Miyakogusa Predicted Gene

Lj2g3v1182640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1182640.1 Non Chatacterized Hit- tr|I3S3K2|I3S3K2_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,62.67,7e-16,seg,NULL; PSK,Phytosulfokine,CUFF.36383.1
         (83 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G49780.1 | Symbols: ATPSK4, ATPSK3 (FORMER SYMBOL), PSK4 | ph...    67   3e-12
AT5G65870.1 | Symbols: ATPSK5, PSK5 | phytosulfokine 5 precursor...    52   9e-08
AT2G22860.1 | Symbols: ATPSK2, PSK2 | phytosulfokine 2 precursor...    49   5e-07

>AT3G49780.1 | Symbols: ATPSK4, ATPSK3 (FORMER SYMBOL), PSK4 |
          phytosulfokine 4 precursor | chr3:18465750-18466254
          FORWARD LENGTH=79
          Length = 79

 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 3/62 (4%)

Query: 23 YATRLGPASSSVISKSNQHGVLEEEMNSIEE-ACQDIGEDECLMRRTLAAHTDYIYTQKQ 81
          YA RL P +++ +S+ N   V E E + +EE +C  IGE+ECL+RR+L  HTDYIYTQ  
Sbjct: 20 YAARLTPTTTTALSRENS--VKEIEGDKVEEESCNGIGEEECLIRRSLVLHTDYIYTQNH 77

Query: 82 KP 83
          KP
Sbjct: 78 KP 79


>AT5G65870.1 | Symbols: ATPSK5, PSK5 | phytosulfokine 5 precursor
          | chr5:26351593-26352055 FORWARD LENGTH=77
          Length = 77

 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 7/61 (11%)

Query: 24 ATRLGPASSSVISKSNQHGVLEEEMNSIEEACQDIGEDEC-LMRRTLAAHTDYIYTQKQK 82
          + RL P  +SV  + N    LE+     E  C+ +GE+EC L+RRTL AHTDYIYTQ   
Sbjct: 23 SARLNP--TSVYPEENSFKKLEQG----EVICEGVGEEECFLIRRTLVAHTDYIYTQNHN 76

Query: 83 P 83
          P
Sbjct: 77 P 77


>AT2G22860.1 | Symbols: ATPSK2, PSK2 | phytosulfokine 2 precursor
          | chr2:9737666-9738077 FORWARD LENGTH=87
          Length = 87

 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/37 (62%), Positives = 29/37 (78%), Gaps = 1/37 (2%)

Query: 46 EEMNSIEEACQDIGEDECLMRRTLAAHTDYIYTQKQK 82
          ++M+ ++E C    ED CLMRRTL AHTDYIYTQK+K
Sbjct: 50 DDMHMVDENCGADDED-CLMRRTLVAHTDYIYTQKKK 85