Miyakogusa Predicted Gene

Lj2g3v1172490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1172490.1 Non Chatacterized Hit- tr|I3SEL7|I3SEL7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.39,0,coiled-coil,NULL; DUF572,CWC16 protein; SUBFAMILY NOT
NAMED,NULL; CELL CYCLE CONTROL PROTEIN CWF16-R,CUFF.36374.1
         (310 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G25682.1 | Symbols:  | Family of unknown function (DUF572)  |...   439   e-123
AT1G25988.1 | Symbols:  | Family of unknown function (DUF572)  |...   118   4e-27
AT1G17130.1 | Symbols:  | Family of unknown function (DUF572)  |...    86   3e-17
AT1G17130.2 | Symbols:  | Family of unknown function (DUF572)  |...    84   1e-16
AT3G43250.1 | Symbols:  | Family of unknown function (DUF572)  |...    67   2e-11
AT2G32050.1 | Symbols:  | Family of unknown function (DUF572)  |...    64   2e-10
AT2G29430.1 | Symbols:  | Family of unknown function (DUF572)  |...    50   2e-06

>AT1G25682.1 | Symbols:  | Family of unknown function (DUF572)  |
           chr1:9002532-9004550 REVERSE LENGTH=310
          Length = 310

 Score =  439 bits (1129), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/311 (67%), Positives = 243/311 (78%), Gaps = 3/311 (0%)

Query: 1   MSSLAAARADNFYYPPEWDPSQGSLNNFHGQHALRERARKLDQGILIIRFEMPFNIWCGG 60
           MS+L+AARADNFYYPPEW P QGSLN F GQH LRERA+K+ +GIL+IRFEMP+NIWCGG
Sbjct: 1   MSTLSAARADNFYYPPEWTPDQGSLNKFQGQHPLRERAKKIGEGILVIRFEMPYNIWCGG 60

Query: 61  CNSMIGKGVRFNAEKKQVGNYYSTKIWSFTMKSACCRHEIVIQTDPKNCEYVIISGAQKK 120
           C+SMI KGVRFNAEKKQVGNYYSTKIWSF MKS CC+HEIVIQTDP+NCEYVI SGAQKK
Sbjct: 61  CSSMIAKGVRFNAEKKQVGNYYSTKIWSFAMKSPCCKHEIVIQTDPQNCEYVITSGAQKK 120

Query: 121 TEDYDVEDAEVLELATNEERSLLADPFYRLEHGEEDLKKKKEAEPVLVRLQRLSDTRHSD 180
            E+Y+ EDAE +EL   +E+  LADPFYRLEH E DL+KKK AEP+LVRLQR+SD RH+D
Sbjct: 121 VEEYEAEDAETMELTAEQEKGKLADPFYRLEHQEVDLQKKKAAEPLLVRLQRVSDARHAD 180

Query: 181 DYALNKSLRAQLRSQKKRVAEEETASRKRGLGIRLLPATEQDAATAKQVKFLTKFDKNRK 240
           DY+LNK+LRAQLR  +KRVAEEETASRK GLGIRLLP +E+D   A  VKF +KFDKNRK
Sbjct: 181 DYSLNKALRAQLRRHRKRVAEEETASRKLGLGIRLLPKSEEDIKAASNVKFKSKFDKNRK 240

Query: 241 DKRALINXXXXXXXXXXXXDXXXXXXXXXXXXISATAASSLLTGGLKPSSWSQGTIPS-S 299
           DKRALI+                         ISA +ASSLL GG K SS S  T PS S
Sbjct: 241 DKRALIHASSIFPESSYSSSKKRMELEAKRRKISAASASSLLRGGFKASSLS--TNPSAS 298

Query: 300 RQKGASMTVRR 310
           + K +S++VR+
Sbjct: 299 KPKVSSVSVRK 309


>AT1G25988.1 | Symbols:  | Family of unknown function (DUF572)  |
           chr1:9016252-9017450 REVERSE LENGTH=180
          Length = 180

 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 54/78 (69%), Positives = 64/78 (82%)

Query: 103 QTDPKNCEYVIISGAQKKTEDYDVEDAEVLELATNEERSLLADPFYRLEHGEEDLKKKKE 162
           +TDP+NCEYVI SGAQKK E+Y+ EDAE +EL   +E+  LADPFYRLEH E DL+KKK 
Sbjct: 27  KTDPQNCEYVITSGAQKKVEEYEAEDAETMELTAEQEKGKLADPFYRLEHQEVDLQKKKA 86

Query: 163 AEPVLVRLQRLSDTRHSD 180
           AEP LVRLQR+SD RH+D
Sbjct: 87  AEPFLVRLQRVSDARHAD 104


>AT1G17130.1 | Symbols:  | Family of unknown function (DUF572)  |
           chr1:5854264-5856472 FORWARD LENGTH=331
          Length = 331

 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 19/207 (9%)

Query: 11  NFYYPPEWDPSQGSLNNFHGQHALRERARKLDQGILIIRFEMPFNIWCGGCNSMIGKGVR 70
           N YYPP++DP            A  +R R+     + +R  +P ++ CG C + I KG +
Sbjct: 8   NKYYPPDFDP------------AKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTK 55

