
K+ +S H I + L+D + K G AM V E + D + Y
Sbjct: 457 -KQMVSVGVHPNILTYNILLD----GLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 163/407 (40%), Gaps = 75/407 (18%)
Query: 194 LPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELES--VTDAERVVGTMSNLGVRPD 251
L +F++ R+ L KP++ CN L G S ++ A V M +GV +
Sbjct: 151 LQIFQKMIRLKL-------KPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLN 203
Query: 252 ELTFGFLGYLYAVKG-LQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTI 310
TF L Y ++G L++ + LE ++ EF + V Y+ ++ K G L+ ++ +
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
Query: 311 LRSLSD---EDRKDWNFGGETFCAV--------VKEYLRKGN-----------IKGLANL 348
L + +R +N +C + + E +++ N I GL N
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323
Query: 349 INEAQKLEPSN------IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVY 402
+ + LE + ++ D +++ C +GLS +A ++++M G +
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTH 383
Query: 403 IPILKAYCKENRTAEATILVME-ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR 461
LK CKE + T V E + G D+ TY LI+ + D A + R+M
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM- 442
Query: 462 EARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRL 521
G I++ T N+I+ A CK +L
Sbjct: 443 -----------------------------------GQKGIKMNTITLNTILDALCKERKL 467
Query: 522 EDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKR 568
++A + F ++ TY +LI G+ EK L +W+++K+
Sbjct: 468 DEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 108/493 (21%), Positives = 208/493 (42%), Gaps = 36/493 (7%)
Query: 64 VSTLQTTLHKSLITSDTDEAWKSFKSLTSHQAFPPKPLT-NSLITHLSSLGDIHNLKRAF 122
V T ++ + ++A + + S P +T N+++ +S G + +LK
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
Query: 123 ASAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVE 182
M++N +V T + ++ + AF +V M K +P N+L+
Sbjct: 264 LD----MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM-KQTNVLPDLCTYNILIN 318
Query: 183 IIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGT 242
+ +G++ L + + + L +PDV N ++GC EL +A +++
Sbjct: 319 GLCNAGSMREGLELMDAMKSLKL-------QPDVVTYNTLIDGCF-ELGLSLEARKLMEQ 370
Query: 243 MSNLGVRPDELTFGF-LGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSG 301
M N GV+ +++T L +L + + +++ L+ G S V Y LI Y+K G
Sbjct: 371 MENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVG 430
Query: 302 NLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 361
+L S L + + +K T ++ ++ + NL+N A K
Sbjct: 431 DL----SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHK---RGFI 483
Query: 362 ADNSIGYGIVNACVSMGL-----SDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTA 416
D + YG + MG +KA + DEM + + + + ++ C +T
Sbjct: 484 VD-EVTYGTL----IMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTE 538
Query: 417 EATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD-MREARVPDLKGSYLTI 475
A E++ SGL D T++++I + AF + + ++ + PD + +
Sbjct: 539 LAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNI-L 597
Query: 476 MTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQ 535
+ GL + E F + ++ + EV T +N++I AFCK +L++A M
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEER--EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKG 655
Query: 536 FEPNDQTYLSLIN 548
EP+ TY S I+
Sbjct: 656 LEPDRFTYNSFIS 668
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 153/377 (40%), Gaps = 25/377 (6%)
Query: 178 NVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAE 237
N +++ + K G L+ + LD K + P+ N + G C +L S+ +A
Sbjct: 244 NTILKAMSKKGRLSDLKELL-------LDMKKNGLVPNRVTYNNLVYGYC-KLGSLKEAF 295
Query: 238 RVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGY 297
++V M V PD T+ L G + EL M V Y+ LI G
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
Query: 298 VKSGNLASMESTILRSLSDED-----RKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA 352
+ G S+E+ L + D + N + C KE R+ + + L++
Sbjct: 356 FELG--LSLEARKLMEQMENDGVKANQVTHNISLKWLC---KEEKREAVTRKVKELVDM- 409
Query: 353 QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKE 412
D + ++ A + +G A ++ EM G + IL A CKE
Sbjct: 410 -----HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Query: 413 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY 472
+ EA L+ G +D TY LI + + A ++ +M++ ++ ++
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTF 524
Query: 473 LTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMN 532
+++ GL + + EL DE + + + +NSII +CK GR+E A +
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDE-LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI 583
Query: 533 FLQFEPNDQTYLSLING 549
F+P++ T L+NG
Sbjct: 584 KHSFKPDNYTCNILLNG 600
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 192/465 (41%), Gaps = 104/465 (22%)
Query: 226 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEKINELEVL---MGE 280
C C A V+G + LG PD TF L +KGL + K++E VL M E
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTL-----IKGLFLEGKVSEAVVLVDRMVE 186
Query: 281 FGCSNKKVFYSNLISGYVKSGN-------LASME-----------STILRSLSDEDRKD- 321
GC V Y+++++G +SG+ L ME STI+ SL + D
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 322 --------------------------------WNFGGE---------------TFCAVVK 334
WN G TF ++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 335 EYLRKGNIKGLANLINE--AQKLEPSNIKADNSI--GYGIVNACVSMGLSDKAHSILDEM 390
++++G ++ L E + + P NI N++ GY C+ LS+ A+++LD M
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISP-NIITYNTLMDGY-----CMQNRLSE-ANNMLDLM 359
Query: 391 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 450
S + + ++K YC R + + IS GL + TY L++ S
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 451 QSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWN 509
+ A LF++M +PD+ +Y ++ GL +N + E A + E + ++++G +
Sbjct: 420 KLAEELFQEMVSHGVLPDVM-TYGILLDGLCDNGKLE-KALEIFEDLQKSKMDLGIVMYT 477
Query: 510 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV--SAEKHFNVLMLWNDVK 567
+II CK G++EDA F + +PN TY +I+G + N+L+
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL------ 531
Query: 568 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMK 612
RK+ DG+ +N + A ++ G A+ +++E EMK
Sbjct: 532 RKMEEDGNAPNDCTYN---TLIRAHLRDGDLTASAKLIE---EMK 570
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 145/341 (42%), Gaps = 48/341 (14%)
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 271
++P V N ++G C + + + DA + M G+RP+ +T
Sbjct: 252 LEPGVLIYNTIIDGLC-KYKHMDDALNLFKEMETKGIRPNVVT----------------- 293
Query: 272 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 331
YS+LIS G + R LSD + N TF A
Sbjct: 294 ------------------YSSLISCLCNYGRWSDAS----RLLSDMIERKINPDVFTFSA 331
Query: 332 VVKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 389
++ ++++G + L +E K ++PS + + ++N D+A + +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS-----LINGFCMHDRLDEAKQMFEF 386
Query: 390 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 449
M + + Y ++K +CK R E + E+S GL + TY+ LI+ + D
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 450 FQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWN 509
A +F++M VP +Y T++ GL +N + E A + E + ++E + +N
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE-KAMVVFEYLQRSKMEPTIYTYN 505
Query: 510 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
+I CKAG++ED F ++ +P+ Y ++I+G+
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 186/464 (40%), Gaps = 52/464 (11%)
Query: 157 AFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMK-PD 215
A AL M K+R PF II S L+A + + ++L E+++ + P
Sbjct: 65 AVALFGEMVKSR---PFP-------SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPH 114
Query: 216 VAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINE 273
+ L C C + A V+G M LG P+ +T L GY ++ ++I+E
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS-----KRISE 169
Query: 274 LEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFC 330
L+ + G V ++ LI G + + I R ++ + D T+
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL----VTYG 225
Query: 331 AVVKEYLRKGNIKGLANLIN--EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 388
VV ++G+ NL+N E KLEP + I I++ D A ++
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL-----IYNTIIDGLCKYKHMDDALNLFK 280
Query: 389 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 448
EM G + Y ++ C R ++A+ L+ ++ + DV T+ ALI+ +
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 449 DFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH-- 506
A L+ +M + + +Y +++ G + R LDE V H
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR-------LDEAKQMFEFMVSKHCF 393
Query: 507 ----DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLML 562
+N++I FCK R+E+ FR M+ N TY LI G A +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD----CDM 449
Query: 563 WNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 606
++ +++ SDG +N L + K G + AM V E
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYN---TLLDGLCKNGKLEKAMVVFE 490
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 151/382 (39%), Gaps = 52/382 (13%)
Query: 213 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEK 270
+P++ ++ L G C + +++A +V M G +P+ +TF L + GL K
Sbjct: 148 EPNIVTLSSLLNGYC-HSKRISEAVALVDQMFVTGYQPNTVTFNTL-----IHGLFLHNK 201
Query: 271 INELEVLMGEF---GCSNKKVFYSNLISGYVKSGN-------LASME-----------ST 309
+E L+ GC V Y +++G K G+ L ME +T
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 310 ILRSLSDEDRKDWNFGGETFCAVVKEYLRKG---NIKGLANLIN---------EAQKLEP 357
I+ L D + KE KG N+ ++LI+ +A +L
Sbjct: 262 IIDGLCKYKHMDDALN------LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 358 S----NIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKEN 413
I D +++A V G +A + DEM + Y ++ +C +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 414 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYL 473
R EA + + S DV TY+ LI+ + + +FR+M + + +Y
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 474 TIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNF 533
++ GL + ++ E+V D + +N+++ CK G+LE A F +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 534 LQFEPNDQTYLSLINGYVSAEK 555
+ EP TY +I G A K
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGK 516
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 132/348 (37%), Gaps = 68/348 (19%)
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 271
++P+V ++L C C +DA R++ M + PD TF L + +G K+
Sbjct: 287 IRPNVVT-YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG---KL 342
Query: 272 NELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE---DRKDWNFG 325
E E L E V YS+LI+G+ L + +S D +N
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 326 GETFCAVVK-----EYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGI-VNACVSMGL 379
+ FC + E R+ + +GL N++ Y I + G
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVG----------------NTVTYNILIQGLFQAGD 446
Query: 380 SDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDA 439
D A I EM + G + Y +L CK + +A ++ + S ++ + TY+
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 440 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 499
+IE + + + LF ++ LKG +P+++A
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNL------SLKGV------------KPDVVA---------- 538
Query: 500 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 547
+N++I FC+ G E+A F+ M PN Y +LI
Sbjct: 539 --------YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 152/357 (42%), Gaps = 55/357 (15%)
Query: 266 GLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFG 325
GL +++ ++ + M E Y+ +++GY K GN+ + + + E D +F
Sbjct: 197 GLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV--EAGLDPDFF 254
Query: 326 GETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG--IVNACVSMGLSDKA 383
T+ +++ Y ++ ++ + NE P N + Y I CV+ + D+A
Sbjct: 255 --TYTSLIMGYCQRKDLDSAFKVFNEM----PLKGCRRNEVAYTHLIHGLCVARRI-DEA 307
Query: 384 HSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIET 443
+ +M + Y ++K+ C R +EA LV E+ +G++ ++ TY LI++
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 444 SMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEV 503
S F+ A L M E GLM N
Sbjct: 368 LCSQCKFEKARELLGQMLEK--------------GLMPN--------------------- 392
Query: 504 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 563
+N++I+ +CK G +EDA M + PN +TY LI GY + H + +L
Sbjct: 393 -VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLN 451
Query: 564 NDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 620
++RK+ D + ++L+D + G FD+A +++ ++ + D+W Y
Sbjct: 452 KMLERKVLPD----VVTYNSLID----GQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 159/363 (43%), Gaps = 30/363 (8%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTF-GFLGYLYAVKGLQEKIN 272
PDV N+ ++G C + A R++ M++ G+ PD+ T+ + L K ++E +
Sbjct: 460 PDVVTYNSLIDGQC-RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 273 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 332
+ L + G + V Y+ LI GY K+G + + + LS K+ TF A+
Sbjct: 519 LFDSL-EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS----KNCLPNSLTFNAL 573
Query: 333 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 392
+ G +K A L+ E K+ ++ S +++ + G D A+S +M +
Sbjct: 574 IHGLCADGKLKE-ATLLEE--KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS 630
Query: 393 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 452
G Y ++ YC+E R +A ++ ++ +G+ D+ TY +LI+
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690
Query: 453 AFSLFRDMREARVPDLKGSYLTIMTGLME-------NHRPELMA-----------AFLDE 494
AF + + MR+ + ++L+++ L+E PEL A L++
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 495 VVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQ-FEPNDQTYLSLINGYVSA 553
+V + + + +I C+ G L A + F M + P++ + +L++
Sbjct: 751 MV-EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 554 EKH 556
+KH
Sbjct: 810 KKH 812
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 157/376 (41%), Gaps = 43/376 (11%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 273
P++ N + G C +L +V +A + V + G+ PD T+ L Y + + +
Sbjct: 216 PNIYTYNKMVNGYC-KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK 274
Query: 274 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE---DRKDWNFGGETFC 330
+ M GC +V Y++LI G + + ++ DE + + ++ C
Sbjct: 275 VFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 331 A---------VVKEYLRKG---NIKGLANLINE--------------AQKLEPSNIKADN 364
+VKE G NI LI+ Q LE + N
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP--N 392
Query: 365 SIGY-GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVM 423
I Y ++N G+ + A +++ M + S Y ++K YCK N +L
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNK 452
Query: 424 EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMEN 482
+ L DV TY++LI+ S +F SA+ L M + VPD + +Y +++ L ++
Sbjct: 453 MLERKVLP-DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD-QWTYTSMIDSLCKS 510
Query: 483 HRPELMAAFLDEVVG---DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 539
R E D + +P + + + ++I +CKAG++++A +M PN
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVM----YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 540 DQTYLSLINGYVSAEK 555
T+ +LI+G + K
Sbjct: 567 SLTFNALIHGLCADGK 582
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 139/366 (37%), Gaps = 60/366 (16%)
Query: 228 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 287
C E ++A +V M G++P+ T+ L + EK EL M E G
Sbjct: 334 CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 288 VFYSNLISGYVKSGNLAS-------MESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKG 340
+ Y+ LI+GY K G + MES R LS R T+ ++K Y K
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMES---RKLSPNTR--------TYNELIKGYC-KS 441
Query: 341 NIKGLANLINE--AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVG 398
N+ ++N+ +K+ P ++ NS+ I C S G D A+ +L MN G
Sbjct: 442 NVHKAMGVLNKMLERKVLP-DVVTYNSL---IDGQCRS-GNFDSAYRLLSLMNDRGLVPD 496
Query: 399 LGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFR 458
Y ++ + CK R EA L + G+ +V Y ALI+ + A +
Sbjct: 497 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 459 DMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG---DPRIEVGT---------- 505
M ++ ++ GL + + + +++V P + T
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 506 ---------------------HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYL 544
H + + I +C+ GRL DA +M P+ TY
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 545 SLINGY 550
SLI GY
Sbjct: 677 SLIKGY 682
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 115/269 (42%), Gaps = 16/269 (5%)
Query: 288 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 347
V YS+LIS G + LSD K N TF A++ ++++G
Sbjct: 221 VTYSSLISCLCSYGRWSDASQL----LSDMIEKKINPNLVTFNALIDAFVKEGKFV---- 272
Query: 348 LINEAQKLEPSNIK----ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYI 403
EA+KL IK D ++N DKA + + M + L Y
Sbjct: 273 ---EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 329
Query: 404 PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 463
++K +CK R + T L E+S GL D TY LI+ D +A +F+ M
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389
Query: 464 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 523
VP +Y ++ GL N + E D + I++ + + ++I CKAG+++D
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFD-YMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 524 ARRTFRRMNFLQFEPNDQTYLSLINGYVS 552
F ++ +PN TY ++I+G S
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 174/407 (42%), Gaps = 33/407 (8%)
Query: 223 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVL--- 277
L C C ++ A ++G M LG P +T L GY + ++I++ L
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG-----KRISDAVALVDQ 105
Query: 278 MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYL 337
M E G + ++ LI G + + + R + ++ T+ VV
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV----QRGCQPNLVTYGVVVNGLC 161
Query: 338 RKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSV 397
++G+I NL+N K+E + I+AD I I+++ D A ++ EM G
Sbjct: 162 KRGDIDLAFNLLN---KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 398 GLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF 457
+ Y ++ C R ++A+ L+ ++ + ++ T++ALI+ + F A L
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 458 RDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGTHDWNSIIH 513
DM + + PD+ +Y +++ G + R + + +V P ++ +N++I
Sbjct: 279 DDMIKRSIDPDI-FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT----YNTLIK 333
Query: 514 AFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSD 573
FCK+ R+ED FR M+ + TY +LI G N V +++ SD
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA----QKVFKQMVSD 389
Query: 574 GHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 620
G+ D L + G + A++V + + +I +D + Y
Sbjct: 390 ---GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 433
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 121/318 (38%), Gaps = 22/318 (6%)
Query: 178 NVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAE 237
N L++ K G + ++ + ++D PD+ N+ + G C + + A+
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSID-------PDIFTYNSLINGFCMH-DRLDKAK 310
Query: 238 RVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGY 297
++ M + PD T+ L + E EL M G V Y+ LI G
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 298 VKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEP 357
G+ + + + +SD D T+ ++ G ++ + + QK
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDI----MTYSILLDGLCNNGKLEKALEVFDYMQK--- 423
Query: 358 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 417
S IK D I ++ G D + ++ G + Y ++ C + E
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 418 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 477
A L+ ++ G D TY+ LI + D ++ L R+MR R G TI
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR---FVGDASTI-- 538
Query: 478 GLMEN--HRPELMAAFLD 493
GL+ N H L +FLD
Sbjct: 539 GLVANMLHDGRLDKSFLD 556
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 174/430 (40%), Gaps = 55/430 (12%)
Query: 121 AFASAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVL 180
A +F+ME P + T + ++ + N A+ A AL+ M +G V
Sbjct: 171 ALVDQMFVMEYQP---NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV- 226
Query: 181 VEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVV 240
V + K G++ L + ++ EK + ++ DV ++ C ++V DA +
Sbjct: 227 VNGLCKRGDIDLALSLLKKM------EKGK-IEADVVIYTTIIDALC-NYKNVNDALNLF 278
Query: 241 GTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKS 300
M N G+RP+ +T Y++LI
Sbjct: 279 TEMDNKGIRPNVVT-----------------------------------YNSLIRCLCNY 303
Query: 301 GNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNI 360
G + R LSD + N TF A++ ++++G + L +E K +I
Sbjct: 304 GRWSDAS----RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK---RSI 356
Query: 361 KADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 420
D ++N D+A + + M + + Y ++K +CK R E
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 421 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 480
L E+S GL + TY+ LI+ + D A +F+ M VP +Y ++ GL
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 481 ENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPND 540
+ + E A + E + ++E + +N +I CKAG++ED F ++ +PN
Sbjct: 477 KYGKLE-KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 541 QTYLSLINGY 550
Y ++I+G+
Sbjct: 536 IIYTTMISGF 545
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 175/405 (43%), Gaps = 29/405 (7%)
Query: 223 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLMGE 280
L C C + A V+G M LG PD +T L GY + ++I+E L+ +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG-----KRISEAVALVDQ 175
Query: 281 FGCSNKK---VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYL 337
+ V ++ LI G + + I R ++ + D T+ VV
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF----TYGTVVNGLC 231
Query: 338 RKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSV 397
++G+I +L+ +K+E I+AD I I++A + + A ++ EM+ G
Sbjct: 232 KRGDIDLALSLL---KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 398 GLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF 457
+ Y +++ C R ++A+ L+ ++ + +V T+ ALI+ + A L+
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 458 RDMREARV-PDLKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAF 515
+M + + PD+ +Y +++ G M + E F + D V T +N++I F
Sbjct: 349 DEMIKRSIDPDI-FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT--YNTLIKGF 405
Query: 516 CKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGH 575
CKA R+E+ FR M+ N TY +LI G A + + +K+ SD
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD----CDMAQKIFKKMVSD-- 459
Query: 576 KGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 620
G+ D L + K G + A+ V E + K+ D + Y
Sbjct: 460 -GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 156/381 (40%), Gaps = 50/381 (13%)
Query: 213 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEK 270
+PD+ ++ L G C + +++A +V M + +P+ +TF L + GL K
Sbjct: 147 EPDIVTLSSLLNGYC-HGKRISEAVALVDQMFVMEYQPNTVTFNTL-----IHGLFLHNK 200
Query: 271 INELEVLMGEF---GCSNKKVFYSNLISGYVKSGN-------LASME-----------ST 309
+E L+ GC Y +++G K G+ L ME +T
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 310 ILRSL-------------SDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA--QK 354
I+ +L ++ D K T+ ++++ G + L+++ +K
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 355 LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENR 414
+ P+ + +++A V G +A + DEM + Y ++ +C +R
Sbjct: 321 INPNVVTFS-----ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 415 TAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLT 474
EA + + S +V TY+ LI+ ++ + LFR+M + + +Y T
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 475 IMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFL 534
++ GL + ++ ++V D + ++ ++ CK G+LE A F +
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 535 QFEPNDQTYLSLINGYVSAEK 555
+ EP+ TY +I G A K
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGK 515
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 176/402 (43%), Gaps = 23/402 (5%)
Query: 223 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLMGE 280
L C C ++ A ++G M LG P +T L GY + K + + + ++ ++ E
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG-KRISDAVALVDQMV-E 183
Query: 281 FGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKG 340
G + ++ LI G + + + R + + + T+ VV ++G
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL----VTYGVVVNGLCKRG 239
Query: 341 NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 400
+ NL+N K+E + I+AD I I+++ D A ++ EM G +
Sbjct: 240 DTDLALNLLN---KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 401 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 460
Y ++ C R ++A+ L+ ++ + ++ T++ALI+ + F A L+ DM
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 461 REARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVG-DPRIEVGTHDWNSIIHAFCKA 518
+ + PD+ +Y +++ G + R + + +V D +V T +N++I FCK+
Sbjct: 357 IKRSIDPDIF-TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT--YNTLIKGFCKS 413
Query: 519 GRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGI 578
R+ED FR M+ + TY +LI G N V +++ SD G+
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA----QKVFKQMVSD---GV 466
Query: 579 KFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 620
D L + G + A++V + + +I +D + Y
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 115/269 (42%), Gaps = 16/269 (5%)
Query: 288 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 347
V YS+LIS G + LSD K N TF A++ ++++G
Sbjct: 296 VTYSSLISCLCSYGRWSDASQL----LSDMIEKKINPNLVTFNALIDAFVKEGKFV---- 347
Query: 348 LINEAQKLEPSNIK----ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYI 403
EA+KL IK D +VN DKA + + M + + Y
Sbjct: 348 ---EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 404 PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 463
++K +CK R + T L E+S GL D TY LI+ D +A +F+ M
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Query: 464 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 523
VP +Y ++ GL N + E D + I++ + + ++I CKAG+++D
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFD-YMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 524 ARRTFRRMNFLQFEPNDQTYLSLINGYVS 552
F ++ +PN TY ++I+G S
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCS 552
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 123/318 (38%), Gaps = 22/318 (6%)
Query: 178 NVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAE 237
N L++ K G ++++ + ++D PD+ N+ + G C + + A+
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSID-------PDIFTYNSLVNGFCMH-DRLDKAK 385
Query: 238 RVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGY 297
++ M + PD +T+ L + E EL M G V Y+ LI G
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 298 VKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEP 357
G+ + + + +SD D T+ ++ G ++ + + QK
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDI----MTYSILLDGLCNNGKLEKALEVFDYMQK--- 498
Query: 358 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 417
S IK D I ++ G D + ++ G + Y ++ C + E
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 418 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 477
A L+ ++ G + TY+ LI + D ++ L R+MR R G TI
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR---FVGDASTI-- 613
Query: 478 GLMEN--HRPELMAAFLD 493
GL+ N H L +FLD
Sbjct: 614 GLVANMLHDGRLDKSFLD 631
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 145/351 (41%), Gaps = 10/351 (2%)
Query: 200 SCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLG 259
SC + KL F +PD+ + L G C + DA + + +G +P+ +T+ L
Sbjct: 138 SCFLGKMMKLGF-EPDLVTFTSLLNGYC-HWNRIEDAIALFDQILGMGFKPNVVTYTTLI 195
Query: 260 YLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDR 319
EL MG G V Y+ L++G + G + +LR + R
Sbjct: 196 RCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD-AAWLLRDMMKR-R 253
Query: 320 KDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGL 379
+ N TF A++ +++ G + L N ++ ++ D ++N GL
Sbjct: 254 IEPNV--ITFTALIDAFVKVGKLMEAKELYNVMIQM---SVYPDVFTYGSLINGLCMYGL 308
Query: 380 SDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDA 439
D+A + M G +Y ++ +CK R + + E+S G+ + TY
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 440 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 499
LI+ A +F M R P +Y ++ GL N + E A + E +
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE-KALMIFEYMRKR 427
Query: 500 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
+++ + II CK G++EDA F + +PN TY ++I+G+
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 370 IVNACVSMGLSD-KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS 428
IV CV + +A L +M LG L + +L YC NR +A L +I
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 429 GLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPEL 487
G + +V TY LI ++ A LF M P++ +Y ++TGL E R
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV-TYNALVTGLCEIGRWGD 241
Query: 488 MAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 547
A L +++ RIE + ++I AF K G+L +A+ + M + P+ TY SLI
Sbjct: 242 AAWLLRDMM-KRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 548 NG 549
NG
Sbjct: 301 NG 302
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 133/320 (41%), Gaps = 32/320 (10%)
Query: 159 ALVRCMFKNRYFVPFAMWGNVLVEIIRKSG------NLAAFLPVFEESCRVAL------- 205
L+RC+ KNR+ N VE+ + G N+ + + C +
Sbjct: 193 TLIRCLCKNRHL-------NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 206 --DEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYA 263
D ++P+V A ++ ++ + +A+ + M + V PD T+G L
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFV-KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 264 VKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWN 323
+ GL ++ ++ LM GC +V Y+ LI G+ KS + ++ + +K
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG----MKIFYEMSQKGVV 360
Query: 324 FGGETFCAVVKEYLRKGNIKGLANLINE-AQKLEPSNIKADNSIGYGIVNACVSMGLSDK 382
T+ +++ Y G + N+ + + P +I+ N + G+ C + G +K
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL---CCN-GKVEK 416
Query: 383 AHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 442
A I + M + + Y I++ CK + +A L + S G++ +V TY +I
Sbjct: 417 ALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMIS 476
Query: 443 TSMSSQDFQSAFSLFRDMRE 462
A SLF+ M+E
Sbjct: 477 GFCRRGLIHEADSLFKKMKE 496
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 173/417 (41%), Gaps = 58/417 (13%)
Query: 137 ESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPV 196
+S T + ++ + N A+ A ALV M +G ++V + K G++ L
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG-IVVNGLCKRGDIDLAL-- 241
Query: 197 FEESCRVALDEKLEFMK--PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELT 254
+L +K+E K P V N ++ C ++V DA + M N G+RP+ +T
Sbjct: 242 -------SLLKKMEQGKIEPGVVIYNTIIDALC-NYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 255 FGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSL 314
Y++LI G + R L
Sbjct: 294 -----------------------------------YNSLIRCLCNYGRWSDAS----RLL 314
Query: 315 SDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNAC 374
SD + N TF A++ ++++G + L +E K +I D ++N
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK---RSIDPDIFTYSSLINGF 371
Query: 375 VSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDV 434
D+A + + M + + Y ++K +CK R E L E+S GL +
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 435 ETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLD 493
TY LI +++ +A +F+ M + +PD+ +Y ++ GL N + E A +
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM-TYSILLDGLCNNGKVE-TALVVF 489
Query: 494 EVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
E + ++E + +N +I CKAG++ED F ++ +PN TY ++++G+
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 173/415 (41%), Gaps = 65/415 (15%)
Query: 213 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEK 270
+PD+ N+ L G C ++DA +VG M +G +PD TF L + GL +
Sbjct: 148 EPDIVTLNSLLNGFC-HGNRISDAVSLVGQMVEMGYQPDSFTFNTL-----IHGLFRHNR 201
Query: 271 INELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 327
+E L+ GC V Y +++G K G++ + ++L+ +
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI-DLALSLLKKM------------- 247
Query: 328 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 387
E K+EP + I I++A + + A ++
Sbjct: 248 -----------------------EQGKIEPGVV-----IYNTIIDALCNYKNVNDALNLF 279
Query: 388 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 447
EM+ G + Y +++ C R ++A+ L+ ++ + +V T+ ALI+ +
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 448 QDFQSAFSLFRDMREARV-PDLKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGT 505
A L+ +M + + PD+ +Y +++ G M + E F + D V T
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIF-TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 506 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 565
+N++I FCKA R+++ FR M+ N TY +LI+G+ A + N +++
Sbjct: 399 --YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF-- 454
Query: 566 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 620
+++ SD G+ D L + G + A+ V E K+ D + Y
Sbjct: 455 --KQMVSD---GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 17/243 (6%)
Query: 368 YG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEIS 426
YG I+N MG ++ A ++L +M + +Y I+ CK+ A L E+
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 427 SSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRP 485
G+ DV TY +I++ S + A L RDM E ++ PD + + L+
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPD-----VVTFSALINALVK 158
Query: 486 ELMAAFLDEVVGD---PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 542
E + +E+ GD I T +NS+I FCK RL DA+R M P+ T
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVT 218
Query: 543 YLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAM 602
+ +LINGY A++ N + ++ ++ R +GI + ++ + G DAA
Sbjct: 219 FSTLINGYCKAKRVDNGMEIFCEMHR-------RGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 603 QVV 605
++
Sbjct: 272 DLL 274
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 167/417 (40%), Gaps = 91/417 (21%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 273
PDV ACN+ L + + DA +V M + G D + L VKG+ NE
Sbjct: 168 PDVIACNSLL-SLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCIL-----VKGM---CNE 218
Query: 274 LEVLMGEF--------GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFG 325
+V +G GC VFY+ +I GY K G++ + + + L K +
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIEN-AYLVFKELK---LKGFMPT 274
Query: 326 GETFCAVVKEYLRKGNI------------KGLA------NLINEAQKLEPSNIKADNSIG 367
ETF ++ + ++G+ +GL N I +A+ + SIG
Sbjct: 275 LETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIG 334
Query: 368 YGIVNAC--------------VSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKEN 413
+ I N C G + A LDE + G Y P+++AYCK
Sbjct: 335 WIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSK 394
Query: 414 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYL 473
A+ L+++++ G + D+ TY LI + S A ++ + + V Y
Sbjct: 395 EYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYN 454
Query: 474 TIMTGLMENHR-----------------PE--LMAAFLDEVV--GD-------------- 498
+M+GL + R P+ + A +D + GD
Sbjct: 455 MLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEK 514
Query: 499 -PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAE 554
+++V H N++I FC++G L++A RMN P+ TY ++I+GYV +
Sbjct: 515 GVKVDVVHH--NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 128/341 (37%), Gaps = 56/341 (16%)
Query: 213 KPDVAACNAALEGCCCELESVTDAERVVGTM---SNLGVRPDELTFGFLGYLYAVKGLQE 269
KPDVA N + C E E VG + S G+ P+ L++ L Y +
Sbjct: 342 KPDVATYNILINRLCKE----GKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397
Query: 270 KINELEVLMGEFGCSNKKVFYSNLISGYVKSGNL---ASMESTILRSLSDEDRKDWNFGG 326
++L + M E GC V Y LI G V SG++ +M+ ++ D +N
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457
Query: 327 ETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSI 386
C + G L +E + NI D + +++ + G D+A +
Sbjct: 458 SGLC-------KTGRFLPAKLLFSE---MLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Query: 387 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 446
G V + + ++K +C+ EA + ++ L D TY +I+ +
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Query: 447 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 506
QD +A +FR M + + +P ++
Sbjct: 568 QQDMATAIKIFRYMEKNKC------------------KPNVVT----------------- 592
Query: 507 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 547
+ S+I+ FC G + A TF+ M PN TY +LI
Sbjct: 593 -YTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 175/414 (42%), Gaps = 43/414 (10%)
Query: 184 IRKSG---NLAAFLPVFEESCRVAL--------DEKLEF-MKPDVAACNAALEGCCCELE 231
+R+SG +F P+ E C+ L DE L + P + N + C+
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYI-CALCDFG 357
Query: 232 SVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN---KKV 288
+ DA ++ +M+ PD +++ L + Y G K E +L + + V
Sbjct: 358 RIDDARELLSSMAA----PDVVSYNTLMHGYIKMG---KFVEASLLFDDLRAGDIHPSIV 410
Query: 289 FYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE-TFCAVVKEYLRKGNIKGLAN 347
Y+ LI G +SGNL + L +E F T+ +VK +++ GN+
Sbjct: 411 TYNTLIDGLCESGNLEGAQR-----LKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATE 465
Query: 348 LINEAQKLEPSNIKADNSIGYGIVNACVS---MGLSDKAHSILDEMNALGGSV-GLGVYI 403
+ +E + IK D GY V +G SDKA + +EM A L +Y
Sbjct: 466 VYDEMLR---KGIKPD---GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYN 519
Query: 404 PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 463
+ CK +A +I GL D TY +I + + F+ A +L+ +M
Sbjct: 520 VRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK 579
Query: 464 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG-DPRIEVGTHDWNSIIHAFCKAGRLE 522
R+ +Y ++ G + R E + E+ R V TH N++++ CKAG ++
Sbjct: 580 RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTH--NALLYGMCKAGNID 637
Query: 523 DARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND-VKRKLSSDGH 575
+A R +M PN +Y LI+ EK V+ L+ + + +++ DG+
Sbjct: 638 EAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGY 691
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 152/353 (43%), Gaps = 32/353 (9%)
Query: 208 KLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL 267
KL F +P + + L G C + +A +V +M G P+ + Y + GL
Sbjct: 142 KLGF-RPSIVTLGSLLNGFC-QGNRFQEAVSLVDSMDGFGFVPNVVI-----YNTVINGL 194
Query: 268 ---QEKINELEVLMGEFGCSNKK------VFYSNLISGYVKSGNLASMESTILRSLSDED 318
++ N LEV F C KK V Y+ LISG SG R L D
Sbjct: 195 CKNRDLNNALEV----FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA----RLLRDMV 246
Query: 319 RKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA-QKLEPSNIKADNSIGYGIVNACVSM 377
++ + F A++ ++++GN+ NL E ++ N+ NS+ G C+
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF---CIHG 303
Query: 378 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 437
L D A + D M + G + Y ++ +CK R + L E++ GL D TY
Sbjct: 304 CLGD-AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 438 DALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVV 496
+ LI + A +F M + V PD+ +Y ++ L N + E A + E +
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV-TYNILLDCLCNNGKIE-KALVMVEDL 420
Query: 497 GDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 549
++V +N II C+ +L++A FR + +P+ Y+++I+G
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 140/351 (39%), Gaps = 59/351 (16%)
Query: 226 CCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLMGEFGC 283
C C ++ A ++G M LG RP +T G L G+ + QE ++ ++ + G FG
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR-FQEAVSLVDSMDG-FGF 180
Query: 284 SNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIK 343
V Y+ +I+G K+ +D N E F
Sbjct: 181 VPNVVIYNTVINGLCKN-------------------RDLNNALEVFYC------------ 209
Query: 344 GLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYI 403
+E I+AD +++ + G A +L +M + +
Sbjct: 210 -----------MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 404 PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-RE 462
++ + KE EA L E+ + +V TY++LI A +F M +
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 463 ARVPDLKGSYLTIMTGLMENHRPELMAAFLDE-----VVGDPRIEVGTHDWNSIIHAFCK 517
PD+ +Y T++TG ++ R E E +VGD +N++IH +C+
Sbjct: 319 GCFPDVV-TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD------AFTYNTLIHGYCQ 371
Query: 518 AGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKR 568
AG+L A++ F RM P+ TY L++ + K L++ D+++
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 10/227 (4%)
Query: 382 KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALI 441
+A S++D M+ G + +Y ++ CK A + + G++ D TY+ LI
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 442 ETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR 500
+S + A L RDM + ++ P++ I T + E + E + + +
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 501 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVL 560
V T +NS+I+ FC G L DA+ F M P+ TY +LI G+ +++ + +
Sbjct: 287 PNVFT--YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 561 MLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEK 607
L+ + ++ G G F +N ++ + G + A +V +
Sbjct: 345 KLFCE----MTYQGLVGDAFTYN---TLIHGYCQAGKLNVAQKVFNR 384
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 153/397 (38%), Gaps = 31/397 (7%)
Query: 64 VSTLQTTLHKSLITSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFA 123
+ TL + L+ + EA S+ P + N++I L D++N F
Sbjct: 149 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF- 207
Query: 124 SAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEI 183
+ ME+ + ++ T + ++ + + A L+R M K R P ++ L++
Sbjct: 208 ---YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK-RKIDPNVIFFTALIDT 263
Query: 184 IRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTM 243
K GNL +++E R ++ P+V N+ + G C + DA+ + M
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSV-------VPNVFTYNSLINGFCIH-GCLGDAKYMFDLM 315
