Miyakogusa Predicted Gene

Lj2g3v1239840.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1239840.1 Non Chatacterized Hit- tr|B9RDA1|B9RDA1_RICCO
Transketolase, putative OS=Ricinus communis
GN=RCOM_16,92.07,0,Transketolase, pyrimidine binding
domain,Transketolase-like, pyrimidine-binding domain; Thiamin
diph,NODE_33443_length_908_cov_1061.459229.path1.1
         (227 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45290.1 | Symbols:  | Transketolase | chr2:18672737-18675589...   423   e-119
AT3G60750.2 | Symbols:  | Transketolase | chr3:22454004-22456824...   422   e-119
AT3G60750.1 | Symbols:  | Transketolase | chr3:22454004-22456824...   422   e-119

>AT2G45290.1 | Symbols:  | Transketolase | chr2:18672737-18675589
           FORWARD LENGTH=741
          Length = 741

 Score =  423 bits (1088), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 199/227 (87%), Positives = 213/227 (93%)

Query: 1   MTLLKMFGNFQKDTPAERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRGA 60
           MT+LK FGNFQK TP ERN+RFGVREHGMGAICNGIALHSPG IPYCATFFVFTDYMR A
Sbjct: 463 MTMLKAFGNFQKATPEERNLRFGVREHGMGAICNGIALHSPGFIPYCATFFVFTDYMRAA 522

Query: 61  IRLSALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYK 120
           +R+SALSEAGVIYVMTHDSIGLGEDGPTHQPIEHL+SFRAMPNI+M RPADGNETAGAYK
Sbjct: 523 MRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLSSFRAMPNIMMFRPADGNETAGAYK 582

Query: 121 VAVVNRKRPSILALSRQKLPNLPGTSIEGVEKGGYTISDNSTGNKPDVILIGTGSELEIA 180
           +AV  RK PS+LALSRQKLP LPGTSIE VEKGGYTISDNSTGNKPDVILIGTGSELEIA
Sbjct: 583 IAVTKRKTPSVLALSRQKLPQLPGTSIESVEKGGYTISDNSTGNKPDVILIGTGSELEIA 642

Query: 181 AKAADDLRKEGKAVRVVSFVSWELFDEQSEAYKESVLPSAVSARVSI 227
           A+AA+ LR++GK+VRVVSFV WELFDEQS+AYKESVLPS VSARVSI
Sbjct: 643 AQAAEKLREQGKSVRVVSFVCWELFDEQSDAYKESVLPSDVSARVSI 689


>AT3G60750.2 | Symbols:  | Transketolase | chr3:22454004-22456824
           FORWARD LENGTH=740
          Length = 740

 Score =  422 bits (1085), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 201/227 (88%), Positives = 214/227 (94%)

Query: 1   MTLLKMFGNFQKDTPAERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRGA 60
           MTLLK FG+FQK TP ERN+RFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRGA
Sbjct: 462 MTLLKAFGDFQKATPEERNLRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRGA 521

Query: 61  IRLSALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYK 120
           +R+SALSEAGVIYVMTHDSIGLGEDGPTHQPIEH+ASFRAMPN LM RPADGNETAGAYK
Sbjct: 522 MRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHIASFRAMPNTLMFRPADGNETAGAYK 581

Query: 121 VAVVNRKRPSILALSRQKLPNLPGTSIEGVEKGGYTISDNSTGNKPDVILIGTGSELEIA 180
           +AV  RK PSILALSRQKLP+LPGTSIEGVEKGGYTISD+S+GNKPDVILIGTGSELEIA
Sbjct: 582 IAVTKRKTPSILALSRQKLPHLPGTSIEGVEKGGYTISDDSSGNKPDVILIGTGSELEIA 641

Query: 181 AKAADDLRKEGKAVRVVSFVSWELFDEQSEAYKESVLPSAVSARVSI 227
           A+AA+ LRK+GK VRVVSFV WELFDEQS+ YKESVLPS VSARVSI
Sbjct: 642 AQAAEVLRKDGKTVRVVSFVCWELFDEQSDEYKESVLPSDVSARVSI 688


>AT3G60750.1 | Symbols:  | Transketolase | chr3:22454004-22456824
           FORWARD LENGTH=741
          Length = 741

 Score =  422 bits (1085), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 201/227 (88%), Positives = 214/227 (94%)

Query: 1   MTLLKMFGNFQKDTPAERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRGA 60
           MTLLK FG+FQK TP ERN+RFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRGA
Sbjct: 463 MTLLKAFGDFQKATPEERNLRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRGA 522

Query: 61  IRLSALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYK 120
           +R+SALSEAGVIYVMTHDSIGLGEDGPTHQPIEH+ASFRAMPN LM RPADGNETAGAYK
Sbjct: 523 MRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHIASFRAMPNTLMFRPADGNETAGAYK 582

Query: 121 VAVVNRKRPSILALSRQKLPNLPGTSIEGVEKGGYTISDNSTGNKPDVILIGTGSELEIA 180
           +AV  RK PSILALSRQKLP+LPGTSIEGVEKGGYTISD+S+GNKPDVILIGTGSELEIA
Sbjct: 583 IAVTKRKTPSILALSRQKLPHLPGTSIEGVEKGGYTISDDSSGNKPDVILIGTGSELEIA 642

Query: 181 AKAADDLRKEGKAVRVVSFVSWELFDEQSEAYKESVLPSAVSARVSI 227
           A+AA+ LRK+GK VRVVSFV WELFDEQS+ YKESVLPS VSARVSI
Sbjct: 643 AQAAEVLRKDGKTVRVVSFVCWELFDEQSDEYKESVLPSDVSARVSI 689