Miyakogusa Predicted Gene

Lj2g3v1155320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1155320.1 tr|B9HJ23|B9HJ23_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_564524 PE=4
SV=1,83.17,0,(Trans)glycosidases,Glycoside hydrolase, superfamily;
GLYCOSYL_HYDROL_F31_1,Glycoside hydrolase,
fam,NODE_67577_length_898_cov_12.286192.path1.1
         (310 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G68560.1 | Symbols: ATXYL1, XYL1, TRG1 | alpha-xylosidase 1 |...   499   e-142
AT3G45940.1 | Symbols:  | Glycosyl hydrolases family 31  protein...   409   e-114
AT5G11720.1 | Symbols:  | Glycosyl hydrolases family 31  protein...   336   1e-92
AT3G23640.2 | Symbols: HGL1 | heteroglycan glucosidase 1 | chr3:...   129   3e-30
AT3G23640.1 | Symbols: HGL1 | heteroglycan glucosidase 1 | chr3:...   129   3e-30
AT5G63840.1 | Symbols: RSW3, PSL5 | Glycosyl hydrolases family 3...   107   1e-23

>AT1G68560.1 | Symbols: ATXYL1, XYL1, TRG1 | alpha-xylosidase 1 |
           chr1:25734435-25737897 REVERSE LENGTH=915
          Length = 915

 Score =  499 bits (1286), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 232/315 (73%), Positives = 264/315 (83%), Gaps = 5/315 (1%)

Query: 1   MDVLYTGTSLTYKIIGGVFDFYLFSGPSPLNVVDQYTSLIGRPAPMPYWAFGFHQSRL-Y 59
           MDV Y G SLTYK+IGGVFDFY  +GPSPLNVVDQYT LIGRPAPMPYW+ GFHQ R  Y
Sbjct: 243 MDVFYRGDSLTYKVIGGVFDFYFIAGPSPLNVVDQYTQLIGRPAPMPYWSLGFHQCRWGY 302

Query: 60  HNLSVVEDVVENYKKALIPLDVIWK----VSGYRDLTLNPTNYPRPKLLNFLNKIHSIGM 115
           HNLSVVEDVV+NYKKA IPLDVIW     + G++D TLNP  YPR KLL FL+KIH IGM
Sbjct: 303 HNLSVVEDVVDNYKKAKIPLDVIWNDDDHMDGHKDFTLNPVAYPRAKLLAFLDKIHKIGM 362

Query: 116 KLVVIIDPGIAVNSSFGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWG 175
           K +VI DPGI VN+S+G +QR +A DVFIKYEG+P+LAQVWPG V FPDFLNPKTVSWWG
Sbjct: 363 KYIVINDPGIGVNASYGTFQRAMAADVFIKYEGKPFLAQVWPGPVYFPDFLNPKTVSWWG 422

Query: 176 DEIRRFHELVPGDGLWLDMNEASNFCSGKCKIPNGKVCSGTETSSVYCCLECENLNKTRW 235
           DEI+RFH+LVP DGLW+DMNE SNFCSG C IP GK C   E     CCL+C+N+ KTRW
Sbjct: 423 DEIKRFHDLVPIDGLWIDMNEVSNFCSGLCTIPEGKQCPSGEGPGWVCCLDCKNITKTRW 482

Query: 236 DDPPYKINASGIQAPIGYKTIATSAVHYNGILEYDAHSIYGFSQSIATHKALLGLEGKRP 295
           DDPPYKINA+G+ AP+G+KTIATSA HYNG+ EYDAHSIYGFS++IATHK LL ++GKRP
Sbjct: 483 DDPPYKINATGVVAPVGFKTIATSATHYNGVREYDAHSIYGFSETIATHKGLLNVQGKRP 542

Query: 296 FILSRSTYVGSGKYA 310
           FILSRST+VGSG+YA
Sbjct: 543 FILSRSTFVGSGQYA 557


>AT3G45940.1 | Symbols:  | Glycosyl hydrolases family 31  protein |
           chr3:16886226-16889171 REVERSE LENGTH=868
          Length = 868