Query: 244 SNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNL 303
+ G PD +T+ L + E +L M G Y+ LI GY ++G L
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 304 ASMESTILRSLS---DEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPS-N 359
+ R + D +N + C G I+ ++ + QK E +
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLC-------NNGKIEKALVMVEDLQKSEMDVD 428
Query: 360 IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 419
I N I G+ C + L + A + + G YI ++ C++ EA
Sbjct: 429 IITYNIIIQGL---CRTDKLKE-AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 420 ILVMEISSSGLQLDVETYDALIE---TSMSSQDFQSA 453
L + G YD + TS+S++ ++A
Sbjct: 485 KLCRRMKEDGFMPSERIYDETLRDHYTSLSAELIKAA 521
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 138/349 (39%), Gaps = 60/349 (17%)
Query: 213 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG--LQEK 270
+PD+ ++ L G C + ++DA +V M +G +PD TF L + G L K
Sbjct: 150 EPDIVTLSSLLNGYC-HSKRISDAVALVDQMVEMGYKPDTFTFTTL-----IHGLFLHNK 203
Query: 271 INELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 327
+E L+ + GC V Y +++G K
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK---------------------------- 235
Query: 328 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 387
+G+I NL+N K+E + IKA+ I I+++ + A +
Sbjct: 236 -----------RGDIDLALNLLN---KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 388 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 447
EM G + Y ++ C R ++A+ L+ + + +V T++ALI+
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 448 QDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD--PRIEVG 504
A L +M + + PD L I M N E F V D P I+
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT- 400
Query: 505 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 553
+N++I+ FCK R+ED FR M+ N TY ++I G+ A
Sbjct: 401 ---YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 16/238 (6%)
Query: 366 IGYG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVME 424
+ YG +VN G D A ++L++M A + ++ I+ + CK A L E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 425 ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENH 483
+ + G++ +V TY++LI + + A L +M E ++ P++ I E
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 484 RPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 543
E A L E + I+ T +N +I+ FC RL++A++ F+ M PN QTY
Sbjct: 344 LVE--AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 544 LSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAA 601
+LING+ ++ + + L+ R++S G G + Y + GFF A
Sbjct: 402 NTLINGFCKCKRVEDGVELF----REMSQRGLVG--------NTVTYTTIIQGFFQAG 447
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 128/291 (43%), Gaps = 23/291 (7%)
Query: 288 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 347
V Y++LI+ G + R LS+ K N TF A++ + ++G +
Sbjct: 294 VTYNSLINCLCNYGRWSDAS----RLLSNMLEKKINPNVVTFNALIDAFFKEGKLV---- 345
Query: 348 LINEAQKLEPSNIKAD---NSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYI 403
EA+KL I+ ++I Y + +N D+A + M + + Y
Sbjct: 346 ---EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYN 402
Query: 404 PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 463
++ +CK R + L E+S GL + TY +I+ + D SA +F+ M
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Query: 464 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 523
RVP +Y ++ GL + + A + + + +E+ +N++I CKAG++ +
Sbjct: 463 RVPTDIMTYSILLHGLCSYGKLD-TALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 524 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG 574
A F L +P+ TY ++I+G S +L +D+ RK+ DG
Sbjct: 522 AWDLFCS---LSIKPDVVTYNTMISGLCSKR----LLQEADDLFRKMKEDG 565
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 103/518 (19%), Positives = 202/518 (38%), Gaps = 43/518 (8%)
Query: 80 TDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESE 139
D AWK F + ++ P + S+I L + F +E+N V +
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH----LEKNRRVPCTY 309
Query: 140 TIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEE 199
+ M+ A A++L+ + + +P + N ++ +RK G + L VFEE
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQ-RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE 368
Query: 200 S------------------CRVA-LDEKLEF--------MKPDVAACNAALEGCCCELES 232
CR LD E + P+V N ++ C+ +
Sbjct: 369 MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDR-LCKSQK 427
Query: 233 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 292
+ +A + M PDE+TF L G + ++ M + C + Y++
Sbjct: 428 LDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTS 487
Query: 293 LISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF-CAVVKEYLRKGNIKGLANLINE 351
LI + G ++ D C KG + + I +
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKG--RAMFEEI-K 544
Query: 352 AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 411
A++ P + ++ + + +G++ A G +++ + + M G + Y ++ +CK
Sbjct: 545 ARRFVP-DARSYSILIHGLIKA----GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 412 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGS 471
+ +A L+ E+ + G + V TY ++I+ A+ LF + + R+
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 472 YLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRM 531
Y +++ G + R + L+E++ + + WNS++ A KA + +A F+ M
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELM-QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 532 NFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 569
L+ PN TY LING K + W +++++
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 174/469 (37%), Gaps = 85/469 (18%)
Query: 64 VSTLQTTLHKSLITSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFA 123
V T+ + + + DEA F+ + P + SLI L +G + + + +
Sbjct: 412 VRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYE 471
Query: 124 SAVFLMERNPMVLESETI------------HAMLDSMKGANTAAPAFALVR----CMFKN 167
+ R ++ + I H + M N +P L+ CMFK
Sbjct: 472 KMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN-CSPDLQLLNTYMDCMFKA 530
Query: 168 ---------------RYFVPFAMWGNVLVEIIRKSG----NLAAFLPVFEESCRVALDEK 208
R FVP A ++L+ + K+G F + E+ C +
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL----- 585
Query: 209 LEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQ 268
D A N ++G C + V A +++ M G P +T+G + + GL
Sbjct: 586 ------DTRAYNIVIDGFC-KCGKVNKAYQLLEEMKTKGFEPTVVTYGSV-----IDGLA 633
Query: 269 EKINELEVLMGEFGCSNKK------VFYSNLISGYVKSGNLAS----MESTILRSLSDED 318
KI+ L+ F + K V YS+LI G+ K G + +E + + L+ +
Sbjct: 634 -KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT-PN 691
Query: 319 RKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA----QKLEPSNIKADNSIGYGI-VNA 373
WN A+VK A INEA Q ++ N + YGI +N
Sbjct: 692 LYTWN---SLLDALVK-----------AEEINEALVCFQSMKELKCTP-NQVTYGILING 736
Query: 374 CVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLD 433
+ +KA EM G Y ++ K AEA L ++G D
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Query: 434 VETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMEN 482
Y+A+IE + AFSLF + R +P + + ++ L +N
Sbjct: 797 SACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKN 845
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 121/280 (43%), Gaps = 14/280 (5%)
Query: 329 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 388
F +++ + ++G + +L++E ++ S++ AD + +++ +G D A
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDE---MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 389 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 448
E+ A G Y ++ CK NR EA + + + Y+ +I S+
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 449 DFQSAFSLFRDMR-EARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 507
F A+SL R + +P + +Y I+T L + + + +E+ D + T
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVI-AYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLST-- 379
Query: 508 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 567
+N +I C+AG+L+ A M PN +T +++ ++K ++ ++
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 568 RKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEK 607
K+ + I F +L+D + K G D A +V EK
Sbjct: 440 YKVCTPDE--ITF-CSLID----GLGKVGRVDDAYKVYEK 472
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 156/362 (43%), Gaps = 19/362 (5%)
Query: 213 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTF-GFLGYLYAVKGLQEKI 271
+PD + + G C V+DA +V M +G +PD + + + L K + +
Sbjct: 152 EPDRVTIGSLVNGFC-RRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 272 N---ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET 328
+ E+E G V Y+ L++G S S S R LSD +K T
Sbjct: 211 DFFKEIE----RKGIRPNVVTYTALVNGLCNS----SRWSDAARLLSDMIKKKITPNVIT 262
Query: 329 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 388
+ A++ +++ G + L E ++ +I D ++N D+A+ + D
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRM---SIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 389 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 448
M + G + Y ++ +CK R + L E+S GL + TY+ LI+ +
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 449 DFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD 507
D A F M + PD+ +Y ++ GL +N E A + E + +++
Sbjct: 380 DVDKAQEFFSQMDFFGISPDI-WTYNILLGGLCDNGELE-KALVIFEDMQKREMDLDIVT 437
Query: 508 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 567
+ ++I CK G++E+A F ++ +P+ TY ++++G + V L+ +K
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Query: 568 RK 569
++
Sbjct: 498 QE 499
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 155/385 (40%), Gaps = 52/385 (13%)
Query: 190 LAAFLPVFEESCRVALDEKLEFM--KPDVAACNAALEGCCCELESVTDAERVVGTMSNLG 247
L+A + + + ++L +K+E + + D+ N + CC + V+ A ++G M LG
Sbjct: 92 LSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQ-VSLALSILGKMLKLG 150
Query: 248 VRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASME 307
PD +T G L + + L M E G V Y+ +I K+ +
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV---- 206
Query: 308 STILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNS 365
+ + +RK T+ A+V A L+++ +K+ P N
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP------NV 260
Query: 366 IGY-GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVME 424
I Y +++A V G +A + +EM + + Y ++ C +R EA +
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 425 ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHR 484
+ S G DV +Y+ LI ++ + LFR+M + GL+ N
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ--------------RGLVSN-- 364
Query: 485 PELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYL 544
T +N++I F +AG ++ A+ F +M+F P+ TY
Sbjct: 365 --------------------TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 545 SLINGYVSAEKHFNVLMLWNDVKRK 569
L+ G + L+++ D++++
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKR 429
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 179/422 (42%), Gaps = 26/422 (6%)
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 271
+K V + +EG C E V +++++ S G++P+ T+ + Y + +
Sbjct: 220 VKITVYSLTIVVEGLCRRGE-VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 272 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDR-KDWNFGGETFC 330
+ +M + G KV Y+ L+ VK+G ++ E L DE R + +
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEK-----LFDEMRERGIESDVHVYT 333
Query: 331 AVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSIL 387
+++ RKGN+K L +E + L PS S YG +++ +G A ++
Sbjct: 334 SLISWNCRKGNMKRAFLLFDELTEKGLSPS------SYTYGALIDGVCKVGEMGAAEILM 387
Query: 388 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 447
+EM + G ++ V+ ++ YC++ EA+++ + G Q DV T + +
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL 447
Query: 448 QDFQSAFSLFRDMREARVPDLKGSYLTIM-TGLMENHRPELMAAFLDEVVGDPRIEVGTH 506
+ + A M E V SY ++ E + E F++ + ++
Sbjct: 448 KRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVE--MSSKGVQPNAI 505
Query: 507 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 566
+N +I+A+CK G++++AR+ M +P+ TY SLI+G A+ NV ++
Sbjct: 506 TYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD---NV----DEA 558
Query: 567 KRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFME 626
R S G KG+ + + + K G D A + ++ +D Y
Sbjct: 559 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Query: 627 TH 628
H
Sbjct: 619 MH 620
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 159/368 (43%), Gaps = 19/368 (5%)
Query: 212 MKPDVAACNAALEGCCCELESVTDA----ERVVGTMSNLG--VRPDELTFGFLGYLYAVK 265
++PDV L C+ V +A E++ G ++ G ++ D + F L
Sbjct: 325 IRPDVVTL-GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 266 GLQEKINELEVLMG-EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNF 324
G ++ EL V M E C V Y+ LI GY ++G L + + + R DE + +
Sbjct: 384 GRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV-- 441
Query: 325 GGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAH 384
T +V R GL + +E +K + +++AC S+ +KA
Sbjct: 442 --VTVNTIVGGMCRH---HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 385 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 444
++M G S +Y ++ C+ R +A +V ++ G LD+ Y+ LI
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 445 MSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEV 503
+ + + + DM +E + PD +Y T+++ ++ E + ++++ D ++
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPD-SITYNTLISFFGKHKDFESVERMMEQMREDG-LDP 614
Query: 504 GTHDWNSIIHAFCKAGRLEDARRTFRRMNF-LQFEPNDQTYLSLINGYVSAEKHFNVLML 562
+ ++I A+C G L++A + F+ M + PN Y LIN + L L
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Query: 563 WNDVKRKL 570
++K K+
Sbjct: 675 KEEMKMKM 682
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 159/368 (43%), Gaps = 19/368 (5%)
Query: 212 MKPDVAACNAALEGCCCELESVTDA----ERVVGTMSNLG--VRPDELTFGFLGYLYAVK 265
++PDV L C+ V +A E++ G ++ G ++ D + F L
Sbjct: 325 IRPDVVTL-GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 266 GLQEKINELEVLMG-EFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNF 324
G ++ EL V M E C V Y+ LI GY ++G L + + + R DE + +
Sbjct: 384 GRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV-- 441
Query: 325 GGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAH 384
T +V R GL + +E +K + +++AC S+ +KA
Sbjct: 442 --VTVNTIVGGMCRH---HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 385 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 444
++M G S +Y ++ C+ R +A +V ++ G LD+ Y+ LI
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 445 MSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEV 503
+ + + + DM +E + PD +Y T+++ ++ E + ++++ D ++
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPD-SITYNTLISFFGKHKDFESVERMMEQMREDG-LDP 614
Query: 504 GTHDWNSIIHAFCKAGRLEDARRTFRRMNF-LQFEPNDQTYLSLINGYVSAEKHFNVLML 562
+ ++I A+C G L++A + F+ M + PN Y LIN + L L
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Query: 563 WNDVKRKL 570
++K K+
Sbjct: 675 KEEMKMKM 682
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 151/387 (39%), Gaps = 27/387 (6%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 273
P CN L L + +A M + ++ + TF + + +G +K
Sbjct: 188 PKTETCNHILT-LLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKG 246
Query: 274 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 333
+M FG V Y+ L+ G+ G + I S+ K + +T+ ++
Sbjct: 247 FLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLII----SEMKSKGFQPDMQTYNPIL 302
Query: 334 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGI-VNACVSMGLSDKAHSILDEMNA 392
+G + + E L P +S+ Y I + C + G + A + DEM
Sbjct: 303 SWMCNEGRASEVLREMKEI-GLVP------DSVSYNILIRGCSNNGDLEMAFAYRDEMVK 355
Query: 393 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 452
G Y ++ EN+ A IL+ EI G+ LD TY+ LI D +
Sbjct: 356 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKK 415
Query: 453 AFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG---DPRIEVGTHDWN 509
AF+L +M + + +Y +++ L ++ ++VVG P + + N
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM----MN 471
Query: 510 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 569
+++ C G ++ A + M+ + P+D TY L+ G K L ++KR
Sbjct: 472 TLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR- 530
Query: 570 LSSDGHKGIKFDHNLVDAFLYAMVKGG 596
+GIK DH + + K G
Sbjct: 531 ------RGIKPDHISYNTLISGYSKKG 551
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 179/454 (39%), Gaps = 66/454 (14%)
Query: 81 DEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESET 140
DEA + F + +P N ++T LS L I N F + ++ ME V T
Sbjct: 172 DEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIEN-AWVFYADMYRMEIKSNVY---T 227
Query: 141 IHAMLDSM--KGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFE 198
+ M++ + +G A F + +F + P + N LV+ G +
Sbjct: 228 FNIMINVLCKEGKLKKAKGFLGIMEVFGIK---PTIVTYNTLVQGFSLRGRI-------- 276
Query: 199 ESCRVALDE-KLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG- 256
E R+ + E K + +PD+ N L C E A V+ M +G+ PD +++
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNE----GRASEVLREMKEIGLVPDSVSYNI 332
Query: 257 -----------------------------FLGYLYAVKGL--QEKINELEVLMGEF---G 282
F Y + GL + KI E+L+ E G
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 283 CSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE-TFCAVVKEYLRKGN 341
V Y+ LI+GY + G+ +L DE D + T+ +++ RK
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKA-----FALHDEMMTDGIQPTQFTYTSLIYVLCRKNK 447
Query: 342 IKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGV 401
+ L +K+ +K D + +++ ++G D+A S+L EM+ + +
Sbjct: 448 TREADELF---EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVT 504
Query: 402 YIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR 461
Y +++ C E + EA L+ E+ G++ D +Y+ LI D + AF + +M
Sbjct: 505 YNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEML 564
Query: 462 EARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV 495
+Y ++ GL +N EL L E+
Sbjct: 565 SLGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 146/362 (40%), Gaps = 20/362 (5%)
Query: 215 DVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINEL 274
D+ CN L C C+ A +G M LG PD +TF L + + E+ +
Sbjct: 106 DLYTCNL-LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSM 164
Query: 275 EVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE----TFC 330
M E G V Y+ +I K+G++ +LS D+ + N+G +
Sbjct: 165 VNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY-------ALSLFDQME-NYGIRPDVVMYT 216
Query: 331 AVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 390
++V G + +L+ K IK D +++A V G A + +EM
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTK---RKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 391 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 450
+ + + Y ++ +C E EA + + + G DV Y +LI +
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 451 QSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 510
A +F +M + + +Y T++ G + +P + +V + +N
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG-VPPNIRTYNV 392
Query: 511 IIHAFCKAGRLEDARRTFRRMNFLQFE---PNDQTYLSLINGYVSAEKHFNVLMLWNDVK 567
++H C G+++ A F M + + PN TY L++G K LM++ D++
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Query: 568 RK 569
++
Sbjct: 453 KR 454
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 84/405 (20%), Positives = 152/405 (37%), Gaps = 52/405 (12%)
Query: 208 KLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL 267
KL F +PD+ + + G C + +A +V M +G++PD + + + G
Sbjct: 135 KLGF-EPDIVTFTSLINGFCLG-NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 268 QEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE 327
L M +G V Y++L++G SG +S +LR ++ K
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS-LLRGMTKRKIKPDVI--- 248
Query: 328 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACVSMGLSDKAHSI 386
TF A++ ++++G L NE ++ A N Y ++N G D+A +
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSI----APNIFTYTSLINGFCMEGCVDEARQM 304
Query: 387 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 446
M G + Y ++ +CK + +A + E+S GL + TY LI+
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 447 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 506
A +F M VP +Y ++ L N + + +++ V +
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 507 DW--NSIIHAFC-----------------------------------KAGRLEDARRTFR 529
W N ++H C KAG++++A F
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 530 RMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG 574
+ +PN TY ++I+G +L+ RK+ DG
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF----RKMKEDG 525
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 171/404 (42%), Gaps = 27/404 (6%)
Query: 223 LEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVL--- 277
L C C ++ A ++G M LG PD +T L G+ + +I++ L
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG-----NRISDAVALVDQ 173
Query: 278 MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYL 337
M E G V ++ LI G + + I R + + D T+ AVV
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDL----VTYGAVVNGLC 229
Query: 338 RKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSV 397
++G+ NL+N K+E + I+A+ I ++++ D A ++ EM G
Sbjct: 230 KRGDTDLALNLLN---KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 398 GLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF 457
+ Y ++ C R ++A+ L+ ++ + ++ T+ ALI+ + A L+
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 458 RDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV-GDPRIEVGTHDWNSIIHAFC 516
+M + + +Y +++ G R L+ ++ D V T +N++I+ FC
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT--YNTLINGFC 404
Query: 517 KAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHK 576
KA R++ FR M+ N TY +LI+G+ A N M++ K+ +S H
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF---KQMVSVGVHP 461
Query: 577 GIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 620
I + L+D + K G AM V E + D + Y
Sbjct: 462 NILTYNILLD----GLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 152/385 (39%), Gaps = 58/385 (15%)
Query: 213 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEK 270
+PD+ N+ L G C ++DA +V M +G +PD +TF L + GL K
Sbjct: 145 EPDIVTLNSLLNGFC-HGNRISDAVALVDQMVEMGYKPDTVTFTTL-----IHGLFLHNK 198
Query: 271 INELEVL---MGEFGCSNKKVFYSNLISGYVKSGN-------LASME-----------ST 309
+E L M + GC V Y +++G K G+ L ME ST
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 310 ILRSLSDEDRKD--WNFGGE-----------TFCAVVKEYLRKGNIKGLANLINEA--QK 354
++ SL +D N E T+ +++ G + L+++ +K
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 355 LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENR 414
+ P+ + +++A V G KA + +EM + Y ++ +C +R
Sbjct: 319 INPNLVTFS-----ALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDR 373
Query: 415 TAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLT 474
EA ++ + +V TY+ LI ++ LFR+M + + +Y T
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 433
Query: 475 IMTGLMENHRPELMAAFLDEVVGDPRIEVGTH----DWNSIIHAFCKAGRLEDARRTFRR 530
++ G + + ++V VG H +N ++ CK G+L A F
Sbjct: 434 LIHGFFQARDCDNAQMVFKQMV-----SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 488
Query: 531 MNFLQFEPNDQTYLSLINGYVSAEK 555
+ EP+ TY +I G A K
Sbjct: 489 LQRSTMEPDIYTYNIMIEGMCKAGK 513
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 137/332 (41%), Gaps = 45/332 (13%)
Query: 216 VAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELE 275
+ +CN L+G ++ + A R++ + + G P+ +TF L + +G ++ +L
Sbjct: 252 IVSCNKVLKGL--SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLF 309
Query: 276 VLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 335
+M + G + YS LI GY K+G L G + F +
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLG-------------------MGHKLF----SQ 346
Query: 336 YLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGG 395
L KG +K D + ++ V G A + M G
Sbjct: 347 ALHKG-------------------VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 396 SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFS 455
S + Y ++K C++ R EA + +I G++ + TY +LI+ + +S F+
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 456 LFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAF 515
L+ DM + P Y ++ GL + F +++G I + +NS+I +
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS-IRLNVVVFNSLIDGW 506
Query: 516 CKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 547
C+ R ++A + FR M +P+ T+ +++
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 201/488 (41%), Gaps = 41/488 (8%)
Query: 63 QVSTLQTTLHKSLITSDTDEAWKSFKSLTSHQAFPPKPLTNS-LITHLSSLGDIHNLKRA 121
V +T+ + + D A +K + Q P +T + LI L G I+ A
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLC-QGISPNVVTYTILIKGLCQDGRIYE---A 410
Query: 122 FASAVFLMERN--PMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNV 179
F +++R P ++ T +++D FAL M K Y ++G V
Sbjct: 411 FGMYGQILKRGMEPSIV---TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG-V 466
Query: 180 LVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERV 239
LV+ + K G + + R ++ + ++ +V N+ ++G C L +A +V
Sbjct: 467 LVDGLSKQG-------LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC-RLNRFDEALKV 518
Query: 240 VGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVK 299
M G++PD TF + + ++G E+ L M + G + Y LI + K
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Query: 300 SGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGN-IKGLANLINE--AQKLE 356
M+ TI L D +++ C VV L K + I+ + N K+E
Sbjct: 579 H-----MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 357 PSNIKADNSI-GYGIVNACVSMGLSDKAHSILD--EMNALG-GSVGLGVYIPILKAYCKE 412
P + + I GY S+ D+A I + ++ G +V L + I +L CK
Sbjct: 634 PDIVTYNTMICGY------CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL---CKN 684
Query: 413 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY 472
N A + ++ G + + TY L++ S D + +F LF +M+E + SY
Sbjct: 685 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 744
Query: 473 LTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMN 532
I+ GL + R + + + D ++ + +I +CK GRL +A + M
Sbjct: 745 SIIIDGLCKRGRVDEATNIFHQAI-DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHML 803
Query: 533 FLQFEPND 540
+P+D
Sbjct: 804 RNGVKPDD 811
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 126/307 (41%), Gaps = 18/307 (5%)
Query: 247 GVRPDELTFGFLGYLYAVKGLQE--KINELEVLMGEF---GCSNKKVFYSNLISGYVKSG 301
G+ P+ +T+ L +KGL + +I E + G+ G V YS+LI G+ K G
Sbjct: 386 GISPNVVTYTIL-----IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 302 NLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 361
NL S + + D G + K+ L ++ ++ ++ +L N+
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL---NVV 497
Query: 362 ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATIL 421
NS+ ++ + D+A + M G + + +++ E R EA L
Sbjct: 498 VFNSL----IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFL 553
Query: 422 VMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLME 481
+ GL+ D Y LI+ LF M+ ++ ++ L +
Sbjct: 554 FFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 482 NHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQ 541
HR E + F + ++ + ++E +N++I +C RL++A R F + F PN
Sbjct: 614 CHRIEDASKFFNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 672
Query: 542 TYLSLIN 548
T LI+
Sbjct: 673 TLTILIH 679
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 126/312 (40%), Gaps = 51/312 (16%)
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 271
+ PDV A + G C ++ + +A ++ M G+ PD +TF L Y G +
Sbjct: 382 ITPDVLTYTAIISGFC-QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 272 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE---- 327
+ M + GCS V Y+ LI G K G+L S + + W G +
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL--------HEMWKIGLQPNIF 492
Query: 328 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 387
T+ ++V + GNI+ L+ E E + + AD +++A G DKA IL
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGE---FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 388 DEM------------NAL-----------------------GGSVGLGVYIPILKAYCKE 412
EM N L G + + ++K YC
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 413 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY 472
N AT + ++ S G+ D +TY+ L++ +++ + A+ LF++M+ +Y
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 473 LTIMTGLMENHR 484
++ G ++ +
Sbjct: 670 SVLIKGFLKRKK 681
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/425 (19%), Positives = 168/425 (39%), Gaps = 47/425 (11%)
Query: 178 NVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAE 237
N+++ + + G + +E+ + L +L+ PDV + + + G C +
Sbjct: 250 NIVIHFVCQLGRI-------KEAHHLLLLMELKGYTPDVISYSTVVNGYC-RFGELDKVW 301
Query: 238 RVVGTMSNLGVRPDELTFG-FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISG 296
+++ M G++P+ +G +G L + L E ++ + G V Y+ LI G
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDG 360
Query: 297 YVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE--AQK 354
+ K G++ + S + D T+ A++ + + G++ L +E +
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDV----LTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 355 LEPSNIK-----------------------------ADNSIGYG-IVNACVSMGLSDKAH 384
LEP ++ + N + Y +++ G D A+
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 385 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 444
+L EM +G + Y I+ CK EA LV E ++GL D TY L++
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 445 MSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVG 504
S + A + ++M + ++ +M G + E L+ ++ I
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPN 595
Query: 505 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWN 564
+NS++ +C L+ A ++ M P+ +TY +L+ G+ A L+
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 565 DVKRK 569
++K K
Sbjct: 656 EMKGK 660
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 163/422 (38%), Gaps = 34/422 (8%)
Query: 82 EAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETI 141
EA ++F + P + +LI GDI RA + + M + + T
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI----RAASKFFYEMHSRDITPDVLTY 389
Query: 142 HAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEESC 201
A++ A L MF + P ++ L+ K+G++ V
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMF-CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 202 RVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYL 261
+ P+V ++G C E + + A ++ M +G++P+ T+ +
Sbjct: 449 QAGCS-------PNVVTYTTLIDGLCKEGD-LDSANELLHEMWKIGLQPNIFTYNSI--- 497
Query: 262 YAVKGLQE--KINELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSD 316
V GL + I E L+GEF G + V Y+ L+ Y KSG + + + L
Sbjct: 498 --VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG- 554
Query: 317 EDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGIVNAC 374
K TF ++ + G ++ L+N A+ + P N NS+ + C
Sbjct: 555 ---KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP-NATTFNSL---VKQYC 607
Query: 375 VSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDV 434
+ L A +I +M + G Y ++K +CK EA L E+ G + V
Sbjct: 608 IRNNLK-AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 435 ETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDE 494
TY LI+ + + F A +F MR + K + + RP+ + +DE
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDE 726
Query: 495 VV 496
++
Sbjct: 727 II 728
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 133/340 (39%), Gaps = 12/340 (3%)
Query: 216 VAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELE 275
V +CN L + A V +GV + ++ + + G ++ + L
Sbjct: 210 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 276 VLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 335
+LM G + + YS +++GY + G L + + + RK + +++
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGEL----DKVWKLIEVMKRKGLKPNSYIYGSIIGL 325
Query: 336 YLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGG 395
R I LA ++ I D + +++ G A EM++
Sbjct: 326 LCR---ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 396 SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFS 455
+ + Y I+ +C+ EA L E+ GL+ D T+ LI + + AF
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 456 LFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV--VGDPRIEVGTHDWNSIIH 513
+ M +A +Y T++ GL + + L E+ +G ++ +NSI++
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG---LQPNIFTYNSIVN 499
Query: 514 AFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 553
CK+G +E+A + + TY +L++ Y +
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 126/312 (40%), Gaps = 51/312 (16%)
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 271
+ PDV A + G C ++ + +A ++ M G+ PD +TF L Y G +
Sbjct: 382 ITPDVLTYTAIISGFC-QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 272 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE---- 327
+ M + GCS V Y+ LI G K G+L S + + W G +
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL--------HEMWKIGLQPNIF 492
Query: 328 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 387
T+ ++V + GNI+ L+ E E + + AD +++A G DKA IL
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGE---FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 388 DEM------------NAL-----------------------GGSVGLGVYIPILKAYCKE 412
EM N L G + + ++K YC
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 413 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY 472
N AT + ++ S G+ D +TY+ L++ +++ + A+ LF++M+ +Y
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 473 LTIMTGLMENHR 484
++ G ++ +
Sbjct: 670 SVLIKGFLKRKK 681
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/425 (19%), Positives = 168/425 (39%), Gaps = 47/425 (11%)
Query: 178 NVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAE 237
N+++ + + G + +E+ + L +L+ PDV + + + G C +
Sbjct: 250 NIVIHFVCQLGRI-------KEAHHLLLLMELKGYTPDVISYSTVVNGYC-RFGELDKVW 301
Query: 238 RVVGTMSNLGVRPDELTFG-FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISG 296
+++ M G++P+ +G +G L + L E ++ + G V Y+ LI G
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDG 360
Query: 297 YVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE--AQK 354
+ K G++ + S + D T+ A++ + + G++ L +E +
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDV----LTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 355 LEPSNIK-----------------------------ADNSIGYG-IVNACVSMGLSDKAH 384
LEP ++ + N + Y +++ G D A+
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 385 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 444
+L EM +G + Y I+ CK EA LV E ++GL D TY L++
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 445 MSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVG 504
S + A + ++M + ++ +M G + E L+ ++ I
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPN 595
Query: 505 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWN 564
+NS++ +C L+ A ++ M P+ +TY +L+ G+ A L+
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 565 DVKRK 569
++K K
Sbjct: 656 EMKGK 660
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 163/422 (38%), Gaps = 34/422 (8%)
Query: 82 EAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETI 141
EA ++F + P + +LI GDI RA + + M + + T
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI----RAASKFFYEMHSRDITPDVLTY 389
Query: 142 HAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEESC 201
A++ A L MF + P ++ L+ K+G++ V
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMF-CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 202 RVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYL 261
+ P+V ++G C E + + A ++ M +G++P+ T+ +
Sbjct: 449 QAGCS-------PNVVTYTTLIDGLCKEGD-LDSANELLHEMWKIGLQPNIFTYNSI--- 497
Query: 262 YAVKGLQE--KINELEVLMGEF---GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSD 316
V GL + I E L+GEF G + V Y+ L+ Y KSG + + + L
Sbjct: 498 --VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG- 554
Query: 317 EDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE--AQKLEPSNIKADNSIGYGIVNAC 374
K TF ++ + G ++ L+N A+ + P N NS+ + C
Sbjct: 555 ---KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP-NATTFNSL---VKQYC 607
Query: 375 VSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDV 434
+ L A +I +M + G Y ++K +CK EA L E+ G + V
Sbjct: 608 IRNNLK-AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 435 ETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDE 494
TY LI+ + + F A +F MR + K + + RP+ + +DE
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDE 726
Query: 495 VV 496
++
Sbjct: 727 II 728
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 133/340 (39%), Gaps = 12/340 (3%)
Query: 216 VAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELE 275
V +CN L + A V +GV + ++ + + G ++ + L
Sbjct: 210 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 276 VLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 335
+LM G + + YS +++GY + G L + + + RK + +++
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGEL----DKVWKLIEVMKRKGLKPNSYIYGSIIGL 325
Query: 336 YLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGG 395
R I LA ++ I D + +++ G A EM++
Sbjct: 326 LCR---ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 396 SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFS 455
+ + Y I+ +C+ EA L E+ GL+ D T+ LI + + AF
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 456 LFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV--VGDPRIEVGTHDWNSIIH 513
+ M +A +Y T++ GL + + L E+ +G ++ +NSI++
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG---LQPNIFTYNSIVN 499
Query: 514 AFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 553
CK+G +E+A + + TY +L++ Y +
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 132/337 (39%), Gaps = 65/337 (19%)
Query: 290 YSNLISGYVKSGNLASMESTILRSLSDE----DRKDWN--FGGETFCAVVKEYLRKGNI- 342
YS+LI G +GN+ ES + L + D +N GG C +KE L I
Sbjct: 293 YSSLIHGLCDAGNVDKAES-VFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 343 ---------------KGLA--NLINEAQ---KLEPSNIKADNSIGYGIV--NACVSMGLS 380
KGL I+EA +L P+ A + YGI CV+ G
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN-GYV 410
Query: 381 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 440
+KA ++ E+ + GG + + Y I+ CK+ R EA+ LV E+S G++L+ +AL
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470
Query: 441 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV---- 496
I + A R+M + SY ++ GL + + +AF+ E++
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530
Query: 497 ---------------GDPRIEVGTHDW---------------NSIIHAFCKAGRLEDARR 526
D +I++ W N +IH C G+L+DA
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 527 TFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 563
M N TY +L+ G+ ++W
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 91/193 (47%), Gaps = 4/193 (2%)
Query: 381 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 440
+KA LD M G + Y ++ K + +A L E+S G+ DV Y+ L
Sbjct: 166 EKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNIL 225
Query: 441 IETSMSSQDFQSAFSLFRDMRE--ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD 498
I+ + +D ++A L+ + E + P++K ++ +++GL + R + + + +
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVK-THNIMISGLSKCGRVDDCLKIWERMKQN 284
Query: 499 PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFN 558
R E + ++S+IH C AG ++ A F ++ + + TY +++ G+ K
Sbjct: 285 ER-EKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKE 343
Query: 559 VLMLWNDVKRKLS 571
L LW ++ K S
Sbjct: 344 SLELWRIMEHKNS 356
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 14/229 (6%)
Query: 370 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
++NA V K S+ G + L Y ++K CK+ +A + + G
Sbjct: 120 LLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEG 179
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELM 488
+ DV +Y +I + A LF +M E V PD+ Y ++ G ++ +
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVT-CYNILIDGFLKEKDHKTA 238
Query: 489 AAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 548
D ++ D + N +I K GR++D + + RM + E + TY SLI+
Sbjct: 239 MELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIH 298
Query: 549 GYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGF 597
G A ++N++ + +S +D Y + GGF
Sbjct: 299 GLCDAGNVDKAESVFNELDERKAS------------IDVVTYNTMLGGF 335
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 136/318 (42%), Gaps = 27/318 (8%)
Query: 245 NLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLA 304
N+ V P+ TF L + K E+ E+ M E G V Y+ + + YV+ G
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETV 240
Query: 305 SMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLE-PSNIKAD 363
ES ++ + +++ N G T VV Y R+G ++ + +++ +N+
Sbjct: 241 RAESEVVEKMVMKEKAKPN--GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 364 NSIGYGIVNACVSMGLSDKAHSIL----DEMNALGGSVGLGVYIPILKAYCKENRTAEAT 419
NS+ G V G+ + ++L +E L G+ + V + L C
Sbjct: 299 NSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKEC--------- 349
Query: 420 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 479
++ DV TY ++ S+ + A +F++M +A V +Y + G
Sbjct: 350 ---------NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 400
Query: 480 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 539
+ P+ L+ ++ + R V + ++I +C G ++DA R F +M PN
Sbjct: 401 VRAKEPKKAEELLETLIVESRPNVVI--FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 458
Query: 540 DQTYLSLINGYVSAEKHF 557
+T+ +L+ GY+ ++ +
Sbjct: 459 IKTFETLMWGYLEVKQPW 476
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Query: 370 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
++N + G +A ++ + G L Y +L A + + + +V E+ SG
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 489
+LD ++A+I S + + A M+E + +Y T++ G +PE +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 490 AFLDEVVGDPRIEVGTH--DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 547
LD ++ + ++VG + +N ++ A+CK ++E+A ++M P+ TY ++
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 548 NGYV 551
YV
Sbjct: 231 TCYV 234
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 112/249 (44%), Gaps = 14/249 (5%)
Query: 309 TILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY 368
T+ ++L++ + T A + + G+I + + ++E S K D+
