Miyakogusa Predicted Gene

Lj2g3v1196400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1196400.1 tr|Q9LI86|Q9LI86_ARATH At3g25590 OS=Arabidopsis
thaliana GN=At3g25590 PE=2 SV=1,31.81,9e-19,seg,NULL,gene.g41000.t1.1
         (317 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G25590.1 | Symbols:  | unknown protein; Has 149 Blast hits to...    77   1e-14

>AT3G25590.1 | Symbols:  | unknown protein; Has 149 Blast hits to
           140 proteins in 44 species: Archae - 0; Bacteria - 6;
           Metazoa - 40; Fungi - 6; Plants - 39; Viruses - 0; Other
           Eukaryotes - 58 (source: NCBI BLink). |
           chr3:9302271-9303542 FORWARD LENGTH=423
          Length = 423

 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 141/372 (37%), Gaps = 142/372 (38%)

Query: 17  VGRVSFLIENEKNVETPVQHLNAKATKLQDKTGEKTEEVVVLRRSNSNCVEI----KRNG 72
           V R+S LI+ E+            A + ++    KTEEVVV +RS+S+CVEI    K + 
Sbjct: 89  VVRISSLIDEER------------AKQRKETKQRKTEEVVVFKRSSSSCVEINKRTKNHR 136

Query: 73  FWRFGKLFRXXXXXXXXCGRSVGGFDERN--EMWMVDHHG-----GVSRSRSLCSFRGGG 125
           F R G+ FR               F++ N  + W++D++      GVSRSRSLCSFRG  
Sbjct: 137 FSRIGRFFRKINLKKER------DFEKNNNNDSWVLDYNNDVKKLGVSRSRSLCSFRGKD 190

Query: 126 NGIFGSEDGGDSVLXXXXXXXXXXXXXXVNGGMML------------------------- 160
               GSE+ G S                VNGG+ L                         
Sbjct: 191 LYCIGSEEDGSSY----SGAFSAARSSSVNGGLGLCETEYSRKSNFEGRKSNFSETTEHW 246

Query: 161 ----------------ESGRRSGYSEAEP--------------------RRSDFMMFE-- 182
                              R+S +SE+EP                    RRS+F   E  
Sbjct: 247 KSNFEGGRKSNFSETTTENRKSNFSESEPPRRSGFEARKSNFSETEYPTRRSNFSETEYN 306

Query: 183 ---------SENGGRKSG------LTDVDASFYNRRVFSLRESD-FKGMDESSFIDLKLD 226
                    +EN  R+S        +D  A  + RRV S++ES  F G +E  FIDLK D
Sbjct: 307 TRRGNNPATAENHPRRSSNYEAARKSDSAAMNFTRRVMSMKESSYFTGGEEPGFIDLKFD 366

Query: 227 YSSSEAKPEFSAAKFGNMADTLSAFGSVRGGNFMVHDGDGVLNSGGSCRITVNDRG-VKR 285
            S                               + H G      GGSCR    D G +++
Sbjct: 367 SSGGGGGDVNDGV--------------------LEHGG------GGSCR---KDGGELRK 397

Query: 286 GRKSMKGWRWIF 297
            RKS KGW+WIF
Sbjct: 398 SRKSFKGWKWIF 409