 Score =  409 bits (1050), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/315 (64%), Positives = 236/315 (74%), Gaps = 50/315 (15%)

Query: 1   MDVLYTGTSLTYKIIGGVFDFYLFSGPSPLNVVDQYTSLIGRPAPMPYWAFGFHQSRL-Y 59
           MDV Y G SLTYK+IGGVFDFY F+GPSPLNVVDQYTSLIGRPAPMPYW+ GFHQ R  Y
Sbjct: 240 MDVFYRGDSLTYKVIGGVFDFYFFAGPSPLNVVDQYTSLIGRPAPMPYWSLGFHQCRWGY 299

Query: 60  HNLSVVEDVVENYKKALIPLDVIWK----VSGYRDLTLNPTNYPRPKLLNFLNKIHSIGM 115
            N+SVV+DVV+NY+KA IPLDVIW     + GY+D TL+  N+P  KLL+FL++IH +GM
Sbjct: 300 RNVSVVKDVVDNYQKAKIPLDVIWNDADYMDGYKDFTLDLVNFPHAKLLSFLDRIHKMGM 359

Query: 116 KLVVIIDPGIAVNSSFGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWG 175
           K VVI DPGI VN+S+GVYQRG+A+DVFIKYEG+P+LAQVWPG V FPDFLNPKTVSWWG
Sbjct: 360 KYVVIKDPGIGVNASYGVYQRGMASDVFIKYEGKPFLAQVWPGPVYFPDFLNPKTVSWWG 419

Query: 176 DEIRRFHELVPGDGLWLDMNEASNFCSGKCKIPNGKVCSGTETSSVYCCLECENLNKTRW 235
           DEIRRFHELVP DGLW+DMNE                                       
Sbjct: 420 DEIRRFHELVPIDGLWIDMNE--------------------------------------- 440

Query: 236 DDPPYKINASGIQAPIGYKTIATSAVHYNGILEYDAHSIYGFSQSIATHKALLGLEGKRP 295
                 INA+G +A +G+KTI TSA HYNG+ EYDAHSIYGFS++IATHKALL ++GKRP
Sbjct: 441 ------INATGHKASLGFKTIPTSAYHYNGVREYDAHSIYGFSEAIATHKALLAVQGKRP 494

Query: 296 FILSRSTYVGSGKYA 310
           FILSRST+VGSG+YA
Sbjct: 495 FILSRSTFVGSGQYA 509


>AT5G11720.1 | Symbols:  | Glycosyl hydrolases family 31  protein |
           chr5:3776840-3780025 FORWARD LENGTH=902
          Length = 902

 Score =  336 bits (861), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 163/315 (51%), Positives = 215/315 (68%), Gaps = 29/315 (9%)

Query: 1   MDVLYTGTSLTYKIIGGVFDFYLFSGPSPLNVVDQYTSLIGRPAPMPYWAFGFHQSRL-Y 59
           MDV Y G  +TY +IGGV D Y+F+GPSP  V++QYT LIGRPAPMPYW+FGFHQ R  Y
Sbjct: 262 MDVKYEGHRITYNVIGGVIDLYVFAGPSPEMVMNQYTELIGRPAPMPYWSFGFHQCRYGY 321

Query: 60  HNLSVVEDVVENYKKALIPLDVIWK----VSGYRDLTLNPTNYPRPKLLNFLNKIHSIGM 115
            N+S +E VV+ Y KA IPL+V+W     + GY+D TL+P N+P  K+ +F++ +H  G 
Sbjct: 322 KNVSDLEYVVDGYAKAGIPLEVMWTDIDYMDGYKDFTLDPVNFPEDKMQSFVDTLHKNGQ 381

