Miyakogusa Predicted Gene

Lj2g3v1194200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1194200.1 Non Chatacterized Hit- tr|I3TAR6|I3TAR6_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,67.53,5e-17,seg,NULL,CUFF.36433.1
         (387 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G25590.1 | Symbols:  | unknown protein; Has 149 Blast hits to...   145   5e-35

>AT3G25590.1 | Symbols:  | unknown protein; Has 149 Blast hits to
           140 proteins in 44 species: Archae - 0; Bacteria - 6;
           Metazoa - 40; Fungi - 6; Plants - 39; Viruses - 0; Other
           Eukaryotes - 58 (source: NCBI BLink). |
           chr3:9302271-9303542 FORWARD LENGTH=423
          Length = 423

 Score =  145 bits (366), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 151/463 (32%), Positives = 195/463 (42%), Gaps = 150/463 (32%)

Query: 1   MKERNKGVVEAYNTNNDMDCYYST-SEFHCKKHPSSSSG-GICAYCLKERLVKLVCSDCG 58
           MKER K        N+D+  YYST SEF C+KHPS SSG GIC YCL +RLV LVCS+CG
Sbjct: 1   MKERGKRTA-MERRNDDVSLYYSTPSEFTCRKHPSVSSGVGICPYCLNDRLVNLVCSECG 59

Query: 59  EQRLXXXXXXDEMISSNRNSCSTVEVG---SVGRVSFLIENEKNVETPVQHLNAKATKLQ 115
           EQRL      D  IS  R   + V+     +V R+S LI+ E            +A + +
Sbjct: 60  EQRLSSCSCSD--ISPTRTVDAAVDAAVGENVVRISSLIDEE------------RAKQRK 105

Query: 116 DKTGEKTEEVVVLRRSNSNCVEI----KRNGFWRFGKLFRXXXXXXXXCGRSVGGFDE-- 169
           +    KTEEVVV +RS+S+CVEI    K + F R G+ FR               F++  
Sbjct: 106 ETKQRKTEEVVVFKRSSSSCVEINKRTKNHRFSRIGRFFRKINLKKER------DFEKNN 159

Query: 170 RNEMWMVDHHG-----GVSRSRSLCSFRGGGNGIFGSEDGGDSVLXXXXXXXXXXXXXXV 224
            N+ W++D++      GVSRSRSLCSFRG      GSE+ G S                V
Sbjct: 160 NNDSWVLDYNNDVKKLGVSRSRSLCSFRGKDLYCIGSEEDGSSY----SGAFSAARSSSV 215

Query: 225 NGGMML-----------------------------------------ESGRRSGYSEAEP 243
           NGG+ L                                            R+S +SE+EP
Sbjct: 216 NGGLGLCETEYSRKSNFEGRKSNFSETTEHWKSNFEGGRKSNFSETTTENRKSNFSESEP 275

Query: 244 --------------------RRSDFMMFE-----------SENGGRKSG------LTDVD 266
                               RRS+F   E           +EN  R+S        +D  
Sbjct: 276 PRRSGFEARKSNFSETEYPTRRSNFSETEYNTRRGNNPATAENHPRRSSNYEAARKSDSA 335

Query: 267 ASFYNRRVFSLRESD-FKGMDESSFIDLKLDYSSSEAKPEFSAAKFGNMADTLSAFGSVR 325
           A  + RRV S++ES  F G +E  FIDLK D S                           
Sbjct: 336 AMNFTRRVMSMKESSYFTGGEEPGFIDLKFDSSGGGGGDVNDGV---------------- 379

Query: 326 GGNFMVHDGDGVLNSGGSCRITVNDRG-VKRGRKSMKGWRWIF 367
               + H G      GGSCR    D G +++ RKS KGW+WIF
Sbjct: 380 ----LEHGG------GGSCR---KDGGELRKSRKSFKGWKWIF 409