Query: 71  FNAEKKQV--GNYYSTKIWSFTMKSACCRHEIVIQTDPKNCEYVIISGAQKKTEDYDVED 128
           FN+ K+ V    Y   +I+ F  K   C  E+ ++TDP+N +Y++ SGA +  E +  ED
Sbjct: 56  FNSRKEDVIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGASRNYEPWRAED 115

Query: 129 AEVLELATNEERSLLADPFYRLEHGEEDLKKKKEAEPVLVRLQRLSDTRHSDDYALNKSL 188
            EV +     +   + D    LE+   D K++ +    L  ++ +  +RH+   +++  L
Sbjct: 116 EEVDKDKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMK-SRHA-TVSVDAML 173

Query: 189 RAQLRS---QKKRVAEEETASRKRGLG 212
            A  R+   + KR+ EE+ A  K   G
Sbjct: 174 EALQRTGAEKVKRIEEEDEAVIKSIFG 200


>AT1G17130.2 | Symbols:  | Family of unknown function (DUF572)  |
           chr1:5854264-5856472 FORWARD LENGTH=338
          Length = 338

 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 26/214 (12%)

Query: 11  NFYYPPEWDPSQGSLNNFHGQHALRERARKLDQGILIIRFEMPFNIWCGGCNSMIGKGVR 70
           N YYPP++DP            A  +R R+     + +R  +P ++ CG C + I KG +
Sbjct: 8   NKYYPPDFDP------------AKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTK 55

Query: 71  FNAEKKQV---------GNYYSTKIWSFTMKSACCRHEIVIQTDPKNCEYVIISGAQKKT 121
           FN+ K+ V           Y   +I+ F  K   C  E+ ++TDP+N +Y++ SGA +  
Sbjct: 56  FNSRKEDVIGENFSFDVQTYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGASRNY 115

Query: 122 EDYDVEDAEVLELATNEERSLLADPFYRLEHGEEDLKKKKEAEPVLVRLQRLSDTRHSDD 181
           E +  ED EV +     +   + D    LE+   D K++ +    L  ++ +  +RH+  
Sbjct: 116 EPWRAEDEEVDKDKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMK-SRHA-T 173

Query: 182 YALNKSLRAQLRS---QKKRVAEEETASRKRGLG 212
            +++  L A  R+   + KR+ EE+ A  K   G
Sbjct: 174 VSVDAMLEALQRTGAEKVKRIEEEDEAVIKSIFG 207


>AT3G43250.1 | Symbols:  | Family of unknown function (DUF572)  |
           chr3:15216713-15217462 FORWARD LENGTH=249
          Length = 249

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 14/109 (12%)

Query: 11  NFYYPPEWDPSQGSLNNFHGQHALRERARKLDQGILIIRFEMPFNIWCGGCNSMIGKGVR 70
           N YYPP++DP +      H     + + +K       IRF +P  + C  C + + +G +
Sbjct: 8   NKYYPPDFDPKK-----IHRIKKPKNQQKK-------IRFMLPVRVRCNTCGNYMSEGTK 55

Query: 71  FNAEKKQV--GNYYSTKIWSFTMKSACCRHEIVIQTDPKNCEYVIISGA 117
           FN  ++ V    Y   KI  F +K   C  E+ I+TDPKN  Y + SGA
Sbjct: 56  FNCRQEDVITETYLGLKIHRFYIKCTKCLAELTIKTDPKNHSYTVESGA 104


>AT2G32050.1 | Symbols:  | Family of unknown function (DUF572)  |
           chr2:13637879-13638643 REVERSE LENGTH=254
          Length = 254

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 50/109 (45%), Gaps = 14/109 (12%)

Query: 11  NFYYPPEWDPSQGSLNNFHGQHALRERARKLDQGILIIRFEMPFNIWCGGCNSMIGKGVR 70
           N YYPP +DP Q              R RK       IR  +P  I C  C + + +G +
Sbjct: 8   NKYYPPNFDPKQIP------------RIRKPKNQQRKIRSMVPLRIRCNTCGNYMSEGTK 55

Query: 71  FNAEKKQV--GNYYSTKIWSFTMKSACCRHEIVIQTDPKNCEYVIISGA 117
            N  ++ V    Y   KI  F  K + C  E++++TDPKN  YV  SGA
Sbjct: 56  INCREENVIGETYLGIKIHRFYFKCSKCCTELILKTDPKNSSYVAESGA 104


>AT2G29430.1 | Symbols:  | Family of unknown function (DUF572)  |
           chr2:12619700-12619954 FORWARD LENGTH=84
          Length = 84

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 50  FEMPFNIWCGGCNSMIGKGVRFNAEKKQV--GNYYSTKIWSFTMKSACCRHEIVIQTDPK 107
             +P  + C  C++++ KG +F +  + V    Y   KI+ F ++     HE+  +TDPK
Sbjct: 8   LSLPMRLQCNNCDNIMSKGTKFTSRVEDVIGETYLGIKIFRFQIQCTNGSHEMKFRTDPK 67

Query: 108 NCEYVIISGAQK 119
           N +++I SGA +
Sbjct: 68  NADFIIESGATR 79