Sbjct: 66 TVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS------EVEQSGTKLDSIFFN 119
Query: 369 GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC---KENRTAEATILVMEI 425
++NA G + A L +M LG + Y ++K Y K R++E L++E
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 426 SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM---EN 482
+ + ++ T++ L++ + + A+ + + M E V +Y TI T + E
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 483 HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 542
R E + ++++V + + ++ +C+ GR+ D R RRM ++ E N
Sbjct: 240 VRAE--SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV 297
Query: 543 YLSLINGYV 551
+ SLING+V
Sbjct: 298 FNSLINGFV 306
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 139/340 (40%), Gaps = 59/340 (17%)
Query: 239 VVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYV 298
+V + G + D + F + ++ G E + + M E G + Y+ LI GY
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYG 161
Query: 299 KSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPS 358
+G S +L + +E D TF +V+ + +K ++ ++ +K+E
Sbjct: 162 IAGK-PERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVV---KKMEEC 217
Query: 359 NIKADNSIGYGIVNAC-VSMGLSDKAHSILDEMNAL-------GGSVGLGVYIPILKAYC 410
++ D ++ Y + C V G + +A S + E + G + G+ ++ YC
Sbjct: 218 GVRPD-TVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGI-----VVGGYC 271
Query: 411 KENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 470
+E R + V + ++ ++ +++LI + D RD
Sbjct: 272 REGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMD--------RD----------- 312
Query: 471 SYLTIMTGLMENHRPELMAAFLDEV--VGDPRIEV-------------GTHDWNSIIHAF 515
G+ E L+ +F +EV VG+ +++V ++++++A+
Sbjct: 313 -------GIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAW 365
Query: 516 CKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 555
AG +E A + F+ M +P+ Y L GYV A++
Sbjct: 366 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 405
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 167/391 (42%), Gaps = 26/391 (6%)
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTM--SNLGVRPDELTFGFLGYLYAVKGLQE 269
++PD N + C +L + A + +M RPD +TF + +LY+VKG E
Sbjct: 279 VRPDTTTFNIIIY-CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 337
Query: 270 KINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 329
+ M G V Y+ L+ Y G M T L L D + ++
Sbjct: 338 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG----MSGTALSVLGDIKQNGIIPDVVSY 393
Query: 330 CAVVKEYLRK---GNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACVSMGLSDKAHS 385
++ Y R G K + L+ ++ +P N + Y +++A S G +A
Sbjct: 394 TCLLNSYGRSRQPGKAKEVF-LMMRKERRKP------NVVTYNALIDAYGSNGFLAEAVE 446
Query: 386 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 445
I +M G + +L A + + ++ S G+ L+ Y++ I + +
Sbjct: 447 IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYI 506
Query: 446 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 505
++ + + A +L++ MR+ +V ++ +++G + ++L E+ D I +
Sbjct: 507 NAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM-EDLSIPLTK 565
Query: 506 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 565
++S++ A+ K G++ +A F +M EP+ Y S+++ Y ++EK L+ +
Sbjct: 566 EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLE 625
Query: 566 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGG 596
++ GI+ D A + A KGG
Sbjct: 626 ME-------ANGIEPDSIACSALMRAFNKGG 649
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 157/419 (37%), Gaps = 78/419 (18%)
Query: 199 ESCRVALDEKL-EFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGF 257
E+CR + + E +KP++ + NA + S T A V+G + G+ PD +++
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT-ALSVLGDIKQNGIIPDVVSYTC 395
Query: 258 LGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLA-------SMES-- 308
L Y K E+ ++M + V Y+ LI Y +G LA ME
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 309 ---------TILRSLSDEDRK-------------DWNFGGETFCAVVKEYLRKGNIKGLA 346
T+L + S +K N + + + Y+ N L
Sbjct: 456 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYI---NAAELE 512
Query: 347 NLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPIL 406
I Q + +KAD+ +++ M +A S L EM L + VY +L
Sbjct: 513 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 572
Query: 407 KAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM------ 460
AY K+ + EA + ++ +G + DV Y +++ +S+ + A LF +M
Sbjct: 573 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 632
Query: 461 -----------------------------REARVPDLKGSYLTIMTG---LMENHRPELM 488
RE +P + I + L E R +
Sbjct: 633 PDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDL 692
Query: 489 AAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 547
+D + P + +G N ++H F K+G++E + F ++ N +TY L+
Sbjct: 693 IQMMDPYL--PSLSIGLT--NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 747
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 19/241 (7%)
Query: 370 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
+V+AC G +KA +L EM G + Y ++ YCK++ EA + + SG
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG 268
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 489
+ ++ TY++ I + A LFR++++ + +Y T++ G + + A
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTAN-HVTYTTLIDGYCRMNDID-EA 326
Query: 490 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 549
L EV+ G +NSI+ C+ GR+ +A R M+ + EP++ T +LIN
Sbjct: 327 LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Query: 550 YVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN-LVDAF------------LYAMVKGG 596
Y E + + VK+K+ G K + + L+ F L++M++ G
Sbjct: 387 YCKIEDMVSAV----KVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG 442
Query: 597 F 597
F
Sbjct: 443 F 443
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 160/395 (40%), Gaps = 65/395 (16%)
Query: 186 KSGNLAAFLPVFEE--SCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAE-RVVGT 242
K+G + + VFE+ SC +KP + AC L + +TD ++
Sbjct: 145 KAGMINDSIVVFEQIRSCG---------LKPHLQACTVLLNSLV--KQRLTDTVWKIFKK 193
Query: 243 MSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGN 302
M LGV + + L + + G EK +L M E G Y+ LIS Y K
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCK--- 250
Query: 303 LASMESTILRSLSDEDRKDWNFGGE---TFCAVVKEYLRKGNIKGLANLINEAQKLEPSN 359
+S +LS +DR + + T+ + + + R+G ++ L E + +
Sbjct: 251 ----KSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK----DD 302
Query: 360 IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 419
+ A++ +++ M D+A + + M + G S G+ Y IL+ C++ R EA
Sbjct: 303 VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREAN 362
Query: 420 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 479
L+ E+S ++ D T + LI +D SA + + M E +GL
Sbjct: 363 RLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIE--------------SGL 408
Query: 480 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 539
++ + + ++IH FCK LE+A+ M F P
Sbjct: 409 ----------------------KLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPG 446
Query: 540 DQTYLSLINGYVSAEKHFNVLMLWNDV-KRKLSSD 573
TY L++G+ + K + L + KR L +D
Sbjct: 447 YATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCAD 481
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 163/391 (41%), Gaps = 26/391 (6%)
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTM--SNLGVRPDELTFGFLGYLYAVKGLQE 269
++PD N + C +L + A + +M RPD +TF + +LY+VKG E
Sbjct: 147 VRPDTTTFNIIIY-CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 205
Query: 270 KINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF 329
+ M G V Y+ L+ Y G M T L L D + ++
Sbjct: 206 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG----MSGTALSVLGDIKQNGIIPDVVSY 261
Query: 330 CAVVKEYLRK---GNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACVSMGLSDKAHS 385
++ Y R G K + L+ ++ +P N + Y +++A S G +A
Sbjct: 262 TCLLNSYGRSRQPGKAKEVF-LMMRKERRKP------NVVTYNALIDAYGSNGFLAEAVE 314
Query: 386 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 445
I +M G + +L A + + ++ S G+ L+ Y++ I + +
Sbjct: 315 IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYI 374
Query: 446 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 505
++ + + A +L++ MR+ +V ++ +++G + ++L E+ D I +
Sbjct: 375 NAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM-EDLSIPLTK 433
Query: 506 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 565
++S++ A+ K G++ +A F +M EP+ Y S+++ Y ++EK W
Sbjct: 434 EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEK-------WGK 486
Query: 566 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGG 596
GI+ D A + A KGG
Sbjct: 487 ACELFLEMEANGIEPDSIACSALMRAFNKGG 517
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 157/419 (37%), Gaps = 78/419 (18%)
Query: 199 ESCRVALDEKL-EFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGF 257
E+CR + + E +KP++ + NA + S T A V+G + G+ PD +++
Sbjct: 205 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT-ALSVLGDIKQNGIIPDVVSYTC 263
Query: 258 LGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLA-------SMES-- 308
L Y K E+ ++M + V Y+ LI Y +G LA ME
Sbjct: 264 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Query: 309 ---------TILRSLSDEDRK-------------DWNFGGETFCAVVKEYLRKGNIKGLA 346
T+L + S +K N + + + Y+ N L
Sbjct: 324 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYI---NAAELE 380
Query: 347 NLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPIL 406
I Q + +KAD+ +++ M +A S L EM L + VY +L
Sbjct: 381 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 440
Query: 407 KAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM------ 460
AY K+ + EA + ++ +G + DV Y +++ +S+ + A LF +M
Sbjct: 441 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 500
Query: 461 -----------------------------REARVPDLKGSYLTIMTG---LMENHRPELM 488
RE +P + I + L E R +
Sbjct: 501 PDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDL 560
Query: 489 AAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 547
+D + P + +G N ++H F K+G++E + F ++ N +TY L+
Sbjct: 561 IQMMDPYL--PSLSIGLT--NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 615
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 167/385 (43%), Gaps = 32/385 (8%)
Query: 181 VEIIRKSGNLAAFLPVFEESCR-----VALDEKLEFMK----PDVAACNAALEGCCCELE 231
+E++ S +L +F + + CR +AL + MK P + + + G C +
Sbjct: 105 LEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFC-HVN 163
Query: 232 SVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEK--INE-LEVL--MGEFGCSNK 286
+A +V + LG P+ + + + + L EK +N L+VL M + G
Sbjct: 164 RFYEAMSLVDQIVGLGYEPNVVIYNTI-----IDSLCEKGQVNTALDVLKHMKKMGIRPD 218
Query: 287 KVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLA 346
V Y++LI+ SG R LSD R + TF A++ Y ++G +
Sbjct: 219 VVTYNSLITRLFHSGTWGVSA----RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAK 274
Query: 347 NLINEA-QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 405
NE Q+ NI NS+ +N GL D+A +L+ + + G Y +
Sbjct: 275 KQYNEMIQRSVNPNIVTYNSL----INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTL 330
Query: 406 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 465
+ YCK R + ++ +S G+ D TY+ L + + F +A + M V
Sbjct: 331 INGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGV 390
Query: 466 -PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 524
PD+ ++ ++ GL ++ + L+++ + VG +N II CKA ++EDA
Sbjct: 391 HPDMY-TFNILLDGLCDHGKIGKALVRLEDLQKSKTV-VGIITYNIIIKGLCKADKVEDA 448
Query: 525 RRTFRRMNFLQFEPNDQTYLSLING 549
F + P+ TY++++ G
Sbjct: 449 WYLFCSLALKGVSPDVITYITMMIG 473
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 120/275 (43%), Gaps = 12/275 (4%)
Query: 382 KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALI 441
+A S++D++ LG + +Y I+ + C++ + A ++ + G++ DV TY++LI
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 442 ETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR 500
S + + + DM R PD+ I E E + + +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 501 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVL 560
+ T +NS+I+ C G L++A++ + F PN TY +LINGY A++ + +
Sbjct: 287 PNIVT--YNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGM 344
Query: 561 MLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 620
+ + R DG G F +N + G F AA +V+ + + D + +
Sbjct: 345 KILCVMSR----DGVDGDTFTYN---TLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTF 397
Query: 621 KQAF--METHKKLKVAKLRKRNTKKMEAVIAFKNW 653
+ H K+ A +R + +K + V+ +
Sbjct: 398 NILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITY 432
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 158/371 (42%), Gaps = 41/371 (11%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY-LYAVKGLQEKIN 272
P + N+ L G C +++A +V M +G +PD +TF L + L+ E +
Sbjct: 143 PSIVTLNSLLNGFC-HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 273 ELEVLMGEFGCSNKKVFYSNLISGYVKSGN-------LASME-----------STILRSL 314
+E ++ + GC V Y +I+G K G L ME +TI+ L
Sbjct: 202 LVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 315 SDEDRKDWNF---------GGE----TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 361
D F G + T+ ++ G + L+++ + NI
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD---MLEKNIN 317
Query: 362 ADNSIGYGIVNACVSMGLSDKAHSILDEM-NALGGSVGLGVYIPILKAYCKENRTAEATI 420
D +++A V G +A + DEM + + Y ++K +CK R E
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 421 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGL 479
+ E+S GL + TY LI ++D +A +F+ M V PD+ +Y ++ GL
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM-TYNILLDGL 436
Query: 480 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 539
N E A + E + +++ + ++I A CKAG++ED F ++ +PN
Sbjct: 437 CNNGNVE-TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 540 DQTYLSLINGY 550
TY ++++G+
Sbjct: 496 VVTYTTMMSGF 506
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 162/399 (40%), Gaps = 61/399 (15%)
Query: 228 CELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVL---MGEFG 282
C ++ A ++G M LG P +T L G+ + +I+E L M E G
Sbjct: 121 CRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG-----NRISEAVALVDQMVEMG 175
Query: 283 CSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNI 342
V ++ L+ G + + + + R + + D T+ AV+ ++G
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL----VTYGAVINGLCKRGEP 231
Query: 343 KGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVY 402
NL+N K+E I+AD I I++ D A + ++M G + Y
Sbjct: 232 DLALNLLN---KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 403 IPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE 462
P++ C R ++A+ L+ ++ + D+ ++ALI+ + A L+ +M +
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 463 ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLE 522
++ + P+++A +N++I FCK R+E
Sbjct: 349 SK-----------------HCFPDVVA------------------YNTLIKGFCKYKRVE 373
Query: 523 DARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG-HKGIKFD 581
+ FR M+ N TY +LI+G+ A N M++ +++ SDG H I
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF----KQMVSDGVHPDIMTY 429
Query: 582 HNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 620
+ L+D + G + A+ V E + + +D Y
Sbjct: 430 NILLD----GLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 131/338 (38%), Gaps = 20/338 (5%)
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 271
++ DV N ++G C + + + DA + M G++PD T+ L G
Sbjct: 246 IEADVVIYNTIIDGLC-KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 272 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET--F 329
+ L M E + VF++ LI +VK G L E L DE K + + +
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK-----LYDEMVKSKHCFPDVVAY 359
Query: 330 CAVVKEYLRKGNIK-GLANLINEAQKLEPSNIKADNSIGYGIVNA--CVSMGLSDKAHSI 386
++K + + ++ G+ +Q+ N ++ +G A C D A +
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC------DNAQMV 413
Query: 387 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 446
+M + G + Y +L C A ++ + ++LD+ TY +IE
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 447 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD-PRIEVGT 505
+ + + LF + V +Y T+M+G E A E+ D P GT
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 506 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 543
+N++I A + G + + M F + T+
Sbjct: 534 --YNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 11/215 (5%)
Query: 378 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 437
G +D+A +L +M + G + Y ++ +C++ A I+ I GL+ + TY
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 438 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 497
LI+ + D Q+A + M + + Y TI+ GL + + L ++
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 498 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHF 557
+ R+ V +NSII F K G ++ A + M PN TY SL+NG +
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 558 NVLMLWNDVKRKLSSDGHKGIKFD----HNLVDAF 588
L + +++K +KG+K D L+D F
Sbjct: 637 QALEMRDEMK-------NKGVKLDIPAYGALIDGF 664
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 167/381 (43%), Gaps = 29/381 (7%)
Query: 198 EESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG- 256
EE+ ++ DE E +V CN L C + ++ +A ++ M + G+ P+ +++
Sbjct: 426 EEALKL-FDESFETGLANVFVCNTILSWLCKQGKT-DEATELLSKMESRGIGPNVVSYNN 483
Query: 257 -FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLS 315
LG+ +I +L E G YS LI G ++ + E L ++
Sbjct: 484 VMLGHCRQKNMDLARIVFSNIL--EKGLKPNNYTYSILIDGCFRNHD----EQNALEVVN 537
Query: 316 DEDRKDWNFGGETFCAVVKEYLRKGNIKG----LANLINEAQKLEPSNIKADNSIGYGIV 371
+ G + ++ + G LAN+I E ++L S + ++ I+
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE-KRLCVSCMSYNS-----II 591
Query: 372 NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQ 431
+ G D A + +EM G S + Y ++ CK NR +A + E+ + G++
Sbjct: 592 DGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
Query: 432 LDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAF 491
LD+ Y ALI+ + +SA +LF ++ E + + Y ++++G M A
Sbjct: 652 LDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN---MVAA 708
Query: 492 LD---EVVGDP-RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 547
LD +++ D R ++GT + ++I K G L A + M + P++ Y ++
Sbjct: 709 LDLYKKMLKDGLRCDLGT--YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Query: 548 NGYVSAEKHFNVLMLWNDVKR 568
NG + V+ ++ ++K+
Sbjct: 767 NGLSKKGQFVKVVKMFEEMKK 787
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 121/300 (40%), Gaps = 15/300 (5%)
Query: 142 HAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEESC 201
+++ + + A L+ M + + M N +++ K G + + + +EE C
Sbjct: 552 QTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC 611
Query: 202 RVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYL 261
+ P+V + + G C + + A + M N GV+ D +G L
Sbjct: 612 GNGI-------SPNVITYTSLMNGLC-KNNRMDQALEMRDEMKNKGVKLDIPAYGALIDG 663
Query: 262 YAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKD 321
+ + E + L + E G + + Y++LISG+ GN+ + + L D R D
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD 723
Query: 322 WNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSD 381
T+ ++ L+ GN+ + L E Q + + D I IVN G
Sbjct: 724 LG----TYTTLIDGLLKDGNLILASELYTEMQAV---GLVPDEIIYTVIVNGLSKKGQFV 776
Query: 382 KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALI 441
K + +EM + + +Y ++ + +E EA L E+ G+ D T+D L+
Sbjct: 777 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 156/376 (41%), Gaps = 20/376 (5%)
Query: 178 NVLVEIIR---KSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVT 234
++LV IIR K N++ +FE+ K ++P + N + G E + +
Sbjct: 750 SILVPIIRYSCKHNNVSGARTLFEKF------TKDLGVQPKLPTYNLLIGGLL-EADMIE 802
Query: 235 DAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLI 294
A+ V + + G PD T+ FL Y G +++ EL M C + ++ +I
Sbjct: 803 IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862
Query: 295 SGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQK 354
SG VK+GN+ +SD +D++ T+ ++ + G + L +
Sbjct: 863 SGLVKAGNVDDALDLYYDLMSD---RDFSPTACTYGPLIDGLSKSGRLYEAKQLF---EG 916
Query: 355 LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENR 414
+ + + +I ++N G +D A ++ M G L Y ++ C R
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 415 TAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR--VPDLKGSY 472
E E+ SGL DV Y+ +I S + A LF +M+ +R PDL +Y
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY-TY 1035
Query: 473 LTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMN 532
+++ L E +E + +E +N++I + +G+ E A ++ M
Sbjct: 1036 NSLILNLGIAGMVEEAGKIYNE-IQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
Query: 533 FLQFEPNDQTYLSLIN 548
F PN TY L N
Sbjct: 1095 TGGFSPNTGTYEQLPN 1110
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 3/188 (1%)
Query: 381 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 440
D +L EM LG + + ++ + + EA ++ + G DV TY L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 441 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR 500
I+ +++ A +F M+ R + +Y+T++ +N + + F E+ D
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 501 I-EVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNV 559
+ +V T + ++ A CKAG +A T M PN TY +LI G + + +
Sbjct: 360 VPDVVT--FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417
Query: 560 LMLWNDVK 567
L L+ +++
Sbjct: 418 LELFGNME 425
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 92/481 (19%), Positives = 191/481 (39%), Gaps = 36/481 (7%)
Query: 82 EAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETI 141
EA + F L P N ++ S +G+I + + M N + +
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE----MMENGCEPDVIVV 541
Query: 142 HAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEESC 201
+++++++ A+ A+ + M K P + N L+ + K+G + + +FE
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRM-KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 600
Query: 202 RVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYL 261
+ P+ N + C C+ + VT A +++ M ++G PD T+ + +
Sbjct: 601 QKGC-------PPNTITFNTLFD-CLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFG 652
Query: 262 YAVKGLQEKINELEVLMGEFGCSNKKVFYSN------LISGYVKSGNLASMESTILRSLS 315
G ++ E + KK+ Y + L+ G VK+ + I L
Sbjct: 653 LVKNG---QVKEAMCFFHQM----KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLY 705
Query: 316 DEDRKDWN-FGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKAD-NSIGYGIVNA 373
+ + N F + +++ E G+ N ++ +++L + I D +SI I+
Sbjct: 706 NCADQPANLFWEDLIGSILAE-------AGIDNAVSFSERLVANGICRDGDSILVPIIRY 758
Query: 374 CVSMGLSDKAHSILDEMNA-LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQL 432
A ++ ++ LG L Y ++ + + A + +++ S+G
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 433 DVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFL 492
DV TY+ L++ S F L+++M ++ +++GL++ +
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 493 DEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVS 552
+++ D + +I K+GRL +A++ F M PN Y LING+
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 553 A 553
A
Sbjct: 939 A 939
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 161/389 (41%), Gaps = 45/389 (11%)
Query: 222 ALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL-GYLYAVKGLQEKINELEVLMGE 280
AL C ++ +V M + +RPD +T G L L + + E + E + G+
Sbjct: 299 ALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGK 358
Query: 281 FG-----CSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 335
+ ++ LI G K G L E ++R + E+R N T+ ++
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVR-MKLEERCAPN--AVTYNCLIDG 415
Query: 336 YLRKGNIKGLANLINEAQ--KLEPSNIKADNSIG-------------------------- 367
Y R G ++ +++ + +++P+ + + +G
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 368 ----YGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVM 423
+++AC S+ +KA ++M G S +Y ++ C+ R +A +V
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 424 EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMEN 482
++ G LD+ Y+ LI + + + + DM +E + PD +Y T+++ ++
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPD-SITYNTLISFFGKH 594
Query: 483 HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNF-LQFEPNDQ 541
E + ++++ D ++ + ++I A+C G L++A + F+ M + PN
Sbjct: 595 KDFESVERMMEQMREDG-LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV 653
Query: 542 TYLSLINGYVSAEKHFNVLMLWNDVKRKL 570
Y LIN + L L ++K K+
Sbjct: 654 IYNILINAFSKLGNFGQALSLKEEMKMKM 682
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 139/350 (39%), Gaps = 39/350 (11%)
Query: 233 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 292
+ DA V+ M+ G P+ + + L + G K E++ LM G S Y+
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 293 LISGYVKSG-------------------NLASMESTI------------LRSLSDEDRKD 321
LI GY K+G N S S I LR + + ++
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 322 WNFGGETFCAVVKEYLRKG-NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLS 380
+ GG ++ + G + K L K + + N++ +G+ A G
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA----GKL 521
Query: 381 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 440
D+A I E+ G + Y ++ C + + EA + + E+ GL+ D TY L
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 441 IETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 499
I + + A + D R +PD+ +Y ++ G + R E F DE++
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVY-TYSVMIDGCCKAERTEEGQEFFDEMM-SK 639
Query: 500 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 549
++ T +N +I A+C++GRL A M PN TY SLI G
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 159/384 (41%), Gaps = 54/384 (14%)
Query: 197 FEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG 256
F++ C A D + + PDV A+ C + V +A ++ M GV P+ +TF
Sbjct: 242 FQKCCE-AFDVVCKGVSPDVYLFTTAINAFC-KGGKVEEAVKLFSKMEEAGVAPNVVTFN 299
Query: 257 FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSD 316
+ + G ++ + M E G + YS L+ G ++ +
Sbjct: 300 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG------------ 347
Query: 317 EDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVS 376
D F V+KE +KG P N+ N++ +++ +
Sbjct: 348 ----DAYF-------VLKEMTKKGF---------------PPNVIVYNNL----IDSFIE 377
Query: 377 MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVET 436
G +KA I D M + G S+ Y ++K YCK + A L+ E+ S G ++ +
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 437 YDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRP----ELMAAFL 492
+ ++I S F SA +M + G T+++GL ++ + EL FL
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 493 DEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVS 552
++ V T N+++H C+AG+L++A R + + + +Y +LI+G
Sbjct: 498 NK-----GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 553 AEKHFNVLMLWND-VKRKLSSDGH 575
+K M ++ VKR L D +
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNY 576
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 95/242 (39%), Gaps = 9/242 (3%)
Query: 360 IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 419
+K DN ++ +M ++A D+ G + Y ++ CK RT E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 420 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 479
E+ S +Q + Y+ LI S A L DM+ + +Y +++ G+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 480 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 539
R E A L E + +E + ++I + K G++ R M+ PN
Sbjct: 691 SIISRVE-EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 540 DQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVK-GGFF 598
TY +I GY + NV + R L+ KGI D F+Y +K GG
Sbjct: 750 KITYTVMIGGYA---RDGNV----TEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVL 802
Query: 599 DA 600
+A
Sbjct: 803 EA 804
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 139/350 (39%), Gaps = 39/350 (11%)
Query: 233 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 292
+ DA V+ M+ G P+ + + L + G K E++ LM G S Y+
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 293 LISGYVKSG-------------------NLASMESTI------------LRSLSDEDRKD 321
LI GY K+G N S S I LR + + ++
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 322 WNFGGETFCAVVKEYLRKG-NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLS 380
+ GG ++ + G + K L K + + N++ +G+ A G
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA----GKL 521
Query: 381 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 440
D+A I E+ G + Y ++ C + + EA + + E+ GL+ D TY L
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 441 IETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 499
I + + A + D R +PD+ +Y ++ G + R E F DE++
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVY-TYSVMIDGCCKAERTEEGQEFFDEMM-SK 639
Query: 500 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 549
++ T +N +I A+C++GRL A M PN TY SLI G
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 159/384 (41%), Gaps = 54/384 (14%)
Query: 197 FEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFG 256
F++ C A D + + PDV A+ C + V +A ++ M GV P+ +TF
Sbjct: 242 FQKCCE-AFDVVCKGVSPDVYLFTTAINAFC-KGGKVEEAVKLFSKMEEAGVAPNVVTFN 299
Query: 257 FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSD 316
+ + G ++ + M E G + YS L+ G ++ +
Sbjct: 300 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG------------ 347
Query: 317 EDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVS 376
D F V+KE +KG P N+ N++ +++ +
Sbjct: 348 ----DAYF-------VLKEMTKKGF---------------PPNVIVYNNL----IDSFIE 377
Query: 377 MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVET 436
G +KA I D M + G S+ Y ++K YCK + A L+ E+ S G ++ +
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 437 YDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRP----ELMAAFL 492
+ ++I S F SA +M + G T+++GL ++ + EL FL
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 493 DEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVS 552
++ V T N+++H C+AG+L++A R + + + +Y +LI+G
Sbjct: 498 NK-----GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 553 AEKHFNVLMLWND-VKRKLSSDGH 575
+K M ++ VKR L D +
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNY 576
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 95/242 (39%), Gaps = 9/242 (3%)
Query: 360 IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 419
+K DN ++ +M ++A D+ G + Y ++ CK RT E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 420 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 479
E+ S +Q + Y+ LI S A L DM+ + +Y +++ G+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 480 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 539
R E A L E + +E + ++I + K G++ R M+ PN
Sbjct: 691 SIISRVE-EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 540 DQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVK-GGFF 598
TY +I GY + NV + R L+ KGI D F+Y +K GG
Sbjct: 750 KITYTVMIGGYA---RDGNV----TEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVL 802
Query: 599 DA 600
+A
Sbjct: 803 EA 804
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 18/287 (6%)
Query: 330 CAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 389
CA++ LRK + + +K+ +K + G+V + GL ++A I E
Sbjct: 311 CAILITTLRKAG-RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTE 369
Query: 390 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 449
M G VY ++ AY K N E L E+ GL+ TY+ L++
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQ 429
Query: 450 FQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAA--FLD-EVVGDPRIEVGT 505
+L R+M + + P++K SY +++ + MAA FL + VG ++ +
Sbjct: 430 PDIVETLLREMEDLGLEPNVK-SYTCLISAYGRTKKMSDMAADAFLRMKKVG---LKPSS 485
Query: 506 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 565
H + ++IHA+ +G E A +F M +P+ +TY S+++ + + ++ +W
Sbjct: 486 HSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKL 545
Query: 566 VKRKLSSDGHKGIKFDHN-LVDAFLYAMVKGGFFDAAMQVVEKSHEM 611
+ R + KG + +N L+D F K G + A VV + +M
Sbjct: 546 MLR----EKIKGTRITYNTLLDGF----AKQGLYIEARDVVSEFSKM 584
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 3/200 (1%)
Query: 359 NIKADNSIGYGIVNACVSMGLSDK-AHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 417
N+ DN ++ G S K I ++M+ G V+ ++K++C E E
Sbjct: 303 NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEE 362
Query: 418 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 477
A ++ E+ G++ + Y+ L++ S + LF +MR+ + +Y +M
Sbjct: 363 ALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMD 422
Query: 478 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED-ARRTFRRMNFLQF 536
+P+++ L E + D +E + +I A+ + ++ D A F RM +
Sbjct: 423 AYARRMQPDIVETLLRE-MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGL 481
Query: 537 EPNDQTYLSLINGYVSAEKH 556
+P+ +Y +LI+ Y + H
Sbjct: 482 KPSSHSYTALIHAYSVSGWH 501
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 141/344 (40%), Gaps = 19/344 (5%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 273
PD C + S + + MS GV+ + FG L + +GL+E+
Sbjct: 306 PDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALV 365
Query: 274 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 333
++ M + G + + Y+ L+ Y KS ++ +E + + D+ K T+ ++
Sbjct: 366 IQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEG-LFTEMRDKGLKP---SAATYNILM 421
Query: 334 KEYLRKGNIKGLANLINEAQK--LEPSNIKADNSI--GYGIVNACVSMGLSDKAHSILDE 389
Y R+ + L+ E + LEP N+K+ + YG +SD A
Sbjct: 422 DAYARRMQPDIVETLLREMEDLGLEP-NVKSYTCLISAYGRTKK-----MSDMAADAFLR 475
Query: 390 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 449
M +G Y ++ AY +A E+ G++ VETY ++++ S D
Sbjct: 476 MKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGD 535
Query: 450 FQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR--IEVGTHD 507
+++ M ++ + +Y T++ G + L D V + ++
Sbjct: 536 TGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQG---LYIEARDVVSEFSKMGLQPSVMT 592
Query: 508 WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV 551
+N +++A+ + G+ + + M L +P+ TY ++I +V
Sbjct: 593 YNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFV 636
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 107/258 (41%), Gaps = 10/258 (3%)
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYA-VKGLQEK 270
+KP A N ++ ++ E ++ M +LG+ P+ ++ L Y K + +
Sbjct: 410 LKPSAATYNILMDAYARRMQPDI-VETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDM 468
Query: 271 INELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFC 330
+ + M + G Y+ LI Y SG S + ++ ET+
Sbjct: 469 AADAFLRMKKVGLKPSSHSYTALIHAYSVSG----WHEKAYASFEEMCKEGIKPSVETYT 524
Query: 331 AVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEM 390
+V+ + R G+ L + + IK +++ GL +A ++ E
Sbjct: 525 SVLDAFRRSGDTGKLMEIWKLMLR---EKIKGTRITYNTLLDGFAKQGLYIEARDVVSEF 581
Query: 391 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 450
+ +G + Y ++ AY + + A+ L+ E+++ L+ D TY +I + +DF
Sbjct: 582 SKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDF 641
Query: 451 QSAFSLFRDM-REARVPD 467
+ AF + M + +VPD
Sbjct: 642 KRAFFYHKMMVKSGQVPD 659
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 161/397 (40%), Gaps = 57/397 (14%)
Query: 213 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 272
KP+VA L C + + A RV+ M + G+ PD + +L +G
Sbjct: 103 KPNVAHSTQLLYDLC-KANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAM 161
Query: 273 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 332
+L M + G + V Y+ L+ G G+L + F
Sbjct: 162 QLVEKMEDHGYPSNTVTYNALVRGLCMLGSL---------------NQSLQF-------- 198
Query: 333 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMN 391
V+ ++KG L P N+ Y ++ A +D+A +LDE+
Sbjct: 199 VERLMQKG--------------LAP------NAFTYSFLLEAAYKERGTDEAVKLLDEII 238
Query: 392 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 451
GG L Y +L +CKE RT +A L E+ + G + +V +Y+ L+ ++
Sbjct: 239 VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWE 298
Query: 452 SAFSLFRDMREA-RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV-GDPRIEVGTHDWN 509
A SL +M R P + +Y ++ L + R E L E+ G+ + V +N
Sbjct: 299 EANSLLAEMDGGDRAPSVV-TYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYN 357
Query: 510 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY---LSLINGYVSAEKHFNVLMLWNDV 566
+I CK G+++ + M + + +PN+ TY SL ++ F ++ ++
Sbjct: 358 PVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNK 417
Query: 567 KRKLSSDGHKGIKFD----HNLVDAF--LYAMVKGGF 597
++ + D +K + N AF LY M + GF
Sbjct: 418 QKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGF 454
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 160/375 (42%), Gaps = 32/375 (8%)
Query: 206 DEKLEFMK-----PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL-- 258
++ E MK P++ +A ++G C + +V A + + + P+ + FG L
Sbjct: 254 EKMFELMKKHGVLPNLYTYSAMIDGYC-KTGNVRQAYGLYKEILVAELLPNVVVFGTLVD 312
Query: 259 GYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDED 318
G+ A + + + L V M +FG Y+ LI G+ KSGN+ +E+ L S +
Sbjct: 313 GFCKARELVTAR--SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNM--LEAVGLLS----E 364
Query: 319 RKDWNFGGETFCAVVKEYLRKGNIKGLA--NLINEA----QKLEPSNIKADNSIGYGIVN 372
+ N + F + I GL + + EA QK++ I ++ +++
Sbjct: 365 MESLNLSPDVFTYTIL-------INGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417
Query: 373 ACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQL 432
++A + EM A G + + ++ YC A L E++ G+
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477
Query: 433 DVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFL 492
DV TY ALI+ + + A L+ DM EA + ++ ++ G + R + F
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFY 537
Query: 493 DEVVGDPRIEVGTH-DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV 551
E + + H + +I C+ G + A R F M P+ +Y+S++ G++
Sbjct: 538 QE--NNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHL 595
Query: 552 SAEKHFNVLMLWNDV 566
++ + +ML D+
Sbjct: 596 QEKRITDTMMLQCDM 610
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 7/190 (3%)
Query: 363 DNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILV 422
D I + + C GL K +LDEM +LG + +Y + C++N+ EA +
Sbjct: 198 DVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMF 257
Query: 423 MEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMEN 482
+ G+ ++ TY A+I+ + + + A+ L++++ A + + T++ G +
Sbjct: 258 ELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKA 317
Query: 483 HRPELMAAFLDEVVG---DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 539
+ +V DP + V +N +IH CK+G + +A M L P+
Sbjct: 318 RELVTARSLFVHMVKFGVDPNLYV----YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 540 DQTYLSLING 549
TY LING
Sbjct: 374 VFTYTILING 383
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 111/519 (21%), Positives = 206/519 (39%), Gaps = 77/519 (14%)
Query: 112 LGDIHNLKRAFASAVFLMERNPMVLESETIHAMLDSMK--GANTAAPAF-----ALVR-- 162
L IH RA V + NP ++ + ++ ++DS K G AF A +R
Sbjct: 124 LSSIHTHDRASNLLVMFVSNNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNK 183
Query: 163 -------C--MFKNRYFVPFAMW-GNVLVEIIRKS--------GNLAAFLPVFEESCRVA 204
C + +R VPF + NVL ++R + N + V ++
Sbjct: 184 RMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQ 243
Query: 205 L-----------DEKLEFMK--------PDVAACNAALEGCCCELESVTDAERVVGTMSN 245
L +E ++ + PD + A++ C + V + +
Sbjct: 244 LLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGK 303
Query: 246 LGVRPDELTFGFLGYLYAVKG-LQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLA 304
LGV + T+ + + +G ++E + ++ ++G FG + ++L++GY K GN
Sbjct: 304 LGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVG-FGIPMSVIAATSLVNGYCK-GNEL 361
Query: 305 SMESTILRSLSDE----DRKDWNFGGETFCA------VVKEYLRKGN------------- 341
+ + +E D+ ++ E FC ++ Y+R +
Sbjct: 362 GKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTM 421
Query: 342 IKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSM-----GLSDKAHSILDEMNALGGS 396
I+G + LE N ++ I +G + + + G D A S L M G
Sbjct: 422 IQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIE 481
Query: 397 VGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSL 456
+ Y ++ A+C+ A + E+ GL+ + TY LI+ ++D Q+A+ +
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 457 FRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFC 516
M + + Y TI+ GL + + L ++ + R + +NSII F
Sbjct: 542 INQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFV 601
Query: 517 KAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 555
K G + A T+R M+ PN T+ SLING+ + +
Sbjct: 602 KVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNR 640
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/345 (19%), Positives = 143/345 (41%), Gaps = 44/345 (12%)
Query: 261 LYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRK 320
L+ +G + +M + G VFY+N++ + + N+ + +I + ++ +
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNM-DLARSIFSEMLEKGLE 516
Query: 321 DWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLS 380
NF T+ ++ + + + + ++IN+ + SN +A+ I I+N +G +
Sbjct: 517 PNNF---TYSILIDGFFKNKDEQNAWDVINQ---MNASNFEANEVIYNTIINGLCKVGQT 570
Query: 381 DKA--------------------HSILD----------------EMNALGGSVGLGVYIP 404
KA +SI+D EM+ G S + +
Sbjct: 571 SKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTS 630
Query: 405 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 464
++ +CK NR A + E+ S L+LD+ Y ALI+ D ++A++LF ++ E
Sbjct: 631 LINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELG 690
Query: 465 VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 524
+ Y ++++G + + ++V D I + ++I K G + A
Sbjct: 691 LMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND-GISCDLFTYTTMIDGLLKDGNINLA 749
Query: 525 RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 569
+ + L P++ ++ L+NG + + ++K+K
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKK 794
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 116/530 (21%), Positives = 200/530 (37%), Gaps = 136/530 (25%)
Query: 168 RYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCC 227
R +P + N L++ K+GN P E+S +V K + ++P + N L+G
Sbjct: 243 RRLLPSLITYNTLIDGYCKAGN-----P--EKSFKVRERMKADHIEPSLITFNTLLKGLF 295
Query: 228 CELESVTDAERVVGTMSNLGVRPDELTFGFL--GY-----LYAVKGLQEKINELEVLMGE 280
+ V DAE V+ M +LG PD TF L GY A G+ E + V M
Sbjct: 296 -KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNA 354
