Miyakogusa Predicted Gene

Lj2g3v1196320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1196320.1 Non Chatacterized Hit- tr|I1JEQ2|I1JEQ2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.6,0,no
description,Armadillo-like helical; ARM repeat,Armadillo-type fold;
seg,NULL; IMPORTIN 9 (IMP9) (,CUFF.36443.1
         (372 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26170.1 | Symbols:  | ARM repeat superfamily protein | chr1:...   438   e-123

>AT1G26170.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:9047539-9054438 REVERSE LENGTH=1022
          Length = 1022

 Score =  438 bits (1126), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 208/368 (56%), Positives = 272/368 (73%)

Query: 4   IVVILGPLWNTFVSSLRVYEQASIQGTXXXXXXXXXXXXXXKSLDSFVMQLFELLLTIVG 63
           ++ I+ PLW+TF SSL+VY ++SI G               KSLD+FV+QLFE L TIV 
Sbjct: 275 LMAIMRPLWHTFESSLQVYLRSSIDGAEDSYDGRYDSDGEEKSLDTFVIQLFEFLSTIVS 334

Query: 64  NPRLGKVVMANVKDLVYYTIAFLQMTEQQIHTWTMDANQFIADEEDATYSCRISGVLLLE 123
           + RL K +  NV++LVY T+AFLQ+TEQQ+HTW+MD NQF+ADE++ +YSCRISG+LLLE
Sbjct: 335 SRRLSKTIAGNVRELVYQTVAFLQITEQQVHTWSMDVNQFVADEDEGSYSCRISGILLLE 394

Query: 124 EVVNSFHGEGLLAIIDAAKQWFTESQIRKVSGSASWWRIREATLFALSSLSEQRLEIEES 183
           EV+N+F  EG+ A++DAA + F ESQ    + S SWWR+REA LF L+SLS+Q +E E+ 
Sbjct: 395 EVINTFGSEGINAVVDAAGKRFQESQRENSASSLSWWRLREAVLFTLASLSDQLVEAEDL 454

Query: 184 GFDTSSLKTLVEQIITEDSLIDPFEYPFLFARIFTSAAKFSSLLSHGVLEHFLNAAMKAI 243
             D ++L   +EQ+I ED+ I   E PFL+ARIFT+ AKFSS+++ G+LEHFLNAA++AI
Sbjct: 455 RIDPANLAKFIEQLIMEDTGIGYHECPFLYARIFTAVAKFSSVINAGILEHFLNAAVRAI 514

Query: 244 TMHTPPPVKIGACRALSQLLPEAKDKIVQPQXXXXXXXXXXXXNQASDETLHMVLETLHA 303
           TM  PPPVK+GACRAL QLLP+    ++ PQ             QA+DETL +VLETL  
Sbjct: 515 TMDVPPPVKVGACRALLQLLPDMNSSVILPQIMNLFSSLTDLLRQATDETLVLVLETLQQ 574

Query: 304 AVMTGHESSTLVESIISPVILNVWASHVLDPFISIDALEVLEAIKNIPGCIHALVSRVLP 363
           A+  GHE+S  +ESIISPVILNVW +H+ DPF+SID ++VLEAIKN PGC+H L SR+LP
Sbjct: 575 AIKAGHEASASIESIISPVILNVWVAHISDPFMSIDVIDVLEAIKNSPGCLHPLTSRILP 634

Query: 364 YIGPILNK 371
           +IGPILNK
Sbjct: 635 FIGPILNK 642