Miyakogusa Predicted Gene

Lj2g3v1168820.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1168820.2 Non Chatacterized Hit- tr|A5GMC4|A5GMC4_SYNPW
Putative uncharacterized protein SynWH7803_1663 OS=Syn,33.05,8e-18,no
description,NULL; Metallo-hydrolase/oxidoreductase,NULL;
Lactamase_B_3,NULL; seg,NULL,CUFF.36344.2
         (320 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G29700.1 | Symbols:  | Metallo-hydrolase/oxidoreductase super...   431   e-121

>AT1G29700.1 | Symbols:  | Metallo-hydrolase/oxidoreductase
           superfamily protein | chr1:10385196-10386906 REVERSE
           LENGTH=350
          Length = 350

 Score =  431 bits (1108), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 209/322 (64%), Positives = 251/322 (77%), Gaps = 7/322 (2%)

Query: 1   MATLHCNSLPLNKTCYPR--RTTSYPVFSSTHFXXXXXXXXXXXXRALRTSTFRWGCTVS 58
           M  LH NSLPL+     R    +++P+FSST                 R+ T      VS
Sbjct: 12  MMPLHANSLPLSINTKSRVLSASAFPLFSSTPHLPSRSLSIRLSPNVSRSLT-----VVS 66

Query: 59  AVMSKENSVGSSFSATDVFKLTYLEGNSWLWNVGGANILVDPILVGNLDFGIPWLYDAAK 118
           +V+S++ +   S S TD FKLTYLEGNSWLW   G  ILVDPILVGNLDFGIPWLYDAAK
Sbjct: 67  SVLSEDRATNVSGSGTDAFKLTYLEGNSWLWETAGLKILVDPILVGNLDFGIPWLYDAAK 126

Query: 119 KFLKKFQLSDLPEIDCILITQSLDDHCHLKTLKPFSQKFPNVRVIATPNAKSLLDPLFRN 178
           ++LK F+L DLPE+DC+LITQSLDDHCHL TL+P S+K P ++VIATPNAK LLDPLF N
Sbjct: 127 RYLKAFKLDDLPEVDCLLITQSLDDHCHLNTLRPLSEKSPGIKVIATPNAKPLLDPLFSN 186

Query: 179 VTYIEPGESSDIETNSGAKVRVKATAGPVLGPPWQRPENGYLVTSPLGQLSLYYEPHCVY 238
           VTY+EPG+S ++   +G+KVRVKATAGPVLGPPWQRPENGYL+ SP  Q+SLYYEPHCV 
Sbjct: 187 VTYLEPGDSFELNARNGSKVRVKATAGPVLGPPWQRPENGYLLVSPEDQISLYYEPHCVC 246

Query: 239 NQNFIEKEKADIVITPVIKQLLPYFTLVSGQEDAVKLAKLLQAKFIVPMRNGDLDSKGLL 298
           N   ++ E+ADIVITPVIKQLLP FTLVSGQEDAV+LAKLL+AKF+VPM+NG+L++KGLL
Sbjct: 247 NMELLKNERADIVITPVIKQLLPRFTLVSGQEDAVQLAKLLKAKFVVPMQNGELEAKGLL 306

Query: 299 ASIVRSEGTLESFKELLSKEIP 320
           AS+V+ EGT+ESFKELL KE+P
Sbjct: 307 ASLVKKEGTIESFKELLLKELP 328