Query: 281 FGCS----------------------------NKKVFYSNLISGYVKSGNLA-------S 305
+ CS +V Y+ +I GY + G+L +
Sbjct: 355 YTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEA 414
Query: 306 ME-----------STILRSL--------SDEDRKDWNFGG-----ETFCAVVKEYLRK-- 339
ME + ++R ++++ G ET+ ++ Y RK
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 340 -----------------GNIKGLANLIN---------EAQ----KLEPSNIKADNSIGYG 369
N+ LIN EAQ +E + I
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 370 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
+++ C S G + A EM G + L Y ++ + +EA L++EIS G
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLME------- 481
L+ DV TY++LI + + Q +L+ +M+ + + P LK +L I E
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTER 654
Query: 482 -----NHRPELMA----------------AF-LDEVVGDPRIEVGTHDWNSIIHAFCKAG 519
+ +P+L+ AF L + + + I + +NS+I K G
Sbjct: 655 LFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 714
Query: 520 RLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 569
+L + R MN + EP TY ++ G+ + + + + + +++ K
Sbjct: 715 KLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 8/169 (4%)
Query: 437 YDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV 496
Y+ LI+ + A LF +M R+ +Y T++ G + PE + +
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276
Query: 497 GDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKH 556
D IE +N+++ KAG +EDA + M L F P+ T+ L +GY S EK
Sbjct: 277 AD-HIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKA 335
Query: 557 FNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVV 605
L ++ + G+K + L A+ K G + A +++
Sbjct: 336 EAALGVY-------ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 199/488 (40%), Gaps = 42/488 (8%)
Query: 82 EAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETI 141
+A K F ++ P ++ S++ H L ++ L+ AF + E+ + T
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIH--GLCEVGRLEEAFGLKDQMGEKGCQP-STRTY 304
Query: 142 HAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEES- 200
++ ++ AF L M R P VL++ + + G + EE+
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIP-RGCKPNVHTYTVLIDGLCRDGKI-------EEAN 356
Query: 201 --CRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL 258
CR + +++ P V NA + G C + V A ++ M +P+ TF L
Sbjct: 357 GVCRKMVKDRI---FPSVITYNALINGYCKD-GRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 259 GYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDED 318
G K L M + G S V Y+ LI G + G++ +T + LS +
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM----NTAYKLLSSMN 468
Query: 319 RKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMG 378
D TF A++ + ++G + + + I D G +++ +G
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR---KGISLDEVTGTTLIDGVCKVG 525
Query: 379 LSDKAHSILD---EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVE 435
+ A IL+ +M L L V + +L CK E ++ +I+ GL V
Sbjct: 526 KTRDALFILETLVKMRILTTPHSLNVILDMLSKGCK---VKEELAMLGKINKLGLVPSVV 582
Query: 436 TYDALIETSMSSQDFQSAFSLFRDMR-EARVPDLKGSYLTIMTGLMENHRPE----LMAA 490
TY L++ + S D +F + M+ +P++ Y I+ GL + R E L++A
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY-PYTIIINGLCQFGRVEEAEKLLSA 641
Query: 491 FLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
D V + + ++ + G+L+ A T R M +E ND+ Y SL+ G+
Sbjct: 642 MQDSGVSPNHVT-----YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Query: 551 VSAEKHFN 558
V ++K +
Sbjct: 697 VLSQKGID 704
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 20/251 (7%)
Query: 370 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
++ A GL DKA ++ DEM G + Y ++ C++ + EA + ++
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELM 488
+ V TY+ALI AF L M + A P+++ ++ +M GL +P
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR-TFNELMEGLCRVGKPYKA 425
Query: 489 AAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 548
L ++ D + +N +I C+ G + A + MN EP+ T+ ++IN
Sbjct: 426 VHLLKRML-DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 549 GYVSAEK-----HFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQ 603
+ K F LML KGI D + + K G A+
Sbjct: 485 AFCKQGKADVASAFLGLML------------RKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 604 VVEKSHEMKIF 614
++E +M+I
Sbjct: 533 ILETLVKMRIL 543
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 80/193 (41%), Gaps = 8/193 (4%)
Query: 383 AHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 442
A+ M A G VG+ Y I+ A CK T A + + +I G LD +L+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 443 TSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAF-LDEVVGDPR 500
+ + A +F M +E SY ++ GL E R E AF L + +G+
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLE--EAFGLKDQMGEKG 296
Query: 501 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVL 560
+ T + +I A C G ++ A F M +PN TY LI+G K +
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK----I 352
Query: 561 MLWNDVKRKLSSD 573
N V RK+ D
Sbjct: 353 EEANGVCRKMVKD 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 11/242 (4%)
Query: 362 ADNSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 420
A NS+ Y I ++ +G ++A + D+M G Y ++KA C +A
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 421 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 480
L E+ G + +V TY LI+ + A + R M + R+ +Y ++ G
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 481 ENHRPELMAAFLDEVVGDPR-IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 539
++ R ++ AF V + R + +N ++ C+ G+ A +RM P+
Sbjct: 383 KDGR--VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440
Query: 540 DQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFD 599
+Y LI+G + E H N + LSS I+ D A + A K G D
Sbjct: 441 IVSYNVLIDG-LCREGHMNT------AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 600 AA 601
A
Sbjct: 494 VA 495
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 154/418 (36%), Gaps = 55/418 (13%)
Query: 215 DVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKIN 272
++ CN L C C ++ A +G M LG P +TFG L G+ + + + +
Sbjct: 115 NLCTCNILLN-CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR-VYDALY 172
Query: 273 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 332
+ ++G G V Y+ +I G KS + + + R D D T+ ++
Sbjct: 173 MFDQMVG-MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV----VTYNSL 227
Query: 333 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 392
+ G +++ K E I D +++ACV G +A +EM
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKRE---IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 393 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 452
+ Y ++ C +R EA + + S G DV TY LI S+ +
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 453 AFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSII 512
LF +M + G++ N T + +I
Sbjct: 345 GMKLFCEMSQ--------------RGVVRN----------------------TVTYTILI 368
Query: 513 HAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSS 572
+C+AG+L A FRRM F PN TY L++G K L++ D+++
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK---- 424
Query: 573 DGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKK 630
G+ D + + M K G A + + + D W Y + +KK
Sbjct: 425 ---NGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 12/251 (4%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 273
PDV NA ++ C E V++AE M + PD +T+ L Y + ++ E
Sbjct: 254 PDVFTFNALIDACVKE-GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 274 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 333
+ M GC V YS LI+GY KS + ++ + ++ T+ ++
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG----MKLFCEMSQRGVVRNTVTYTILI 368
Query: 334 KEYLRKGNIKGLANLINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 391
+ Y R G + + + P NI N + +G+ + G +KA IL +M
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHP-NIITYNVLLHGLCDN----GKIEKALVILADMQ 423
Query: 392 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 451
G + Y I++ CK A+A + ++ GL D+ TY ++ +
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR 483
Query: 452 SAFSLFRDMRE 462
A +LFR M+E
Sbjct: 484 EADALFRKMKE 494
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 150/380 (39%), Gaps = 50/380 (13%)
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 271
+ PD AC A + G C + E V + + V+ + + L + G EK
Sbjct: 180 VSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKA 239
Query: 272 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 331
L+ M + GC V Y+ L++ Y + L E +++ R ++
Sbjct: 240 EALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGV----MAEMVRSGIQLDAYSYNQ 295
Query: 332 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 391
++K + R + N + +++EP S I C + + KA+ + +EM
Sbjct: 296 LLKRHCRVSHPDKCYNFM--VKEMEPRGFCDVVSYSTLIETFCRASN-TRKAYRLFEEMR 352
Query: 392 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 451
G + + Y ++KA+ +E ++ A L+ +++ GL D Y +++ S +
Sbjct: 353 QKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVD 412
Query: 452 SAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSI 511
A+ +F DM E + P+ ++ +NS+
Sbjct: 413 KAYGVFNDMIEHEIT------------------PDAIS------------------YNSL 436
Query: 512 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLS 571
I C++GR+ +A + F M + P++ T+ +I G + +K +W+ +
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM---- 492
Query: 572 SDGHKGIKFDHNLVDAFLYA 591
KG D ++ D + A
Sbjct: 493 ---DKGFTLDRDVSDTLIKA 509
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 2/171 (1%)
Query: 381 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 440
D ++L +M LG + + L C+EN+ A + G + DV +Y L
Sbjct: 96 DLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTIL 155
Query: 441 IETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 499
I + A ++ M R PD K ++ GL + +L + E +
Sbjct: 156 INGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC-AALVVGLCHARKVDLAYEMVAEEIKSA 214
Query: 500 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
R+++ T +N++I FCKAGR+E A M+ + EP+ TY L+N Y
Sbjct: 215 RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 159/400 (39%), Gaps = 59/400 (14%)
Query: 210 EFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL-GYLYAVKGLQ 268
+F +PDV A NA + G C ++ + DA RV+ M + PD +T+ + G L + L
Sbjct: 152 KFGQPDVFAYNALINGFC-KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 269 EKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET 328
+ L L+ + C + Y+ LI E+T+L DE K
Sbjct: 211 LALKVLNQLLSD-NCQPTVITYTILI------------EATMLEGGVDEALK-------- 249
Query: 329 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 388
++ E L +G +K D I+ G+ D+A ++
Sbjct: 250 ---LMDEMLSRG-------------------LKPDMFTYNTIIRGMCKEGMVDRAFEMVR 287
Query: 389 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 448
+ G + Y +L+A + + E L+ ++ S +V TY LI T
Sbjct: 288 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 449 DFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGT 505
+ A +L + M+E + SY ++ R ++ FL+ ++ D P I
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV--- 404
Query: 506 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 565
++N+++ CK G+ + A F ++ + PN +Y ++ + S+ L + +
Sbjct: 405 -NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 566 VKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVV 605
+ GI D ++ + + + G D A +++
Sbjct: 464 MM-------SNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 123/308 (39%), Gaps = 26/308 (8%)
Query: 204 ALDEKLEFM--------KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTF 255
+DE L+ M KPD+ N + G C E V A +V + G PD +++
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE-GMVDRAFEMVRNLELKGCEPDVISY 301
Query: 256 GFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLS 315
L +G E+ +L M C V YS LI+ + G + E+ L L
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE--EAMNLLKLM 359
Query: 316 DEDRKDWNFGGETFCAVVKEYLRKGN----IKGLANLINEAQKLEPSNIKADNSIGYGIV 371
E K ++ ++ + R+G I+ L +I++ + + Y V
Sbjct: 360 KE--KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC--------LPDIVNYNTV 409
Query: 372 NACVSM-GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGL 430
A + G +D+A I ++ +G S Y + A A +++E+ S+G+
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Query: 431 QLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAA 490
D TY+++I AF L DMR +Y ++ G + HR E
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN 529
Query: 491 FLDEVVGD 498
L+ +VG+
Sbjct: 530 VLESMVGN 537
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 136/328 (41%), Gaps = 37/328 (11%)
Query: 287 KVFYSNLISG-YVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 345
K+F+ + SG Y++S +L +E+ + RK +N ++K + NI
Sbjct: 94 KIFHRSCRSGNYIESLHL--LETMV--------RKGYNPDVILCTKLIKGFFTLRNIPKA 143
Query: 346 ANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPI 405
++ +K ++ A N++ +N M D A +LD M + S Y +
Sbjct: 144 VRVMEILEKFGQPDVFAYNAL----INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM 199
Query: 406 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 465
+ + C + A ++ ++ S Q V TY LIE +M A L +M +
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 466 -PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD---WNSIIHAFCKAGRL 521
PD+ +Y TI+ G+ + E M E+V + ++ D +N ++ A G+
Sbjct: 260 KPDMF-TYNTIIRGMCK----EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKW 314
Query: 522 EDARRTFRRMNFLQFEPNDQTYLSLINGYV---SAEKHFNVLMLWNDVKRKLSSDGHKGI 578
E+ + +M + +PN TY LI E+ N+L L + KG+
Sbjct: 315 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE----------KGL 364
Query: 579 KFDHNLVDAFLYAMVKGGFFDAAMQVVE 606
D D + A + G D A++ +E
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLE 392
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 153/373 (41%), Gaps = 51/373 (13%)
Query: 178 NVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAE 237
N+L+ K GN++ VF+E + +L +P V + N + G C ++ ++ +
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSL-------QPTVVSFNTLINGYC-KVGNLDEGF 295
Query: 238 RVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGY 297
R+ M RPD T+ L + + + L M + G V ++ LI G+
Sbjct: 296 RLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 298 VKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEP 357
++G + M+ + + LS + D + +V + + G++ N+++ +
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVL----YNTLVNGFCKNGDLVAARNIVDGMIR--- 408
Query: 358 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 417
++ D +++ G + A I EM+ G + + ++ CKE R +
Sbjct: 409 RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVID 468
Query: 418 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 477
A + E+ +G++ D TY +++ D Q+ F L ++M+
Sbjct: 469 AERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQS--------------- 513
Query: 478 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFE 537
+ H P ++ +N +++ CK G++++A M +
Sbjct: 514 ---DGHVPSVVT------------------YNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Query: 538 PNDQTYLSLINGY 550
P+D TY +L+ G+
Sbjct: 553 PDDITYNTLLEGH 565
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 150/364 (41%), Gaps = 26/364 (7%)
Query: 290 YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLI 349
++ L++ + K GN++ + + + ++ +F ++ Y + GN+ L
Sbjct: 243 FNILMNKFCKEGNISDAQ----KVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL- 297
Query: 350 NEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAY 409
++E S + D ++NA D AH + DEM G ++ ++ +
Sbjct: 298 --KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 410 CKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDL 468
+ ++ S GLQ D+ Y+ L+ + D +A ++ M R PD
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD- 414
Query: 469 KGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTF 528
K +Y T++ G E E+ + IE+ +++++ CK GR+ DA R
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNG-IELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 529 RRMNFLQFEPNDQTYLSLINGYV---SAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLV 585
R M +P+D TY +++ + A+ F +L +++ SDGH +N++
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLL-------KEMQSDGHVPSVVTYNVL 526
Query: 586 DAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKLKVAKLRKRNTKKME 645
L + K G A +++ + + D Y +E H + A KR +K E
Sbjct: 527 ---LNGLCKLGQMKNADMLLDAMLNIGVVPDDITY-NTLLEGHHRH--ANSSKRYIQKPE 580
Query: 646 AVIA 649
I
Sbjct: 581 IGIV 584
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 176/459 (38%), Gaps = 55/459 (11%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 273
PDVA N + C E S + ++ M G P +T+ + + Y KG + E
Sbjct: 231 PDVATFNILINVLCAE-GSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 289
Query: 274 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS------------------MESTILRSLS 315
L M G Y+ LI +S +A +T++ S
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 349
Query: 316 DEDR---------KDWNFGGE----TFCAVVKEYLRKGNIKGLANL--INEAQKLEPSNI 360
+E + + +FG TF A++ ++ +GN K + + EA+ L PS +
Sbjct: 350 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 409
Query: 361 KADNSIGYGIV-NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 419
YG++ + D A M G VG Y ++ CK EA
Sbjct: 410 S------YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463
Query: 420 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 479
+L+ E+S G+ D+ TY ALI F++A + + + Y T++
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523
Query: 480 MENHRPELMAAFLDEVVGDPRIEVGTHD---WNSIIHAFCKAGRLEDARRTFRRMNFLQF 536
+ + ++ +E T D +N ++ + CKAG++ +A R M
Sbjct: 524 CRMGCLKEAIRIYEAMI----LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579
Query: 537 EPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGG 596
PN ++ LINGY ++ + ++++ ++ GH F + + L + KGG
Sbjct: 580 LPNTVSFDCLINGYGNSGEGLKAFSVFDE----MTKVGHHPTFFTYG---SLLKGLCKGG 632
Query: 597 FFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKLKVAK 635
A + ++ H + VD Y K +AK
Sbjct: 633 HLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK 671
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 121/290 (41%), Gaps = 45/290 (15%)
Query: 261 LYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISG-YVKSGNLASMESTILRSLSDEDR 319
+Y +G+ + E+ LMG +G N V+ N I G VKSG ED
Sbjct: 172 VYLREGMIQDSLEIFRLMGLYG-FNPSVYTCNAILGSVVKSG---------------EDV 215
Query: 320 KDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGL 379
W+F +KE L++ +A NI ++N + G
Sbjct: 216 SVWSF--------LKEMLKRKICPDVATF----------NI---------LINVLCAEGS 248
Query: 380 SDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDA 439
+K+ ++ +M G + + Y +L YCK+ R A L+ + S G+ DV TY+
Sbjct: 249 FEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNM 308
Query: 440 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 499
LI S + L RDMR+ + + +Y T++ G + + + L+E++
Sbjct: 309 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEML-SF 367
Query: 500 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 549
+ +N++I G ++A + F M P++ +Y L++G
Sbjct: 368 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 129/333 (38%), Gaps = 27/333 (8%)
Query: 228 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 287
C+ + +A ++ MS G+ PD +T+ L + G + E+ + G S
Sbjct: 454 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 513
Query: 288 VFYSNLISGYVKSGNLAS----MESTILRSLSDEDRKDWNFGGETFC-----AVVKEYLR 338
+ YS LI + G L E+ IL D +N + C A +E++R
Sbjct: 514 IIYSTLIYNCCRMGCLKEAIRIYEAMILEG-HTRDHFTFNVLVTSLCKAGKVAEAEEFMR 572
Query: 339 KGNIKGLANLINEAQKLEPSNIKADNSI-GYGIVNACVSMGLSDKAHSILDEMNALGGSV 397
G+ P+ + D I GYG + G KA S+ DEM +G
Sbjct: 573 CMTSDGIL----------PNTVSFDCLINGYG------NSGEGLKAFSVFDEMTKVGHHP 616
Query: 398 GLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF 457
Y +LK CK EA + + + +D Y+ L+ S + A SLF
Sbjct: 617 TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 676
Query: 458 RDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCK 517
+M + + +Y ++++GL + + F E + + + K
Sbjct: 677 GEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFK 736
Query: 518 AGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
AG+ + +M+ L P+ T ++I+GY
Sbjct: 737 AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 769
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 117/279 (41%), Gaps = 58/279 (20%)
Query: 320 KDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIV-------- 371
K+++F F ++K Y KG +K ++ DN YG +
Sbjct: 149 KEFSFSPTVFDMILKVYAEKGLVKNALHVF-------------DNMGNYGRIPSLLSCNS 195
Query: 372 --NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS- 428
+ V G + A + D+M + S + ++ AYC+ +A + E SS
Sbjct: 196 LLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSL 255
Query: 429 GLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTG-----LMEN- 482
GL+L+V TY++LI D + + R M E V +Y +++ G LME
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 483 -HRPELM----------------------AAFLDEV-VGDPRIEVG----THDWNSIIHA 514
H EL+ D V V D IE+G T NS+I+
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
Query: 515 FCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 553
+CK+G+L +A + F RMN +P+ TY +L++GY A
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRA 414
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 140/348 (40%), Gaps = 13/348 (3%)
Query: 206 DEKLEF-MKPDVAACNAALEGCCCELESVTDAERVVG--TMSNLGVRPDELTFGFLGYLY 262
D+ + F + PDV C+ + C D V T S+LG+ + +T+ L Y
Sbjct: 214 DQMISFEVSPDVFTCSIVVNAYC--RSGNVDKAMVFAKETESSLGLELNVVTYNSLINGY 271
Query: 263 AVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDW 322
A+ G E + + LM E G S V Y++LI GY K G + E + D
Sbjct: 272 AMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQ 331
Query: 323 NFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDK 382
+ G ++ Y R G I+ + + ++ ++ + +I ++N G +
Sbjct: 332 HMYG----VLMDGYCRTGQIRDAVRVHDNMIEI---GVRTNTTICNSLINGYCKSGQLVE 384
Query: 383 AHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 442
A I MN Y ++ YC+ EA L ++ + V TY+ L++
Sbjct: 385 AEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLK 444
Query: 443 TSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIE 502
F SL++ M + V + S T++ L + + V+ +
Sbjct: 445 GYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL- 503
Query: 503 VGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
T N +I CK ++ +A+ +N + +P QTY +L +GY
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGY 551
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 18/283 (6%)
Query: 328 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACVSMGLSDKAHSI 386
T VV Y R GN+ A++ E S N + Y ++N +G + +
Sbjct: 227 TCSIVVNAYCRSGNVDKAMVF---AKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRV 283
Query: 387 LDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 446
L M+ G S + Y ++K YCK+ EA + + L D Y L++
Sbjct: 284 LRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 447 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV---VGDPRIEV 503
+ + A + +M E V + TI L+ + +++ + D ++
Sbjct: 344 TGQIRDAVRVHDNMIEIGVR----TNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKP 399
Query: 504 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 563
H +N+++ +C+AG +++A + +M + P TY L+ GY +VL LW
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLW 459
Query: 564 NDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 606
+ + +G+ D L A+ K G F+ AM++ E
Sbjct: 460 KMMLK-------RGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 183/453 (40%), Gaps = 40/453 (8%)
Query: 82 EAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETI 141
EA K +T P N L+ L LG + + K + V LM+RN + ++ T
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK----TIVGLMKRNGVCPDAVTY 399
Query: 142 HAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEESC 201
+L A +L++ M +N +P A N+L+ + K G ++ EE
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNN-CLPNAYTCNILLHSLWKMGRISEA----EELL 454
Query: 202 RVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYL 261
R ++EK + D CN ++G C E + A +V M G G LG
Sbjct: 455 R-KMNEKGYGL--DTVTCNIIVDGLCGSGE-LDKAIEIVKGMRVHG----SAALGNLGNS 506
Query: 262 YAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKD 321
Y I ++ + E C + YS L++G K+G A ++ + ++ + D
Sbjct: 507 Y--------IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPD 558
Query: 322 WNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLE-PSNIKADNSI--GYGIVNACVSMG 378
+ + + ++G I ++ + +K +++ NS+ G GI N +
Sbjct: 559 ----SVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI- 613
Query: 379 LSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYD 438
H ++DEM G S + Y ++ C+ + +AT L+ E+ + +V ++
Sbjct: 614 -----HGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFK 668
Query: 439 ALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD 498
LIE DF A +F + K ++M + L A L E V D
Sbjct: 669 YLIEAFCKVPDFDMAQEVFE--TAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLD 726
Query: 499 PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRM 531
E+GT + ++ + CK LE A +M
Sbjct: 727 RGFELGTFLYKDLVESLCKKDELEVASGILHKM 759
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 99/482 (20%), Positives = 192/482 (39%), Gaps = 40/482 (8%)
Query: 67 LQTTLHKSLI--TSDTDEAWKSFKSLTSHQA-------FPPKPLTNSLITHLSSLGDIHN 117
++ +L K+L+ T++ AW+ FK + S + P ++ +I
Sbjct: 1 MEQSLVKALLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQE 60
Query: 118 LKRAFASAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWG 177
L S+ + +L +I A + + + A P F LVR F P
Sbjct: 61 LHNLILSSSIQKTKLSSLLSVVSIFAKSNHI---DKAFPQFQLVRSRFPENK--PSVYLY 115
Query: 178 NVLVEIIRKSGNLAAFLPVFEES--CRVALDEKLEFMKPDVAACNAALEGCCCELESVTD 235
N+L+E K + ++++ C +A P N + C + V
Sbjct: 116 NLLLESCIKERRVEFVSWLYKDMVLCGIA---------PQTYTFNLLIRALC-DSSCVDA 165
Query: 236 AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLIS 295
A + M G +P+E TFG L Y GL +K EL M FG KV Y+ ++S
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 296 GYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKL 355
+ + G E + + + D TF + + ++G + + + ++ +
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDI----VTFNSRISALCKEGKVLDASRIFSDMELD 281
Query: 356 EPSNIKADNSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENR 414
E + NSI Y + + +GL + A ++ + + L Y L+ + +
Sbjct: 282 EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGK 341
Query: 415 TAEATILVMEISSSGLQLDVETY----DALIETSMSSQDFQSAFSLFRDMREARVPDLKG 470
EA ++ +++ G+ + +Y D L + M S D ++ L + R PD
Sbjct: 342 FIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLS-DAKTIVGLMK--RNGVCPDAV- 397
Query: 471 SYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRR 530
+Y ++ G + + + L E++ + + + N ++H+ K GR+ +A R+
Sbjct: 398 TYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP-NAYTCNILLHSLWKMGRISEAEELLRK 456
Query: 531 MN 532
MN
Sbjct: 457 MN 458
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 167/402 (41%), Gaps = 66/402 (16%)
Query: 210 EFMKPDVAACNAALEGCCCELESVTDAERVVGTMS---NLGV-RPDELTF-----GF--L 258
E + PD+ N+ + C E V DA R+ M LG+ RP+ +T+ GF +
Sbjct: 246 EGLVPDIVTFNSRISALCKE-GKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV 304
Query: 259 GYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDED 318
G L K L E I E + L Y+ + G V+ G E T+L+ ++D+
Sbjct: 305 GLLEDAKTLFESIRENDDLASLQS-------YNIWLQGLVRHGKFIEAE-TVLKQMTDKG 356
Query: 319 RK----DWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNA 373
+N + C + G+ + L N +++ YG +++
Sbjct: 357 IGPSIYSYNILMDGLCKL-----------GMLSDAKTIVGLMKRNGVCPDAVTYGCLLHG 405
Query: 374 CVSMGLSDKAHSILDEM---NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGL 430
S+G D A S+L EM N L + + +L + K R +EA L+ +++ G
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI---LLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 431 QLDVETYDALIETSMSSQDFQSAFSLFRDMR---EARVPDLKGSYL-------------- 473
LD T + +++ S + A + + MR A + +L SY+
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLP 522
Query: 474 ------TIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRT 527
T++ GL + R E++G+ +++ + +N IH FCK G++ A R
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGE-KLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 528 FRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 569
+ M + +TY SLI G + F + L +++K K
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 142/338 (42%), Gaps = 23/338 (6%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 273
P + + N ++G C +L ++DA+ +VG M GV PD +T+G L + Y G +
Sbjct: 359 PSIYSYNILMDGLC-KLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKS 417
Query: 274 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETF-CAV 332
L M C + L+ K G ++ E +LR ++++ +G +T C +
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE-LLRKMNEK-----GYGLDTVTCNI 471
Query: 333 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 392
+ + + G L + ++ + ++G + N+ + GL D + L E N
Sbjct: 472 IVD-----GLCGSGELDKAIEIVKGMRVHGSAALG-NLGNSYI--GLVDDS---LIENNC 520
Query: 393 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 452
L + Y +L CK R AEA L E+ LQ D Y+ I S
Sbjct: 521 LPDLI---TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISS 577
Query: 453 AFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSII 512
AF + +DM + +Y +++ GL ++ + +DE + + I +N+ I
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDE-MKEKGISPNICTYNTAI 636
Query: 513 HAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
C+ ++EDA M PN ++ LI +
Sbjct: 637 QYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 156/403 (38%), Gaps = 40/403 (9%)
Query: 222 ALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQE--KINELEVLMG 279
AL G C + A ++ M G + D F+ Y ++ L KI+ + +L
Sbjct: 202 ALIGACARNNDIEKALNLIAKMRQDGYQSD-----FVNYSLVIQSLTRSNKIDSVMLLRL 256
Query: 280 EFGCSNKKV-----FYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVK 334
K+ +++I G+ KSG+ S L+ L + T +++
Sbjct: 257 YKEIERDKLELDVQLVNDIIMGFAKSGD----PSKALQLLGMAQATGLSAKTATLVSIIS 312
Query: 335 EYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALG 394
G L E L S IK ++ V G A S++ EM G
Sbjct: 313 ALADSGRTLEAEALFEE---LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 395 GSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAF 454
S Y ++ AY R A I++ E+ + +Q + + L+ ++Q F
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 455 SLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIH 513
+ ++M+ V PD + + I T N M F D ++ + IE WN++I
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTF-DRMLSEG-IEPDRVTWNTLID 487
Query: 514 AFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSD 573
CK GR A F M P TY +IN Y E+ W+D+KR L
Sbjct: 488 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER-------WDDMKRLLGKM 540
Query: 574 GHKGIKFD----HNLVDAFLYAMVKGGFFDAAMQVVEKSHEMK 612
+GI + LVD + K G F+ A++ +E EMK
Sbjct: 541 KSQGILPNVVTHTTLVDVY----GKSGRFNDAIECLE---EMK 576
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 193/485 (39%), Gaps = 40/485 (8%)
Query: 115 IHNLKRA--FASAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVP 172
IH L R+ A L ++ L T +A++ + N A L+ M ++ Y
Sbjct: 174 IHALGRSEKLYEAFLLSQKQ--TLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSD 231
Query: 173 FAMWGNVLVEIIRKSG-NLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELE 231
F + V+ + R + + L +++E R +KLE DV N + G +
Sbjct: 232 FVNYSLVIQSLTRSNKIDSVMLLRLYKEIER----DKLEL---DVQLVNDIIMGFAKSGD 284
Query: 232 SVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEF---GCSNKKV 288
+ A +++G G+ T + A G + E E L E G +
Sbjct: 285 P-SKALQLLGMAQATGLSAKTATLVSIISALADSG---RTLEAEALFEELRQSGIKPRTR 340
Query: 289 FYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANL 348
Y+ L+ GYVK+G L ES + S+ +++ + T+ ++ Y+ G + +
Sbjct: 341 AYNALLKGYVKTGPLKDAESMV----SEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIV 396
Query: 349 INEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKA 408
+ E +E +++ ++ + ++ G K +L EM ++G Y ++
Sbjct: 397 LKE---MEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDT 453
Query: 409 YCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDL 468
+ K N A + S G++ D T++ LI+ A +F M
Sbjct: 454 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPC 513
Query: 469 KGSYLTIMTGLMENHRPELMAAFLDEVVGDPRI-EVGTHDWNSIIHAFCKAGRLEDARRT 527
+Y ++ + R + M L ++ + V TH +++ + K+GR DA
Sbjct: 514 ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTH--TTLVDVYGKSGRFNDAIEC 571
Query: 528 FRRMNFLQFEPNDQTYLSLINGYVS---AEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN- 583
M + +P+ Y +LIN Y +E+ N R ++SDG K N
Sbjct: 572 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF-------RVMTSDGLKPSLLALNS 624
Query: 584 LVDAF 588
L++AF
Sbjct: 625 LINAF 629
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 154/395 (38%), Gaps = 31/395 (7%)
Query: 186 KSGNLAAFLPVFEESCRV----ALDEKLE--FMKPDVAACNAALEGCCCELESVTDAERV 239
K+ L + + +S R AL E+L +KP A NA L+G + + DAE +
Sbjct: 303 KTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYV-KTGPLKDAESM 361
Query: 240 VGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVK 299
V M GV PDE T+ L Y G E + M +S L++G+
Sbjct: 362 VSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRD 421
Query: 300 SGN-------LASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA 352
G L M+S ++ DR+ +N +TF G L + +
Sbjct: 422 RGEWQKTFQVLKEMKSIGVKP----DRQFYNVVIDTF----------GKFNCLDHAMTTF 467
Query: 353 QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKE 412
++ I+ D +++ G A + + M G Y ++ +Y +
Sbjct: 468 DRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQ 527
Query: 413 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY 472
R + L+ ++ S G+ +V T+ L++ S F A +M+ + Y
Sbjct: 528 ERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMY 587
Query: 473 LTIMTGLMENHRPE-LMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRM 531
++ + E + AF V+ ++ NS+I+AF + R +A + M
Sbjct: 588 NALINAYAQRGLSEQAVNAF--RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYM 645
Query: 532 NFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 566
+P+ TY +L+ + +K V +++ ++
Sbjct: 646 KENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 136/342 (39%), Gaps = 21/342 (6%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELT-FGFLGYLYAVKGLQEKIN 272
P+V N + G C +L V +A ++ M + G PD+++ + +GYL K + E +
Sbjct: 310 PNVVTYNCMIRGYC-DLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRD 368
Query: 273 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 332
++ + E G +V Y+ LI K + L L D K + + A+
Sbjct: 369 LMKKMAKEHGLVPDQVTYNTLIHMLTKHDH----ADEALWFLKDAQEKGFRIDKLGYSAI 424
Query: 333 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 392
V ++G + +LINE L + D +VN +G DKA +L M+
Sbjct: 425 VHALCKEGRMSEAKDLINEM--LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHT 482
Query: 393 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 452
G Y +L C+ ++ EA ++ + TY ++
Sbjct: 483 HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSE 542
Query: 453 AFSLFRDMREARVPDLKGSYL------TIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 506
A + R+M LKG + ++ L + R F++E + + +
Sbjct: 543 ACDVVREMV------LKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL-NKGCAINVV 595
Query: 507 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 548
++ ++IH FC+ L+ A M + + TY +L++
Sbjct: 596 NFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVD 637
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 1/185 (0%)
Query: 381 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS-GLQLDVETYDA 439
++A +L++M++ G Y I+ CKE R E L+ +++ GL D TY+
Sbjct: 329 EEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNT 388
Query: 440 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 499
LI A +D +E K Y I+ L + R ++E++
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG 448
Query: 500 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNV 559
+ ++++ FC+ G ++ A++ + M+ +PN +Y +L+NG K
Sbjct: 449 HCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA 508
Query: 560 LMLWN 564
+ N
Sbjct: 509 REMMN 513
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 103/229 (44%), Gaps = 12/229 (5%)
Query: 327 ETFCAVVKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAH 384
E F V+ Y R G ++ ++ Q+ +EP+ + + +I + V +KA
Sbjct: 243 EAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTI-----DVFVRANRLEKAL 297
Query: 385 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 444
L+ M +G + Y +++ YC +R EA L+ ++ S G D +Y ++
Sbjct: 298 RFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYL 357
Query: 445 MSSQDFQSAFSLFRDMREAR--VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIE 502
+ L + M + VPD + +Y T++ L ++ + FL + +
Sbjct: 358 CKEKRIVEVRDLMKKMAKEHGLVPD-QVTYNTLIHMLTKHDHADEALWFLKD-AQEKGFR 415
Query: 503 VGTHDWNSIIHAFCKAGRLEDARRTFRRM-NFLQFEPNDQTYLSLINGY 550
+ +++I+HA CK GR+ +A+ M + P+ TY +++NG+
Sbjct: 416 IDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGF 464
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/395 (17%), Positives = 169/395 (42%), Gaps = 23/395 (5%)
Query: 160 LVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAAC 219
L++ M K VP + N L+ ++ K + L ++ A ++ K +A
Sbjct: 369 LMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKD----AQEKGFRIDKLGYSAI 424
Query: 220 NAALEGCCCELESVTDAERVVGTMSNLG-VRPDELTFGFLGYLYAVKGLQEKINELEVLM 278
AL C+ +++A+ ++ M + G PD +T+ + + G +K +L +M
Sbjct: 425 VHAL----CKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 279 GEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLR 338
G V Y+ L++G ++G S+E+ + ++S+E W+ T+ ++ R
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGK--SLEAREMMNMSEEHW--WSPNSITYSVIMHGLRR 536
Query: 339 KGNIKGLANLINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGS 396
+G + +++ E + P ++ + ++ + G + +A ++E G +
Sbjct: 537 EGKLSEACDVVREMVLKGFFPGPVEINL-----LLQSLCRDGRTHEARKFMEECLNKGCA 591
Query: 397 VGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSL 456
+ + + ++ +C+ + A ++ ++ DV TY L++T A L
Sbjct: 592 INVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATEL 651
Query: 457 FRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFC 516
+ M + +Y T++ + + + + A L++++ + +N +I C
Sbjct: 652 MKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRT---IYNQVIEKLC 708
Query: 517 KAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV 551
G+LE+A ++ + +T +L+ GY+
Sbjct: 709 VLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYL 743
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 105/497 (21%), Positives = 192/497 (38%), Gaps = 125/497 (25%)
Query: 94 QAFPPKPLT-NSLITHLSSLGDIHNLKRAFASAVFLMERNPMVLESETIHAML-DSMKGA 151
+ F P T N++I L G K FA M R+ + +S T ++L ++ K
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAE----MLRSGLSPDSTTYRSLLMEACKKG 354
Query: 152 NTAAP--AFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNL------------AAFLP-- 195
+ F+ +R +R VP + + ++ + +SGNL A +P
Sbjct: 355 DVVETEKVFSDMR----SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 196 -----VFEESCR-----VALDEKLEFMKP----DVAACNAALEGCCCELESVTDAERVVG 241
+ + CR VA++ + E ++ DV N L G C + + + +A+++
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC-KRKMLGEADKLFN 469
Query: 242 TMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSG 301
M+ + PD T L + G + EL M E V Y+ L+ G+ K G
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 302 NLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 361
++ D ++ W A+++ ++++ P+
Sbjct: 530 DI------------DTAKEIW-----------------------ADMV--SKEILPT--- 549
Query: 362 ADNSIGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 420
I Y I VNA S G +A + DEM + + + ++K YC+ ++
Sbjct: 550 ---PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 421 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR---VPDLKGSYLTIMT 477
+ ++ S G D +Y+ LI + ++ AF L + M E + VPD+
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV--------- 657
Query: 478 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFE 537
+NSI+H FC+ ++++A R+M
Sbjct: 658 ----------------------------FTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689
Query: 538 PNDQTYLSLINGYVSAE 554
P+ TY +ING+VS +
Sbjct: 690 PDRSTYTCMINGFVSQD 706
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 151/364 (41%), Gaps = 25/364 (6%)
Query: 247 GVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASM 306
GV PD +T+ L Y+ KGL E+ EL M G S Y+ +I+G K G
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 307 ESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSI 366
+ L R + T+ +++ E +KG++ + ++ + ++ D
Sbjct: 325 KEVFAEML----RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSD---MRSRDVVPDLVC 377
Query: 367 GYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEIS 426
+++ G DKA + + G +Y +++ YC++ + A L E+
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 427 SSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMENH-- 483
G +DV TY+ ++ + A LF +M E A PD SY +T L++ H
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD---SY--TLTILIDGHCK 492
Query: 484 RPELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 542
L A L + + + RI + +N+++ F K G ++ A+ + M + P +
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 543 YLSLINGYVSAEKHFNVLMLWNDVKRK-------LSSDGHKGIKFDHNLVD--AFLYAMV 593
Y L+N S +W+++ K + + KG N D +FL M+
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 594 KGGF 597
GF
Sbjct: 613 SEGF 616
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 118/311 (37%), Gaps = 44/311 (14%)
Query: 328 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 387
T +V + G ++ + +++ Q+ + D +++A S GL ++A ++
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQE---KGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 388 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 447
+ M G S G+ Y ++ CK + A + E+ SGL D TY +L+ +
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 448 QDFQSAFSLFRDMREAR-VPDLK--GSYLTIMT-------GLMENHRPELMAAFLDEVVG 497
D +F DMR VPDL S +++ T LM + + D V+
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 498 DPRIE------------------------VGTHDWNSIIHAFCKAGRLEDARRTFRRMNF 533
I+ + +N+I+H CK L +A + F M