Query: 116 KLVVIIDPGIAVNSSFGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWG 175
           K V+I+DPGI V+SS+G Y RG+  DVFIK  GEPYL +VWPG V FPDFLNP   ++W 
Sbjct: 382 KYVLILDPGIGVDSSYGTYNRGMEADVFIKRNGEPYLGEVWPGKVYFPDFLNPAAATFWS 441

Query: 176 DEIRRFHELVPGDGLWLDMNEASNFCSGKCKIPNGKVCSGTETSSVYCCLECENLNKTRW 235
           +EI+ F E++P DGLW+DMNE SNF +         + SG+                   
Sbjct: 442 NEIKMFQEILPLDGLWIDMNELSNFIT-------SPLSSGSSL----------------- 477

Query: 236 DDPPYKINASGIQAPIGYKTIATSAVHYNGILEYDAHSIYGFSQSIATHKALLGLEGKRP 295
           DDPPYKIN SG + PI  KT+  +++H+  I EYDAH++YG  ++ ATH+A++ + GKRP
Sbjct: 478 DDPPYKINNSGDKRPINNKTVPATSIHFGNISEYDAHNLYGLLEAKATHQAVVDITGKRP 537

Query: 296 FILSRSTYVGSGKYA 310
           FILSRST+V SGKY 
Sbjct: 538 FILSRSTFVSSGKYT 552


>AT3G23640.2 | Symbols: HGL1 | heteroglycan glucosidase 1 |
           chr3:8502355-8509358 FORWARD LENGTH=991
          Length = 991

 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 138/291 (47%), Gaps = 55/291 (18%)

Query: 28  SPLNVVDQYTSLIGRPAPMPYWAFGFHQSRL-YHNLSVVEDVVENYKKALIPLDVIWK-- 84
           SP  V++  +  IG     P WA G+HQ R  Y +   V ++ + ++   IP DVIW   
Sbjct: 177 SPTAVLESLSHAIGTVFMPPKWALGYHQCRWSYMSDKRVAEIAQTFRDKKIPSDVIWMDI 236

Query: 85  --VSGYRDLTLNPTNYPRPKLLNFLNKIHSIGMKLVVIIDPGIAVNSSFGVYQRGIANDV 142
             + G+R  T +   +P P  L     +HS G K + ++DPGI     + VY  G  NDV
Sbjct: 237 DYMDGFRCFTFDKERFPDPSAL--AKDLHSNGFKAIWMLDPGIKQEEGYYVYDSGSKNDV 294

Query: 143 FI-KYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPG-DGLWLDMNEASNF 200
           +I + +G+P+  +VWPG   FPD+ N K  SWW + ++ F  +  G DG+W DMNE + F
Sbjct: 295 WISRADGKPFTGEVWPGPCVFPDYTNSKARSWWANLVKEF--VSNGVDGIWNDMNEPAVF 352

Query: 201 CSGKCKIPNGKVCSGTETSSVYCCLECENLNKTRWDDPPYKINASGIQAPIGYKTIATSA 260
                 +P   +  G                    DD        G+Q          + 
Sbjct: 353 KVVTKTMPENNIHHG--------------------DD-----ELGGVQ----------NH 377

Query: 261 VHYNGILEYDAHSIYGFSQSIATHKAL-LGLEGKRPFILSRSTYVGSGKYA 310
            HY        H++YG   + +T++ + L  + KRPF+L+R+ ++GS +YA
Sbjct: 378 SHY--------HNVYGMLMARSTYEGMELADKNKRPFVLTRAGFIGSQRYA 420


>AT3G23640.1 | Symbols: HGL1 | heteroglycan glucosidase 1 |
           chr3:8502355-8509358 FORWARD LENGTH=991
          Length = 991

 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 138/291 (47%), Gaps = 55/291 (18%)

Query: 28  SPLNVVDQYTSLIGRPAPMPYWAFGFHQSRL-YHNLSVVEDVVENYKKALIPLDVIWK-- 84
           SP  V++  +  IG     P WA G+HQ R  Y +   V ++ + ++   IP DVIW   
Sbjct: 177 SPTAVLESLSHAIGTVFMPPKWALGYHQCRWSYMSDKRVAEIAQTFRDKKIPSDVIWMDI 236

