Miyakogusa Predicted Gene

Lj2g3v1196320.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1196320.2 Non Chatacterized Hit- tr|D7T9F0|D7T9F0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,74.57,0,no
description,Armadillo-like helical; ARM repeat,Armadillo-type fold;
seg,NULL; IMPORTIN 9 (IMP9) (,CUFF.36443.2
         (367 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26170.1 | Symbols:  | ARM repeat superfamily protein | chr1:...   475   e-134

>AT1G26170.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:9047539-9054438 REVERSE LENGTH=1022
          Length = 1022

 Score =  475 bits (1223), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 224/350 (64%), Positives = 272/350 (77%)

Query: 1   MKAITMHTPPPVKIGACRALSQLLPEAKDKIVQPQXXXXXXXXXXXXNQASDETLHMVLE 60
           ++AITM  PPPVK+GACRAL QLLP+    ++ PQ             QA+DETL +VLE
Sbjct: 511 VRAITMDVPPPVKVGACRALLQLLPDMNSSVILPQIMNLFSSLTDLLRQATDETLVLVLE 570

Query: 61  TLHAAVMTGHESSTLVESIISPVILNVWASHVLDPFISIDALEVLEAIKNIPGCIHALVS 120
           TL  A+  GHE+S  +ESIISPVILNVW +H+ DPF+SID ++VLEAIKN PGC+H L S
Sbjct: 571 TLQQAIKAGHEASASIESIISPVILNVWVAHISDPFMSIDVIDVLEAIKNSPGCLHPLTS 630

Query: 121 RVLPYIGPILNKPQEQADGLVAGSLDLVTILLKNAPGDVVKAIYDVSFNAVIRIILQSDE 180
           R+LP+IGPILNKP +Q +GL +GSLDL+T+LLK AP D+VK  YD  F AVIRI+L S++
Sbjct: 631 RILPFIGPILNKPHQQPEGLASGSLDLLTMLLKGAPSDIVKTAYDFCFAAVIRIVLHSED 690

Query: 181 HSEIQNATECLSAFISGGRQDILNWGSDSESTMRSLLDVASRLLDPNLESSGSLFVGSYI 240
           H E+QNATECL+AFIS GRQ++L W  D   TMRSLLD  SRLL+P+LE SGSLF G YI
Sbjct: 691 HGELQNATECLAAFISSGRQELLTWSGDPGFTMRSLLDATSRLLNPDLEGSGSLFAGKYI 750

Query: 241 LQLILHLPSHMAIHIRDLVAALVRRMQSAQIASLRSSLLVVFARLVHMSVPNVGQFIDLL 300
           LQLILHLPS MA H++DLVAALVRR+QSA+I +L+ SLL++FARLVHMS PNV QFI+LL
Sbjct: 751 LQLILHLPSEMAPHVQDLVAALVRRLQSAEILALKGSLLLIFARLVHMSYPNVDQFINLL 810

Query: 301 ISIPAEGHDNSFAYVMSEWTKQQGEIQGAYQIKVXXXXXXXXXXXRHNEL 350
           +SIPA+GH+NSF YVM+EWTKQQGEIQ AYQIKV           RH+E 
Sbjct: 811 VSIPADGHENSFTYVMTEWTKQQGEIQSAYQIKVTTSALALLLSTRHSEF 860