Miyakogusa Predicted Gene

Lj2g3v1242380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1242380.1 Non Chatacterized Hit- tr|F6I1P6|F6I1P6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,85.71,2e-19,DUF2828,Domain of unknown function DUF2828; FAMILY NOT
NAMED,NULL,CUFF.36557.1
         (49 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G43400.1 | Symbols:  | Uncharacterised conserved protein UCP0...    95   7e-21
AT5G43390.1 | Symbols:  | Uncharacterised conserved protein UCP0...    94   2e-20
AT3G24780.1 | Symbols:  | Uncharacterised conserved protein UCP0...    81   1e-16
AT5G13210.1 | Symbols:  | Uncharacterised conserved protein UCP0...    80   3e-16

>AT5G43400.1 | Symbols:  | Uncharacterised conserved protein
           UCP015417,  vWA | chr5:17426182-17428149 REVERSE
           LENGTH=655
          Length = 655

 Score = 95.1 bits (235), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/49 (79%), Positives = 43/49 (87%)

Query: 1   MGFTENNSPTFLSSGNPCLDFFFHVVPDTPPQTLIQRLQLAWSHNPLTT 49
           MG TEN SPTFLSSGNPCLDFFFH+VPDT P  LIQRL ++WSH+PLTT
Sbjct: 52  MGLTENFSPTFLSSGNPCLDFFFHIVPDTSPDDLIQRLAISWSHDPLTT 100


>AT5G43390.1 | Symbols:  | Uncharacterised conserved protein
          UCP015417,  vWA | chr5:17422940-17424871 REVERSE
          LENGTH=643
          Length = 643

 Score = 94.0 bits (232), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/49 (77%), Positives = 43/49 (87%)

Query: 1  MGFTENNSPTFLSSGNPCLDFFFHVVPDTPPQTLIQRLQLAWSHNPLTT 49
          MG TEN SPTFL+SGNPCLDFFFH+VPDTP   LIQRL ++WSH+PLTT
Sbjct: 42 MGLTENFSPTFLTSGNPCLDFFFHIVPDTPSDDLIQRLAISWSHDPLTT 90


>AT3G24780.1 | Symbols:  | Uncharacterised conserved protein
           UCP015417,  vWA | chr3:9049446-9051593 FORWARD
           LENGTH=715
          Length = 715

 Score = 81.3 bits (199), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/49 (69%), Positives = 41/49 (83%)

Query: 1   MGFTENNSPTFLSSGNPCLDFFFHVVPDTPPQTLIQRLQLAWSHNPLTT 49
           MG+TEN S T+LSSGNPCLDFFFH+VP TP ++L QRL+ AW H+ LTT
Sbjct: 110 MGYTENRSATYLSSGNPCLDFFFHIVPSTPKKSLEQRLEEAWDHDSLTT 158


>AT5G13210.1 | Symbols:  | Uncharacterised conserved protein
           UCP015417,  vWA | chr5:4214567-4216588 FORWARD
           LENGTH=673
          Length = 673

 Score = 79.7 bits (195), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/49 (71%), Positives = 39/49 (79%)

Query: 1   MGFTENNSPTFLSSGNPCLDFFFHVVPDTPPQTLIQRLQLAWSHNPLTT 49
           MG+TEN S T+LSSGNPCLDFFFHVVP TP  +L Q LQ AW H+ LTT
Sbjct: 54  MGYTENKSATYLSSGNPCLDFFFHVVPSTPKHSLEQWLQGAWDHDALTT 102