Miyakogusa Predicted Gene

Lj2g3v1196750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1196750.1 CUFF.36478.1
         (159 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G04190.2 | Symbols:  | unknown protein; Has 35333 Blast hits ...   269   5e-73
AT4G04190.1 | Symbols:  | unknown protein; Has 35 Blast hits to ...   269   5e-73

>AT4G04190.2 | Symbols:  | unknown protein; Has 35333 Blast hits to
           34131 proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr4:2024873-2026330 FORWARD LENGTH=184
          Length = 184

 Score =  269 bits (688), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 127/159 (79%), Positives = 144/159 (90%)

Query: 1   MDVDSQPTMEETILVGDDLMTGPPSPVVPPEIASHVLHGVDMCDGILRNMFLCLQINDIE 60
           MDVDSQP MEETILVGDDLMTGPPSPV+PPEIASHVL GVD+CDGILRN+FLCLQINDIE
Sbjct: 1   MDVDSQPMMEETILVGDDLMTGPPSPVIPPEIASHVLEGVDLCDGILRNLFLCLQINDIE 60

Query: 61  PFCQDEIALYKQCAERRDKEIRKRLQDSELKLGSSMPLDQAKERAAQLEAEVTTLERRLI 120
           PFCQDE+ALY+QCAE+RDK +R RLQ+SE KLG SMP++ AKER  QLEAE T+ ER LI
Sbjct: 61  PFCQDELALYRQCAEKRDKILRVRLQESEHKLGLSMPIELAKERITQLEAEATSFERHLI 120

Query: 121 LASGLEGMEGFRQRWSLHGRLTDSKKRLQFLKQGIEGRN 159
           LASG EG+EGFR+RWSLHGR+TD+KKRL+ LKQG+E RN
Sbjct: 121 LASGAEGIEGFRRRWSLHGRMTDTKKRLESLKQGMENRN 159


>AT4G04190.1 | Symbols:  | unknown protein; Has 35 Blast hits to 35
           proteins in 13 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other
           Eukaryotes - 2 (source: NCBI BLink). |
           chr4:2024873-2026330 FORWARD LENGTH=184
          Length = 184

 Score =  269 bits (688), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 127/159 (79%), Positives = 144/159 (90%)

Query: 1   MDVDSQPTMEETILVGDDLMTGPPSPVVPPEIASHVLHGVDMCDGILRNMFLCLQINDIE 60
           MDVDSQP MEETILVGDDLMTGPPSPV+PPEIASHVL GVD+CDGILRN+FLCLQINDIE
Sbjct: 1   MDVDSQPMMEETILVGDDLMTGPPSPVIPPEIASHVLEGVDLCDGILRNLFLCLQINDIE 60

Query: 61  PFCQDEIALYKQCAERRDKEIRKRLQDSELKLGSSMPLDQAKERAAQLEAEVTTLERRLI 120
           PFCQDE+ALY+QCAE+RDK +R RLQ+SE KLG SMP++ AKER  QLEAE T+ ER LI
Sbjct: 61  PFCQDELALYRQCAEKRDKILRVRLQESEHKLGLSMPIELAKERITQLEAEATSFERHLI 120

Query: 121 LASGLEGMEGFRQRWSLHGRLTDSKKRLQFLKQGIEGRN 159
           LASG EG+EGFR+RWSLHGR+TD+KKRL+ LKQG+E RN
Sbjct: 121 LASGAEGIEGFRRRWSLHGRMTDTKKRLESLKQGMENRN 159