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 534 LQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMV 593
P+ T LI+G+ N + L+ +K K I+ D + L
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK-------EKRIRLDVVTYNTLLDGFG 526
Query: 594 KGGFFDAAMQV 604
K G D A ++
Sbjct: 527 KVGDIDTAKEI 537
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 98/238 (41%), Gaps = 12/238 (5%)
Query: 369 GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYI--PILKAYCKENRTAEATILVMEIS 426
++ + V +G + A + E++ G VG+ VY ++ A CK+ + + + ++
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEISRSG--VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ 262
Query: 427 SSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPE 486
G+ D+ TY+ LI S + AF L M +Y T++ GL ++ + E
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 487 LMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSL 546
E++ + + + S++ CK G + + + F M P+ + S+
Sbjct: 323 RAKEVFAEMLRSG-LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 547 INGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQV 604
++ + + LM +N VK G+ D+ + + + G AM +
Sbjct: 382 MSLFTRSGNLDKALMYFNSVK-------EAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 129/314 (41%), Gaps = 44/314 (14%)
Query: 245 NLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLA 304
N+ V P+ TF L + K E+ E+ M E G V Y+ + + YV+ G
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETV 240
Query: 305 SMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLE-PSNIKAD 363
ES ++ + +++ N G T VV Y R+G ++ + +++ +N+
Sbjct: 241 RAESEVVEKMVMKEKAKPN--GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 364 NSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVM 423
NS+ G V G+ D+ +++ E N
Sbjct: 299 NSLINGFVEVMDRDGI-DEVLTLMKECN-------------------------------- 325
Query: 424 EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENH 483
++ DV TY ++ S+ + A +F++M +A V +Y + G +
Sbjct: 326 ------VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 379
Query: 484 RPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 543
P+ L+ ++ + R V + ++I +C G ++DA R F +M PN +T+
Sbjct: 380 EPKKAEELLETLIVESRPNVVI--FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTF 437
Query: 544 LSLINGYVSAEKHF 557
+L+ GY+ ++ +
Sbjct: 438 ETLMWGYLEVKQPW 451
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Query: 370 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
++N + G +A ++ + G L Y +L A + + + +V E+ SG
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 489
+LD ++A+I S + + A M+E + +Y T++ G +PE +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 490 AFLDEVVGDPRIEVGTH--DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 547
LD ++ + ++VG + +N ++ A+CK ++E+A ++M P+ TY ++
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 548 NGYV 551
YV
Sbjct: 231 TCYV 234
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 129/302 (42%), Gaps = 21/302 (6%)
Query: 309 TILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY 368
T+ ++L++ + T A + + G+I + + ++E S K D+
Sbjct: 66 TVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS------EVEQSGTKLDSIFFN 119
Query: 369 GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC---KENRTAEATILVMEI 425
++NA G + A L +M LG + Y ++K Y K R++E L++E
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 426 SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM---EN 482
+ + ++ T++ L++ + + A+ + + M E V +Y TI T + E
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 483 HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 542
R E + ++++V + + ++ +C+ GR+ D R RRM ++ E N
Sbjct: 240 VRAE--SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV 297
Query: 543 YLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAM 602
+ SLING+V +M + + L+ +K D + A G+ + A
Sbjct: 298 FNSLINGFVE-------VMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAA 350
Query: 603 QV 604
QV
Sbjct: 351 QV 352
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 20/265 (7%)
Query: 228 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG----LQEKINELEVLMGEFGC 283
C+ + V +A VV M GVRPD +T+ + Y KG + ++ E +++M E
Sbjct: 199 CKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE-KMVMKEKAK 257
Query: 284 SNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIK 343
N + ++ GY + G + + R E R + N F +++ ++ +
Sbjct: 258 PNGRTC-GIVVGGYCREGRVRDGLRFVRR--MKEMRVEANL--VVFNSLINGFVEVMDRD 312
Query: 344 GLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYI 403
G+ ++ ++ N+KAD ++NA S G +KA + EM G Y
Sbjct: 313 GIDEVLT---LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 369
Query: 404 PILKAY--CKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR 461
+ K Y KE + AE + + + S + +V + +I S+ A +F M
Sbjct: 370 ILAKGYVRAKEPKKAEELLETLIVES---RPNVVIFTTVISGWCSNGSMDDAMRVFNKMC 426
Query: 462 EARV-PDLKGSYLTIMTGLMENHRP 485
+ V P++K ++ T+M G +E +P
Sbjct: 427 KFGVSPNIK-TFETLMWGYLEVKQP 450
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 149/389 (38%), Gaps = 63/389 (16%)
Query: 228 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEKINELEVLMGEF---G 282
C+L V A V M PD T+ L + GL +E+I+E +L+ E G
Sbjct: 198 CKLRFVDRAIEVFRGMPERKCLPDGYTYCTL-----MDGLCKEERIDEAVLLLDEMQSEG 252
Query: 283 CSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNI 342
CS V Y+ LI G K G+L + +V KG +
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLTRVTK-----------------------LVDNMFLKGCV 289
Query: 343 KGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVY 402
P+ + N++ +G+ C+ G DKA S+L+ M + Y
Sbjct: 290 --------------PNEVTY-NTLIHGL---CLK-GKLDKAVSLLERMVSSKCIPNDVTY 330
Query: 403 IPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE 462
++ K+ R +A L+ + G L+ Y LI + A SL+R M E
Sbjct: 331 GTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE 390
Query: 463 ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLE 522
Y ++ GL +P L+ ++ + + ++S++ F K G E
Sbjct: 391 KGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP-NAYTYSSLMKGFFKTGLCE 449
Query: 523 DARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDH 582
+A + ++ M+ N Y LI+G + +M+W+ + GIK D
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKML-------TIGIKPDT 502
Query: 583 NLVDAFLYAMVKGGFFDAAMQVVEKSHEM 611
+ + + G DAA+++ HEM
Sbjct: 503 VAYSSIIKGLCGIGSMDAALKLY---HEM 528
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 144/342 (42%), Gaps = 18/342 (5%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 273
PD ++G C E E + +A ++ M + G P + + L KG ++ +
Sbjct: 220 PDGYTYCTLMDGLCKE-ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTK 278
Query: 274 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 333
L M GC +V Y+ LI G G L S + R +S + + G +V
Sbjct: 279 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338
Query: 334 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNAL 393
K+ ++ L+++ E + I +++ G +++A S+ +M
Sbjct: 339 KQRRATDAVRLLSSM-------EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK 391
Query: 394 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSA 453
G + VY ++ C+E + EA ++ + +SG + TY +L++ + + A
Sbjct: 392 GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451
Query: 454 FSLFRDMREARVPDLKGSYLTIMTGLMENHR-PELMAAFLDEV-VGDPRIEVGTHDWNSI 511
++++M + K Y ++ GL R E M + + +G I+ T ++SI
Sbjct: 452 VQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG---IKPDTVAYSSI 508
Query: 512 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQ----TYLSLING 549
I C G ++ A + + M Q EP Q TY L++G
Sbjct: 509 IKGLCGIGSMDAALKLYHEM-LCQEEPKSQPDVVTYNILLDG 549
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 1/196 (0%)
Query: 360 IKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEAT 419
I+ D I G++ + + +A ++ M A G V + Y ++ CK+ + EA
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 420 ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL 479
+ +++ L+ DV TY L+ Q+F+ + +M R + + +++ GL
Sbjct: 283 GIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGL 342
Query: 480 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 539
+ + E + VV D + +N++I + CK + +A F RM + PN
Sbjct: 343 RKRGKIEEALNLVKRVV-DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 540 DQTYLSLINGYVSAEK 555
D TY LI+ + K
Sbjct: 402 DVTYSILIDMFCRRGK 417
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 172/442 (38%), Gaps = 68/442 (15%)
Query: 205 LDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAV 264
+++KLE P V + + G C + + A R+ M+ G+ P TF L
Sbjct: 464 INKKLE---PTVVTYTSLMGGYCSK-GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 265 KGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNF 324
GL +L M E+ +V Y+ +I GY + G++ S L+ ++++
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM-SKAFEFLKEMTEKG------ 572
Query: 325 GGETFCAVVKEYLRKGNIKGLANLINEAQK-------LEPSNIKADNSIGYGIVNACVSM 377
V Y + I GL L +A + L N + + G+++
Sbjct: 573 ------IVPDTYSYRPLIHGLC-LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 378 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 437
G ++A S+ EM G + L Y ++ K L+ E+ GL+ D Y
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Query: 438 DALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMEN---HRPELMAA--- 490
++I+ + DF+ AF ++ M E VP+ + +Y ++ GL + + E++ +
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPN-EVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 491 -------------FLD-----EVVGDPRIEV----------GTHDWNSIIHAFCKAGRLE 522
FLD EV +E+ T +N +I FC+ GR+E
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIE 804
Query: 523 DARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDH 582
+A RM P+ TY ++IN + LWN + KGI+ D
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT-------EKGIRPDR 857
Query: 583 NLVDAFLYAMVKGGFFDAAMQV 604
+ ++ G A ++
Sbjct: 858 VAYNTLIHGCCVAGEMGKATEL 879
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 144/357 (40%), Gaps = 46/357 (12%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTF-GFLGYLYAVKGLQEKIN 272
P+V +A L G + A + M ++G+RPD + G + L +K L +
Sbjct: 190 PEVRTLSALLHGLV-KFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLS-RAK 247
Query: 273 ELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAV 332
E+ M GC V Y+ LI G K + E+ ++ D KD T+C +
Sbjct: 248 EMIAHMEATGCDVNIVPYNVLIDGLCKKQKV--WEAVGIKK--DLAGKDLKPDVVTYCTL 303
Query: 333 VKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNA 392
V GL + Q+ E +GL ++DEM
Sbjct: 304 VY---------GLC----KVQEFE--------------------IGLE-----MMDEMLC 325
Query: 393 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 452
L S +++ K + EA LV + G+ ++ Y+ALI++ + F
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385
Query: 453 AFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSII 512
A LF M + + +Y ++ + + +FL E+V D +++ + +NS+I
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV-DTGLKLSVYPYNSLI 444
Query: 513 HAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 569
+ CK G + A M + EP TY SL+ GY S K L L++++ K
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 148/370 (40%), Gaps = 24/370 (6%)
Query: 178 NVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAE 237
++L+++ + G L L E L K V N+ + G C + ++ AE
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGL-------KLSVYPYNSLINGHC-KFGDISAAE 457
Query: 238 RVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGY 297
+ M N + P +T+ L Y KG K L M G + ++ L+SG
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 298 VKSGNLASMESTILRSLSDEDRKDWNFGGE--TFCAVVKEYLRKGNIKGLANLINEAQKL 355
++G + + +WN T+ +++ Y +G++ + E +
Sbjct: 518 FRAGLIRDAVKLF------NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE---M 568
Query: 356 EPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRT 415
I D +++ G + +A +D ++ + Y +L +C+E +
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 416 AEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTI 475
EA + E+ G+ LD+ Y LI+ S+ +D + F L ++M + + Y ++
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688
Query: 476 MTGLMENHRPELMAAFLDEVVGDPRI--EVGTHDWNSIIHAFCKAGRLEDARRTFRRMNF 533
+ + + D ++ + + EV + ++I+ CKAG + +A +M
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEV---TYTAVINGLCKAGFVNEAEVLCSKMQP 745
Query: 534 LQFEPNDQTY 543
+ PN TY
Sbjct: 746 VSSVPNQVTY 755
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 163/394 (41%), Gaps = 61/394 (15%)
Query: 216 VAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELE 275
+ +CN L+G ++ + A R++ + + G P+ +TF L + +G ++ +L
Sbjct: 252 IVSCNKVLKGL--SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLF 309
Query: 276 VLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 335
+M + G + YS LI GY K+G L ++L + D F + +
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV----VVFSSTIDV 365
Query: 336 YLRKGN--------------------------IKGLAN--LINEA---------QKLEPS 358
Y++ G+ IKGL I EA + +EPS
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 359 NIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEA 418
+ + +++ G ++ ++M +G + +Y ++ K+ A
Sbjct: 426 IVTYSS-----LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 419 TILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIM- 476
+++ ++L+V +++LI+ F A +FR M + PD+ ++ T+M
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV-ATFTTVMR 539
Query: 477 TGLMEN----HRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMN 532
+ME+ H + L +++ +I N +IH K R+EDA + F +
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Query: 533 FLQFEPNDQTYLSLINGYVS------AEKHFNVL 560
+ EP+ TY ++I GY S AE+ F +L
Sbjct: 600 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 633
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 191/488 (39%), Gaps = 70/488 (14%)
Query: 63 QVSTLQTTLHKSLITSDTDEAWKSFKSLTSHQAFPPKPLTNS-LITHLSSLGDIHNLKRA 121
V +T+ + + D A +K + Q P +T + LI L G I+ A
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLC-QGISPNVVTYTILIKGLCQDGRIY---EA 410
Query: 122 FASAVFLMERN--PMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNV 179
F +++R P ++ T +++D FAL M K Y ++G V
Sbjct: 411 FGMYGQILKRGMEPSIV---TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG-V 466
Query: 180 LVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERV 239
LV+ + K G + + R ++ + ++ +V N+ ++G C L +A +V
Sbjct: 467 LVDGLSKQG-------LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC-RLNRFDEALKV 518
Query: 240 VGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVK 299
M G++PD TF + + ++ F C +
Sbjct: 519 FRLMGIYGIKPDVATF-------------TTVMRVSIMEDAF-CKH-------------- 550
Query: 300 SGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGN-IKGLANLINE--AQKLE 356
M+ TI L D +++ C VV L K + I+ + N K+E
Sbjct: 551 ------MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 604
Query: 357 PSNIKADNSI-GYGIVNACVSMGLSDKAHSILD--EMNALG-GSVGLGVYIPILKAYCKE 412
P + + I GY S+ D+A I + ++ G +V L + I +L CK
Sbjct: 605 PDIVTYNTMICGY------CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL---CKN 655
Query: 413 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY 472
N A + ++ G + + TY L++ S D + +F LF +M+E + SY
Sbjct: 656 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 715
Query: 473 LTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMN 532
I+ GL + R + + + D ++ + +I +CK GRL +A + M
Sbjct: 716 SIIIDGLCKRGRVDEATNIFHQAI-DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHML 774
Query: 533 FLQFEPND 540
+P+D
Sbjct: 775 RNGVKPDD 782
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/403 (20%), Positives = 157/403 (38%), Gaps = 25/403 (6%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 273
PD+ C + G C L A +++ + G PD +T+ + Y G +IN
Sbjct: 135 PDIIPCTTLIRGFC-RLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG---EINN 190
Query: 274 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 333
++ S V Y+ ++ SG L + R L ++D T+ ++
Sbjct: 191 ALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML----QRDCYPDVITYTILI 246
Query: 334 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNAL 393
+ R + L++E + D +VN G D+A L++M +
Sbjct: 247 EATCRDSGVGHAMKLLDE---MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 394 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSA 453
G + + IL++ C R +A L+ ++ G V T++ LI A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 454 FSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGTHDWNS 510
+ M + SY ++ G + + + +L+ +V P I +N+
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT----YNT 419
Query: 511 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKL 570
++ A CK G++EDA +++ P TY ++I+G A K + L ++++
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR--- 476
Query: 571 SSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKI 613
K +K D + + + + G D A++ + M I
Sbjct: 477 ----AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 159/411 (38%), Gaps = 71/411 (17%)
Query: 171 VPFAMWGNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCEL 230
VP + NV++ K+G + L V + R+++ PDV N L C +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLD---RMSVS-------PDVVTYNTILRSLC-DS 217
Query: 231 ESVTDAERVVGTMSNLGVRPDELTFGFL--------GYLYAVKGLQEKINELEVLMGEFG 282
+ A V+ M PD +T+ L G +A+K L E M + G
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDE--------MRDRG 269
Query: 283 CSNKKVFYSNLISGYVKSGNL-------ASMEST-----------ILRSLSDEDRKDWNF 324
C+ V Y+ L++G K G L M S+ ILRS+ R W
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR--W-M 326
Query: 325 GGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAH 384
E A + LRKG PS + + ++N GL +A
Sbjct: 327 DAEKLLA---DMLRKG--------------FSPSVVTFNI-----LINFLCRKGLLGRAI 364
Query: 385 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 444
IL++M G Y P+L +CKE + A + + S G D+ TY+ ++
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 445 MSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVG 504
+ A + + + +Y T++ GL + + LDE+ ++
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD-LKPD 483
Query: 505 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 555
T ++S++ + G++++A + F + PN T+ S++ G + +
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 158/396 (39%), Gaps = 53/396 (13%)
Query: 249 RPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMES 308
+P+E + + L +GL +K E+ M G S Y+ LI+ Y ++G
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRY----E 193
Query: 309 TILRSLSDEDRKDWNFGGETFCAVVKEYLRKG-NIKGLANLINEAQKLEPSNIKADNSIG 367
T L L + + T+ V+ R G + +GL L E + I+ D
Sbjct: 194 TSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAE---MRHEGIQPDIVTY 250
Query: 368 YGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISS 427
+++AC GL D+A + MN G L Y +++ + K R + L+ E++S
Sbjct: 251 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 310
Query: 428 SGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA--------------------RVPD 467
G D+ +Y+ L+E S + A +F M+ A R D
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 468 LKGSYLTIMTG-----------LME-----NHRPELMAAFLDEVVGDPRIEVGTHDWNSI 511
++ +L + + L+E + E++ F D V + IE + I
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV--EENIEPDMETYEGI 428
Query: 512 IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLS 571
I A K G EDAR+ + M P+ + Y +I + A + L+ +N + S
Sbjct: 429 IFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGS 488
Query: 572 SDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEK 607
+ I+ H+L LY+ +GG + ++ +
Sbjct: 489 ---NPSIETFHSL----LYSFARGGLVKESEAILSR 517
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 91/476 (19%), Positives = 179/476 (37%), Gaps = 60/476 (12%)
Query: 166 KNRYFVPFAMWGNVLVEIIRKSG-NLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALE 224
KN P + N ++ + G + L +F E + E ++PD+ N L
Sbjct: 203 KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM-------RHEGIQPDIVTYNTLLS 255
Query: 225 GCCCELESVTD-AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGC 283
C + + D AE V TM++ G+ PD T+ L + EK+ +L M G
Sbjct: 256 ACA--IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS 313
Query: 284 SNKKVFYSNLISGYVKSGNL------------------ASMESTILRSLSDEDRKD---- 321
Y+ L+ Y KSG++ A+ S +L R D
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 322 ---------WNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVN 372
+ T+ +++ + G K + L ++ + NI+ D GI+
Sbjct: 374 LFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD---MVEENIEPDMETYEGIIF 430
Query: 373 ACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQL 432
AC GL + A IL M A Y +++A+ + EA + + G
Sbjct: 431 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 490
Query: 433 DVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHR-PELMAAF 491
+ET+ +L+ + + + ++ + ++ +P + ++ + + + E + +
Sbjct: 491 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 550
Query: 492 LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV 551
+D + R + +++ + A +++ R F M P+ Y ++ Y
Sbjct: 551 VD--MEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYG 608
Query: 552 SAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGF-FDAAMQVVE 606
E+ W+DV L + H ++ M+KG + D+ Q+VE
Sbjct: 609 KTER-------WDDVNELLEEMLSNRVSNIHQVIG----QMIKGDYDDDSNWQIVE 653
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 6/211 (2%)
Query: 370 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
++N + G +AHSI + + G L Y ++ A ++ L+ ++ +G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 489
L+ D ++A+I S S + A +F M+E+ ++ T++ G + + E +
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 490 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 549
LD ++ D ++ N ++ A+C ++E+A +M +P+ T+ +L
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 550 YV------SAEKHFNVLMLWNDVKRKLSSDG 574
Y +AE ML N VK + + G
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCG 535
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 151/379 (39%), Gaps = 54/379 (14%)
Query: 247 GVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASM 306
G++PD + F + + G ++ ++ M E GC ++ LI GY K G L
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 307 ESTILRSLSDE-----DR----------------KDWN-------FGGE----TFCAVVK 334
+ L DE DR + WN +G + TF + K
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 335 EYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALG 394
Y R G+ ++I ++ + +K + IVN G ++A M LG
Sbjct: 504 AYARIGSTCTAEDMI--IPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG 561
Query: 395 GSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAF 454
L V+ ++K + N +V + G++ DV T+ L+ S D +
Sbjct: 562 VHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCE 621
Query: 455 SLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVG---DPRIEVGTHDWNS 510
++ DM E + PD+ ++ + G PE L+++ P + + T
Sbjct: 622 EIYTDMLEGGIDPDIH-AFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQ---- 676
Query: 511 IIHAFCKAGRLEDARRTFRRM-NFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 569
II +C AG ++ A + +++M + PN TY +LI G+ A++ + L D++ K
Sbjct: 677 IISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 736
Query: 570 ----------LSSDGHKGI 578
L +DG K I
Sbjct: 737 NVVPTRKTMQLIADGWKSI 755
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 20/269 (7%)
Query: 291 SNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLIN 350
+ L++G ++ G S I +L +E K T+ +V R+ + L +LI+
Sbjct: 323 TKLMNGLIERGRPQEAHS-IFNTLIEEGHKPSLI---TYTTLVTALTRQKHFHSLLSLIS 378
Query: 351 EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC 410
K+E + +K D + I+NA G D+A I ++M G + ++K Y
Sbjct: 379 ---KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG 435
Query: 411 KENRTAEAT-ILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDL 468
K + E++ +L M + LQ + T + L++ + + + A+++ M+ V PD+
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 469 KGSYLTIMTGLMENHRPELMAAFLDEVVGDPR-----IEVGTHDWNSIIHAFCKAGRLED 523
+T T R D ++ PR ++ +I++ +C+ G++E+
Sbjct: 496 ----VTFNTLAKAYARIGSTCTAEDMII--PRMLHNKVKPNVRTCGTIVNGYCEEGKMEE 549
Query: 524 ARRTFRRMNFLQFEPNDQTYLSLINGYVS 552
A R F RM L PN + SLI G+++
Sbjct: 550 ALRFFYRMKELGVHPNLFVFNSLIKGFLN 578
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 159/384 (41%), Gaps = 22/384 (5%)
Query: 213 KPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKIN 272
K D AA NA C A+++ M + G P E F L ++A ++
Sbjct: 155 KHDFAAYNA-FAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVY 213
Query: 273 ELEVLMGEFGCSNKKVFYSNLISGYVKSG----NLASMESTILRSLSDEDRKDWNFGGET 328
+ M +FG + Y+ ++ VK+G LA E L +E T
Sbjct: 214 YVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEE--------STT 265
Query: 329 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 388
F +VK + G I+ + ++ Q++ + K D ++ VS G D + + D
Sbjct: 266 FMILVKGLCKAGRIEEMLEIL---QRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWD 322
Query: 389 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 448
EM + Y ++ CK+ R L ME+ + +D E Y LIE ++
Sbjct: 323 EMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADG 382
Query: 449 DFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDW 508
+SA +L+ D+ ++ G Y ++ GL ++ + A L +V + +E
Sbjct: 383 KVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVD-KAYKLFQVAIEEELEPDFETL 441
Query: 509 NSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKR 568
+ I+ A+ RL D R+ L + +D YL+ + A++ N + L DV
Sbjct: 442 SPIMVAYVVMNRLSDFSNVLERIGELGYPVSD--YLTQFFKLLCADEEKNAMAL--DVFY 497
Query: 569 KLSSDGHKGIKFDHNLVDAFLYAM 592
L + GH + + L++A LY M
Sbjct: 498 ILKTKGHGSVSVYNILMEA-LYKM 520
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 119/279 (42%), Gaps = 23/279 (8%)
Query: 370 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
++N VS D A + + M + + Y ++K YCK +T +A + ++ + G
Sbjct: 228 LMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 287
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM-ENHRPELM 488
+ D TY +I+ + DF S +L+++M E + ++ ++ GL E E
Sbjct: 288 HEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGY 347
Query: 489 AAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 548
F + + + V + +I + K+G +EDA R RM F+P+ TY ++N
Sbjct: 348 TVFENMIRKGSKPNVAI--YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 405
Query: 549 GYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMV-----KGGFFDAAMQ 603
G L + + + + D +FD +++ Y+ + K G D A +
Sbjct: 406 G------------LCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAER 453
Query: 604 VVEKSHEMKIFVDKWRYK---QAFMETHKKLKVAKLRKR 639
+ E+ E D + Y AF + K + L KR
Sbjct: 454 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKR 492
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 127/318 (39%), Gaps = 53/318 (16%)
Query: 210 EFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGY-LYAVKGLQ 268
EF KPD N + GC + DA ++ M V+P +TFG L + L ++
Sbjct: 146 EFGKPDACTYNILIHGCS-QSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVK 204
Query: 269 EKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGET 328
E + ++ +G Y++LI + G L +
Sbjct: 205 EALKMKHDMLKVYGVRPTVHIYASLIKALCQIGEL------------------------S 240
Query: 329 FCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD 388
F +K+ +G IK D +I ++++ + G S++ IL+
Sbjct: 241 FAFKLKDEAYEGKIK------------------VDAAIYSTLISSLIKAGRSNEVSMILE 282
Query: 389 EMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQ 448
EM+ G Y ++ +C EN + A ++ E+ GL+ DV +Y+ ++ +
Sbjct: 283 EMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIK 342
Query: 449 DFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV---GDPRIEVG 504
++ A LF DM R PD SY + GL E + E A LDE++ PR
Sbjct: 343 KWEEATYLFEDMPRRGCSPDTL-SYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPR---- 397
Query: 505 THDWNSIIHAFCKAGRLE 522
+ C++G+LE
Sbjct: 398 RDRLEGFLQKLCESGKLE 415
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 147/364 (40%), Gaps = 40/364 (10%)
Query: 212 MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKI 271
+ PDV + GCC + +DA ++ M G PD + + L A GL ++
Sbjct: 427 IAPDVINYTTLIGGCCLQ-GKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEA 485
Query: 272 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCA 331
E +M G V ++ +I G + +G L E+ SL + R++ + FCA
Sbjct: 486 FETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEA-FYESLEHKSRENDASMVKGFCA 544
Query: 332 VVKEYLRKGNIKGLANLINEA-QKLEPSNIKADNSIGYGIVNA-CVSMGLSDKAHSILDE 389
A ++ A ++ S+ + + + C KA +LD
Sbjct: 545 --------------AGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDR 590
Query: 390 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 449
M LG +Y ++ A+C+ N +A + + + D+ TY +I T +
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNE 650
Query: 450 FQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPEL-----MAAFLDEVVGDPRIEV 503
+ A++LF DM+ V PD+ + ++ N PEL M AF +V+ D
Sbjct: 651 PKQAYALFEDMKRRDVKPDV------VTYSVLLNSDPELDMKREMEAF--DVIPD----- 697
Query: 504 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 563
+ +I+ +C L+ F+ M + P+ TY L+ E++ + M
Sbjct: 698 -VVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN--KPERNLSREMKA 754
Query: 564 NDVK 567
DVK
Sbjct: 755 FDVK 758
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 131/326 (40%), Gaps = 55/326 (16%)
Query: 233 VTDAERVVGTMSNLGVRPDELTFG-FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYS 291
V A V+ M G+ PDE FG L L ++E E + +F + + +++
Sbjct: 183 VKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLR--YFT 240
Query: 292 NLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE 351
+L+ G+ + G L + +++ +KE + +I NL++
Sbjct: 241 SLLYGWCREGKLMEAKEVLVQ--------------------MKEAGLEPDIVVFTNLLS- 279
Query: 352 AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 411
GY G A+ ++++M G + Y +++A C+
Sbjct: 280 ---------------GYA------HAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCR 318
Query: 412 -ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 470
E R EA + +E+ G + D+ TY ALI +S+ DMR+ V +
Sbjct: 319 TEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQV 378
Query: 471 SYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD----WNSIIHAFCKAGRLEDARR 526
+Y+ IM + + E ++++ G H +N +I CK G +++A R
Sbjct: 379 TYMQIMVAHEKKEQFEECLELIEKMK-----RRGCHPDLLIYNVVIRLACKLGEVKEAVR 433
Query: 527 TFRRMNFLQFEPNDQTYLSLINGYVS 552
+ M P T++ +ING+ S
Sbjct: 434 LWNEMEANGLSPGVDTFVIMINGFTS 459
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 107/519 (20%), Positives = 201/519 (38%), Gaps = 70/519 (13%)
Query: 82 EAWKSFKSLTSHQAFPPK---PLTNS--------LITHLSSLGDIHNLKRAFASAVFLME 130
E K ++ L +H + PK L S +I LS GD NL F
Sbjct: 66 EVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRF---FLWAT 122
Query: 131 RNPMVLES-ETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGN 189
+ P S E +M+ + + L+ M K P + + V ++R+ +
Sbjct: 123 KQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTN---PELIEPELFVVLMRRFAS 179
Query: 190 LAAFLPVFEESCRVALDEKLEF-MKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGV 248
E LDE ++ ++PD L+ C + SV +A +V M
Sbjct: 180 ANMVKKAVE-----VLDEMPKYGLEPDEYVFGCLLDALC-KNGSVKEASKVFEDMRE-KF 232
Query: 249 RPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMES 308
P+ F L Y + +G + E+ V M E G V ++NL+SGY +G +A
Sbjct: 233 PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYD 292
Query: 309 TILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY 368
++D ++ + + +++ R K + + ++E +AD
Sbjct: 293 L----MNDMRKRGFEPNVNCYTVLIQALCRTE--KRMDEAMRVFVEMERYGCEADIVTYT 346
Query: 369 GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS 428
+++ G+ DK +S+LD+M G Y+ I+ A+ K+ + E L+ ++
Sbjct: 347 ALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR 406
Query: 429 GLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTG------LME- 481
G D+ Y+ +I + + + A L+ +M + +++ ++ G L+E
Sbjct: 407 GCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEA 466
Query: 482 -NHRPELMA-------------AFLDEVVGDPRIEVGTHDWNSI---------------- 511
NH E+++ + L+ +V D ++E+ W+ I
Sbjct: 467 CNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTI 526
Query: 512 -IHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 549
IHA G +++A M + P TY L+ G
Sbjct: 527 WIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKG 565
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 14/248 (5%)
Query: 327 ETFCAVVKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAH 384
E F +++ + +K +++E K LEP D + +++A G +A
Sbjct: 168 ELFVVLMRRFASANMVKKAVEVLDEMPKYGLEP-----DEYVFGCLLDALCKNGSVKEAS 222
Query: 385 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 444
+ ++M L + +L +C+E + EA +++++ +GL+ D+ + L+
Sbjct: 223 KVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
Query: 445 MSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGL--MENHRPELMAAFLD-EVVGDPRI 501
+ A+ L DMR+ Y ++ L E E M F++ E G
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYG---C 338
Query: 502 EVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLM 561
E + ++I FCK G ++ M P+ TY+ ++ + E+ L
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398
Query: 562 LWNDVKRK 569
L +KR+
Sbjct: 399 LIEKMKRR 406
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 18/235 (7%)
Query: 401 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 460
+++ +++ + N +A ++ E+ GL+ D + L++ + + A +F DM
Sbjct: 169 LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM 228
Query: 461 REARVPDLKGSYLTIMTGLMENHRPELMAA-----FLDEVVGDPRIEVGTHDWNSIIHAF 515
RE P+L+ + +++ G + LM A + E +P I V T+ ++ +
Sbjct: 229 REKFPPNLR-YFTSLLYGWCREGK--LMEAKEVLVQMKEAGLEPDIVVFTN----LLSGY 281
Query: 516 CKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGH 575
AG++ DA M FEPN Y LI EK + M R
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAM------RVFVEMER 335
Query: 576 KGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKK 630
G + D A + K G D V++ + + + Y Q + KK
Sbjct: 336 YGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKK 390
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 116/556 (20%), Positives = 198/556 (35%), Gaps = 99/556 (17%)
Query: 67 LQTTLHKSLITSDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNL------KR 120
+ +H + D A+K K + P + N LI + D N ++
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 121 AFASAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVL 180
A++ M +VL + + + A AF+++R M + + + VL
Sbjct: 435 AYSE----MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 490
Query: 181 VEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAA-CNAALEGCCCELESVTDAERV 239
+ S AFL +FEE R L + V + C A L + A +
Sbjct: 491 NYLCNASKMELAFL-LFEEMKRGGLVADVYTYTIMVDSFCKAGL---------IEQARKW 540
Query: 240 VGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVK 299
M +G P+ +T+ L + Y NEL M GC V YS LI G+ K
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 300 SGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSN 359
+G + R +D D V Y ++ + N
Sbjct: 601 AGQVEKACQIFERMCGSKDVPD-----------VDMYFKQYD----------------DN 633
Query: 360 IKADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEA 418
+ N + YG +++ ++A +LD M+ G VY ++ CK + EA
Sbjct: 634 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
Query: 419 TILVMEISSSGLQLDVETYDALIET--SMSSQDFQSAFSLFRDMREARVPDLKGSYLTIM 476
+ E+S G + TY +LI+ + QD S ++
Sbjct: 694 QEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK---------------------VL 732
Query: 477 TGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQF 536
+ ++EN P + + + +I CK G+ ++A + + M
Sbjct: 733 SKMLENSCA-------------PNVVI----YTEMIDGLCKVGKTDEAYKLMQMMEEKGC 775
Query: 537 EPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGG 596
+PN TY ++I+G+ K L L L G KG+ ++ + K G
Sbjct: 776 QPNVVTYTAMIDGFGMIGKIETCLEL-------LERMGSKGVAPNYVTYRVLIDHCCKNG 828
Query: 597 FFDAAMQVVEKSHEMK 612
D A ++E EMK
Sbjct: 829 ALDVAHNLLE---EMK 841
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 152/390 (38%), Gaps = 63/390 (16%)
Query: 199 ESCRVALDE-KLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGF 257
E R LD +E +P+ +A ++G C ++ + +A+ V MS G T+
Sbjct: 656 EEARKLLDAMSMEGCEPNQIVYDALIDGLC-KVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 258 LGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE 317
L Y Q+ +++ M E C+ V Y+ +I G K G + E+ L + +E
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK--TDEAYKLMQMMEE 772
Query: 318 DRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGI-VNACVS 376
N T+ A++ + G I+ L+ +++ + A N + Y + ++ C
Sbjct: 773 KGCQPNV--VTYTAMIDGFGMIGKIETCLELL---ERMGSKGV-APNYVTYRVLIDHCCK 826
Query: 377 MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVET 436
G D AH++L+EM Y +++ + KE E+ L+ EI +
Sbjct: 827 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSV 884
Query: 437 YDALIETSMSSQDFQSAFSLFRDMR--EARVPDLKGSYLTIMTGLMENHRPELMAAFLDE 494
Y LI+ + +Q + A L ++ A + D +Y
Sbjct: 885 YRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTY---------------------- 922
Query: 495 VVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAE 554
NS+I + C A ++E A + F M P Q++ SLI G
Sbjct: 923 --------------NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968
Query: 555 KHFNVLML----------WNDVKRKLSSDG 574
K L+L W ++ K +SDG
Sbjct: 969 KISEALLLLDFISHMEIQW--IEEKKTSDG 996
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 147/352 (41%), Gaps = 33/352 (9%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 273
PDV ++G C + V DA ++ M G+ PD +T+ L A G +E++ E
Sbjct: 421 PDVINYTTLIDGYCLQ-GKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLE 479
Query: 274 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMES--TILRSLSDEDRKDWNFGGETFCA 331
+ M G V S +I G + + E + L E++ + G +C
Sbjct: 480 IYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKG---YC- 535
Query: 332 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 391
+ L K K L +K IK S+ C+ G +KAH +L +M+
Sbjct: 536 --EAGLSKKAYKAFVRLEYPLRK--SVYIKLFFSL-------CIE-GYLEKAHDVLKKMS 583
Query: 392 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 451
A G + ++ A+CK N EA +L + GL D+ TY +I T + Q
Sbjct: 584 AYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQ 643
Query: 452 SAFSLFRDMREARV-PDLKGSYLTIMTGLM----ENH-----RPELMAAFLDEVVGD--- 498
A SLF DM++ + PD+ +Y ++ + E+H + E+ EV+ +
Sbjct: 644 KAESLFEDMKQRGIKPDVV-TYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSA 702
Query: 499 PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
I + + +I CK LE A F RM EP+ Y +LI+ Y
Sbjct: 703 AGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSY 754
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 154/387 (39%), Gaps = 37/387 (9%)
Query: 183 IIRKSGNLA---AFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERV 239
+IR SG L L +F+E+ V K D+ ACN + E + +
Sbjct: 145 LIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMT-EFGKIGMLMTL 203
Query: 240 VGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVF-YSNLISGYV 298
+ LG+ +E T+ + VK L K N E M N+ VF Y I+G
Sbjct: 204 FKQLKQLGLCANEYTYAIV-----VKALCRKGNLEEAAM--LLIENESVFGYKTFINGLC 256
Query: 299 KSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPS 358
+G + IL + DRK G+ AV+ +R G N + K S
Sbjct: 257 VTGETEKAVALILELI---DRK--YLAGDDLRAVLGMVVR-----GFCNEMK--MKAAES 304
Query: 359 NIKADNSIGYGI-VNACVS--------MGLSDKAHSILDEMNALGGSVGLGVYIPILKAY 409
I IG+G+ V AC++ M L + A LD+M G V + IL+ Y
Sbjct: 305 VIIEMEEIGFGLDVYACLAVIDRYCKNMNLPE-ALGFLDKMLGKGLKVNCVIVSLILQCY 363
Query: 410 CKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE-ARVPDL 468
CK + EA E + LD Y+ + + AF L ++M++ VPD+
Sbjct: 364 CKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDV 423
Query: 469 KGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTF 528
+Y T++ G + +DE++G+ + +N ++ + G E+ +
Sbjct: 424 I-NYTTLIDGYCLQGKVVDALDLIDEMIGNG-MSPDLITYNVLVSGLARNGHEEEVLEIY 481
Query: 529 RRMNFLQFEPNDQTYLSLINGYVSAEK 555
RM +PN T +I G A K
Sbjct: 482 ERMKAEGPKPNAVTNSVIIEGLCFARK 508
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 174/453 (38%), Gaps = 82/453 (18%)
Query: 243 MSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFY-------SNLIS 295
+ N G P LTF L Y + KG E N +EVL +NK V Y S +IS
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKG--EMDNAIEVLEM---MTNKNVNYPFDNFVCSAVIS 179
Query: 296 GYVKSGN----LASMESTI------------------------LRSLSDEDRKDWNFGGE 327
G+ K G L ES + + + D R+ + G E
Sbjct: 180 GFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFE 239
Query: 328 TFCAVVKEYLRKGNIKG--LANLINEAQKLEPSNIKADNSIGYGI-VNACVSMGLSDKAH 384
C ++ G KG L + + + +++ + D + Y I ++ G ++A
Sbjct: 240 FDCVFYSNWIH-GYFKGGALVDALMQDREMVEKGMNRD-VVSYSILIDGLSKEGNVEEAL 297
Query: 385 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 444
+L +M G L Y I++ CK + EA +L I S G+++D Y LI+
Sbjct: 298 GLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGI 357
Query: 445 MSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD------ 498
+ AFS+ DM + + +Y T++ GL R VVGD
Sbjct: 358 CRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYST 417
Query: 499 ---PRIEVGTHD--------------------WNSIIHAFCKAGRLEDARRTFRRMNFLQ 535
I+V D N ++ AF G +A +R M +
Sbjct: 418 LLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMD 477
Query: 536 FEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKG 595
P+ TY ++I GY + L ++N++++ S + ++ ++D A+ K
Sbjct: 478 LTPDTATYATMIKGYCKTGQIEEALEMFNELRK---SSVSAAVCYNR-IID----ALCKK 529
Query: 596 GFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETH 628
G D A +V+ + E +++D + H
Sbjct: 530 GMLDTATEVLIELWEKGLYLDIHTSRTLLHSIH 562
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 8/176 (4%)
Query: 402 YIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR 461
Y I+ CKE +A L S G+ L+ TY++LI A LF +
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 462 EARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGTHDWNSIIHAFCKA 518
+ + +Y ++ L + LD +V P I + +NSI+ +CK
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIII----YNSIVDGYCKL 773
Query: 519 GRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK-LSSD 573
G+ EDA R R + P+ T S+I GY L ++ + K K +S+D
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 145/358 (40%), Gaps = 44/358 (12%)
