Miyakogusa Predicted Gene

Lj2g3v1172530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1172530.1 Non Chatacterized Hit- tr|B6U4U3|B6U4U3_MAIZE
Putative uncharacterized protein OS=Zea mays PE=4 SV=1,81.82,5e-17,no
description,NULL; ARSENICAL PUMP-DRIVING ATPASE
(ARSENITE-TRANSLOCATING ATPASE),NULL; ARSENICAL
P,NODE_88772_length_1684_cov_13.589667.path1.1
         (449 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26090.1 | Symbols:  | P-loop containing nucleoside triphosph...   466   e-131

>AT1G26090.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:9020509-9022619
           FORWARD LENGTH=455
          Length = 455

 Score =  466 bits (1200), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 235/405 (58%), Positives = 284/405 (70%), Gaps = 2/405 (0%)

Query: 45  ASSSEPPTKLLTFLGKGGSGKTTAAIFAAQHYALAGLNTCLVLHGQDTTAEYLLDCKIGT 104
           A SS+  TK +TFLGKGGSGKTTAA+FAAQHYALAGL+TCLV+H QD +AE+LL  KIGT
Sbjct: 51  ADSSQKLTKFVTFLGKGGSGKTTAAVFAAQHYALAGLSTCLVIHNQDPSAEFLLGSKIGT 110

Query: 105 SHVVCSKNLSAVRLETTKMLLEPLKLLKQADAQLNLTQXXXXXXXXXXXXXXXXMDSIFS 164
           S  + + NLS +RLETTKMLLEPLK LKQADA+LN+TQ                MDSIFS
Sbjct: 111 SPTLINDNLSVIRLETTKMLLEPLKQLKQADARLNMTQGVLEGVVGEELGVLPGMDSIFS 170

Query: 165 VLALEKQVGFLGTAASKRQQDK-FDLIVYDGISSEETLRFIGGSSKARLYLKYLRTLAEK 223
           +L LE+ VGF   A  K  + K FD+I+YDGIS+EETLR IG SSK RLY KYLR+LAEK
Sbjct: 171 MLELERLVGFFRQATRKNHKGKPFDVIIYDGISTEETLRMIGLSSKTRLYAKYLRSLAEK 230

Query: 224 TELGRLAAPSLLRLVDEAVKISSSRSYFNGRGSSETWDNLDQLLERGSSAFSNPQRFGCF 283
           T+LGRL +PS++R VDE++ I+S++S F+G  S   WD L++ LE G+SA+ +P+RF  F
Sbjct: 231 TDLGRLTSPSIMRFVDESMNINSNKSPFDGMTSPAMWDTLERFLETGASAWRDPERFRSF 290

Query: 284 LVMDPNNPTSVNSALRYWGCAIQAGAQVSGAFGVRQKNIESLDRVKKDFXXXXXXXXXXX 343
           LVMDPNNP SV +ALRYWGC +QAG+ VSGAF +   ++ S    K DF           
Sbjct: 291 LVMDPNNPMSVKAALRYWGCTVQAGSHVSGAFAISSSHLTS-QIPKADFVPLPFASASVP 349

Query: 344 XXXXXXDWSRVLVDTINEDARHXXXXXXXXXXXXXXXVKFDIKRKSVTLFMPGFDKSEIK 403
                 DW ++L+D  N   R                V FD  +K VTLFMPGF+KSEIK
Sbjct: 350 FTITGLDWDKILLDQANSSIRELLSETVSHGTSLTQTVMFDTAKKLVTLFMPGFEKSEIK 409

Query: 404 LYQYRGGSELLVEAGDQRRVIALPPGIQGKVGGAKFGDRSLVVTL 448
           LYQYRGGSELL+EAGDQRRVI LP  IQGKVGGAKF DRSL+VT+
Sbjct: 410 LYQYRGGSELLIEAGDQRRVIHLPSQIQGKVGGAKFVDRSLIVTM 454