Miyakogusa Predicted Gene

Lj2g3v1227800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1227800.1 Non Chatacterized Hit- tr|A5AXI3|A5AXI3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,30.43,0.0000001,seg,NULL,CUFF.36526.1
         (306 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G69160.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    67   1e-11

>AT1G69160.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT3G13980.1); Has 173 Blast hits to 172 proteins
           in 54 species: Archae - 0; Bacteria - 0; Metazoa - 25;
           Fungi - 33; Plants - 84; Viruses - 2; Other Eukaryotes -
           29 (source: NCBI BLink). | chr1:26000315-26001280
           FORWARD LENGTH=321
          Length = 321

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 69/138 (50%), Gaps = 28/138 (20%)

Query: 161 PPYVLQTPTKSCKEF-RTSSDHKHTVPLPTKLNGHAKQNTLQNELKKDSTFLDDKYKHSN 219
           PP  L TPTK+ K+F   +S  K      TK N             K+ ++LD+K K   
Sbjct: 208 PPPYLNTPTKNYKQFLNYTSATKQVGEEETKTN-------------KEYSWLDEKLK-VM 253

Query: 220 NGLSEKQKNWGNELLEKDRTWLEKYSLEEKDIRKFNEVDDGAESDSSSDLFELQNYDLGY 279
             LSE Q           R W +   +++    K    DDG ESDSSSDLFELQNY+L  
Sbjct: 254 ESLSENQ-----------RIWSDDEDIDDDRRIKREGEDDGMESDSSSDLFELQNYEL-- 300

Query: 280 CSSGLPVYETTNMDNIKR 297
              GLPVYETTN+ NI +
Sbjct: 301 SRGGLPVYETTNVANINK 318