Query: 227 CCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNK 286
C + +V +A R + L + P TF L + A E + L+ E G +
Sbjct: 446 CKKQRAVKEAFR----FTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTAD 501
Query: 287 KVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGE----TFCAVVKEYLRKGNI 342
Y+ LIS KSG + +M + +S N G E TF A++ R G +
Sbjct: 502 CKLYTTLISSCAKSGKVDAM-FEVFHQMS-------NSGVEANLHTFGALIDGCARAGQV 553
Query: 343 KGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALG-----GSV 397
A L N+K D + +++AC G D+A +L EM A +
Sbjct: 554 ---AKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHI 610
Query: 398 GLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLF 457
+G ++KA C + A + I G++ E Y + + S D+ A S++
Sbjct: 611 SIGA---LMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIY 667
Query: 458 RDMREARV-PD-LKGSYLTIMTGLMENHRPELMAAFLDEVVG---DPR---IEVGTHDWN 509
+DM+E V PD + S L + G A LDE G D + I +GT ++
Sbjct: 668 KDMKEKDVTPDEVFFSALIDVAG---------HAKMLDEAFGILQDAKSQGIRLGTISYS 718
Query: 510 SIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 567
S++ A C A + A + ++ ++ P T +LI + + +++K
Sbjct: 719 SLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIK 776
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 184/462 (39%), Gaps = 46/462 (9%)
Query: 144 MLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNL------------- 190
+LD++ G N + + R M K F P NVL++ + K+ +
Sbjct: 152 VLDTLLGENRIQMIYMVYRDM-KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 210
Query: 191 ------AAFLPVFEESCRVAL----DEKLEFMKPDVAACNAALEGCCCELESVTDAERVV 240
++ V C V L E E +P V+ NA + G C E A ++
Sbjct: 211 GCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKE-HDYKGAFELM 269
Query: 241 GTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKS 300
M G+ P+ +++ L + G E M + GC S+L+ G
Sbjct: 270 REMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLR 329
Query: 301 GNLASMESTILRSLSDEDRKDWNFGGE----TFCAVVKEYLRKGNIKGLANLINEAQKLE 356
G T +L ++ FG + + +V+ + GNI ++ + +++
Sbjct: 330 G-------TTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 357 PS-NIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRT 415
S NI+ S+ +N G D A I ++M G + VY +++A C+ ++
Sbjct: 383 CSPNIRTYGSL----INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF 438
Query: 416 AEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLT 474
EA L+ +S V T++A I+ + A +FR M ++ R P +Y
Sbjct: 439 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNE 498
Query: 475 IMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFL 534
++ GL + +R E E+ +E + +N+++H C AG A + +M
Sbjct: 499 LLDGLAKANRIEEAYGLTREIFMRG-VEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557
Query: 535 QFEPNDQTYLSLINGYV---SAEKHFNVLMLWNDVKRKLSSD 573
P++ T +I Y AE+ +L L + +RK D
Sbjct: 558 GKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPD 599
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 138/338 (40%), Gaps = 35/338 (10%)
Query: 261 LYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRK 320
+Y GL E+ E+ + EFGC Y++++ + N M + R D R
Sbjct: 120 VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGE-NRIQMIYMVYR---DMKRD 175
Query: 321 DWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKA-DNSIGYG-IVNACVSMG 378
+ T+ ++K + + G L+ +E SN +++ Y ++++ +G
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLL-----VEMSNKGCCPDAVSYTTVISSMCEVG 230
Query: 379 LSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYD 438
L + + + + + VY ++ CKE+ A L+ E+ G+ +V +Y
Sbjct: 231 LVKEGRELAERFEPV-----VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 439 ALIETSMSSQDFQSAFSLFRDM-REARVPDL-------KGSYLTIMTGLMENHRPELMAA 490
LI +S + AFS M + P++ KG +L T + +++
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 491 FLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
F ++ +N+++ FC G + A F M + PN +TY SLING+
Sbjct: 346 F--------GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Query: 551 VSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAF 588
+ +WN + L+S + N+V+A
Sbjct: 398 AKRGSLDGAVYIWN---KMLTSGCCPNVVVYTNMVEAL 432
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 332 VVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEM 390
+VK +K +I+ +++E PS N + Y I+ V+ G + A +L+EM
Sbjct: 197 LVKALCKKNDIESAYKVLDEI----PSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM 252
Query: 391 NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDF 450
G Y ++ YCK R +EA ++ ++ + ++ + TY +I +
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 451 QSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDW- 508
A ++F +M E + +PD ++ L E+H+ +DE G R + +
Sbjct: 313 GEARNMFDEMLERSFMPD-SSLCCKVIDALCEDHK-------VDEACGLWRKMLKNNCMP 364
Query: 509 -----NSIIHAFCKAGRLEDARRTFRRMNFLQFE----PNDQTYLSLINGYVSAEKHFNV 559
+++IH CK GR+ +AR+ F +FE P+ TY +LI G +
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFD-----EFEKGSIPSLLTYNTLIAGMCEKGELTEA 419
Query: 560 LMLWNDV-KRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDK 617
LW+D+ +RK + F +N++ + + K G ++V+E+ E+ F +K
Sbjct: 420 GRLWDDMYERKCKPNA-----FTYNVL---IEGLSKNGNVKEGVRVLEEMLEIGCFPNK 470
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 169/420 (40%), Gaps = 33/420 (7%)
Query: 139 ETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLPVFE 198
+T H++L + A P +L+ + +N Y P N+ ++++R G LA +E
Sbjct: 84 DTYHSILFKLSRARAFDPVESLMADL-RNSY-PPIKCGENLFIDLLRNYG-LAG---RYE 137
Query: 199 ESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL 258
S R+ L +K V + N L + + G+ P+ T L
Sbjct: 138 SSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLL 197
Query: 259 GYLYAVKGLQEKINELE----VL--MGEFGCSNKKVFYSNLISGYVKSGNLASMESTILR 312
VK L +K N++E VL + G V Y+ ++ GYV G++ S + R
Sbjct: 198 -----VKALCKK-NDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK----R 247
Query: 313 SLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGI 370
L + + W T+ ++ Y + G A ++++ +K +EP N + YG+
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEP------NEVTYGV 301
Query: 371 -VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
+ A S +A ++ DEM + ++ A C++++ EA L ++ +
Sbjct: 302 MIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNN 361
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 489
D LI A LF + + +P L +Y T++ G+ E
Sbjct: 362 CMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLL-TYNTLIAGMCEKGELTEAG 420
Query: 490 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 549
D++ + + + +N +I K G +++ R M + PN T+L L G
Sbjct: 421 RLWDDMY-ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEG 479
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 153/383 (39%), Gaps = 25/383 (6%)
Query: 179 VLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAER 238
L+ I K G + L +FEE R P V ++G + V +A
Sbjct: 273 TLLGIYFKVGKVEKALDLFEEMKRAGCS-------PTVYTYTELIKGLG-KAGRVDEAYG 324
Query: 239 VVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFG---CSNKKVFYSNLIS 295
M G+ PD + FL L + G ++ EL + E G C+ V Y+ +I
Sbjct: 325 FYKDMLRDGLTPDVV---FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIK 381
Query: 296 GYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA-QK 354
+S S S+ + + F T+ ++ Y + ++ L+ E +K
Sbjct: 382 ALFESKAHVSEVSSWFDKMKADSVSPSEF---TYSILIDGYCKTNRVEKALLLLEEMDEK 438
Query: 355 LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENR 414
P A S+ +NA + A+ + E+ G+V VY ++K + K +
Sbjct: 439 GFPPCPAAYCSL----INALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 415 TAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLT 474
+EA L E+ + G DV Y+AL+ + + A SL R M E S+
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554
Query: 475 IMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFL 534
I+ G P A + E + I+ +N+++ F AG E+A R R M
Sbjct: 555 ILNGFARTGVPR-RAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK 613
Query: 535 QFEPNDQTYLSLIN--GYVSAEK 555
FE + TY S+++ G V EK
Sbjct: 614 GFEYDAITYSSILDAVGNVDHEK 636
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 148/387 (38%), Gaps = 37/387 (9%)
Query: 236 AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLIS 295
A R+ M + ++P E + L +Y G EK +L M GCS Y+ LI
Sbjct: 252 AIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIK 311
Query: 296 GYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQ-- 353
G K+G + L D D F + K G ++ L N+ +E
Sbjct: 312 GLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK----VGRVEELTNVFSEMGMW 367
Query: 354 KLEPSNIKADNSIGYGIVNACVSMGLSDKAH-----SILDEMNALGGSVGLGVYIPILKA 408
+ P+ + N + KAH S D+M A S Y ++
Sbjct: 368 RCTPTVVS---------YNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDG 418
Query: 409 YCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDL 468
YCK NR +A +L+ E+ G Y +LI ++ +++A LF++++E
Sbjct: 419 YCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVS 478
Query: 469 KGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVGTHDWNSIIHAFCKAGRLEDAR 525
Y ++ + + +E+ P + + +N+++ KAG + +A
Sbjct: 479 SRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDV----YAYNALMSGMVKAGMINEAN 534
Query: 526 RTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLV 585
R+M + ++ ++NG+ + ++ +K H GIK D
Sbjct: 535 SLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIK-------HSGIKPDGVTY 587
Query: 586 DAFLYAMVKGGFFDAAMQVVEKSHEMK 612
+ L G F+ A +++ EMK
Sbjct: 588 NTLLGCFAHAGMFEEAARMM---REMK 611
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 7/242 (2%)
Query: 328 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 387
T+ A++ Y + G L +E ++ + ++ I ++ +G +KA +
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDE---MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 388 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 447
+EM G S + Y ++K K R EA ++ GL DV + L+
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 448 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMEN--HRPELMAAFLDEVVGDPRIEVGT 505
+ ++F +M R SY T++ L E+ H E+ +++ D++ D +
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEV-SSWFDKMKADS-VSPSE 409
Query: 506 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 565
++ +I +CK R+E A M+ F P Y SLIN A+++ L+ +
Sbjct: 410 FTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE 469
Query: 566 VK 567
+K
Sbjct: 470 LK 471
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 154/368 (41%), Gaps = 61/368 (16%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 273
P V + N + G C + S+ +A + M+ GV PD +T+ L + + G+ E
Sbjct: 255 PSVYSHNILINGLCL-VGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWE 313
Query: 274 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 333
+ M + G S + Y+ L+ G + GN+ M +L+ D + + C+V+
Sbjct: 314 VIRDMLDKGLSPDVITYTILLCGQCQLGNI-DMGLVLLK---DMLSRGFELNSIIPCSVM 369
Query: 334 KEYLRK-GNIKGLANLINE--AQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDE 389
L K G I +L N+ A L P + + Y IV + +G D A + DE
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSP------DLVAYSIVIHGLCKLGKFDMALWLYDE 423
Query: 390 M---NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 446
M L S G +L C++ EA L+ + SSG LD+ Y+ +I+
Sbjct: 424 MCDKRILPNSRTHG---ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 447 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 506
S + A LF+ + I TG+ + +A F
Sbjct: 481 SGCIEEALELFK--------------VVIETGITPS-----VATF--------------- 506
Query: 507 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 566
NS+I+ +CK + +AR+ + P+ +Y +L++ Y + ++ +++
Sbjct: 507 --NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI----DEL 560
Query: 567 KRKLSSDG 574
+R++ ++G
Sbjct: 561 RREMKAEG 568
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 155/379 (40%), Gaps = 60/379 (15%)
Query: 229 ELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVL---MGEFGCSN 285
+L + AERV+ +S +G P+ +++ L Y G K N E + M G
Sbjct: 158 KLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGG---KCNNAEAIFRRMQSSGPEP 214
Query: 286 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGL 345
+ Y ++ +V+ E + +L DE + + + ++ Y + GN +
Sbjct: 215 SAITYQIILKTFVEGDKFKEAEE-VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE-- 271
Query: 346 ANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS-ILDEMNALGGSVGLGVYIP 404
+A+K+ S + N+ +S S K S I D+M + Y
Sbjct: 272 -----KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYAL 326
Query: 405 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR 464
++KAY + R EA + E+ +G++ + Y+ L++ S + A ++F+ MR R
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386
Query: 465 V-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 523
+ PDL SY T+++ A+ A +E
Sbjct: 387 IFPDL-WSYTTMLS------------------------------------AYVNASDMEG 409
Query: 524 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN 583
A + F+R+ FEPN TY +LI GY A ++ ++ K +LS GIK +
Sbjct: 410 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE--KMRLS-----GIKANQT 462
Query: 584 LVDAFLYAMVKGGFFDAAM 602
++ + A + F +A+
Sbjct: 463 ILTTIMDASGRCKNFGSAL 481
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 152/372 (40%), Gaps = 60/372 (16%)
Query: 236 AERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVL---MGEFGCSNKKVFYSN 292
AERV+ +S +G P+ +++ L Y G K N E + M G + Y
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGG---KCNNAEAIFRRMQSSGPEPSAITYQI 214
Query: 293 LISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEA 352
++ +V+ E + +L DE + + + ++ Y + GN + +A
Sbjct: 215 ILKTFVEGDKFKEAEE-VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE-------KA 266
Query: 353 QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS-ILDEMNALGGSVGLGVYIPILKAYCK 411
+K+ S + N+ +S S K S I D+M + Y ++KAY +
Sbjct: 267 RKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGR 326
Query: 412 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKG 470
R EA + E+ +G++ + Y+ L++ S + A ++F+ MR R+ PDL
Sbjct: 327 ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL-W 385
Query: 471 SYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRR 530
SY T+++ A+ A +E A + F+R
Sbjct: 386 SYTTMLS------------------------------------AYVNASDMEGAEKFFKR 409
Query: 531 MNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLY 590
+ FEPN TY +LI GY A ++ ++ K +LS GIK + ++ +
Sbjct: 410 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE--KMRLS-----GIKANQTILTTIMD 462
Query: 591 AMVKGGFFDAAM 602
A + F +A+
Sbjct: 463 ASGRCKNFGSAL 474
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 154/385 (40%), Gaps = 36/385 (9%)
Query: 246 LGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS 305
L +R T+ L GL + ++ M G S L+S + + G L
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 306 MESTILRSLSDEDRKDWNFGGETFCAVVKEYL----RKGNIKGLANLINEAQKLEPSNIK 361
+ +L+S F E C VV L + ++ L +E + + N
Sbjct: 157 ATALLLQS----------FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-- 204
Query: 362 ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATIL 421
D ++ +G ++KA +L M+ G + Y +++ +CK N +A+ +
Sbjct: 205 -DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 422 VMEI-SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 480
++ S S DV TY ++I + + A SL DM + ++ ++ G
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 481 ENHRPELMAAFLDEVVGDPRIEVGTH----DWNSIIHAFCKAGRLEDARRTFRRMNFLQF 536
+ E++ A +E+ G I G + S+I +C+ G++ R + MN
Sbjct: 324 K--AGEMLTA--EEIRGK-MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 537 EPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN-LVDAFLYAMVKG 595
PN TY LIN + N L+ ++ +L+S F +N ++D F K
Sbjct: 379 FPNAFTYSILINALCNE----NRLLKARELLGQLASKDIIPQPFMYNPVIDGF----CKA 430
Query: 596 GFFDAAMQVVEKSHEMKIFVDKWRY 620
G + A +VE+ + K DK +
Sbjct: 431 GKVNEANVIVEEMEKKKCKPDKITF 455
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 112/280 (40%), Gaps = 18/280 (6%)
Query: 205 LDEKLEFMKP-DVAACNAALEGCCCELESVTDAER---VVGTMSNLGVRPDELTFGFLGY 260
DE L F D N + G C V AE+ ++G MS G PD +T+ L
Sbjct: 194 FDEHLRFQSCNDTKTFNILIRGLC----GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQ 249
Query: 261 LYAVKGLQEKINEL--EVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDED 318
+ K +E+ +V G CS V Y+++ISGY K+G + S L D
Sbjct: 250 GFCKSNELNKASEMFKDVKSGSV-CSPDVVTYTSMISGYCKAGKMREASSL----LDDML 304
Query: 319 RKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMG 378
R TF +V Y + G + + K+ D +++ +G
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEI---RGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 379 LSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYD 438
+ + +EMNA G Y ++ A C ENR +A L+ +++S + Y+
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 439 ALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTG 478
+I+ + A + +M + + K ++ ++ G
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 154/385 (40%), Gaps = 36/385 (9%)
Query: 246 LGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS 305
L +R T+ L GL + ++ M G S L+S + + G L
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 306 MESTILRSLSDEDRKDWNFGGETFCAVVKEYL----RKGNIKGLANLINEAQKLEPSNIK 361
+ +L+S F E C VV L + ++ L +E + + N
Sbjct: 157 ATALLLQS----------FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-- 204
Query: 362 ADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATIL 421
D ++ +G ++KA +L M+ G + Y +++ +CK N +A+ +
Sbjct: 205 -DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 422 VMEI-SSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM 480
++ S S DV TY ++I + + A SL DM + ++ ++ G
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 481 ENHRPELMAAFLDEVVGDPRIEVGTH----DWNSIIHAFCKAGRLEDARRTFRRMNFLQF 536
+ E++ A +E+ G I G + S+I +C+ G++ R + MN
Sbjct: 324 K--AGEMLTA--EEIRGK-MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 537 EPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN-LVDAFLYAMVKG 595
PN TY LIN + N L+ ++ +L+S F +N ++D F K
Sbjct: 379 FPNAFTYSILINALCNE----NRLLKARELLGQLASKDIIPQPFMYNPVIDGF----CKA 430
Query: 596 GFFDAAMQVVEKSHEMKIFVDKWRY 620
G + A +VE+ + K DK +
Sbjct: 431 GKVNEANVIVEEMEKKKCKPDKITF 455
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 112/280 (40%), Gaps = 18/280 (6%)
Query: 205 LDEKLEFMKP-DVAACNAALEGCCCELESVTDAER---VVGTMSNLGVRPDELTFGFLGY 260
DE L F D N + G C V AE+ ++G MS G PD +T+ L
Sbjct: 194 FDEHLRFQSCNDTKTFNILIRGLC----GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQ 249
Query: 261 LYAVKGLQEKINEL--EVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDED 318
+ K +E+ +V G CS V Y+++ISGY K+G + S L D
Sbjct: 250 GFCKSNELNKASEMFKDVKSGSV-CSPDVVTYTSMISGYCKAGKMREASSL----LDDML 304
Query: 319 RKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMG 378
R TF +V Y + G + + K+ D +++ +G
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEI---RGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 379 LSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYD 438
+ + +EMNA G Y ++ A C ENR +A L+ +++S + Y+
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 439 ALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTG 478
+I+ + A + +M + + K ++ ++ G
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 154/368 (41%), Gaps = 61/368 (16%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 273
P V + N + G C + S+ +A + M+ GV PD +T+ L + + G+ E
Sbjct: 255 PSVYSHNILINGLCL-VGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWE 313
Query: 274 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 333
+ M + G S + Y+ L+ G + GN+ M +L+ D + + C+V+
Sbjct: 314 VIRDMLDKGLSPDVITYTILLCGQCQLGNI-DMGLVLLK---DMLSRGFELNSIIPCSVM 369
Query: 334 KEYLRK-GNIKGLANLINE--AQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDE 389
L K G I +L N+ A L P + + Y IV + +G D A + DE
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSP------DLVAYSIVIHGLCKLGKFDMALWLYDE 423
Query: 390 M---NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMS 446
M L S G +L C++ EA L+ + SSG LD+ Y+ +I+
Sbjct: 424 MCDKRILPNSRTHG---ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 447 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 506
S + A LF+ + I TG+ + +A F
Sbjct: 481 SGCIEEALELFK--------------VVIETGITPS-----VATF--------------- 506
Query: 507 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 566
NS+I+ +CK + +AR+ + P+ +Y +L++ Y + ++ +++
Sbjct: 507 --NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI----DEL 560
Query: 567 KRKLSSDG 574
+R++ ++G
Sbjct: 561 RREMKAEG 568
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 177/441 (40%), Gaps = 74/441 (16%)
Query: 178 NVLVEIIRKSGNLAAFLPVFEESCRVALDEKLE-FMKPDVAACNAALEGCCCELESVTDA 236
N L+ ++ K G++ + C LD+ ++ + P++ N ++G C + + A
Sbjct: 220 NKLLRVLCKKGDV--------KECEKLLDKVIKRGVLPNLFTYNLFIQGLC-QRGELDGA 270
Query: 237 ERVVGTMSNLGVRPDELTFGFLGYLYAVKGL--QEKINELEVLMGEF---GCSNKKVFYS 291
R+VG + G +PD +T+ L Y GL K E EV +G+ G Y+
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIY-----GLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 292 NLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE 351
LI+GY K G + E R + D + T+ +++ +G L NE
Sbjct: 326 TLIAGYCKGGMVQLAE----RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 352 A--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAY 409
A + ++P N+ N++ G+ N G+ +A + +EM+ G + + ++
Sbjct: 382 ALGKGIKP-NVILYNTLIKGLSNQ----GMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436
Query: 410 CKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLK 469
CK ++A LV + S G D+ T++ LI + ++A
Sbjct: 437 CKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL--------------- 481
Query: 470 GSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFR 529
E++ LD V DP + + +NS+++ CK + ED T++
Sbjct: 482 ----------------EILDVMLDNGV-DPDV----YTYNSLLNGLCKTSKFEDVMETYK 520
Query: 530 RMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFL 589
M PN T+ L+ K L L ++K K S + F L+D F
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK--SVNPDAVTFG-TLIDGF- 576
Query: 590 YAMVKGGFFDAAMQVVEKSHE 610
K G D A + K E
Sbjct: 577 ---CKNGDLDGAYTLFRKMEE 594
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 150/356 (42%), Gaps = 29/356 (8%)
Query: 262 YAVKG-LQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE--- 317
Y KG +QE +N E M + C Y+ ++S V SG +R + D
Sbjct: 86 YGRKGKVQEAVNVFE-RMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR-MRDRGIT 143
Query: 318 -DRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACV 375
D + ++FC + + ++ L N+ ++ ++ N + Y +V
Sbjct: 144 PDVYSFTIRMKSFCKTSRPH---AALRLLNNMSSQGCEM--------NVVAYCTVVGGFY 192
Query: 376 SMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVE 435
+ + + +M A G S+ L + +L+ CK+ E L+ ++ G+ ++
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLF 252
Query: 436 TYDALIETSMSSQDFQSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMENHRPELMAAFLDE 494
TY+ I+ + A + + E PD+ +Y ++ GL +N + + +L +
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI-TYNNLIYGLCKNSKFQEAEVYLGK 311
Query: 495 VVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAE 554
+V + +E ++ +N++I +CK G ++ A R F F P+ TY SLI+G
Sbjct: 312 MVNEG-LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG 370
Query: 555 KHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHE 610
+ L L+N+ KGIK + L + + + G A Q+ + E
Sbjct: 371 ETNRALALFNEAL-------GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 134/321 (41%), Gaps = 21/321 (6%)
Query: 261 LYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDED-- 318
+Y+ G K EL M + GC + ++ LI+ +KSG L + L +
Sbjct: 234 VYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGL 293
Query: 319 RKDWNFGGETFCAVVKEYLRKGNIKGLANLIN--EAQKLEPSNIKADNSIGYGIVNACVS 376
R D T+ ++ R N+ G + EA + +P + I + C
Sbjct: 294 RPD----AITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMI--SVYGRC-- 345
Query: 377 MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVET 436
GL+ +A + E+ G Y +L A+ +E T + + ++ G D T
Sbjct: 346 -GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 437 YDALIETSMSSQDFQSAFSLFRDMR--EARVPDLKGSYLTIMTGLMENHRPELMAAFLDE 494
Y+ +I A L++DM+ R PD +Y ++ L + +R AA + E
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD-AITYTVLIDSLGKANRTVEAAALMSE 463
Query: 495 VVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAE 554
++ D I+ ++++I + KAG+ E+A TF M +P++ Y +++ +
Sbjct: 464 ML-DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGN 522
Query: 555 KHFNVLMLWNDVKRKLSSDGH 575
+ L+ D + SDGH
Sbjct: 523 ETRKAWGLYRD----MISDGH 539
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 176/449 (39%), Gaps = 77/449 (17%)
Query: 132 NPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLA 191
N LE++T+ ++L S + + AF L+ K + L+ + K NL+
Sbjct: 603 NGYELENDTLLSILGSYSSSGRHSEAFELLE-FLKEHASGSKRLITEALIVLHCKVNNLS 661
Query: 192 AFLPVFEESCRVALDEKLEFMKPDV-------AACNAALEGCCCELESVTDAERVVGTMS 244
A ALDE F P V + L CC E +A +V +
Sbjct: 662 A-----------ALDEY--FADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLR 708
Query: 245 NLGVRPDELTFGFLGYLYAVKGLQEK----INELEVLMGEFGCSNKKVFYSNLISGYVKS 300
G E + +Y G E +N+ E F CS Y+++I Y K
Sbjct: 709 LSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQ 765
Query: 301 GNLASMESTI--LR-SLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEP 357
ES + LR S D K WN +++ Y + G + + N + P
Sbjct: 766 KLWQKAESVVGNLRQSGRTPDLKTWN-------SLMSAYAQCGCYERARAIFNTMMRDGP 818
Query: 358 S-NIKADNSIG------------YGIVNACVSMGLSDKAHSILDEMNALG---------- 394
S +++ N + Y +V MG SIL ++A
Sbjct: 819 SPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKK 878
Query: 395 --GSVGLGVYIPILKAY-------CKENRTAEATILVMEISSSGLQLDVETYDALIETSM 445
S+ Y+P ++ Y CK R +A I+V E+ + ++++ ++++++
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYT 938
Query: 446 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPE---LMAAFLDEVVGDPRIE 502
+ +D++ +++ ++E + + +Y T++ + RPE L+ + + DP+++
Sbjct: 939 AIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLD 998
Query: 503 VGTHDWNSIIHAFCKAGRLEDARRTFRRM 531
+ S+I AF K LE A + F +
Sbjct: 999 T----YKSLISAFGKQKCLEQAEQLFEEL 1023
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 140/356 (39%), Gaps = 49/356 (13%)
Query: 198 EESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGF 257
EE+ V K ++P++ NA ++ C + M GV+PD +TF
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 344
Query: 258 LGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDE 317
L + + GL E L M Y+ L+ K G +
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM-------------- 390
Query: 318 DRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVS 376
D F E L + +K ++ P N + Y +++
Sbjct: 391 ---DLAF----------EILAQMPVK----------RIMP------NVVSYSTVIDGFAK 421
Query: 377 MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVET 436
G D+A ++ EM LG ++ Y +L Y K R+ EA ++ E++S G++ DV T
Sbjct: 422 AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVT 481
Query: 437 YDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENH-RPELMAAFLDE 494
Y+AL+ + +F +M RE +P+L +Y T++ G + E M F +
Sbjct: 482 YNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLL-TYSTLIDGYSKGGLYKEAMEIFREF 540
Query: 495 VVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
R +V ++++I A CK G + A M PN TY S+I+ +
Sbjct: 541 KSAGLRADVVL--YSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 107/250 (42%), Gaps = 11/250 (4%)
Query: 392 ALGGSVGLGVYI--PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIET-SMSSQ 448
A G G VY ++ AY + EA + + GL+ ++ TY+A+I+
Sbjct: 259 AFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM 318
Query: 449 DFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDW 508
+F+ F +M+ V + ++ +++ E DE+ + RIE +
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT-NRRIEQDVFSY 377
Query: 509 NSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKR 568
N+++ A CK G+++ A +M + PN +Y ++I+G+ A + L L+ +++
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR- 436
Query: 569 KLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETH 628
+ GI D + L K G + A+ ++ + + I D Y
Sbjct: 437 ------YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 629 KKLKVAKLRK 638
K+ K +++K
Sbjct: 491 KQGKYDEVKK 500
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 14/242 (5%)
Query: 378 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 437
G DK +L +M LG Y ++ +C++ + A L + SGLQ +V T+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 438 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 497
+ LI + Q A +F +M+ V +Y T++ G + E+ F +++V
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 498 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV---SAE 554
+ I+ +N++I CK + A + + ++ PN T+ +LI G +A+
Sbjct: 372 NG-IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNAD 430
Query: 555 KHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIF 614
+ F + K + S H + + LV AF + FD A QV+ + I
Sbjct: 431 RGFEL------YKSMIRSGCHPNEQTFNMLVSAF----CRNEDFDGASQVLREMVRRSIP 480
Query: 615 VD 616
+D
Sbjct: 481 LD 482
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 97/243 (39%), Gaps = 45/243 (18%)
Query: 401 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 460
V+ + K + + AT M++ G VE+ +A + + + A +R+M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 461 REARV-PDL-----------------KG-----------------SYLTIMTGLMENHRP 485
R ++ P+ KG SY T++ G E +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE--KG 287
Query: 486 ELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYL 544
L +A L ++G ++ +N++IH FC+A +L++A + F M + PN TY
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 545 SLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQV 604
+LINGY H + D+ GI+ D +A ++ + K A Q
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMV-------CNGIQRDILTYNALIFGLCKQAKTRKAAQF 400
Query: 605 VEK 607
V++
Sbjct: 401 VKE 403
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 10/248 (4%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 273
P V +CNA + + V A R M + P+ T + Y G +K E
Sbjct: 201 PTVESCNAYMSSLLGQ-GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE 259
Query: 274 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 333
L M G V Y+ LI+G+ + G L+S + L+++ + N TF ++
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSS--ALKLKNMMGKSGLQPNV--VTFNTLI 315
Query: 334 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNA 392
+ R ++ + + E ++ N+ A N++ Y ++N G + A ++M
Sbjct: 316 HGFCRAMKLQEASKVFGE---MKAVNV-APNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 393 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 452
G + Y ++ CK+ +T +A V E+ L + T+ ALI ++
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431
Query: 453 AFSLFRDM 460
F L++ M
Sbjct: 432 GFELYKSM 439
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 14/242 (5%)
Query: 378 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 437
G DK +L +M LG Y ++ +C++ + A L + SGLQ +V T+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 438 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 497
+ LI + Q A +F +M+ V +Y T++ G + E+ F +++V
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 498 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV---SAE 554
+ I+ +N++I CK + A + + ++ PN T+ +LI G +A+
Sbjct: 372 NG-IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNAD 430
Query: 555 KHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIF 614
+ F + K + S H + + LV AF + FD A QV+ + I
Sbjct: 431 RGFEL------YKSMIRSGCHPNEQTFNMLVSAF----CRNEDFDGASQVLREMVRRSIP 480
Query: 615 VD 616
+D
Sbjct: 481 LD 482
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 97/243 (39%), Gaps = 45/243 (18%)
Query: 401 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 460
V+ + K + + AT M++ G VE+ +A + + + A +R+M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 461 REARV-PDL-----------------KG-----------------SYLTIMTGLMENHRP 485
R ++ P+ KG SY T++ G E +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE--KG 287
Query: 486 ELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYL 544
L +A L ++G ++ +N++IH FC+A +L++A + F M + PN TY
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 545 SLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQV 604
+LINGY H + D+ GI+ D +A ++ + K A Q
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMV-------CNGIQRDILTYNALIFGLCKQAKTRKAAQF 400
Query: 605 VEK 607
V++
Sbjct: 401 VKE 403
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 10/248 (4%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 273
P V +CNA + + V A R M + P+ T + Y G +K E
Sbjct: 201 PTVESCNAYMSSLLGQ-GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE 259
Query: 274 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 333
L M G V Y+ LI+G+ + G L+S + L+++ + N TF ++
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSS--ALKLKNMMGKSGLQPNV--VTFNTLI 315
Query: 334 KEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNA 392
+ R ++ + + E ++ N+ A N++ Y ++N G + A ++M
Sbjct: 316 HGFCRAMKLQEASKVFGE---MKAVNV-APNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 393 LGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQS 452
G + Y ++ CK+ +T +A V E+ L + T+ ALI ++
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431
Query: 453 AFSLFRDM 460
F L++ M
Sbjct: 432 GFELYKSM 439
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 1/178 (0%)
Query: 370 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
++N G ++A ILD M G + + Y ++ +CK + EA E+ +G
Sbjct: 274 MINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTG 333
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 489
L+LD Y L+ + + A L +M+ +R +Y I+ GL R E
Sbjct: 334 LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEAL 393
Query: 490 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 547
LD+ G + + + I++A C G LE A + M+ P+ T+ L+
Sbjct: 394 QMLDQ-WGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 10/194 (5%)
Query: 429 GLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV--PDLKGSYLTIMTGLMENHRPE 486
GLQ + ++ L++ + D AF + +M+ + + P+ +Y T+M L + R +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPN-SITYSTLMDCLFAHSRSK 249
Query: 487 LMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSL 546
++++ I +N +I+ FC+AG +E A++ M PN Y +L
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 547 INGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 606
+NG+ K +++VK+ G+K D + + G D AM+++
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKK-------TGLKLDTVGYTTLMNCFCRNGETDEAMKLLG 362
Query: 607 KSHEMKIFVDKWRY 620
+ + D Y
Sbjct: 363 EMKASRCRADTLTY 376
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 110/282 (39%), Gaps = 49/282 (17%)
Query: 243 MSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGN 302
+S G+ PD +TF + + G E+ ++ M + GC+ YS L++G+ K G
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 303 LASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKA 362
+ + T DE +K + +K
Sbjct: 319 IQEAKQTF-----DEVKK-------------------------------------TGLKL 336
Query: 363 DNSIGYGIVNACVSM-GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATIL 421
D ++GY + C G +D+A +L EM A Y IL+ E R+ EA +
Sbjct: 337 D-TVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQM 395
Query: 422 VMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLME 481
+ + S G+ L+ +Y ++ + + + A M E + ++ ++ L E
Sbjct: 396 LDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCE 455
Query: 482 NHRPELMAAFLDEVVGDPRIEV--GTHDWNSIIHAFCKAGRL 521
+ E+ L +G RI + G W +++ + CK +L
Sbjct: 456 SGYTEIGVRVL---IGFLRIGLIPGPKSWGAVVESICKERKL 494
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 103/250 (41%), Gaps = 43/250 (17%)
Query: 358 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 417
S+IKAD I IV+ G A ++ EM+ G + Y ++ ++C R ++
Sbjct: 4 SHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSD 63
Query: 418 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 477
A L+ + + D+ T+ ALI + + A ++++M + + T +T
Sbjct: 64 ADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSI------FPTTIT 117
Query: 478 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFE 537
+NS+I FCK R++DA+R M
Sbjct: 118 ------------------------------YNSMIDGFCKQDRVDDAKRMLDSMASKGCS 147
Query: 538 PNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGF 597
P+ T+ +LINGY A++ N + ++ ++ R +GI + ++ + G
Sbjct: 148 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHR-------RGIVANTVTYTTLIHGFCQVGD 200
Query: 598 FDAAMQVVEK 607
DAA ++ +
Sbjct: 201 LDAAQDLLNE 210
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 112/553 (20%), Positives = 220/553 (39%), Gaps = 80/553 (14%)
Query: 62 DQVSTLQTTLHKSLITS-----DTDEAWKSFKSLTSHQAFPPKPLT-NSLITHLSSLGDI 115
D++S L H L++S +EA++ F P +T +S+I L G
Sbjct: 220 DEISELNLITHTILLSSYYNLHAIEEAYRDM----VMSGFDPDVVTFSSIINRLCKGG-- 273
Query: 116 HNLKRAFASAVFLMERNPMVLESE--TIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPF 173
+ + L E M + T ++DS+ AN A AL M V
Sbjct: 274 ----KVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDL 329
Query: 174 AMWGNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESV 233
++ VL++ + K+G+L E++ ++ L++ P+V A ++G C + +
Sbjct: 330 VVY-TVLMDGLFKAGDLREA----EKTFKMLLEDN---QVPNVVTYTALVDGLC-KAGDL 380
Query: 234 TDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNL 293
+ AE ++ M V P+ +T YS++
Sbjct: 381 SSAEFIITQMLEKSVIPNVVT-----------------------------------YSSM 405
Query: 294 ISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQ 353
I+GYVK G L S +LR + D++ F T+ V+ + G + L E +
Sbjct: 406 INGYVKKGMLEEAVS-LLRKMEDQNVVPNGF---TYGTVIDGLFKAGKEEMAIELSKEMR 461
Query: 354 KLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKEN 413
+ ++ +N I +VN +G + ++ +M + G ++ Y ++ + K
Sbjct: 462 LI---GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518
Query: 414 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSY 472
A E+ G+ DV +Y+ LI + + ++ ++ MRE + PD+ ++
Sbjct: 519 DEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDI-ATF 576
Query: 473 LTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMN 532
+M + E + D++ I+ N ++ C+ G++E+A +M
Sbjct: 577 NIMMNSQRKQGDSEGILKLWDKM-KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Query: 533 FLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAM 592
++ PN TY ++ ++ KH ++ + LS GIK + + + +
Sbjct: 636 LMEIHPNLTTYRIFLD---TSSKHKRADAIFKTHETLLSY----GIKLSRQVYNTLIATL 688
Query: 593 VKGGFFDAAMQVV 605
K G A V+
Sbjct: 689 CKLGMTKKAAMVM 701
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 204/493 (41%), Gaps = 66/493 (13%)
Query: 79 DTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFL---MERNPMV 135
D EA K+FK L P +L+ L GD+ +SA F+ M ++
Sbjct: 344 DLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDL-------SSAEFIITQMLEKSVI 396
Query: 136 LESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSGNLAAFLP 195
T +M++ A +L+R M +++ VP +++ + K+G
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKM-EDQNVVPNGFTYGTVIDGLFKAG------- 448
Query: 196 VFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNL---GVRPDE 252
+E + L +++ + V N L+ L+ + + V G + ++ GV D+
Sbjct: 449 --KEEMAIELSKEMRLI--GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQ 504
Query: 253 LTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILR 312
+ + L ++ G +E M E G V Y+ LISG +K G + +
Sbjct: 505 INYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGA------- 557
Query: 313 SLSDEDRKDWNFGG----------ETFCAVVKEYLRKGNIKGLANLINEAQK--LEPSNI 360
DW + G TF ++ ++G+ +G+ L ++ + ++PS +
Sbjct: 558 --------DWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLM 609
Query: 361 KADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 420
+ +G N G ++A IL++M + L Y L K R A+A
Sbjct: 610 SCNIVVGMLCEN-----GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR-ADAIF 663
Query: 421 LVME-ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR--VPDLKGSYLTIMT 477
E + S G++L + Y+ LI T + A + DM EAR +PD ++ ++M
Sbjct: 664 KTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM-EARGFIPDTV-TFNSLMH 721
Query: 478 G-LMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQF 536
G + +H + ++ + V+ + I +N+II AG +++ + M
Sbjct: 722 GYFVGSHVRKALSTY--SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGM 779
Query: 537 EPNDQTYLSLING 549
P+D TY +LI+G
Sbjct: 780 RPDDFTYNALISG 792
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 162/423 (38%), Gaps = 70/423 (16%)
Query: 231 ESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL-QEKINELEVLMGEFGCSNKKVF 289
E + A R + M GV PD + L + + V GL ++++ + M G S
Sbjct: 72 ERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFA 131
Query: 290 YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLI 349
+ LI + K G L+ S + + D +N C GLA+
Sbjct: 132 LNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCE-----------HGLAD-- 178
Query: 350 NEAQKLEPSNIKAD---NSIGYG-IVNACVSMGLSDKAHSILDE---MNALGGSVGLGVY 402
EA + +K +++ Y +++ +G +A +++DE +N + ++ L Y
Sbjct: 179 -EAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSY 237
Query: 403 I-------------------------PILKAYCKENRTAEATILVMEISSSGLQLDVETY 437
I+ CK + E +L+ E+ + + TY
Sbjct: 238 YNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTY 297
Query: 438 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 497
L+++ + ++ A +L+ M +P Y +M GL + ++
Sbjct: 298 TTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLE 357
Query: 498 DPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA---E 554
D ++ + +++ CKAG L A +M PN TY S+INGYV E
Sbjct: 358 DNQVP-NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 555 KHFNVLMLWNDVKRKLSSDGHKGIKFDHNLV-DAFLYAMVKGGFFDAAMQ--VVEKSHEM 611
+ ++L RK+ D N+V + F Y V G F A + +E S EM
Sbjct: 417 EAVSLL-------RKME---------DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 612 KIF 614
++
Sbjct: 461 RLI 463
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 151/356 (42%), Gaps = 28/356 (7%)
Query: 116 HNLKRAFASAVFLMERNPMVLESETIHAMLDSMKGANTAAPAFALV---RCM-----FKN 167
HN+ ++AS V L+ + E I ++ +K N+ A +V R M F+
Sbjct: 58 HNVT-SYASLVTLLCSQEIPYEVPKITILM--IKSCNSVRDALFVVDFCRTMRKGDSFEI 114
Query: 168 RYFVPFAMWGNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCC 227