Query: 85  --VSGYRDLTLNPTNYPRPKLLNFLNKIHSIGMKLVVIIDPGIAVNSSFGVYQRGIANDV 142
             + G+R  T +   +P P  L     +HS G K + ++DPGI     + VY  G  NDV
Sbjct: 237 DYMDGFRCFTFDKERFPDPSAL--AKDLHSNGFKAIWMLDPGIKQEEGYYVYDSGSKNDV 294

Query: 143 FI-KYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPG-DGLWLDMNEASNF 200
           +I + +G+P+  +VWPG   FPD+ N K  SWW + ++ F  +  G DG+W DMNE + F
Sbjct: 295 WISRADGKPFTGEVWPGPCVFPDYTNSKARSWWANLVKEF--VSNGVDGIWNDMNEPAVF 352

Query: 201 CSGKCKIPNGKVCSGTETSSVYCCLECENLNKTRWDDPPYKINASGIQAPIGYKTIATSA 260
                 +P   +  G                    DD        G+Q          + 
Sbjct: 353 KVVTKTMPENNIHHG--------------------DD-----ELGGVQ----------NH 377

Query: 261 VHYNGILEYDAHSIYGFSQSIATHKAL-LGLEGKRPFILSRSTYVGSGKYA 310
            HY        H++YG   + +T++ + L  + KRPF+L+R+ ++GS +YA
Sbjct: 378 SHY--------HNVYGMLMARSTYEGMELADKNKRPFVLTRAGFIGSQRYA 420


>AT5G63840.1 | Symbols: RSW3, PSL5 | Glycosyl hydrolases family 31
           protein | chr5:25545056-25548922 FORWARD LENGTH=921
          Length = 921

 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 128/305 (41%), Gaps = 61/305 (20%)

Query: 16  GGVFDFYLFSGPSPLNVVDQYTSLIGRPAPMPYWAFGFHQSRL-YHNLSVVEDVVENYKK 74
            G+ D + F GP P +VV QY S+ G  A    +A G+HQ R  Y +   V  V   + +
Sbjct: 329 AGIVDTFFFVGPEPKDVVKQYASVTGTSAMPQLFATGYHQCRWNYKDEEDVAQVDSKFDE 388

Query: 75  ALIPLDVIW----KVSGYRDLTLNPTNYPRPKLLNFLNKIHSIGMKLVVIIDPGIAVNSS 130
             IP DV+W       G R  T +   +P P+ +    K+ + G K+V I+DP I  + S
Sbjct: 389 HDIPYDVLWLDIEHTDGKRYFTWDSVLFPHPEEMQ--KKLAAKGRKMVTIVDPHIKRDDS 446

Query: 131 FGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEI--RRFHELVPG 187
           + +++       ++K   G+ +    WPG+ ++ D L+P+   WWG     + +    P 
Sbjct: 447 YFLHKEATQMGYYVKDSSGKDFDGWCWPGSSSYIDMLSPEIRKWWGGRFSYKNYVGSTPS 506

Query: 188 DGLWLDMNEASNFCSGKCKIPNGKVCSGTETSSVYCCLECENLNKTRWDDPPYKINASGI 247
              W DMNE S F   +  +P                                       
Sbjct: 507 LYTWNDMNEPSVFNGPEVTMPR-------------------------------------- 528

Query: 248 QAPIGYKTIATSAVHYNGILEYDAHSIYGFSQSIATHKAL-LGLEGK-RPFILSRSTYVG 305
                       A+H  G+   + H+ YG+   +AT   L +  EGK RPF+LSR+ + G
Sbjct: 529 -----------DALHVGGVEHREVHNAYGYYFHMATSDGLVMREEGKDRPFVLSRAIFPG 577

Query: 306 SGKYA 310
           + +Y 
Sbjct: 578 TQRYG 582