Miyakogusa Predicted Gene

Lj2g3v1141850.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1141850.1 Non Chatacterized Hit- tr|F6HFN6|F6HFN6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,62.26,0.00000002, ,CUFF.36420.1
         (126 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G25330.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    45   9e-06

>AT1G25330.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:8880515-8882018 REVERSE
           LENGTH=223
          Length = 223

 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 20/26 (76%), Positives = 24/26 (92%)

Query: 87  EKQNEVIHVRAKRGQATNSHSLAERV 112
           +K  +V+HVRAKRGQAT+SHSLAERV
Sbjct: 96  QKPKDVVHVRAKRGQATDSHSLAERV 121