+Y + + N+L + R + EE R+ + + + PD+ N + G C
Sbjct: 115 KYKLTPKCYNNLLSSLAR--------FGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYC 166
Query: 228 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKK 287
+L V +A++ V + G PD T+ + + + ++ M + GC +
Sbjct: 167 -KLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNE 225
Query: 288 VFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLAN 347
V Y+ LI G ++ + S +++ D + T+ ++ G N
Sbjct: 226 VSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNV----RTYTVLIDALCGSGQKSEAMN 281
Query: 348 LINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILK 407
L +++ S IK D+ + ++ + S D+A +L+ M G + Y ++K
Sbjct: 282 LF---KQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIK 338
Query: 408 AYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 463
+CK+N +A L+ ++ L D+ TY+ LI SS + SA+ L M E+
Sbjct: 339 GFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEES 393
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 7/180 (3%)
Query: 378 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 437
GL ++ + EM S + + ++ YCK EA V + +G D TY
Sbjct: 134 GLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTY 193
Query: 438 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 497
+ I ++ +AF +F++M + + SY ++ GL E + + + L ++
Sbjct: 194 TSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKD 253
Query: 498 D---PRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAE 554
D P + + +I A C +G+ +A F++M+ +P+D Y LI + S +
Sbjct: 254 DNCCPNVRT----YTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGD 309
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 144/354 (40%), Gaps = 56/354 (15%)
Query: 208 KLEFMKPDVAACNAALEGCCCELESV-TDAERVVGTMSNLGVRPDELTFGFLGYLYAVKG 266
K + + PD N + CC+ S+ +A +V M G D++T+ L +Y G
Sbjct: 271 KSDGIAPDAYTYNTLI--TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY---G 325
Query: 267 LQEKINELEVLMGEF---GCSNKKVFYSNLISGYVKSGNL-ASMESTILRSLSDEDRKDW 322
+ E ++ E G S V Y++LIS Y + G L +ME + ++++ K
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME--LKNQMAEKGTKPD 383
Query: 323 NFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDK 382
F T+ ++ + R G ++ ++ E + + K + + + G +
Sbjct: 384 VF---TYTTLLSGFERAGKVESAMSIFEEMRN---AGCKPNICTFNAFIKMYGNRGKFTE 437
Query: 383 AHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 442
I DE+N G S + + +L + + +E + + E+ +G + ET++ LI
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS 497
Query: 443 TSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRI 501
F+ A +++R M +A V PDL
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTPDLS-------------------------------- 525
Query: 502 EVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 555
+N+++ A + G E + + M + +PN+ TY SL++ Y + ++
Sbjct: 526 -----TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 103/256 (40%), Gaps = 10/256 (3%)
Query: 353 QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKE 412
+K++ I D ++ C L +A + +EM A G S Y +L Y K
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 413 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGS 471
+R EA ++ E+ +G + TY++LI A L M E PD+ +
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV-FT 386
Query: 472 YLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRM 531
Y T+++G + E + +E + + + +N+ I + G+ + + F +
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEE-MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 532 NFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYA 591
N P+ T+ +L+ + V ++ ++KR G + + + A
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR-------AGFVPERETFNTLISA 498
Query: 592 MVKGGFFDAAMQVVEK 607
+ G F+ AM V +
Sbjct: 499 YSRCGSFEQAMTVYRR 514
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 133/325 (40%), Gaps = 26/325 (8%)
Query: 235 DAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLI 294
+A +V+ M G P +T+ L YA G+ ++ EL+ M E G Y+ L+
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 295 SGYVKSGNLASMESTILRSLSDEDRKDWNFGGE----TFCAVVKEYLRKGNIKGLANLIN 350
SG+ ++G + S S+ +E R N G + TF A +K Y +G + + +
Sbjct: 392 SGFERAGKVESA-----MSIFEEMR---NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 351 EAQ--KLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKA 408
E L P + + + N G+ + + EM G + ++ A
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQN-----GMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 409 YCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDL 468
Y + +A + + +G+ D+ TY+ ++ ++ + + +M + R
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 469 KGSYLTIMTGLMENHRPELMAAFLDEV---VGDPRIEVGTHDWNSIIHAFCKAGRLEDAR 525
+ +Y +++ LM + +EV V +PR + +++ K L +A
Sbjct: 559 ELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL----LKTLVLVCSKCDLLPEAE 614
Query: 526 RTFRRMNFLQFEPNDQTYLSLINGY 550
R F + F P+ T S+++ Y
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIY 639
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 146/342 (42%), Gaps = 28/342 (8%)
Query: 170 FVPFAMWGNVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCE 229
FVP N L+ + G+ + V+ R LD + PD++ N L
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVY----RRMLDAGV---TPDLSTYNTVL-AALAR 536
Query: 230 LESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVK---GLQEKINELEVLMGEFGCSNK 286
+E+V+ M + +P+ELT+ L + YA GL + E EV G +
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAE-EVYSGVI--EPR 593
Query: 287 KVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNI---K 343
V L+ K L E R+ S+ + ++ T ++V Y R+ +
Sbjct: 594 AVLLKTLVLVCSKCDLLPEAE----RAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649
Query: 344 GLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYI 403
G+ + + E + PS + NS+ Y + + G K+ IL E+ A G + Y
Sbjct: 650 GVLDYMKE-RGFTPS-MATYNSLMY-MHSRSADFG---KSEEILREILAKGIKPDIISYN 703
Query: 404 PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 463
++ AYC+ R +A+ + E+ +SG+ DV TY+ I + + F+ A + R M +
Sbjct: 704 TVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKH 763
Query: 464 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG-DPRIEVG 504
+ +Y +I+ G + +R + F++++ DP G
Sbjct: 764 GCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKG 805
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/434 (19%), Positives = 163/434 (37%), Gaps = 52/434 (11%)
Query: 179 VLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAER 238
L+ ++G + + + +FEE KP++ NA ++ T+ +
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGC-------KPNICTFNAFIK-MYGNRGKFTEMMK 440
Query: 239 VVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYV 298
+ ++ G+ PD +T+ L ++ G+ +++ + M G ++ ++ LIS Y
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 299 KSGNLASMESTILRSLSD----EDRKDWNF-------GGE-------------------- 327
+ G+ T+ R + D D +N GG
Sbjct: 501 RCGSF-EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 328 -TFCAVVKEYLRKGNIKGLANLINEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAH 384
T+C+++ Y I + +L E +EP + +V C L +A
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT-----LVLVCSKCDLLPEAE 614
Query: 385 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 444
E+ G S + ++ Y + A+A ++ + G + TY++L+
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMH 674
Query: 445 MSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEV 503
S DF + + R++ + PD+ SY T++ N R + E+ + I
Sbjct: 675 SRSADFGKSEEILREILAKGIKPDII-SYNTVIYAYCRNTRMRDASRIFSEMR-NSGIVP 732
Query: 504 GTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 563
+N+ I ++ E+A R M PN TY S+++GY + +
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Query: 564 NDVKRKLSSDGHKG 577
D+ R L KG
Sbjct: 793 EDL-RNLDPHAPKG 805
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 131/313 (41%), Gaps = 28/313 (8%)
Query: 328 TFCAVVKEYLRKGNIKGLANLINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS 385
T+ ++ + R N+ A + N+ Q L+P +I A N + G++ S SD A
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKP-DIVAHNVMLEGLLR---SRKKSD-AIK 354
Query: 386 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 445
+ M + G + Y +++ +CK++ A ++ SGLQ D Y LI
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 446 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 505
+ + + + L ++M+E P +Y ++ + PE ++++ + IE
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN-EIEPSI 473
Query: 506 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 565
H +N I+ ++ A E R + M P+D +Y LI G + K +
Sbjct: 474 HTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKS-------RE 526
Query: 566 VKRKLSSDGHKGIK---FDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEM---KIFVDKW- 618
R L KG+K D+N A + + F+ Q + S + +IF +W
Sbjct: 527 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFA-RWA 585
Query: 619 -----RYKQAFME 626
R+KQ FME
Sbjct: 586 QMTRRRFKQRFME 598
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 5/186 (2%)
Query: 370 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
++ AC G A S+ M G + + Y ++ Y K ++ + L+ E+ S+G
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELM 488
+ DV TY+ LI + + A + ++ R VP ++ ++ G + R +
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTL-AFTDVIGGF--SKRGDFQ 565
Query: 489 AAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 547
AF L + D R++ ++++H +CKA R+E A F ++ +P+ Y +LI
Sbjct: 566 EAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Query: 548 NGYVSA 553
+GY S
Sbjct: 626 HGYCSV 631
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 104/237 (43%), Gaps = 10/237 (4%)
Query: 370 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
+++ ++G +DKA + G L ++ A + ++A + + + G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELM 488
L+LDV TY+ L+ + F L +MR A + PD+ + I + ++ + E
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDE-A 532
Query: 489 AAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 548
+ E++ + T + +I F K G ++A + M L+ +P+ T +L++
Sbjct: 533 NEIISELIRRGFVP-STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591
Query: 549 GYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVV 605
GY A++ ++L+N + G+K D L + ++ G + A +++
Sbjct: 592 GYCKAQRMEKAIVLFNKLL-------DAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 5/186 (2%)
Query: 370 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
++ AC G A S+ M G + + Y ++ Y K ++ + L+ E+ S+G
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELM 488
+ DV TY+ LI + + A + ++ R VP ++ ++ G + R +
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTL-AFTDVIGGF--SKRGDFQ 565
Query: 489 AAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 547
AF L + D R++ ++++H +CKA R+E A F ++ +P+ Y +LI
Sbjct: 566 EAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Query: 548 NGYVSA 553
+GY S
Sbjct: 626 HGYCSV 631
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 104/237 (43%), Gaps = 10/237 (4%)
Query: 370 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
+++ ++G +DKA + G L ++ A + ++A + + + G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELM 488
L+LDV TY+ L+ + F L +MR A + PD+ + I + ++ + E
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDE-A 532
Query: 489 AAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 548
+ E++ + T + +I F K G ++A + M L+ +P+ T +L++
Sbjct: 533 NEIISELIRRGFVP-STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591
Query: 549 GYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVV 605
GY A++ ++L+N + G+K D L + ++ G + A +++
Sbjct: 592 GYCKAQRMEKAIVLFNKLL-------DAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 358 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 417
S+ K D +++ C +G D SI+ EM+ LG Y I+ Y K E
Sbjct: 209 SDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEE 268
Query: 418 ATILVMEISSSGLQL-DVETYDALIETSMSSQDF---QSAFSLFRDMREARVPDLKGSYL 473
++ ++ G L DV T +++I + + ++ +S +S F+ M PD+ +
Sbjct: 269 MESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLM--GVQPDITTFNI 326
Query: 474 TIMT----GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFR 529
I++ G+ + M + +D + + T +N +I F KAGR+E FR
Sbjct: 327 LILSFGKAGMYKK-----MCSVMD-FMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFR 380
Query: 530 RMNFLQFEPNDQTYLSLINGYVSA 553
+M + +PN TY SL+N Y A
Sbjct: 381 KMKYQGVKPNSITYCSLVNAYSKA 404
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 5/185 (2%)
Query: 382 KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALI 441
KA S+L EM + Y +++ +C+ +A L E+ SG + T+ LI
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Query: 442 ETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVV--GDP 499
+ + A ++M+ + Y +++ G + + A DEV+ GD
Sbjct: 220 DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS 279
Query: 500 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNV 559
+ +N++I FCK G+L++A F M PN TY LI+G K
Sbjct: 280 PCAI---TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 560 LMLWN 564
L L N
Sbjct: 337 LQLLN 341
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
Query: 405 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMRE-A 463
+L+ Y + +T A ++ + G +V ++ L++ + + A SL R+MR +
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 464 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 523
+PD+ SY T++ G E E +E+ G W +I AFCKAG++++
Sbjct: 173 LMPDV-FSYNTVIRGFCEGKELEKALELANEMKGSG-CSWSLVTWGILIDAFCKAGKMDE 230
Query: 524 ARRTFRRMNFLQFEPNDQTYLSLINGYVSA 553
A + M F+ E + Y SLI G+
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 381 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 440
D+ + ++ A G + Y ++KA CK RT EA IL E+ S GL+ V TY+++
Sbjct: 596 DRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSM 655
Query: 441 IETSMSSQDFQSAFSLFRDMRE-ARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 499
I+ + S M E + PD+ +Y +++ GL + RP +E+ G
Sbjct: 656 IDGWCKEGEIDRGLSCIVRMYEDEKNPDVI-TYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Query: 500 ----RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTY 543
RI + ++I CK G +A FR M + EP+ Y
Sbjct: 715 CYPNRIT-----FMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 3/166 (1%)
Query: 405 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REA 463
++K C+ R +A + +++ G + A I+ + ++ LFRD+
Sbjct: 550 LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANG 609
Query: 464 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 523
PD+ +Y ++ L + R +E+V ++ +NS+I +CK G ++
Sbjct: 610 HCPDVI-AYHVLIKALCKACRTMEADILFNEMVSKG-LKPTVATYNSMIDGWCKEGEIDR 667
Query: 524 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 569
RM + P+ TY SLI+G ++ + + WN++K K
Sbjct: 668 GLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGK 713
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 144/359 (40%), Gaps = 53/359 (14%)
Query: 233 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 292
+DA+++ M+ G+ P+ +T+ L +G + +L M G V ++
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNA 273
Query: 293 LISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLR-------------- 338
L+ G+ K G + +E+ L L ++D + G + +++ R
Sbjct: 274 LLDGFCKLGRM--VEAFELLRLFEKD--GFVLGLRGYSSLIDGLFRARRYTQAFELYANM 329
Query: 339 -KGNIK-----------GL--ANLINEAQKLEPS----NIKADNSIGYGIVNACVSMGLS 380
K NIK GL A I +A KL S I D ++ A GL
Sbjct: 330 LKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLL 389
Query: 381 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 440
++ S+ EM+ + ++ + C+ EA + EI SG V T++AL
Sbjct: 390 EEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNAL 449
Query: 441 IETSMSSQDFQSAFSLFRDMREARVPDL--------KGSYLTIMT--GLMENHRPELMAA 490
I+ S + + A L M R L S+ T++ +++ +R +A
Sbjct: 450 IDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRD--LAH 507
Query: 491 FLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 549
F D P I +N +I+ FC+AG ++ A + + P+ TY +LING
Sbjct: 508 FAD-TGSSPDIV----SYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLING 561
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 14/292 (4%)
Query: 335 EYL-RKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNAL 393
E+L R N+ N + ++ +K + ++ + + GL ++ + M +
Sbjct: 108 EFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQM 167
Query: 394 GGSVGLGVYIPILKAYCKENRTAEATILVMEISSS-GLQLDVETYDALIETSMSSQDFQS 452
G S + + +L K RT A L E+ + G+ D T++ LI +
Sbjct: 168 GISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDE 227
Query: 453 AFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR-IEVGTHDWNS 510
AF +F+DM PD+ +Y TI+ GL + ++ L ++ + + +
Sbjct: 228 AFRIFKDMELYHCNPDVV-TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTT 286
Query: 511 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKL 570
++ +C +++A F M +PN TY +LI G A + ++++K L
Sbjct: 287 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR-------YDEIKDIL 339
Query: 571 --SSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 620
+D D + + A G DAAM+V ++ MK+ D Y
Sbjct: 340 IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 103/244 (42%), Gaps = 15/244 (6%)
Query: 328 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 387
TF +++ L++G +L +E ++ + D+ ++N + D+A I
Sbjct: 175 TFNSLLSILLKRGRTGMAHDLFDEMRR--TYGVTPDSYTFNTLINGFCKNSMVDEAFRIF 232
Query: 388 DEMNALGGSVGLGVYIPILKAYCKENRT--AEATILVMEISSSGLQLDVETYDALIETSM 445
+M + + Y I+ C+ + A + M ++ + +V +Y L+
Sbjct: 233 KDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYC 292
Query: 446 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 505
Q+ A +F DM + +Y T++ GL E HR + + L + G+
Sbjct: 293 MKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL--IGGNDAFTTFA 350
Query: 506 HD---WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI------NGYVSAEKH 556
D +N +I A C AG L+ A + F+ M ++ P+ +Y LI N + AE
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 557 FNVL 560
FN L
Sbjct: 411 FNEL 414
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 141/363 (38%), Gaps = 58/363 (15%)
Query: 235 DAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINEL-EVLMGEFGCSNKKVFYSNL 293
++ ++ TM +G+ P LTF L + +G ++L + + +G + ++ L
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215
Query: 294 ISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIK----GLANLI 349
I+G+ K+ SM R D + N T+ ++ R G +K L+ ++
Sbjct: 216 INGFCKN----SMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 350 NEAQKLEPSNIKADNSI-GYG----------IVNACVSMGLSDKAHSI------------ 386
+A + P+ + + GY + + +S GL A +
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR 331
Query: 387 LDEMN--ALGGSVGLGVYIP-------ILKAYCKENRTAEATILVMEISSSGLQLDVETY 437
DE+ +GG+ + P ++KA+C A + E+ + L D +Y
Sbjct: 332 YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Query: 438 DALIETSMSSQDFQSAFSLFRDMREARV-------PDLKGSYLTIMTGLMENHRPE---- 486
LI T +F A +LF ++ E V L +Y + L N + +
Sbjct: 392 SVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEK 451
Query: 487 LMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSL 546
+ + V DP + ++I C+ G+ + A M +F P+ +TY L
Sbjct: 452 VFRQLMKRGVQDP------PSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELL 505
Query: 547 ING 549
I+G
Sbjct: 506 IDG 508
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 131/313 (41%), Gaps = 28/313 (8%)
Query: 328 TFCAVVKEYLRKGNIKGLANLINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS 385
T+ ++ + R N+ A + N+ L+P +I A N + G++ SM SD A
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKP-DIVAHNVMLEGLLR---SMKKSD-AIK 354
Query: 386 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 445
+ M + G + Y +++ +CK++ A ++ SGLQ D Y LI
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 446 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 505
+ + + + L ++M+E P +Y ++ + PE ++++ + IE
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN-EIEPSI 473
Query: 506 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWND 565
H +N I+ ++ A E R + M P+D +Y LI G +S K +
Sbjct: 474 HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS-------RE 526
Query: 566 VKRKLSSDGHKGIK---FDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEM---KIFVDKW- 618
R L KG+K D+N A + + F+ Q + S + +IF +W
Sbjct: 527 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFA-RWA 585
Query: 619 -----RYKQAFME 626
R KQ FME
Sbjct: 586 QMTRRRCKQRFME 598
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 8/230 (3%)
Query: 328 TFCAVVKEYLRKGNIKGLANLINEA--QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS 385
T+ ++ + R N+ A + N+ L+P +I A N + G++ SM SD A
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKP-DIVAHNVMLEGLLR---SMKKSD-AIK 353
Query: 386 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 445
+ M + G + Y +++ +CK++ A ++ SGLQ D Y LI
Sbjct: 354 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 413
Query: 446 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 505
+ + + + L ++M+E P +Y ++ + PE ++++ + IE
Sbjct: 414 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN-EIEPSI 472
Query: 506 HDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 555
H +N I+ ++ A E R + M P+D +Y LI G +S K
Sbjct: 473 HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 522
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Query: 381 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENR-TAEATILVMEISSSGLQLDVETYDA 439
+KAH + EM G V VY ++ AY + R A T+L SS Q DV TY
Sbjct: 167 EKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSI 226
Query: 440 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 499
LI++ + F L DMR + +Y T++ + M + L +++G+
Sbjct: 227 LIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGED 286
Query: 500 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
+ + NS + AF G++E + + EPN +T+ L++ Y
Sbjct: 287 DCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSY 337
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 101/225 (44%), Gaps = 13/225 (5%)
Query: 384 HSILDEM---NALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 440
S+ +EM ++ G + Y +++ K + A + SG ++D +TY+ L
Sbjct: 225 QSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNL 284
Query: 441 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAF-LDEVVGDP 499
+ ++ AF ++ M + +Y I+ L ++ R L AAF L + + +
Sbjct: 285 MMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGR--LDAAFKLFQQMKER 342
Query: 500 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNV 559
++ ++S++ + KAGRL+ + + + M P+ ++SLI+ Y A K
Sbjct: 343 KLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTA 402
Query: 560 LMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQV 604
L LW+++K+ G + + L + + K G + AM V
Sbjct: 403 LRLWDEMKK-------SGFRPNFGLYTMIIESHAKSGKLEVAMTV 440
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 163/407 (40%), Gaps = 36/407 (8%)
Query: 228 CELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEF------ 281
C + V DA ++V M N G PD +TF L + G E I ELEV F
Sbjct: 173 CTIYRVIDAHKLVFDMRNRGHLPDVVTFTTL-----IGGYCE-IRELEVAHKVFDEMRVC 226
Query: 282 GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSD--EDRKDWNFGGETFCAVVKEYLRK 339
G + S LI G++K ++ + +++ L + ++ D + F +V R+
Sbjct: 227 GIRPNSLTLSVLIGGFLKMRDVETGRK-LMKELWEYMKNETDTSMKAAAFANLVDSMCRE 285
Query: 340 GNIKGLANLINEAQKLEPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNALGGSVG 398
G + + E N++ YG ++++ + A I+ M + G
Sbjct: 286 GYFNDIFEIAENMSLCESVNVE----FAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPR 341
Query: 399 LGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFR 458
Y I+ CK+ A L+ E S TY L+E+ D A ++
Sbjct: 342 RTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLE 401
Query: 459 DMREARVPDLKGSYLTIMTGLMENHRP-ELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCK 517
M D Y + GL P E++ + + GD R + + N++I+ CK
Sbjct: 402 LMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPD--EYTLNTVINGLCK 459
Query: 518 AGRLEDARRTFRRMNFLQF-EPNDQTYLSLINGYVS---AEKHFNVLMLWNDVKRKLSSD 573
GR++DA + M +F P+ T +++ G ++ AE+ +VL R + +
Sbjct: 460 MGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVL------NRVMPEN 513
Query: 574 GHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 620
K +N V L+ + KG D AM V + + + D Y
Sbjct: 514 KIKPGVVAYNAVIRGLFKLHKG---DEAMSVFGQLEKASVTADSTTY 557
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 125/327 (38%), Gaps = 16/327 (4%)
Query: 247 GVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLAS- 305
GV P +T L G EK + L M E G S V Y+ LI G N+
Sbjct: 151 GVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKA 210
Query: 306 --MESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKAD 363
+ +T+ + +R N C K + N K L +++ +Q P +I
Sbjct: 211 LYLFNTMNKYGIRPNRVTCNIIVHALCQ--KGVIGNNNKKLLEEILDSSQANAPLDI--- 265
Query: 364 NSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVM 423
I ++++C G +A + EM+ VY I++ C A +
Sbjct: 266 -VICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMC 324
Query: 424 EISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLM--- 480
++ G+ DV TY+ LI F A L M+ V + SY I+ GL
Sbjct: 325 DMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHG 384
Query: 481 ENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPND 540
+ +R + + P + + WN +I + + G A M +PN
Sbjct: 385 DVNRANEFLLSMLKSSLLPEVLL----WNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNV 440
Query: 541 QTYLSLINGYVSAEKHFNVLMLWNDVK 567
T +LI+GYV + + + N+++
Sbjct: 441 YTNNALIHGYVKGGRLIDAWWVKNEMR 467
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 151/365 (41%), Gaps = 17/365 (4%)
Query: 70 TLHKSLIT-SDTDEAWKSFKSLTSHQAFPPKPLTNSLITHLSSLGDIHNLKRAFASAVFL 128
TL K L + ++ D+A F ++ + P + N ++ L G I N + +
Sbjct: 196 TLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILD 255
Query: 129 MERNPMVLESETIHAMLDSMKGANTAAPAFALVRCMFKNRYFVPFAMWGNVLVEIIRKSG 188
+ L+ ++DS A + + M + ++ NV++ + SG
Sbjct: 256 SSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY-NVIIRGLCSSG 314
Query: 189 NLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGV 248
N+ A + + ++ PDV N + C E +A + GTM N GV
Sbjct: 315 NMVAAYGFMCDMVKRGVN-------PDVFTYNTLISALCKE-GKFDEACDLHGTMQNGGV 366
Query: 249 RPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMES 308
PD++++ + + G + NE + M + + + ++ +I GY + G+ +S S
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALS 426
Query: 309 TILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY 368
+ LS + + T A++ Y++ G + + NE + + I D +
Sbjct: 427 VLNLMLSYGVKPNV----YTNNALIHGYVKGGRLIDAWWVKNE---MRSTKIHPDTTTYN 479
Query: 369 GIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS 428
++ A ++G A + DEM G + Y +++ C + R +A L+ I ++
Sbjct: 480 LLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQAT 539
Query: 429 GLQLD 433
G+ +D
Sbjct: 540 GITID 544
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 36/260 (13%)
Query: 378 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 437
G ++A ++ EM G S GL + ++ Y + + A L+ ++ + G+ DV T+
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 438 DALIETSMSSQDFQSAFSLFRDMREARV-PDL--------KGSYLTIMTGLMENHRPELM 488
A+I + + A +FR M A V P+ S L ++ E H +
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 489 AAFLDEV-VGDPRIEV--------------------GTHDWNSIIHAFCKAGRLEDARRT 527
F+D+V VG+ +++ + WNS+I +C+AG A
Sbjct: 381 MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYEL 440
Query: 528 FRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDA 587
F RM PN T+ ++I+GY+ + D+ +++ DG ++ + +
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAM----DLFQRMEKDGK--VQRNTATWNL 494
Query: 588 FLYAMVKGGFFDAAMQVVEK 607
+ ++ G D A+++ K
Sbjct: 495 IIAGYIQNGKKDEALELFRK 514
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 59/115 (51%)
Query: 433 DVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFL 492
DV T++++I + A+ LF M++A + ++ T+++G ++N
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 493 DEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 547
+ D +++ T WN II + + G+ ++A FR+M F +F PN T LSL+
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 9/226 (3%)
Query: 319 RKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLE-PSNIKADNSIGYGIVNACVSM 377
RK ETFC V+++Y R + N +K + P N+ A N G+++A
Sbjct: 161 RKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFN----GLLSALCKS 216
Query: 378 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 437
KA + + M + Y +L+ + KE +A + E+ +G D+ TY
Sbjct: 217 KNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTY 275
Query: 438 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY-LTIMTGLMENHRPELMAAFLDEVV 496
+++ + A + R M + Y + + T EN E + FL+
Sbjct: 276 SIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMER 335
Query: 497 GDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 542
+ +V +NS+I AFCKA R+++ R + M PN ++
Sbjct: 336 SGMKADVAV--FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKS 379
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 7/187 (3%)
Query: 366 IGYGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVME 424
+ Y I V+ G D+A I+ M+ +Y ++ Y ENR EA +E
Sbjct: 273 VTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLE 332
Query: 425 ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMEN-H 483
+ SG++ DV +++LI + ++ + + ++M+ V S I+ L+E
Sbjct: 333 MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGE 392
Query: 484 RPELMAAFLDEV-VGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQT 542
+ E F + V +P + T +I FC+ +E A + ++ M P+ T
Sbjct: 393 KDEAFDVFRKMIKVCEPDADTYTM----VIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 448
Query: 543 YLSLING 549
+ LING
Sbjct: 449 FSVLING 455
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 135/339 (39%), Gaps = 14/339 (4%)
Query: 214 PDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE 273
PD A C L C E V A M +LG +P+ + F L KG ++ E
Sbjct: 250 PDNATCTLILTALC-ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFE 308
Query: 274 LEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVV 333
+ M G ++ LI G K G L+ + + K T+ +++
Sbjct: 309 MLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP---NVHTYTSMI 365
Query: 334 KEYLRKGNIKGLANLIN--EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMN 391
Y ++ + L + + Q L P N+ ++ +N G +A+ +++ M
Sbjct: 366 GGYCKEDKLNRAEMLFSRMKEQGLFP-NVNTYTTL----INGHCKAGSFGRAYELMNLMG 420
Query: 392 ALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQ 451
G + Y + + CK++R EA L+ + S GL+ D TY LI+ D
Sbjct: 421 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 480
Query: 452 SAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 510
A + F M + D++ + + I + E F ++V + + S
Sbjct: 481 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF--QLVVSLGLIPTKETYTS 538
Query: 511 IIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING 549
+I +CK G ++ A + F M P+ TY SLI+G
Sbjct: 539 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 114/282 (40%), Gaps = 16/282 (5%)
Query: 351 EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC 410
+ Q L PS+I + ++ V +GL + A ++ DEM+ G Y ++
Sbjct: 174 QNQGLTPSSITMN-----CVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCF 228
Query: 411 KENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 470
++ + EA + + G D T ++ + A FR M +
Sbjct: 229 RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLI 288
Query: 471 SYLTIMTGLMENHRPELMAAFLDEVVGDP-RIEVGTHDWNSIIHAFCKAGRLEDARRTFR 529
++ +++ GL + + L+E+V + + V TH ++I CK G E A R F
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH--TALIDGLCKRGWTEKAFRLFL 346
Query: 530 RM-NFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAF 588
++ ++PN TY S+I GY +K ML++ +K +G+ + N
Sbjct: 347 KLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK-------EQGLFPNVNTYTTL 399
Query: 589 LYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKK 630
+ K G F A +++ + + + Y A KK
Sbjct: 400 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKK 441
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 28/282 (9%)
Query: 245 NLGVRPDELTFGFLGYLYAVKGLQEKIN---ELEVL--MGEFGCSNKKVFYSNLISGYVK 299
++ +RP+ ++F L +KG +K + +V M E V Y++LI +
Sbjct: 179 DMRLRPNSVSFNIL-----IKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCR 233
Query: 300 SGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKL---- 355
+ ++ +S L D +K TF ++K KG NEA+KL
Sbjct: 234 NDDMGKAKSL----LEDMIKKRIRPNAVTFGLLMKGLCCKGEY-------NEAKKLMFDM 282
Query: 356 EPSNIKADNSIGYGIVNACVS-MGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENR 414
E K + YGI+ + + G D+A +L EM + +Y ++ C E R
Sbjct: 283 EYRGCKP-GLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR 341
Query: 415 TAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLT 474
EA ++ E+ G + + TY +I+ +DF S ++ M +R +++
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVC 401
Query: 475 IMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFC 516
++ GL++ + A F+ EV+G + G+ W +++ C
Sbjct: 402 MVAGLIKGGNLD-HACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 172/412 (41%), Gaps = 49/412 (11%)
Query: 99 KPLTNSLITHLSSLGDIHN-LKRAFASAVFLMERNPMVLESETIHAMLDSMKGANTAAPA 157
KP +N L+ + L + N + AF V+ ++ V H+M+ + A
Sbjct: 124 KP-SNELVVEI--LSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTA 180
Query: 158 FALVRCMFKNRYFVPFAMWGNVLVEIIRKSG---NLAAFLPVFEESCRVALDEKLEFMKP 214
+ L+ M R F P + L+ +IRK ++ + F R KLE
Sbjct: 181 WTLIDEM---RKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRF----KLEMGID 233
Query: 215 DVAACNAALEGCCCELESVTDAERVVGTMSNLGVRP-DELTFGFL--GYLYAVKGLQEKI 271
D + +AL C ++V+DA ++ N P D +F + G+ + G +
Sbjct: 234 DFQSLLSAL----CRYKNVSDAGHLI--FCNKDKYPFDAKSFNIVLNGWCNVI-GSPREA 286
Query: 272 NELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILR---SLSDEDRKDWNFGGET 328
+ + MG G + V YS++IS Y K G+L + R + DRK +N
Sbjct: 287 ERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYN----- 341
Query: 329 FCAVVKEYLRKGNIKGLANLIN---EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHS 385
AVV + + NL+ E + +EP N+ NS+ + +++A
Sbjct: 342 --AVVHALAKASFVSEARNLMKTMEEEKGIEP-NVVTYNSL----IKPLCKARKTEEAKQ 394
Query: 386 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI-LVMEISSSGLQLDVETYDALIETS 444
+ DEM GL I A+ + RT E L+ ++ G + VETY LI
Sbjct: 395 VFDEM----LEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKL 450
Query: 445 MSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEV 495
+DF + L+ +M+E V PDL SY+ ++ GL N + E + E+
Sbjct: 451 CRWRDFDNVLLLWDEMKEKTVGPDL-SSYIVMIHGLFLNGKIEEAYGYYKEM 501
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 170/459 (37%), Gaps = 100/459 (21%)
Query: 194 LPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAERVVGTMSNLGVRPDEL 253
LP +C V L +M+P VA C L C S+ D+E+V T SN + D+
Sbjct: 28 LPSLSNNCIVRL-----YMEPPVA-CVLPLGLCSMFSTSIADSEQVGFTRSN--IEKDDE 79
Query: 254 TFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRS 313
+ LG + + + E + ++ L+ + G S++K + L VK N +E IL
Sbjct: 80 SDIDLGCSISDELVSEDVGKISKLVKDCG-SDRKELRNKLEECDVKPSNELVVE--ILSR 136
Query: 314 LSDEDRKDWN-------FGG--ETFCAVVKEYLRKGNIKGLA-------NLINEAQKLEP 357
+ R DW + G + + V+EY +I G LI+E +K P
Sbjct: 137 V----RNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSP 192
Query: 358 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 417
S + + ++ I C + KA + +G+ + +L A C+ ++
Sbjct: 193 SLVNS-QTLLIMIRKYCAVHDVG-KAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSD 250
Query: 418 ATILV-----------------------------------MEISSSGLQLDVETYDALIE 442
A L+ ME+ + G++ DV +Y ++I
Sbjct: 251 AGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMIS 310
Query: 443 TSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIE 502
LF M++ + + Y ++ L + + + + IE
Sbjct: 311 CYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIE 370
Query: 503 VGTHDWNSIIHAFCKAGRLEDARRTFR--------------------------------R 530
+NS+I CKA + E+A++ F +
Sbjct: 371 PNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAK 430
Query: 531 MNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRK 569
M + EP +TY+ LI NVL+LW+++K K
Sbjct: 431 MRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEK 469
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 109/245 (44%), Gaps = 42/245 (17%)
Query: 381 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 440
D+ + EM++LG + + ++ ++CKE++ EA + + G+ +V +++ +
Sbjct: 200 DRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMM 259
Query: 441 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR 500
I+ + + D + A L ++ + G++++ P +
Sbjct: 260 IDGACKTGDMRFALQLL-----GKMGMMSGNFVS----------PNAVT----------- 293
Query: 501 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVL 560
+NS+I+ FCKAGRL+ A R M + N++TY +L++ Y A L
Sbjct: 294 -------YNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 561 MLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRY 620
L +++ KG+ + + ++ +Y + G + AM V+ + + +D R+
Sbjct: 347 RLCDEMT-------SKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQID--RF 397
Query: 621 KQAFM 625
QA +
Sbjct: 398 TQAIV 402
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 385 SILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 444
S++D+M A + + I + Y + + EA ++ G +++ ++ +++T
Sbjct: 149 SLVDDMKA-KKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTL 207
Query: 445 MSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEV---VGDPR 500
S++ A +F M++ R PD+K SY T L+E EL +DEV + D
Sbjct: 208 SKSRNVGDAQKVFDKMKKKRFEPDIK-SY----TILLEGWGQELNLLRVDEVNREMKDEG 262
Query: 501 IEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFN 558
E + II+A CKA + E+A R F M +P+ + SLING + +EK N
Sbjct: 263 FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLING-LGSEKKLN 319
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 102/248 (41%), Gaps = 8/248 (3%)
Query: 310 ILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYG 369
++ SL D+ + ETF + + Y R +K I K+E K ++S
Sbjct: 146 LIWSLVDDMKAKKLLSKETFALISRRYARARKVK---EAIGAFHKMEEFGFKMESSDFNR 202
Query: 370 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
+++ A + D+M + Y +L+ + +E + E+ G
Sbjct: 203 MLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEG 262
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 489
+ DV Y +I ++ ++ A F +M + + +++ GL +
Sbjct: 263 FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL 322
Query: 490 AFLD--EVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLI 547
F + + G P +E T +N+++ A+C + R+EDA +T M PN +TY ++
Sbjct: 323 EFFERSKSSGFP-LEAPT--YNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
Query: 548 NGYVSAEK 555
+ + ++
Sbjct: 380 HHLIRMQR 387
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 153/384 (39%), Gaps = 34/384 (8%)
Query: 162 RCMFKNRYFVPFAMWGNVLVEIIRKSGNL---AAFLPV-FEESCRVALDEKLEFMKPDVA 217
R M RYF G VE R + NL FL + E + R D K + PD A
Sbjct: 235 RYMMAKRYFNKMVSEG---VEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDA 291
Query: 218 ACNAALEGCCCELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELE 275
N + G C + + +AE++ M + P +++ + GYL AV + + + E
Sbjct: 292 TFNTMINGFC-RFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYL-AVDRVDDGLRIFE 349
Query: 276 VLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKE 335
M G YS L+ G +G + ++ + ++ N F ++
Sbjct: 350 E-MRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDN---SIFLKLLVS 405
Query: 336 YLRKGNIKGLANLINEAQKLEPSNIKAD-NSIGYGIVNACVSMGLSDKAHSILDEMNALG 394
+ G++ ++ L N+ A+ G I N C + ++A +LD + +
Sbjct: 406 QSKAGDMAAATEVLKAMATL---NVPAEAGHYGVLIENQCKASAY-NRAIKLLDTL--IE 459
Query: 395 GSVGL----------GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETS 444
+ L Y PI++ C +TA+A +L ++ G+Q D + + LI
Sbjct: 460 KEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGH 518
Query: 445 MSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVG 504
+ S++ + + M VP +Y ++ M P LD +V D +
Sbjct: 519 AKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDS 578
Query: 505 THDWNSIIHAFCKAGRLEDARRTF 528
+ + S+I + + GR++ A R
Sbjct: 579 SL-FRSVIESLFEDGRVQTASRVM 601
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 401 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM 460
++ ++K + ++ A +++++ G+ D + + LIE+ + Q + +F+ M
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 461 REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGR 520
++ V SY ++ ++ R + + +++V + +E H +N ++ F + R
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEG-VEPTRHTYNLMLWGFFLSLR 270
Query: 521 LEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 555
LE A R F M P+D T+ ++ING+ +K
Sbjct: 271 LETALRFFEDMKTRGISPDDATFNTMINGFCRFKK 305
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 406 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 465
+ +CK NR EA + E+ G + V +Y +I +F + + +M
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 466 PDLKGSYLTIMTGLMENHRPELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 524
P +Y TIM+ L N + E A + + + + +N +IH +AGRLE+A
Sbjct: 291 PPNSITYTTIMSSL--NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
Query: 525 RRTFR-RMNFLQFEPNDQTYLSLINGY 550
R FR M L N TY S+I Y
Sbjct: 349 ERVFRVEMPELGVSINTSTYNSMIAMY 375
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 406 LKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV 465
+ +CK NR EA + E+ G + V +Y +I +F + + +M
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 466 PDLKGSYLTIMTGLMENHRPELMAAF-LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDA 524
P +Y TIM+ L N + E A + + + + +N +IH +AGRLE+A
Sbjct: 291 PPNSITYTTIMSSL--NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
Query: 525 RRTFR-RMNFLQFEPNDQTYLSLINGY 550
R FR M L N TY S+I Y
Sbjct: 349 ERVFRVEMPELGVSINTSTYNSMIAMY 375
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 136/347 (39%), Gaps = 21/347 (6%)
Query: 290 YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLI 349
++ L+ K G + E+ +LR + + D N TF + + R + K L+
Sbjct: 237 FNMLLDALCKCGLVKEGEA-LLRRMRHRVKPDAN----TFNVLFFGWCRVRDPKKAMKLL 291
Query: 350 NEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGL---GVYIPIL 406
E + + K +N ++ G+ D+A + D M G +V + ++
Sbjct: 292 EE---MIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMI 348
Query: 407 KAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVP 466
A K ++ E L+ + S+G DV TY +IE ++ A+ +M P
Sbjct: 349 VALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 408
Query: 467 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 526
+Y + L EN + + +V + R +N +I F + + A
Sbjct: 409 PDIVTYNCFLRVLCENRKTDEALKLYGRMV-ESRCAPSVQTYNMLISMFFEMDDPDGAFN 467
Query: 527 TFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVD 586
T+ M+ + +TY ++ING + L +V +KG+K + + D
Sbjct: 468 TWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEV-------VNKGLKLPYRVFD 520
Query: 587 AFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKKLKV 633
+FL + + G A +V E H K + + A E K K+
Sbjct: 521 SFLMRLSEVGNLKAIHKVSE--HMKKFYNHSMARRFALSEKRKSTKL 565
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 127/326 (38%), Gaps = 56/326 (17%)
Query: 233 VTDAERVVGTMSNLGVRPDELTFG-FLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYS 291
V A V+ M G PDE FG L L +++ E + F + + +++
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLR--YFT 256
Query: 292 NLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINE 351
+L+ G+ + G + + +++ +NE
Sbjct: 257 SLLYGWCRVGKMMEAKYVLVQ------------------------------------MNE 280
Query: 352 AQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 411
A EP + N + G NA G A+ +L +M G Y +++A CK
Sbjct: 281 AG-FEPDIVDYTNLLS-GYANA----GKMADAYDLLRDMRRRGFEPNANCYTVLIQALCK 334
Query: 412 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKG 470
+R EA + +E+ + DV TY AL+ + + DM ++ +P
Sbjct: 335 VDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMP---- 390
Query: 471 SYLTIMTGLMENHRPELMAAFLDEVVGDPRIE----VGTHDWNSIIHAFCKAGRLEDARR 526
S LT M ++ + + E L+ + +IE +G +N +I CK G +++A R
Sbjct: 391 SELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGI--YNVVIRLACKLGEVKEAVR 448
Query: 527 TFRRMNFLQFEPNDQTYLSLINGYVS 552
+ M P T++ +ING S
Sbjct: 449 LWNEMEENGLSPGVDTFVIMINGLAS 474
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 147/385 (38%), Gaps = 49/385 (12%)
Query: 204 ALDEKLEF-MKPDVAACNAALEGCCCELESVTDAERVVGTMS-NLGVRPDELTFGFLGYL 261
LDE +F +PD L+ C + SV DA ++ M V T G+
Sbjct: 205 VLDEMPKFGFEPDEYVFGCLLDALC-KHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWC 263
Query: 262 YAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKD 321
K ++ K + V M E G V Y+NL+SGY +G +A L D R+
Sbjct: 264 RVGKMMEAKY--VLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDL----LRDMRRRG 317
Query: 322 WNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSD 381
+ + +++ + ++ + E ++ E +AD +V+ G D
Sbjct: 318 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYE---CEADVVTYTALVSGFCKWGKID 374
Query: 382 KAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALI 441
K + +LD+M G Y+ I+ A+ K+ E L+ ++ D+ Y+ +I
Sbjct: 375 KCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVI 434
Query: 442 ETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLME--------NHRPEL------ 487
+ + + A L+ +M E + +++ ++ GL +H E+
Sbjct: 435 RLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF 494
Query: 488 -------MAAFLDEVVGDPRIEVGTHDWNSI----------------IHAFCKAGRLEDA 524
+ L+ V+ D ++E+ W+ I IHA G ++A
Sbjct: 495 SVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEA 554
Query: 525 RRTFRRMNFLQFEPNDQTYLSLING 549
M + F P T+ L+ G
Sbjct: 555 CSYCIEMIEMDFMPQPDTFAKLMKG 579
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 179/438 (40%), Gaps = 46/438 (10%)
Query: 209 LEFMKPDVAACNAALEGCCCEL-ESVTDAERVVGTMSNL---GVRPDELTFGFLGYLYAV 264
L+ M+ D + + L EL + D + + S L G+ PD + + + +Y
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 265 KGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNF 324
L + L M E G V YS L+S YV++ S + K+ N
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVF------AEMKEVNC 326
Query: 325 GGE-TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKAD---NSIGYG-IVNACVSMGL 379
+ T C ++ ++ G +++ EA +L S K D N + Y I+ L
Sbjct: 327 ALDLTTCNIMI------DVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAEL 380
Query: 380 SDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDA 439
+A + M + Y ++K Y K +AT LV E+ S G++ + TY
Sbjct: 381 FGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYST 440
Query: 440 LIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIM-----TGLMENHRPELMAAFLDE 494
+I + A +LF+ +R + V + Y T++ GLM + + L L +
Sbjct: 441 IISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPD 500
Query: 495 VVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPND-QTYLSLINGYVSA 553
+ PR + I KAGR E+A FR+ F E D + +IN Y
Sbjct: 501 NI--PR--------ETAITILAKAGRTEEATWVFRQA-FESGEVKDISVFGCMINLYSRN 549
Query: 554 EKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVV-EKSHEMK 612
+++ NV+ +V K+ + G+ D N++ L A K F+ A V E E
Sbjct: 550 QRYVNVI----EVFEKMRTAGYFP---DSNVIAMVLNAYGKQREFEKADTVYREMQEEGC 602
Query: 613 IFVDKWRYKQAFMETHKK 630
+F D+ ++ + + KK
Sbjct: 603 VFPDEVHFQMLSLYSSKK 620
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 143/335 (42%), Gaps = 18/335 (5%)
Query: 238 RVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGY 297
RV M + G PD TF L Y G + +++ M G + Y+ L++
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 298 VKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGN---IKGLANLINEAQK 354
+ G+ S E+ I SD K + ++ +++ Y + GN I+ + N I E Q
Sbjct: 537 ARKGDWRSGENVI----SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQ- 591
Query: 355 LEPSNIKADNSIGYGIVN-ACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKEN 413
+ PS + + + N C ++ S++A ++ + G + ++ +L + + N
Sbjct: 592 IFPSWMLLRTLL---LANFKCRALAGSERAFTLFKKH---GYKPDMVIFNSMLSIFTRNN 645
Query: 414 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSY 472
+A ++ I GL D+ TY++L++ + + A + + + ++++ PDL SY
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLV-SY 704
Query: 473 LTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMN 532
T++ G + L E+ + I +N+ + + G + M
Sbjct: 705 NTVIKGFCRRGLMQEAVRMLSEMT-ERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
Query: 533 FLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVK 567
PN+ T+ +++GY A K+ + + +K
Sbjct: 764 KNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 22/264 (8%)
Query: 297 YVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLE 356
YV+ GN+ T L ++ + + CA+V + ++ +G A EA K+
Sbjct: 328 YVREGNM----ETTLEVVAAMRKAELKVTDCILCAIVNGFSKQ---RGFA----EAVKVY 376
Query: 357 PSNIKADNSIG---YGI-VNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKE 412
+K + G Y I +NA + +KA + DEM G + Y I+ Y K
Sbjct: 377 EWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKT 436
Query: 413 NRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSY 472
R ++A L+ ++ G + ++ Y++LI+ + D + A ++++M+ A+V K SY
Sbjct: 437 RRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSY 496
Query: 473 LTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDW---NSIIHAFCKAGRLEDARRTFR 529
++++ N EL E+ + R+ G D ++ F K R+++ R +
Sbjct: 497 TSMISAY--NRSKELERCV--ELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQ 552
Query: 530 RMNFLQFEPNDQTYLSLINGYVSA 553
M + + Y S +N A
Sbjct: 553 DMKVEGTRLDARLYSSALNALRDA 576
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 120/300 (40%), Gaps = 15/300 (5%)
Query: 254 TFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASMESTILRS 313
TF L Y GL + M ++GC K+ +S +IS + AS + S
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRR-ASEAQSFFDS 246
Query: 314 LSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQ--KLEPSNIKADNSIGYGIV 371
L D D + +V+ + R G I + E + +EP N Y IV
Sbjct: 247 LKDRFEPDVI----VYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP------NVYTYSIV 296
Query: 372 -NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGL 430
+A G +AH + +M G + + +++ + K RT + + ++ G
Sbjct: 297 IDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGC 356
Query: 431 QLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAA 490
+ D TY+ LIE ++ ++A + M + + ++ S + +E R A
Sbjct: 357 EPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC-EVNASTFNTIFRYIEKKRDVNGAH 415
Query: 491 FLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
+ + + + E T +N ++ F + + + + M+ + EPN TY L+ +
Sbjct: 416 RMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMF 475
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 19/226 (8%)
Query: 413 NRTAEATILVME--ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 470
N+ ++ ILV E + S Q DV ++ LI+ ++ A SL+ + E+R +
Sbjct: 154 NKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED 213
Query: 471 SYLTI-----MTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCK-AGRLEDA 524
+Y + M GL+E R E++ + P+ +G +N+ I K G E+A
Sbjct: 214 TYALLIKAYCMAGLIE--RAEVVLVEMQNHHVSPKT-IGVTVYNAYIEGLMKRKGNTEEA 270
Query: 525 RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNL 584
F+RM + +P +TY +IN Y A K + M W S I L
Sbjct: 271 IDVFQRMKRDRCKPTTETYNLMINLYGKASKSY---MSWKLYCEMRSHQCKPNICTYTAL 327
Query: 585 VDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKK 630
V+AF + G + A ++ E+ E + D + Y A ME++ +
Sbjct: 328 VNAF----AREGLCEKAEEIFEQLQEDGLEPDVYVY-NALMESYSR 368
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 136/332 (40%), Gaps = 38/332 (11%)
Query: 289 FYSNLISGYVKSGNLASMEST------ILRSLSDEDRKDWNFGGETFCAVVKEYLRK--- 339
F+++++ Y G++A + T IL+S + ++ G TF ++ R
Sbjct: 87 FHNSVLQSY---GSIAVVNDTVKLFQHILKS-----QPNFRPGRSTFLILLSHACRAPDS 138
Query: 340 --GNIKGLANL-INEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGS 396
N+ + NL +N LEP + D + V + G D+A ++ E+
Sbjct: 139 SISNVHRVLNLMVNNG--LEPDQVTTDIA-----VRSLCETGRVDEAKDLMKELTEKHSP 191
Query: 397 VGLGVYIPILKAYCKENRTAEATILVMEISSS-GLQLDVETYDALIETSMSSQDFQSAFS 455
Y +LK CK V E+ ++ D+ ++ LI+ +S++ + A
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 456 LFRDMREARVPDLKGSYLTIMTGLME-NHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHA 514
L + A Y TIM G + E + + + + + +E +N++I
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVY--KKMKEEGVEPDQITYNTLIFG 309
Query: 515 FCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDG 574
KAGR+E+AR + M +EP+ TY SL+NG + L L +++
Sbjct: 310 LSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEME------- 362
Query: 575 HKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 606
+G + + L+ + K D M++ E
Sbjct: 363 ARGCAPNDCTYNTLLHGLCKARLMDKGMELYE 394
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 80/194 (41%), Gaps = 14/194 (7%)
Query: 405 ILKAYCKENRTAEATI-LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 463
++KA C+ + T +A + + +E+ G D TY LI A LF +M E
Sbjct: 162 LIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221
Query: 464 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 523
+Y +++ GL + + +L+E+ IE ++S++ CK GR
Sbjct: 222 DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM-KSKGIEPNVFTYSSLMDGLCKDGRSLQ 280
Query: 524 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN 583
A F M PN TY +LI G +K + L + +++ G K
Sbjct: 281 AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLD----RMNLQGLKP------ 330
Query: 584 LVDAFLYAMVKGGF 597
DA LY V GF
Sbjct: 331 --DAGLYGKVISGF 342
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 19/226 (8%)
Query: 413 NRTAEATILVME--ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 470
N+ ++ ILV E + S Q DV ++ LI+ ++ A SL+ + E+R +
Sbjct: 132 NKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED 191
Query: 471 SYLTI-----MTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCK-AGRLEDA 524
+Y + M GL+E R E++ + P+ +G +N+ I K G E+A
Sbjct: 192 TYALLIKAYCMAGLIE--RAEVVLVEMQNHHVSPKT-IGVTVYNAYIEGLMKRKGNTEEA 248
Query: 525 RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNL 584
F+RM + +P +TY +IN Y A K + M W S I L
Sbjct: 249 IDVFQRMKRDRCKPTTETYNLMINLYGKASKSY---MSWKLYCEMRSHQCKPNICTYTAL 305
Query: 585 VDAFLYAMVKGGFFDAAMQVVEKSHEMKIFVDKWRYKQAFMETHKK 630
V+AF + G + A ++ E+ E + D + Y A ME++ +
Sbjct: 306 VNAF----AREGLCEKAEEIFEQLQEDGLEPDVYVY-NALMESYSR 346
>AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:338538-339905 FORWARD
LENGTH=409
Length = 409
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 229 ELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGL----QEKINELEVLMGEFGCS 284
+L V DAER + +M N G D++T + LY+ G +E NE+++L
Sbjct: 177 KLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFNEIKLLGEPLDYR 236
Query: 285 NKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKG 344
+ Y ++I Y+++G ES +LR + D ++ G E + A++++Y G+ +G
Sbjct: 237 S----YGSMIMAYIRAGVPEKGES-LLREM---DSQEICAGREVYKALLRDYSMGGDAEG 288
Query: 345 LANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIP 404
+ + Q + I D + ++NA G S A + M G
Sbjct: 289 AKRVFDAVQ---IAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKCVAL 345
Query: 405 ILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIE 442
+L AY KE + EA ++E+ + L E L +
Sbjct: 346 VLAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLAQ 383
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 381 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 440
DKA IL M GG Y I+ CK+ A +L+ ++S SG DV TY+ +
Sbjct: 156 DKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTV 215
Query: 441 IETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPR 500
I + + A ++D + P +Y T++ L+ + A EV+ D
Sbjct: 216 IRCMFDYGNAEQAIRFWKDQLQNGCPPFMITY-TVLVELVCRYCGSARAI---EVLEDMA 271
Query: 501 IEVGTHD---WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHF 557
+E D +NS+++ C+ G LE+ + + E N TY +L++ S E
Sbjct: 272 VEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHE--- 328
Query: 558 NVLMLWNDVKRKLS 571
W++V+ L+
Sbjct: 329 ----YWDEVEEILN 338
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Query: 429 GLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELM 488
G++ D+ETY+ +I+ S S++S+ +M + S+ +++G + + +
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 489 AAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLIN 548
L ++ D + +G +N I + CK + ++A+ M +PN TY LI+
Sbjct: 242 GKVL-AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIH 300
Query: 549 GYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKS 608
G+ + + + + K+ ++G K D +Y + KGG F+ A+ + ++S
Sbjct: 301 GFCNEDD-------FEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKES 353
Query: 609 HE 610
E
Sbjct: 354 ME 355
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 5/177 (2%)
Query: 380 SDKAHSILDEMNALGG--SVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETY 437
S + + AL G SV Y IL +C RT +A ++ E+ G+ ++ TY
Sbjct: 174 SKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTY 233
Query: 438 DALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVG 497
+ +++ + + A+ F +M++ +Y T++ G + DE++
Sbjct: 234 NTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIR 293
Query: 498 DPRI-EVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 553
+ + V T +N++I CK +E+A F M +EPN TY LI G A
Sbjct: 294 EGVLPSVAT--YNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 121/314 (38%), Gaps = 48/314 (15%)
Query: 239 VVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYV 298
++ M +L + P TF + YA G +K +L + M E GC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQ------------- 159
Query: 299 KSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPS 358
+LAS +TIL L R + + E F A+ +
Sbjct: 160 ---DLASF-NTILDVLCKSKRVEKAY--ELFRALRGRF---------------------- 191
Query: 359 NIKADNSIGYGIV-NACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 417
+ +++ Y ++ N + + KA +L EM G + L Y +LK + + +
Sbjct: 192 ---SVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRH 248
Query: 418 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIM 476
A +E+ ++DV TY ++ + + + A ++F +M RE +P + +Y ++
Sbjct: 249 AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV-ATYNAMI 307
Query: 477 TGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQF 536
L + E +E+V E +N +I AG +RM
Sbjct: 308 QVLCKKDNVENAVVMFEEMVRRG-YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGC 366
Query: 537 EPNDQTYLSLINGY 550
EPN QTY +I Y
Sbjct: 367 EPNFQTYNMMIRYY 380
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 408 AYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREAR-VP 466
+C ++ E + ++ G + D+ TY+ L+ + + AF L++ M R VP
Sbjct: 245 VFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVP 304
Query: 467 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 526
DL +Y +++ GL ++ R +V D I+ +N++I+A+CK G ++ +++
Sbjct: 305 DLV-TYTSLIKGLCKDGRVREAHQTFHRMV-DRGIKPDCMSYNTLIYAYCKEGMMQQSKK 362
Query: 527 TFRRMNFLQFEPNDQTYLSLINGYV 551
M P+ T ++ G+V
Sbjct: 363 LLHEMLGNSVVPDRFTCKVIVEGFV 387
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 15/248 (6%)
Query: 378 GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSS-GLQLDVET 436
G+++ AH + DEM L + + +L AY + EA E+ G+ D+ T
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 437 YDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAA--FLD 493
Y+ +I+ S+F ++ + PDL ++ T L E +R EL +
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDL----ISFNTLLEEFYRRELFVEGDRIW 251
Query: 494 EVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSA 553
+++ + +NS + + + DA M P+ TY +LI Y
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVD 311
Query: 554 EKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEMKI 613
V+ +N++K KG+ D + + K G D A++V E++ + K+
Sbjct: 312 NNLEEVMKCYNEMK-------EKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKL 364
Query: 614 FVDKWRYK 621
YK
Sbjct: 365 LSRPNMYK 372
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 147/361 (40%), Gaps = 56/361 (15%)
Query: 233 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINE---LEVLMGEFGCSNKKVF 289
V+ AE + + LG+R +E T + L AV G Q K+ E L + GE K V
Sbjct: 651 VSKAEMIADIIIRLGLRMEEET---IATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVI 707
Query: 290 YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKG--------- 340
S +I YV+ G L + S K + G T +V +G
Sbjct: 708 RS-MIDAYVRCGWLEDAYGLFMESAE----KGCDPGAVTISILVNALTNRGKHREAEHIS 762
Query: 341 ------NIK----GLANLIN---EAQKLE--------------PSNIKADNSIGYGIVNA 373
NI+ G LI EA KL+ P +I+ Y + +
Sbjct: 763 RTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQT-----YNTMIS 817
Query: 374 CVSMGLS-DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQL 432
GL DKA I G + +Y ++ Y K + +EA L E+ G++
Sbjct: 818 VYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKP 877
Query: 433 DVETYDALIETSMSSQDFQSAFSLFRDM-REARVPDLKGSYLTIMTGLMENHRPELMAAF 491
+Y+ +++ +S+ L + M R R DL +YLT++ E+ +
Sbjct: 878 GTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDL-STYLTLIQVYAESSQFAEAEKT 936
Query: 492 LDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYV 551
+ +V + I + ++S++ A KAG +E+A RT+ +M+ P+ +++ GY+
Sbjct: 937 IT-LVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYM 995
Query: 552 S 552
+
Sbjct: 996 T 996
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 69/167 (41%)
Query: 397 VGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSL 456
V Y+P+L+AY K EA L+ +++ G + ++ +++ +S ++ +
Sbjct: 141 VAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMV 200
Query: 457 FRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFC 516
M+ ++P SY M E + E+VGD +EVG ++ + +
Sbjct: 201 VSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYI 260
Query: 517 KAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLW 563
K+G E AR + N Y LI Y S V+ LW
Sbjct: 261 KSGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLW 307
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 3/189 (1%)
Query: 381 DKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDAL 440
++A ++L + LG + Y ++K Y + EA + + +G++ DV TY++L
Sbjct: 30 ERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSL 89
Query: 441 IETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDP 499
I + + LF +M + + PD+ SY T+M+ + R L E +
Sbjct: 90 ISGAAKNLMLNRVLQLFDEMLHSGLSPDM-WSYNTLMSCYFKLGRHGEAFKILHEDIHLA 148
Query: 500 RIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNV 559
+ G +N ++ A CK+G ++A F+ + + +P TY LING + + +V
Sbjct: 149 GLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSV 207
Query: 560 LMLWNDVKR 568
+ ++K+
Sbjct: 208 DWMMRELKK 216
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 115/285 (40%), Gaps = 51/285 (17%)
Query: 328 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 387
T+ ++K Y R G+ +++ + I+ D + +++ + ++ +
Sbjct: 50 TYNTLIKGYTR---FIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLF 106
Query: 388 DEMNALGGSVGLGVYIPILKAYCKENRTAEA-TILVMEISSSGLQLDVETYDALIETSMS 446
DEM G S + Y ++ Y K R EA IL +I +GL ++TY+ L++
Sbjct: 107 DEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCK 166
Query: 447 SQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTH 506
S +A LF+ ++ +RV +PELM
Sbjct: 167 SGHTDNAIELFKHLK-SRV------------------KPELMT----------------- 190
Query: 507 DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDV 566
+N +I+ CK+ R+ R + + PN TY +++ Y ++ L L+ +
Sbjct: 191 -YNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM 249
Query: 567 KRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVEKSHEM 611
K+ +G FD A + A++K G A + E HE+
Sbjct: 250 KK-------EGYTFDGFANCAVVSALIKTG---RAEEAYECMHEL 284
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 149/387 (38%), Gaps = 34/387 (8%)
Query: 228 CELESVTDAERVVGTMSNLGVRPDELTFGFL--GYLYAVKGLQEKINELEVLMGEFGCSN 285
C+ ++ AE ++ LGV PD +T+ L GY + G+ E + M E G
Sbjct: 24 CKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFI-GIDEAY-AVTRRMREAGIEP 81
Query: 286 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKD-WNFGGETFCAVVKEYLRKGNIKG 344
Y++LISG K+ L + L D W++ C Y + G
Sbjct: 82 DVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSC-----YFKLGRHGE 136
Query: 345 LANLINEAQKLEPSNIKADNSIGYGIV-NACVSMGLSDKAHSILDEMNALGGSVGLGVYI 403
+++E L D Y I+ +A G +D A + + + L Y
Sbjct: 137 AFKILHEDIHLAGLVPGIDT---YNILLDALCKSGHTDNAIELFKHLKSRVKP-ELMTYN 192
Query: 404 PILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREA 463
++ CK R ++ E+ SG + TY +++ ++ + LF M++
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 464 RVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 523
+ +++ L++ R E + E+V +N++++ + K G L+
Sbjct: 253 GYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDA 312
Query: 524 ARRTFRRMNFLQFEPNDQTYLSLINGYVS------AEKHFNVLMLWNDVKRKLSSDGHKG 577
+ +P+D T+ ++NG ++ AEKH L+ G G
Sbjct: 313 VDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKH-------------LACIGEMG 359
Query: 578 IKFDHNLVDAFLYAMVKGGFFDAAMQV 604
++ + + + K G D AM++
Sbjct: 360 MQPSVVTCNCLIDGLCKAGHVDRAMRL 386
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 5/216 (2%)
Query: 344 GLANLINEA----QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGL 399
G AN +NEA +++ + K D +++ G D A + M A G S
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 400 GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 459
Y I+ K A L E+ G ++ TY+ +++ ++++Q+A L+RD
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 460 MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAG 519
M+ A K +Y +M L E A E+ I + ++ + KAG
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP-DEPVYGLLVDLWGKAG 588
Query: 520 RLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 555
+E A + ++ M PN T SL++ ++ K
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 15/221 (6%)
Query: 344 GLANLINEA----QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGL 399
G AN +NEA +++ + K D +++ G D A + M A G S
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 400 GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 459
Y I+ K A L E+ G ++ TY+ +++ ++++Q+A L+RD
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 460 MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV-----VGDPRIEVGTHDWNSIIHA 514
M+ A K +Y +M L E A E+ + D + + ++
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV------YGLLVDL 583
Query: 515 FCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 555
+ KAG +E A + ++ M PN T SL++ ++ K
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 15/221 (6%)
Query: 344 GLANLINEA----QKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGL 399
G AN +NEA +++ + K D +++ G D A + M A G S
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 400 GVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRD 459
Y I+ K A L E+ G ++ TY+ +++ ++++Q+A L+RD
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 460 MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEV-----VGDPRIEVGTHDWNSIIHA 514
M+ A K +Y +M L E A E+ + D + + ++
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV------YGLLVDL 583
Query: 515 FCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEK 555
+ KAG +E A + ++ M PN T SL++ ++ K
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 97/241 (40%), Gaps = 17/241 (7%)
Query: 370 IVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSG 429
I+ +G K +M+ G + L Y + CK + +A L E+ S
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 254
Query: 430 LQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMA 489
++LDV Y+ +I +SQ + +FR+MRE ++ TI+ L E+ R
Sbjct: 255 MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAY 314
Query: 490 AFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRT---FRRMNFLQFEPNDQTYLSL 546
LDE+ P+ G +SI + C RLE F RM P TY+ L
Sbjct: 315 RMLDEM---PK--RGCQP-DSITY-MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVML 367
Query: 547 INGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQVVE 606
+ + VL +W +K G D +A + A+++ G D A + E
Sbjct: 368 MRKFERWGFLQPVLYVWKTMK-------ESGDTPDSAAYNAVIDALIQKGMLDMAREYEE 420
Query: 607 K 607
+
Sbjct: 421 E 421
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 402 YIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM- 460
Y I+ CK + EA + + SGLQ DV+TY+ +I S A L+ +M
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFS----SLGRAEKLYAEMI 72
Query: 461 REARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGR 520
R VPD +Y +++ GL + ++ + ++ +N++I+ +CKA R
Sbjct: 73 RRGLVPDTI-TYNSMIHGLCKQNK----------LAQARKVSKSCSTFNTLINGYCKATR 121
Query: 521 LEDARRTFRRMNFLQFEPNDQTYLSLINGY 550
++D F M N TY +LI+G+
Sbjct: 122 VKDGMNLFCEMYRRGIVANVITYTTLIHGF 151
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 171/384 (44%), Gaps = 33/384 (8%)
Query: 233 VTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSN 292
+ DA + M GV D +TF + + G + L M E G S Y+
Sbjct: 321 LNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNI 380
Query: 293 LISGYVKSGNL-ASMESTILRSLSDEDRKDWNFGGE-TFCAVVKEYLRKGNIKGLANLIN 350
L+S + +G++ A++E R + RK F T AV+ ++ + + +I
Sbjct: 381 LLSLHADAGDIEAALE--YYRKI----RKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIA 434
Query: 351 EAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILD--EMNALGGSVGLGVYIPILKA 408
E ++ ++I+ D I+ V+ GL +A ++ + +++ + S L I +
Sbjct: 435 E---MDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDV--- 488
Query: 409 YCKENRTAEA-TILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR-EARVP 466
Y ++ EA T+ + + SG + DV Y+ +I+ ++ + A SLF+ M+ + P
Sbjct: 489 YAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWP 548
Query: 467 D--LKGSYLTIMTGL-MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLED 523
D S ++ G+ + + ++A LD + G + ++I ++ + G L D
Sbjct: 549 DECTYNSLFQMLAGVDLVDEAQRILAEMLDS-----GCKPGCKTYAAMIASYVRLGLLSD 603
Query: 524 ARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHN 583
A + M +PN+ Y SLING+ + M+ ++ + H G++ +H
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAESG------MVEEAIQYFRMMEEH-GVQSNHI 656
Query: 584 LVDAFLYAMVKGGFFDAAMQVVEK 607
++ + + A K G + A +V +K
Sbjct: 657 VLTSLIKAYSKVGCLEEARRVYDK 680
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 121/313 (38%), Gaps = 42/313 (13%)
Query: 247 GVRPDELTFGFLGYLYAVKGLQ--EKINE---LEVLMGEFGCSNKKVFYSNLISGYVKSG 301
G+ D T+G L +KGL +I + L +M G + V Y+ L+ K+G
Sbjct: 177 GIHGDVYTYGIL-----MKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNG 231
Query: 302 NLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIK 361
+ S ++ + + + +N +C NE QKL S +
Sbjct: 232 KVGRARS-LMSEMKEPNDVTFNILISAYC-------------------NE-QKLIQSMVL 270
Query: 362 ADNSIGYGIVNACVSM----------GLSDKAHSILDEMNALGGSVGLGVYIPILKAYCK 411
+ G V V++ G +A +L+ + + GG V + ++K YC
Sbjct: 271 LEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCA 330
Query: 412 ENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGS 471
+ A +E+ G +VETY+ LI SA F DM+ + +
Sbjct: 331 LGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFAT 390
Query: 472 YLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD-WNSIIHAFCKAGRLEDARRTFRR 530
+ T++ GL R + L+ + + D +N +I+ F K R EDA +
Sbjct: 391 FNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLK 450
Query: 531 MNFLQFEPNDQTY 543
M L D+++
Sbjct: 451 MEKLFPRAVDRSF 463
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 3/183 (1%)
Query: 386 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 445
+L M A + +Y I+K C + EA + + G D Y +I
Sbjct: 270 VLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFC 329
Query: 446 SSQDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGT 505
SA L+ +M + + + +Y ++ G + L+ AF +E++ + GT
Sbjct: 330 EKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGY--GGT 387
Query: 506 H-DWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWN 564
N++I FC G+ ++A F+ M+ PN TY +LI G+ K L L+
Sbjct: 388 MLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYK 447
Query: 565 DVK 567
++K
Sbjct: 448 ELK 450
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 328 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 387
T+ +++ +++KG + ++++ + + AD + I+ MG +D A ++L
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQ---MFENFCAADIATYNVIIQGLGKMGRADLASAVL 688
Query: 388 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 447
D + GG + + +Y ++ A K R EAT L + S+G+ DV +Y+ +IE + +
Sbjct: 689 DRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKA 748
Query: 448 QDFQSAFSLFRDMREA 463
+ A+ + M +A
Sbjct: 749 GKLKEAYKYLKAMLDA 764
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 425 ISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMR-EARVPDLKGSYLTIMTGLMENH 483
+ GL+ DV TY++LI+ ++ + A+ L MR E PD+ +Y T++ GL
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVI-TYTTVIGGLGLIG 295
Query: 484 RPELMAAFLDEVVGDPRIEVGTHD----WNSIIHAFCKAGRLEDARRTFRRMNFLQFEPN 539
+P+ L E+ E G + +N+ I FC A RL DA + M PN
Sbjct: 296 QPDKAREVLKEMK-----EYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPN 350
Query: 540 DQTYLSLINGYVSAEKHFNVLMLWNDVKR 568
TY F VL L ND+ R
Sbjct: 351 ATTY----------NLFFRVLSLANDLGR 369
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 22/245 (8%)
Query: 328 TFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSIL 387
++ +V+K ++ I+ LA+L+N Q+L+ D +VN D A +I+
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELD---FVPDVDTYLIVVNELCKKNDRDAAFAII 570
Query: 388 DEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSS 447
D M LG + +Y I+ + K+ R EA ++ SG+Q D Y +I T +
Sbjct: 571 DAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARN 630
Query: 448 QDFQSAFSLFRDMREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGD---PRIEVG 504
A L ++ + + +Y +++G ++ E +LD+++ D P + +
Sbjct: 631 GRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVL- 689
Query: 505 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVLMLWN 564
+ ++I F K G + + F M + + Y++L++G LW
Sbjct: 690 ---YTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSG------------LWR 734
Query: 565 DVKRK 569
+ RK
Sbjct: 735 AMARK 739
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 122/283 (43%), Gaps = 34/283 (12%)
Query: 343 KGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGV- 401
+ L ++ E + + + + + ++ ACV G D A + EM GG +GV
Sbjct: 56 RQLGQIVEEVEAAKKRYGRLNTIVMNSVLEACVHCGNIDLALRMFHEMAEPGG---IGVD 112
Query: 402 ---YIPILKAYCKENRTAEATILVMEI---SSSGL-QLDVETYDALIETSMSSQDFQSAF 454
Y ILK K R EA ++ I +++G +L L++ +++ D + A
Sbjct: 113 SISYATILKGLGKARRIDEAFQMLETIEYGTAAGTPKLSSSLIYGLLDALINAGDLRRAN 172
Query: 455 SLFRD----MREARVPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNS 510
L + + P + Y +M G + + P+ LDE++ R+E +N+
Sbjct: 173 GLLARYDILLLDHGTPSVL-IYNLLMKGYVNSESPQAAINLLDEML-RLRLEPDRLTYNT 230
Query: 511 IIHAFCKAGRLEDARRTFRRM---------NFLQFEPNDQTYLSLINGYVSAEKHFNVLM 561
+IHA K G L+ A + F M +FLQ P+ TY +L+ G+ A ++
Sbjct: 231 LIHACIKCGDLDAAMKFFNDMKEKAEEYYDDFLQ--PDVVTYTTLVKGFGDATDLLSLQE 288
Query: 562 LWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMVKGGFFDAAMQV 604
++ ++K + + D A + AM+K G A+ V
Sbjct: 289 IFLEMKL------CENVFIDRTAFTAVVDAMLKCGSTSGALCV 325
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 5/235 (2%)
Query: 330 CAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDE 389
C+++ YL L + ++K E + ++ GI + S+G D+A I
Sbjct: 336 CSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKA 395
Query: 390 MNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQD 449
M G Y ++ CK R EA ++ ++ + G D++T+ LI+ + +
Sbjct: 396 MRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNE 455
Query: 450 FQSAFSLFRDMREARVPDLKGSYLTIMT-GLMENHRPELMAAFLDEVVGDPRIEVGTHDW 508
A + F +M E D+ + L ++ G + +++ E + FL E+V + ++ +
Sbjct: 456 LDKALACFANMLEKGF-DIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTY 514
Query: 509 NSIIHAFCKAGRLEDA---RRTFRRMNFLQFEPNDQTYLSLINGYVSAEKHFNVL 560
+I K + E+A + ++ N+ + YL+ A+K +VL
Sbjct: 515 KLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVL 569
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/390 (19%), Positives = 159/390 (40%), Gaps = 39/390 (10%)
Query: 243 MSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGN 302
M + G++PD +++ L Y ++++ + E+ L M + + S L YV++
Sbjct: 393 MKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEM 452
Query: 303 LASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKA 362
L S R N E + A + Y +G + + Q++ +
Sbjct: 453 LEKSWSWFKRF-----HVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIE 507
Query: 363 DNSI--GYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAEATI 420
N + YGI +C +KA + + M + G + Y +++ + +
Sbjct: 508 YNVMIKAYGISKSC------EKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRC 561
Query: 421 LVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSYLTIMTGL 479
+ ++ +G D Y A+I + + A ++++M E + PD+ Y ++
Sbjct: 562 YLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVV-VYGVLINAF 620
Query: 480 MENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRM----NFLQ 535
+ + +++ E + + I + +NS+I + K G L++A +R++ N Q
Sbjct: 621 ADTGNVQQAMSYV-EAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQ 679
Query: 536 FEPNDQTYLSLINGYVSAEKHFNVLMLWNDVKRKLSSDGHKGIKFDHNLVDAFLYAMV-- 593
+ P+ T +IN Y +++ +K++ ++ F +AM+
Sbjct: 680 Y-PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEAN-------------EFTFAMMLC 725
Query: 594 ---KGGFFDAAMQVVEKSHEMKIFVDKWRY 620
K G F+ A Q+ ++ EMKI D Y
Sbjct: 726 MYKKNGRFEEATQIAKQMREMKILTDPLSY 755
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 129/303 (42%), Gaps = 23/303 (7%)
Query: 178 NVLVEIIRKSGNLAAFLPVFEESCRVALDEKLEFMKPDVAACNAALEGCCCELESVTDAE 237
N ++ + K+G L + + +F++ R L KPDV N L GC A
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGL-------KPDVVTYNTLLAGCIKVKNGYPKAI 222
Query: 238 RVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGY 297
++G + + G++ D + +G + + A G E+ M G S YS+L++ Y
Sbjct: 223 ELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSY 282
Query: 298 VKSGNLASMES--TILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKL 355
G+ + T ++S+ K ++K Y++ G L++E L
Sbjct: 283 SWKGDYKKADELMTEMKSIGLVPNK------VMMTTLLKVYIKGGLFDRSRELLSE---L 333
Query: 356 EPSNIKADNSIGYG-IVNACVSMGLSDKAHSILDEMNALG-GSVGLGVYIPILKAYCKEN 413
E + A+N + Y +++ G ++A SI D+M G S G I ++ A C+
Sbjct: 334 ESAGY-AENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSI-MISALCRSK 391
Query: 414 RTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARV-PDLKGSY 472
R EA L + ++ + D+ + ++ + + +S + + M E V PD +
Sbjct: 392 RFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFH 451
Query: 473 LTI 475
+ I
Sbjct: 452 ILI 454
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 116/292 (39%), Gaps = 31/292 (10%)
Query: 247 GVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSNKKVFYSNLISGYVKSGNLASM 306
G +PD TFG L V E ++EL L + G +L++ YVK G+LA+
Sbjct: 209 GKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANA 268
Query: 307 ----ESTILRSLSDEDRKDWNFGGETFCA-----VVKEYLRKGNIKGLANLINEAQKLEP 357
E T R L F + C + K+ +R +K + + + L+
Sbjct: 269 WKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIR---MKTKMDEVVVSSMLKI 325
Query: 358 SNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYCKENRTAE 417
A +IG I G + K+ I ++ ALG S ++ Y K +
Sbjct: 326 CTTIASVTIGRQI------HGFALKSSQIRFDV-ALGNS--------LIDMYAKSGEIED 370
Query: 418 ATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKGSYLTIMT 477
A + E+ + DV ++ +LI +F+ A L+ M R+ ++L++++
Sbjct: 371 AVLAFEEMK----EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLS 426
Query: 478 GLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFR 529
+ EL D ++ IE + II ++G LE+A R
Sbjct: 427 ACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIR 478
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 116/265 (43%), Gaps = 14/265 (5%)
Query: 290 YSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLI 349
Y+ +++GYVKSG++ R + + D TF ++ Y R +L
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVC----TFNILINGYCRSSKFDLALDLF 251
Query: 350 NEAQK--LEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILK 407
E ++ EP N+ + N++ G + S G ++ + EM LG ++
Sbjct: 252 REMKEKGCEP-NVVSFNTLIRGFL----SSGKIEEGVKMAYEMIELGCRFSEATCEILVD 306
Query: 408 AYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDM-REARVP 466
C+E R +A LV+++ + + Y +L+E A + ++ ++ + P
Sbjct: 307 GLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTP 366
Query: 467 DLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHDWNSIIHAFCKAGRLEDARR 526
T++ GL ++ R E + F+++++ + I + +N ++ C + DA R
Sbjct: 367 CFIAC-TTLVEGLRKSGRTEKASGFMEKMM-NAGILPDSVTFNLLLRDLCSSDHSTDANR 424
Query: 527 TFRRMNFLQFEPNDQTYLSLINGYV 551
+ +EP++ TY L++G+
Sbjct: 425 LRLLASSKGYEPDETTYHVLVSGFT 449
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 161/391 (41%), Gaps = 35/391 (8%)
Query: 213 KPDVAACNAALEGCC--CELESVTDAERVVGTMSNLGVRPDELTFG--FLGYLYAVKGLQ 268
+PDV + N+ ++G C ++ S + + +PD ++F F G+
Sbjct: 88 EPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGF-----SKM 142
Query: 269 EKINELEVLMGEF--GCSNKKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGG 326
+ ++E+ V MG CS V YS I + KSG L L+S R +
Sbjct: 143 KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL----QLALKSFHSMKRDALSPNV 198
Query: 327 ETFCAVVKEYLRKGNIKGLANLINEAQKLEPSNIKADNSIGY-GIVNACVSMGLSDKAHS 385
TF ++ Y + G+++ +L E +++ S N + Y +++ G +A
Sbjct: 199 VTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSL----NVVTYTALIDGFCKKGEMQRAEE 254
Query: 386 ILDEMNALGGSVGLGVYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSM 445
+ M VY I+ + + + A + ++ + G++LD+ Y +I
Sbjct: 255 MYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLC 314
Query: 446 SSQDFQSAFSLFRDMREAR-VPDLKGSYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVG 504
+ + A + DM ++ VPD+ + T+M ++ R + +++ + E
Sbjct: 315 GNGKLKEATEIVEDMEKSDLVPDMV-IFTTMMNAYFKSGRMKAAVNMYHKLI-ERGFEPD 372
Query: 505 THDWNSIIHAFCKAGRLEDARRTFRRMNFLQFEPNDQTYLSLING------YVSAEKHFN 558
+++I K G+L +A + F + ND Y LI+ ++ E+ F+
Sbjct: 373 VVALSTMIDGIAKNGQLHEA-----IVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFS 427
Query: 559 VLMLWNDVKRK-LSSDGHKGIKFDHNLVDAF 588
+ V K + + G+ NLVDAF
Sbjct: 428 KISEAGLVPDKFMYTSWIAGLCKQGNLVDAF 458
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 153/381 (40%), Gaps = 69/381 (18%)
Query: 210 EFMKPDVAACNAALEGCCCELESVTDAERVVG---TMSNLGVRPDELTFGFL-------- 258
E KPDV+ CN L G ++ E+ V M GV PD TF F+
Sbjct: 71 EIPKPDVSICNHVLRGSAQSMK----PEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLE 126
Query: 259 ----GYLYAVK------GLQEKINELEVLM----GEFGCSNK---------KVFYSNLIS 295
G+ + K L E + +L G+ G +++ KV +S++ S
Sbjct: 127 WRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTS 186
Query: 296 GYVKSGNLASMESTILRSLSDEDRKDWNFGGETFCAVVKEYLRKGNIKGLANLINEAQKL 355
GY K G + + + +D+ WN T C KE ++ A++L
Sbjct: 187 GYAKRGKIDE-AMRLFDEMPYKDQVAWNV-MITGCLKCKE-------------MDSAREL 231
Query: 356 EPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLGVYIPILKAYC----- 410
+ D +++ V+ G +A I EM G + + +L A
Sbjct: 232 FDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDL 291
Query: 411 KENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSAFSLFRDMREARVPDLKG 470
+ + IL SS + + ++ALI+ A +FR +++ DL
Sbjct: 292 ETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR---DL-S 347
Query: 471 SYLTIMTGLMENHRPELMAAFLDEVVGDPRIEVGTHD--WNSIIHAFCKAGRLEDARRTF 528
++ T++ GL +H + F +E+ R++V ++ + +I A +GR+++ R+ F
Sbjct: 348 TWNTLIVGLALHHAEGSIEMF-EEM---QRLKVWPNEVTFIGVILACSHSGRVDEGRKYF 403
Query: 529 RRM-NFLQFEPNDQTYLSLIN 548
M + EPN + Y +++
Sbjct: 404 SLMRDMYNIEPNIKHYGCMVD 424
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 18/233 (7%)
Query: 226 CCCELESVTDAERVVGTMSNLGVRPDELTFGFLGYLYAVKGLQEKINELEVLMGEFGCSN 285
CC + + M G P+ +TF L +Y L +K+NEL +L G +
Sbjct: 673 CCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVD 732
Query: 286 KKVFYSNLISGYVKSGNLASMESTILRSLSDEDRKDWNFGG-----ETFCAVVKEYLRKG 340
+ Y+ +I+ Y K+ + +M S I K+ F G E + ++ Y G
Sbjct: 733 V-ISYNTIIAAYGKNKDYTNMSSAI---------KNMQFDGFSVSLEAYNTLLDAY---G 779
Query: 341 NIKGLANLINEAQKLEPSNIKADNSIGYGIVNACVSMGLSDKAHSILDEMNALGGSVGLG 400
K + + ++++ S D+ ++N G D+ +L E+ G L
Sbjct: 780 KDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLC 839
Query: 401 VYIPILKAYCKENRTAEATILVMEISSSGLQLDVETYDALIETSMSSQDFQSA 453
Y ++KAY EA LV E+ + D TY L+ + +F A
Sbjct: 840 SYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEA 892